FvH4_2g31850

Zinc transporter 4

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
24311521 .. 24313930
2410 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g31850.t6

Sequence Viewer

Length: 1164 bp
ATGGCGACCTCCGCCGCCTGCGAAACCGGCGAGTCGGATTCCTGCCGCGACGAGTCGTCGGCGCTTAATCTCAAGTTCGTCGCCATCGCTTCTATCCTTCTCGCCGGAGTCGTCGGAATCGCCATTCCTTTGATCGGGAAGAACCGGAGGTTTCTCCGCACCGACGGCAGCCTCTTCGTCGGAGCGAAGGCCTTCGCCGCCGGGGTTATTCTGGCGACGGGGTTCGTGCACATGCTCTCCGGCGGTTCGGACGCGCTGAACAGCCCGTGCCTGCCGGAGTTTCCGTGGTCCAAGTTCCCATTCTCTGGATTCTTCGCCATGATGGCATCTCTTGCCACCTTGCTCGTTGACTTCGTGGGCACGCAGTACTACGAACGCAAACAGGGCCTGGCCCGGCCCAGCGAGGCCCAAGTGAGGGTCGGGTCGGATGACTCGGGTCTGGAGACGGGTATATTCCCGGCCCACAAGGAAGGGAATGGGATGATGATTTTTGGGGAGGAAGAAGGCGGTGGGATGCACATTGTCGGAATGCATGCCCACGCGGCGCACCATGGACACAACCACGCTCAGGACGCGTGTGACGGCCACGTGGCCGAACCGGGTTTGGGTCATGATCACGGGCACGGGCACGCCCATGGGCATGGGCATTCTCACGGGTTCGGTGATGATGACGAGGATGATGGTGTGCGGCACGTCGTTGTTTCTCAGATTTTGGAACTTGGGATTGTATCACATTCTGTGATCATTGGGTTGTCATTAGGAGTGTCACAGAGCCCATGTACCATAAGGCCCTTAGTTGCAGCATTGTCCTTCCATCAGTTCTTTGAAGGTTTTGCACTTGGAGGCTGCATATCACAAGCCCAATTCAGGAACCGATCTGCGGCCATAATGGCTTGTTTTTTCGCCATAACAACTCCACTAGGTATTGGTGTTGGGATCGGAGTTTCTTCAATCTACAACCCGAACAGTCCAGGAGCTCTGGTCACTGAAGGCATTTTGGATTCCATGTCTGCTGGTATTCTGGTCTACATGGCCTTGGTCGATCTGATTGCTGCTGACTTTCTGAGTAAGAGGATGAGCTGCAATTTCCGGCTTCAAATTGTGTCTTACTGCTTGCTATTTCTTGGAGCTGGGATGATGTCTTCACTTGCAATTTGGGCTTAG

Protein Analysis

388

Amino Acids

40.6

Weight (kDa)

