Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004683

Physical Location & Seq

Genomic Coordinates Reverse (-)

70540705 .. 70542719

Gene Structure 2015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG508500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGTGCGCGTCTCTCTCTGTTCTGTTCAATTCAACTCTCTGTCTCTCACTGTGCCTAACTGATCAATATCATCAAATTCGAGATTCGTGCAGTTCAATCACTTTAGACAATTACATAAATAAACCCCCCCCCCCTCTCCAAATCCCCATGTCATTCCTTCAGGATCTTTGGCTCTTCCTCGCCCCTCCGGATTTCCCACACAAACTCTCAGACTCCTTCTTACAGTCCATGGCCACCTCCGCCGCCTGCGACGCCGCCGAGTCGGATTCCTGCCGGGACGACGCGGAGGCGCTCAATCTCAAATTCGTCGCCATCGCTTCCATTCTCCTCGCCGGAGTGATCGGAATTGCCATTCCTCTGGTCGGGAAGAACCGGAGGGTTCTCCGCACGGACGGCAGCCTCTTCGTCGGAGCGAAAGCCTTCGCCGCCGGCGTCATTCTCGCCACCGGATTCGTGCACATGCTCTCCGGCGGTTCCGACGCGCTTAACAGCCCGTGCCTGCCGGAGTTTCCATGGTCGAAGTTCCCCTTCTCTGGATTCTTCGCCATGATGGCATCGCTTGCCACCTTGCTCGTTGACTTCGTGGGCACCCAGTACTACGAGCGCAAACAGGGCCTGGCCCGGCCCACCGAGGACCAAGTTCGAGTCGGGTCGGACGGTCTCGAGTCGGGTATTGTCTCGCCCCAAAAGGAATCGAATGGCACGATTTTTGGGGAAGAGGAAGGCGGTCGTGGGATGCACATTGTGGGAATGCATGCCCACGCGGCGCACCATCGACACAGCCACCCTCAGGACGCATGTGACGGGCACGTGACCGAACCGGGTCATGTGGATTCGGGTCACGCCCACGGGCATGGCCATTCCCACGGCTTCGGTGATGATGACGAGGATACTGGTGTCCGCCACGTCGTCGTTTCACAGATTTTGGAACTTGGGATTGTATCACATTCTGTGATCATTGGGTTGTCACTGGGAGTGTCACAGAGCCCATGTACCATAAGGCCCTTAGTTGCAGCACTGTCCTTCCATCAGTTCTTTGAAGGTTTTGCACTTGGAGGCTGCATATCACAAGCCCAATTCAGGAACCGATCTGCAGCGATAATGGCTTGTTTTTTCGCCATAACAACTCCACTAGGTATTGGTGTTGGGATCGCAATTTCTTCATCCTACAACCCGAACAGTGCAGGAGCTCTGGTCACTGAAGGCATCTTGGATTCCATGTCTGCTGGTATTCTGGTCTACATGGCCTTGGTGGACCTAATTGCTGCTGACTTTCTGAGCAAGAGGATGAGCTGCAATTTTCGGCTTCAAATTCTGTCTTATTGCTTGCTATTTCTTGGAGCTGGGTCGATGTCTTTGCTTGCAATTTGGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006829 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0010035 GO:0010038 GO:0010043 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0034220 GO:0034755 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0070838 GO:0071577 GO:0071944 GO:0072509 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zip

Protein Analysis

458

Amino Acids

48.73

Weight (kDa)

5.66

Isoelectric Point (pI)

