Rorug06G0384400

Zinc transporter 4

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
52990957 .. 52993582
2626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0384400.1

Sequence Viewer

Length: 363 bp
ATGGGAACTTTTGGATACTTAGCTCCTGAATATGCATCCAGTGGAAAGCTCAGTGATAAATCAGATGTCTTCTCATTCGGGGTTGTGCTATTGGAGTTGATTACTGGACGCCAACCCATTGATAAAACTCATTCCTTCACTGATGATAGCATGGTTGAGTGGGCAAGGCCTTTGCTTGCGCAAGCATTGGAAAAGGGAAACTTTGATGGTCTTGTTGATGCAAGGTTGCAGAATGATTACAACTCCAGCGAAATGGCTTGTATGGTTGCCAGCGCTGCTGCTTGTGTGCGTCATTCTGCCTGCCGTCGGCCAAGAATGAGCCAGGGTAGTTCGAGGTTTGGAAGGCAATCTTTCTCCAGATGA

Protein Analysis

120

Amino Acids

13.19

Weight (kDa)

7.74

Isoelectric Point (pI)

56.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 45 3e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 45 1.1e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 180
AcoI YGGCCR 1 cut(s) 308
AcyI GRCGYC 1 cut(s) 109
AfeI AGCGCT 1 cut(s) 274
AfiI CCNNNNNNNGG 1 cut(s) 306
AjnI CCWGG 1 cut(s) 321
AluBI AGCT 2 cut(s) 23, 49
AluI AGCT 2 cut(s) 23, 49
Aor51HI AGCGCT 1 cut(s) 274
AoxI GGCC 2 cut(s) 167, 308
ApeKI GCWGC 2 cut(s) 275, 278
AspLEI GCGC 2 cut(s) 181, 275
BbsI GAAGAC 1 cut(s) 61
BbvI GCAGC 2 cut(s) 262, 265
BccI CCATC 1 cut(s) 200
BceAI ACGGC 1 cut(s) 288
BciT130I CCWGG 1 cut(s) 323
BciVI GTATCC 1 cut(s) 8
BfoI RGCGCY 1 cut(s) 276
BfuI GTATCC 1 cut(s) 8
BisI GCNGC 2 cut(s) 276, 279
BlsI GCNGC 2 cut(s) 277, 280
Bme1390I CCNGG 1 cut(s) 323
BmrFI CCNGG 1 cut(s) 323
BmsI GCATC 2 cut(s) 44, 208
BpiI GAAGAC 1 cut(s) 61
BpmI CTGGAG 2 cut(s) 229, 340
BsaHI GRCGYC 1 cut(s) 109
BsaJI CCNNGG 1 cut(s) 322
Bsc4I CCNNNNNNNGG 1 cut(s) 306
Bse1I ACTGG 2 cut(s) 39, 109
BseBI CCWGG 1 cut(s) 323
BseDI CCNNGG 1 cut(s) 322
BseGI GGATG 1 cut(s) 35
BseLI CCNNNNNNNGG 1 cut(s) 306
BseMII CTCAG 1 cut(s) 64
BseNI ACTGG 2 cut(s) 39, 109
BseXI GCAGC 2 cut(s) 262, 265
BshFI GGCC 2 cut(s) 169, 310
BslI CCNNNNNNNGG 1 cut(s) 306
BsnI GGCC 2 cut(s) 169, 310
BspANI GGCC 2 cut(s) 169, 310
BspCNI CTCAG 1 cut(s) 63
BsrI ACTGG 2 cut(s) 39, 109
BssECI CCNNGG 1 cut(s) 322
BssNI GRCGYC 1 cut(s) 109
Bst2UI CCWGG 1 cut(s) 323
BstACI GRCGYC 1 cut(s) 109
BstC8I GCNNGC 4 cut(s) 177, 183, 271, 301
BstDEI CTNAG 2 cut(s) 19, 50
BstF5I GGATG 1 cut(s) 35
BstH2I RGCGCY 1 cut(s) 276
BstHHI GCGC 2 cut(s) 181, 275
BstMWI GCNNNNNNNGC 1 cut(s) 275