50.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zip	PF02535	99 - 455	2.8e-78	ZIP Zinc transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10970 AT1G10970 AT1G60960 AT1G60960 AT1G60960 AT4G33020 AT4G33020
fragaria_vesca	FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850
malus_domestica	MD08G1061900.v1.1 MD15G1059800.v1.1
prunus_persica	Prupe.1G411700_v2.0.a1
pyrus_communis	pycom08g05140 pycom15g05610
rosa_chinensis	RchiOBHm_Chr6g0310941
rosa_laevigata	RLG00000010448
rosa_multiflora	Rmu_sc0035061.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158150
rosa_rugosa	Rorug06G0384300 Rorug06G0384400
rosa_samantha	Rh6AG498100 Rh6BG508500 Rh6CG514400 Rh6DG500900
rosa_wichuraiana	Rw6G043380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	587
AccI	GTMKAC	1 cut(s)	1239
AccII	CGCG	4 cut(s)	8, 284, 482, 764
AccIII	TCCGGA	1 cut(s)	187
AclWI	GGATC	2 cut(s)	171, 1157
AcoI	YGGCCR	2 cut(s)	231, 856
AcsI	RAATTY	3 cut(s)	75, 302, 1311
AcuI	CTGAAG	2 cut(s)	143, 1221
AcvI	CACGTG	1 cut(s)	811
AcyI	GRCGYC	2 cut(s)	252, 432
AdeI	CACNNNGTG	1 cut(s)	745
AfaI	GTAC	2 cut(s)	596, 994
AfiI	CCNNNNNNNGG	4 cut(s)	362, 533, 790, 1080
AgsI	TTSAA	5 cut(s)	28, 33, 96, 1040, 1310
AjiI	CACGTC	1 cut(s)	907
AjnI	CCWGG	1 cut(s)	615
AluBI	AGCT	3 cut(s)	1190, 1293, 1343
AluI	AGCT	3 cut(s)	1190, 1293, 1343
Alw21I	GWGCWC	2 cut(s)	459, 1192
Alw26I	GTCTC	4 cut(s)	15, 47, 665, 682
Alw44I	GTGCAC	1 cut(s)	455
AlwI	GGATC	2 cut(s)	171, 1157
AlwNI	CAGNNNCTG	1 cut(s)	616
Ama87I	CYCGRG	1 cut(s)	662
Aor13HI	TCCGGA	1 cut(s)	187
AoxI	GGCC	7 cut(s)	231, 613, 618, 623, 856, 1001, 1245
ApaLI	GTGCAC	1 cut(s)	455
ApeKI	GCWGC	6 cut(s)	396, 1013, 1059, 1094, 1265, 1293
ApoI	RAATTY	3 cut(s)	75, 302, 1311
Asp700I	GAANNNNTTC	1 cut(s)	419
AspLEI	GCGC	5 cut(s)	8, 292, 484, 606, 769
AspS9I	GGNCC	6 cut(s)	613, 619, 624, 634, 1002, 1255
AsuC2I	CCSGG	3 cut(s)	275, 622, 822
AsuHPI	GGTGA	1 cut(s)	887
AvaI	CYCGRG	1 cut(s)	662
AvaII	GGWCC	2 cut(s)	634, 1255
AxyI	CCTNAGG	1 cut(s)	789
BaeGI	GKGCMC	3 cut(s)	459, 590, 810
BaeI	ACNNNNGTAYC	2 cut(s)	882, 915
BalI	TGGCCA	2 cut(s)	233, 858
BanI	GGYRCC	1 cut(s)	587
BanII	GRGCYC	2 cut(s)	989, 1192
BbrPI	CACGTG	1 cut(s)	811
Bbv12I	GWGCWC	2 cut(s)	459, 1192
BbvI	GCAGC	6 cut(s)	408, 1025, 1046, 1106, 1252, 1280
BccI	CCATC	4 cut(s)	320, 544, 780, 1035
BceAI	ACGGC	2 cut(s)	409, 883
BcgI	CGANNNNNNTGC	6 cut(s)	69, 103, 385, 419, 1339, 1373
BciT130I	CCWGG	1 cut(s)	617
BciVI	GTATCC	1 cut(s)	883
BclI	TGATCA	2 cut(s)	61, 954
BcnI	CCSGG	3 cut(s)	275, 622, 822
BcoDI	GTCTC	4 cut(s)	15, 47, 665, 682
BfaI	CTAG	1 cut(s)	1133
BfmI	CTRYAG	1 cut(s)	1092
BfoI	RGCGCY	1 cut(s)	293
BfuI	GTATCC	1 cut(s)	883
BglI	GCCNNNNNGGC	2 cut(s)	551, 764
BmcAI	AGTACT	1 cut(s)	596
Bme1390I	CCNGG	4 cut(s)	275, 617, 622, 822
Bme18I	GGWCC	2 cut(s)	634, 1255
BmeT110I	CYCGRG	1 cut(s)	662
BmgBI	CACGTC	1 cut(s)	907
BmgT120I	GGNCC	6 cut(s)	613, 619, 624, 634, 1002, 1255
BmiI	GGNNCC	3 cut(s)	475, 589, 1085
BmrFI	CCNGG	4 cut(s)	275, 617, 622, 822
BmrI	ACTGGG	2 cut(s)	586, 980
BmsI	GCATC	3 cut(s)	563, 726, 1215
BmuI	ACTGGG	2 cut(s)	586, 980
BpuMI	CCSGG	3 cut(s)	275, 622, 822
BsaAI	YACGTR	1 cut(s)	811
BsaBI	GATNNNNATC	1 cut(s)	66
BsaHI	GRCGYC	2 cut(s)	252, 432
BsaI	GGTCTC	1 cut(s)	665
BsaJI	CCNNGG	6 cut(s)	228, 512, 630, 847, 865, 1248
BsaWI	WCCGGW	3 cut(s)	187, 372, 446
BsaXI	ACNNNNNCTCC	4 cut(s)	449, 479, 1179, 1209
Bsc4I	CCNNNNNNNGG	4 cut(s)	362, 533, 790, 1080
Bse118I	RCCGGY	1 cut(s)	428
Bse1I	ACTGG	3 cut(s)	592, 898, 975
Bse21I	CCTNAGG	1 cut(s)	789
Bse8I	GATNNNNATC	1 cut(s)	66
BseAI	TCCGGA	1 cut(s)	187
BseBI	CCWGG	1 cut(s)	617
BseDI	CCNNGG	6 cut(s)	228, 512, 630, 847, 865, 1248
BseGI	GGATG	3 cut(s)	741, 1163, 1293
BseJI	GATNNNNATC	1 cut(s)	66
BseLI	CCNNNNNNNGG	4 cut(s)	362, 533, 790, 1080
BseMII	CTCAG	3 cut(s)	222, 803, 1268
BseNI	ACTGG	3 cut(s)	592, 898, 975
BseRI	GAGGAG	1 cut(s)	317
BseSI	GKGCMC	3 cut(s)	459, 590, 810
BseXI	GCAGC	6 cut(s)	408, 1025, 1046, 1106, 1252, 1280
BseYI	CCCAGC	1 cut(s)	1343
BsgI	GTGCAG	2 cut(s)	109, 1203
Bsh1236I	CGCG	4 cut(s)	8, 284, 482, 764
Bsh1285I	CGRYCG	1 cut(s)	730
BshFI	GGCC	7 cut(s)	233, 615, 620, 625, 858, 1003, 1247
BshNI	GGYRCC	1 cut(s)	587
BsiEI	CGRYCG	1 cut(s)	730
BsiHKAI	GWGCWC	2 cut(s)	459, 1192
BsiHKCI	CYCGRG	1 cut(s)	662
BslFI	GGGAC	1 cut(s)	290
BslI	CCNNNNNNNGG	4 cut(s)	362, 533, 790, 1080
BsmAI	GTCTC	4 cut(s)	15, 47, 665, 682
BsmBI	CGTCTC	1 cut(s)	15
BsmFI	GGGAC	1 cut(s)	290
BsmI	GAATGC	1 cut(s)	756