BstNI CCWGG 1 cut(s) 323
BstSCI CCNGG 1 cut(s) 321
BstV1I GCAGC 2 cut(s) 262, 265
BstV2I GAAGAC 1 cut(s) 61
BstXI CCANNNNNNTGG 1 cut(s) 253
BsuI GTATCC 1 cut(s) 8
BsuRI GGCC 2 cut(s) 169, 310
BtsCI GGATG 1 cut(s) 35
BtsIMutI CAGTG 3 cut(s) 46, 58, 138
Cac8I GCNNGC 4 cut(s) 177, 183, 271, 301
CfoI GCGC 2 cut(s) 181, 275
CseI GACGC 2 cut(s) 117, 278
CviAII CATG 1 cut(s) 151
CviJI RGCY 6 cut(s) 23, 49, 169, 257, 310, 321
CviKI_1 RGCY 6 cut(s) 23, 49, 169, 257, 310, 321
DdeI CTNAG 2 cut(s) 19, 50
EaeI YGGCCR 1 cut(s) 308
Eco147I AGGCCT 1 cut(s) 169
Eco47III AGCGCT 1 cut(s) 274
EcoRII CCWGG 1 cut(s) 321
EcoT22I ATGCAT 1 cut(s) 37
FaeI CATG 1 cut(s) 154
FaiI YATR 3 cut(s) 33, 152, 263
FalI AAGNNNNNCTT 3 cut(s) 185, 217, 334
FatI CATG 1 cut(s) 150
Fnu4HI GCNGC 2 cut(s) 276, 279
FokI GGATG 1 cut(s) 22
Fsp4HI GCNGC 2 cut(s) 276, 279
FspI TGCGCA 1 cut(s) 180
GlaI GCGC 2 cut(s) 180, 274
GluI GCNGC 2 cut(s) 276, 279
GsuI CTGGAG 2 cut(s) 229, 340
HaeII RGCGCY 1 cut(s) 276
HaeIII GGCC 2 cut(s) 169, 310
HgaI GACGC 2 cut(s) 117, 278
HhaI GCGC 2 cut(s) 181, 275
Hin1I GRCGYC 1 cut(s) 109
Hin1II CATG 1 cut(s) 154
Hin6I GCGC 2 cut(s) 179, 273
HinP1I GCGC 2 cut(s) 179, 273
Hpy188I TCNGA 1 cut(s) 64
Hpy188III TCNNGA 2 cut(s) 26, 357
Hpy99I CGWCG 1 cut(s) 309
HpyAV CCTTC 2 cut(s) 145, 336
HpyCH4V TGCA 3 cut(s) 35, 221, 229
HpyF10VI GCNNNNNNNGC 1 cut(s) 275
HpyF3I CTNAG 2 cut(s) 19, 50
Hsp92I GRCGYC 1 cut(s) 109
Hsp92II CATG 1 cut(s) 154
HspAI GCGC 2 cut(s) 179, 273
LmnI GCTCC 1 cut(s) 28
LpnPI CCDG 8 cut(s) 39, 52, 90, 259, 283, 308, 313, 335
Lsp1109I GCAGC 2 cut(s) 262, 265
LweI GCATC 2 cut(s) 44, 208
MboII GAAGA 1 cut(s) 61
MnlI CCTC 1 cut(s) 327
Mph1103I ATGCAT 1 cut(s) 37
MspR9I CCNGG 1 cut(s) 323
MvaI CCWGG 1 cut(s) 323
MwoI GCNNNNNNNGC 1 cut(s) 275
NlaIII CATG 1 cut(s) 154
NsbI TGCGCA 1 cut(s) 180
NsiI ATGCAT 1 cut(s) 37
PceI AGGCCT 1 cut(s) 169
PkrI GCNGC 2 cut(s) 277, 280
Psp6I CCWGG 1 cut(s) 321
PspGI CCWGG 1 cut(s) 321
SatI GCNGC 2 cut(s) 276, 279
ScrFI CCNGG 1 cut(s) 323
SetI ASST 4 cut(s) 25, 51, 227, 338
SfaNI GCATC 2 cut(s) 44, 208
SseBI AGGCCT 1 cut(s) 169
StuI AGGCCT 1 cut(s) 169
StyD4I CCNGG 1 cut(s) 321
TaqI TCGA 1 cut(s) 332
TscAI CASTG 3 cut(s) 46, 58, 145
TseI GCWGC 2 cut(s) 275, 278
TspRI CASTG 3 cut(s) 46, 58, 145
Zsp2I ATGCAT 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.