BsnI	GGCC	7 cut(s)	233, 615, 620, 625, 858, 1003, 1247
Bso31I	GGTCTC	1 cut(s)	665
BsoBI	CYCGRG	1 cut(s)	662
Bsp1286I	GDGCHC	5 cut(s)	459, 590, 810, 989, 1192
Bsp13I	TCCGGA	1 cut(s)	187
Bsp143I	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
Bsp19I	CCATGG	2 cut(s)	228, 512
BspANI	GGCC	7 cut(s)	233, 615, 620, 625, 858, 1003, 1247
BspCNI	CTCAG	3 cut(s)	221, 802, 1269
BspEI	TCCGGA	1 cut(s)	187
BspFNI	CGCG	4 cut(s)	8, 284, 482, 764
BspLI	GGNNCC	3 cut(s)	475, 589, 1085
BspMAI	CTGCAG	1 cut(s)	1096
BspPI	GGATC	2 cut(s)	171, 1157
BspQI	GCTCTTC	1 cut(s)	179
BspT107I	GGYRCC	1 cut(s)	587
BspTNI	GGTCTC	1 cut(s)	665
BsrFI	RCCGGY	1 cut(s)	428
BsrI	ACTGG	3 cut(s)	592, 898, 975
BssAI	RCCGGY	1 cut(s)	428
BssECI	CCNNGG	6 cut(s)	228, 512, 630, 847, 865, 1248
BssMI	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
BssNI	GRCGYC	2 cut(s)	252, 432
BssT1I	CCWWGG	3 cut(s)	228, 512, 1248
Bst2UI	CCWGG	1 cut(s)	617
Bst4CI	ACNGT	5 cut(s)	51, 225, 659, 1020, 1181
Bst6I	CTCTTC	3 cut(s)	179, 407, 711
BstACI	GRCGYC	2 cut(s)	252, 432
BstAPI	GCANNNNNTGC	1 cut(s)	560
BstBAI	YACGTR	1 cut(s)	811
BstC8I	GCNNGC	7 cut(s)	247, 430, 500, 561, 756, 1328, 1362
BstDEI	CTNAG	5 cut(s)	208, 789, 1006, 1277, 1374
BstDSI	CCRYGG	4 cut(s)	228, 512, 847, 865
BstF5I	GGATG	3 cut(s)	741, 1163, 1293
BstFNI	CGCG	4 cut(s)	8, 284, 482, 764
BstH2I	RGCGCY	1 cut(s)	293
BstHHI	GCGC	5 cut(s)	8, 292, 484, 606, 769
BstKTI	GATC	6 cut(s)	64, 166, 342, 957, 1091, 1152
BstMAI	GTCTC	4 cut(s)	15, 47, 665, 682
BstMBI	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
BstMCI	CGRYCG	1 cut(s)	730
BstNI	CCWGG	1 cut(s)	617
BstNSI	RCATGY	3 cut(s)	463, 758, 801
BstSCI	CCNGG	4 cut(s)	273, 615, 620, 820
BstSFI	CTRYAG	1 cut(s)	1092
BstSLI	GKGCMC	3 cut(s)	459, 590, 810
BstUI	CGCG	4 cut(s)	8, 284, 482, 764
BstV1I	GCAGC	6 cut(s)	408, 1025, 1046, 1106, 1252, 1280
BstX2I	RGATCY	1 cut(s)	163
BstXI	CCANNNNNNTGG	2 cut(s)	358, 854
BstYI	RGATCY	1 cut(s)	163
Bsu36I	CCTNAGG	1 cut(s)	789
BsuI	GTATCC	1 cut(s)	883
BsuRI	GGCC	7 cut(s)	233, 615, 620, 625, 858, 1003, 1247
BtgI	CCRYGG	4 cut(s)	228, 512, 847, 865
BtgZI	GCGATG	2 cut(s)	298, 540
BtrI	CACGTC	1 cut(s)	907
BtsCI	GGATG	3 cut(s)	741, 1163, 1293
BtsIMutI	CAGTG	5 cut(s)	47, 968, 1016, 1186, 1197
Cac8I	GCNNGC	7 cut(s)	247, 430, 500, 561, 756, 1328, 1362
CaiI	CAGNNNCTG	1 cut(s)	616
CfoI	GCGC	5 cut(s)	8, 292, 484, 606, 769
Cfr10I	RCCGGY	1 cut(s)	428
Cfr13I	GGNCC	6 cut(s)	613, 619, 624, 634, 1002, 1255
CseI	GACGC	5 cut(s)	260, 290, 421, 488, 803
Csp6I	GTAC	2 cut(s)	595, 993
CviQI	GTAC	2 cut(s)	595, 993
DdeI	CTNAG	5 cut(s)	208, 789, 1006, 1277, 1374
DpnI	GATC	6 cut(s)	63, 165, 341, 956, 1090, 1151
DpnII	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
DraIII	CACNNNGTG	1 cut(s)	745
EaeI	YGGCCR	2 cut(s)	231, 856
Eam1104I	CTCTTC	3 cut(s)	179, 407, 711
EarI	CTCTTC	3 cut(s)	179, 407, 711
EciI	GGCGGA	2 cut(s)	229, 890
Ecl136II	GAGCTC	1 cut(s)	1190
Eco130I	CCWWGG	3 cut(s)	228, 512, 1248
Eco24I	GRGCYC	2 cut(s)	989, 1192
Eco31I	GGTCTC	1 cut(s)	665
Eco47I	GGWCC	2 cut(s)	634, 1255
Eco53kI	GAGCTC	1 cut(s)	1190
Eco57I	CTGAAG	2 cut(s)	143, 1221
Eco72I	CACGTG	1 cut(s)	811
Eco81I	CCTNAGG	1 cut(s)	789
Eco88I	CYCGRG	1 cut(s)	662
EcoICRI	GAGCTC	1 cut(s)	1190
EcoO109I	RGGNCCY	2 cut(s)	613, 1002
EcoRII	CCWGG	1 cut(s)	615
EcoT14I	CCWWGG	3 cut(s)	228, 512, 1248
EcoT22I	ATGCAT	1 cut(s)	756
EcoT38I	GRGCYC	2 cut(s)	989, 1192
ErhI	CCWWGG	3 cut(s)	228, 512, 1248
Esp3I	CGTCTC	1 cut(s)	15
FalI	AAGNNNNNCTT	2 cut(s)	512, 544
FaqI	GGGAC	1 cut(s)	290
FbaI	TGATCA	2 cut(s)	61, 954
FblI	GTMKAC	1 cut(s)	1239
FokI	GGATG	3 cut(s)	748, 1150, 1300
FriOI	GRGCYC	2 cut(s)	989, 1192
FspBI	CTAG	1 cut(s)	1133
GlaI	GCGC	5 cut(s)	7, 291, 483, 605, 768
GsaI	CCCAGC	1 cut(s)	1347
HaeII	RGCGCY	1 cut(s)	293
HaeIII	GGCC	7 cut(s)	233, 615, 620, 625, 858, 1003, 1247
HgaI	GACGC	5 cut(s)	260, 290, 421, 488, 803
HhaI	GCGC	5 cut(s)	8, 292, 484, 606, 769
Hin1I	GRCGYC	2 cut(s)	252, 432
Hin6I	GCGC	5 cut(s)	6, 290, 482, 604, 767
HinP1I	GCGC	5 cut(s)	6, 290, 482, 604, 767
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HphI	GGTGA	1 cut(s)	887
Hpy166II	GTNNAC	4 cut(s)	457, 577, 1240, 1255
Hpy188I	TCNGA	7 cut(s)	211, 265, 344, 410, 478, 655, 1278
Hpy188III	TCNNGA	8 cut(s)	80, 161, 188, 364, 534, 662, 791, 1081
Hpy8I	GTNNAC	4 cut(s)	457, 577, 1240, 1255
Hpy99I	CGWCG	7 cut(s)	254, 284, 311, 410, 482, 911, 914
HpyAV	CCTTC	8 cut(s)	167, 226, 430, 538, 716, 1033, 1034, 1196
HpyCH4III	ACNGT	5 cut(s)	51, 225, 659, 1020, 1181
HpyCH4IV	ACGT	2 cut(s)	810, 906
HpyF3I	CTNAG	5 cut(s)	208, 789, 1006, 1277, 1374
HpySE526I	ACGT	2 cut(s)	810, 906
Hsp92I	GRCGYC	2 cut(s)	252, 432
HspAI	GCGC	5 cut(s)	6, 290, 482, 604, 767
Kpn2I	TCCGGA	1 cut(s)	187
KroI	GCCGGC	1 cut(s)	428
KroNI	GCCGGC	1 cut(s)	430
Ksp22I	TGATCA	2 cut(s)	61, 954
Kzo9I	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
LguI	GCTCTTC	1 cut(s)	179
LmnI	GCTCC	3 cut(s)	410, 1187, 1340
Lsp1109I	GCAGC	6 cut(s)	408, 1025, 1046, 1106, 1252, 1280
LweI	GCATC	3 cut(s)	563, 726, 1215
MaeI	CTAG	1 cut(s)	1133
MaeII	ACGT	2 cut(s)	810, 906
MaeIII	GTNAC	6 cut(s)	800, 811, 839, 966, 978, 1195
MalI	GATC	6 cut(s)	63, 165, 341, 956, 1090, 1151
MboI	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
MboII	GAAGA	6 cut(s)	166, 379, 394, 532, 728, 1152
MflI	RGATCY	1 cut(s)	163
MhlI	GDGCHC	5 cut(s)	459, 590, 810, 989, 1192
MlsI	TGGCCA	2 cut(s)	233, 858
MluNI	TGGCCA	2 cut(s)	233, 858
MlyI	GAGTC	4 cut(s)	206, 269, 654, 674
MmeI	TCCRAC	4 cut(s)	243, 388, 501, 633
Mox20I	TGGCCA	2 cut(s)	233, 858
Mph1103I	ATGCAT	1 cut(s)	756
MreI	CGCCGGCG	1 cut(s)	428
MroI	TCCGGA	1 cut(s)	187
MroNI	GCCGGC	1 cut(s)	428
MroXI	GAANNNNTTC	1 cut(s)	419
MscI	TGGCCA	2 cut(s)	233, 858
MseI	TTAA	1 cut(s)	486
MslI	CAYNNNNRTG	1 cut(s)	852
Msp20I	TGGCCA	2 cut(s)	233, 858
MspR9I	CCNGG	4 cut(s)	275, 617, 622, 822
Mva1269I	GAATGC	1 cut(s)	756
MvaI	CCWGG	1 cut(s)	617
MvnI	CGCG	4 cut(s)	8, 284, 482, 764
NaeI	GCCGGC	1 cut(s)	430
NciI	CCSGG	3 cut(s)	275, 622, 822
NcoI	CCATGG	2 cut(s)	228, 512
NdeII	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
NgoMIV	GCCGGC	1 cut(s)	428
NlaIV	GGNNCC	3 cut(s)	475, 589, 1085
NmeAIII	GCCGAG	1 cut(s)	283
NmuCI	GTSAC	6 cut(s)	800, 811, 839, 966, 978, 1195
NsiI	ATGCAT	1 cut(s)	756
NspI	RCATGY	3 cut(s)	463, 758, 801
PaeI	GCATGC	1 cut(s)	758
PaeR7I	CTCGAG	1 cut(s)	662
PciSI	GCTCTTC	1 cut(s)	179
PcsI	WCGNNNNNNNCGW	3 cut(s)	429, 579, 701
PctI	GAATGC	1 cut(s)	756
PdiI	GCCGGC	1 cut(s)	430
PdmI	GAANNNNTTC	1 cut(s)	419
PfeI	GAWTC	7 cut(s)	83, 266, 450, 537, 692, 833, 1214
PleI	GAGTC	4 cut(s)	206, 268, 653, 673
PmaCI	CACGTG	1 cut(s)	811
PmlI	CACGTG	1 cut(s)	811
PpsI	GAGTC	4 cut(s)	206, 268, 653, 673
Ppu21I	YACGTR	1 cut(s)	811
Psp124BI	GAGCTC	1 cut(s)	1192
Psp6I	CCWGG	1 cut(s)	615
PspCI	CACGTG	1 cut(s)	811
PspFI	CCCAGC	1 cut(s)	1343
PspGI	CCWGG	1 cut(s)	615
PspN4I	GGNNCC	3 cut(s)	475, 589, 1085
PspPI	GGNCC	6 cut(s)	613, 619, 624, 634, 1002, 1255
PstI	CTGCAG	1 cut(s)	1096
PstNI	CAGNNNCTG	1 cut(s)	616
PsuI	RGATCY	1 cut(s)	163
RsaI	GTAC	2 cut(s)	596, 994
RsaNI	GTAC	2 cut(s)	595, 993
RseI	CAYNNNNRTG	1 cut(s)	852
SacI	GAGCTC	1 cut(s)	1192
SapI	GCTCTTC	1 cut(s)	179
SaqAI	TTAA	1 cut(s)	486
Sau3AI	GATC	6 cut(s)	61, 163, 339, 954, 1088, 1149
Sau96I	GGNCC	6 cut(s)	613, 619, 624, 634, 1002, 1255
ScaI	AGTACT	1 cut(s)	596
SchI	GAGTC	4 cut(s)	206, 269, 654, 674
ScrFI	CCNGG	4 cut(s)	275, 617, 622, 822
SduI	GDGCHC	5 cut(s)	459, 590, 810, 989, 1192
SfaNI	GCATC	3 cut(s)	563, 726, 1215
SfcI	CTRYAG	1 cut(s)	1092
Sfr274I	CTCGAG	1 cut(s)	662
SgrAI	CRCCGGYG	1 cut(s)	428
SinI	GGWCC	2 cut(s)	634, 1255
SlaI	CTCGAG	1 cut(s)	662
SmiMI	CAYNNNNRTG	1 cut(s)	852
SmlI	CTYRAG	1 cut(s)	662
SmoI	CTYRAG	1 cut(s)	662
SphI	GCATGC	1 cut(s)	758
SspMI	CTAG	1 cut(s)	1133
SstI	GAGCTC	1 cut(s)	1192
StyD4I	CCNGG	4 cut(s)	273, 615, 620, 820
StyI	CCWWGG	3 cut(s)	228, 512, 1248
TaaI	ACNGT	5 cut(s)	51, 225, 659, 1020, 1181
TaiI	ACGT	2 cut(s)	813, 909
TaqI	TCGA	7 cut(s)	79, 518, 643, 663, 695, 775, 1349
TaqII	GACCGA	1 cut(s)	830
TatI	WGTACW	1 cut(s)	594
TauI	GCSGC	4 cut(s)	245, 257, 428, 767
TfiI	GAWTC	7 cut(s)	83, 266, 450, 537, 692, 833, 1214
Tru1I	TTAA	1 cut(s)	486
Tru9I	TTAA	1 cut(s)	486
TscAI	CASTG	5 cut(s)	54, 975, 1023, 1186, 1204
TseFI	GTSAC	6 cut(s)	800, 811, 839, 966, 978, 1195
TseI	GCWGC	6 cut(s)	396, 1013, 1059, 1094, 1265, 1293
Tsp45I	GTSAC	6 cut(s)	800, 811, 839, 966, 978, 1195
TspDTI	ATGAA	1 cut(s)	1152
TspGWI	ACGGA	1 cut(s)	404
TspRI	CASTG	5 cut(s)	54, 975, 1023, 1186, 1204
VneI	GTGCAC	1 cut(s)	455
VpaK11BI	GGWCC	2 cut(s)	634, 1255
XapI	RAATTY	3 cut(s)	75, 302, 1311
XceI	RCATGY	3 cut(s)	463, 758, 801
XhoI	CTCGAG	1 cut(s)	662
XmiI	GTMKAC	1 cut(s)	1239
XmnI	GAANNNNTTC	1 cut(s)	419
XspI	CTAG	1 cut(s)	1133
ZrmI	AGTACT	1 cut(s)	596
Zsp2I	ATGCAT	1 cut(s)	756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.