5.77

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zip PF02535 23 - 243 4.9e-24 ZIP Zinc transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 305
AccI GTMKAC 1 cut(s) 1026
AccII CGCG 4 cut(s) 48, 254, 542, 575
AclWI GGATC 1 cut(s) 944
AcoI YGGCCR 3 cut(s) 583, 591, 882
AcuI CTGAAG 1 cut(s) 1008
AcvI CACGTG 1 cut(s) 589
AfaI GTAC 2 cut(s) 368, 781
AfiI CCNNNNNNNGG 8 cut(s) 134, 305, 414, 415, 568, 605, 867, 880
AflIII ACRYGT 1 cut(s) 573
AgsI TTSAA 3 cut(s) 827, 951, 1097
AhdI GACNNNNNGTC 1 cut(s) 55
AjiI CACGTC 1 cut(s) 694
AjnI CCWGG 2 cut(s) 387, 970
AjuI GAANNNNNNNTTGG 2 cut(s) 284, 316
AluBI AGCT 3 cut(s) 977, 1080, 1130
AluI AGCT 3 cut(s) 977, 1080, 1130
Alw21I GWGCWC 2 cut(s) 231, 979
Alw26I GTCTC 1 cut(s) 437
Alw44I GTGCAC 1 cut(s) 227
AlwI GGATC 1 cut(s) 944
AlwNI CAGNNNCTG 1 cut(s) 388
Ama87I CYCGRG 1 cut(s) 433
ApaLI GTGCAC 1 cut(s) 227
ApeKI GCWGC 5 cut(s) 168, 800, 846, 1052, 1080
Asp700I GAANNNNTTC 1 cut(s) 191
AspLEI GCGC 3 cut(s) 64, 256, 547
AspS9I GGNCC 7 cut(s) 288, 385, 391, 396, 406, 460, 789
AsuC2I CCSGG 4 cut(s) 202, 394, 458, 600
AsuHPI GGTGA 1 cut(s) 674
AvaI CYCGRG 1 cut(s) 433
AvaII GGWCC 1 cut(s) 288
BaeGI GKGCMC 4 cut(s) 231, 362, 624, 630
BanII GRGCYC 2 cut(s) 776, 979
BbrPI CACGTG 1 cut(s) 589
BbsI GAAGAC 1 cut(s) 1134
Bbv12I GWGCWC 2 cut(s) 231, 979
BbvI GCAGC 5 cut(s) 180, 812, 833, 1039, 1067
BccI CCATC 4 cut(s) 92, 316, 674, 822
BceAI ACGGC 2 cut(s) 181, 598
BcgI CGANNNNNNTGC 4 cut(s) 157, 191, 1031, 1065
BciT130I CCWGG 2 cut(s) 389, 972
BclI TGATCA 2 cut(s) 613, 741
BcnI CCSGG 4 cut(s) 202, 394, 458, 600
BcoDI GTCTC 1 cut(s) 437
BfaI CTAG 1 cut(s) 920
BfoI RGCGCY 1 cut(s) 65
BglI GCCNNNNNGGC 3 cut(s) 323, 542, 890
BmcAI AGTACT 1 cut(s) 368
Bme1390I CCNGG 6 cut(s) 202, 389, 394, 458, 600, 972
Bme18I GGWCC 1 cut(s) 288
BmeRI GACNNNNNGTC 1 cut(s) 55
BmeT110I CYCGRG 1 cut(s) 433
BmgBI CACGTC 1 cut(s) 694
BmgT120I GGNCC 7 cut(s) 288, 385, 391, 396, 406, 460, 789
BmiI GGNNCC 1 cut(s) 872
BmrFI CCNGG 6 cut(s) 202, 389, 394, 458, 600, 972
BmsI GCATC 2 cut(s) 335, 504
BoxI GACNNNNGTC 1 cut(s) 435
BpiI GAAGAC 1 cut(s) 1134
BpmI CTGGAG 1 cut(s) 461
Bpu10I CCTNAGC 1 cut(s) 567
BpuEI CTTGAG 1 cut(s) 56
BpuMI CCSGG 4 cut(s) 202, 394, 458, 600
BsaAI YACGTR 1 cut(s) 589
BsaJI CCNNGG 5 cut(s) 201, 284, 550, 634, 1035
BsaWI WCCGGW 1 cut(s) 144
BsaXI ACNNNNNCTCC 6 cut(s) 221, 251, 269, 299, 966, 996
Bsc4I CCNNNNNNNGG 8 cut(s) 134, 305, 414, 415, 568, 605, 867, 880
Bse118I RCCGGY 1 cut(s) 26
BseBI CCWGG 2 cut(s) 389, 972
BseDI CCNNGG 5 cut(s) 201, 284, 550, 634, 1035
BseGI GGATG 6 cut(s) 433, 486, 519, 682, 1080, 1140
BseLI CCNNNNNNNGG 8 cut(s) 134, 305, 414, 415, 568, 605, 867, 880
BseMII CTCAG 3 cut(s) 581, 719, 1055
BseSI GKGCMC 4 cut(s) 231, 362, 624, 630
BseXI GCAGC 5 cut(s) 180, 812, 833, 1039, 1067
BseYI CCCAGC 2 cut(s) 398, 1130
Bsh1236I CGCG 4 cut(s) 48, 254, 542, 575
BsiHKAI GWGCWC 2 cut(s) 231, 979
BsiHKCI CYCGRG 1 cut(s) 433
BslI CCNNNNNNNGG 8 cut(s) 134, 305, 414, 415, 568, 605, 867, 880
BsmAI GTCTC 1 cut(s) 437
BsmBI CGTCTC 1 cut(s) 437
BsmI GAATGC 2 cut(s) 534, 646
BsoBI CYCGRG 1 cut(s) 433
Bsp1286I GDGCHC 6 cut(s) 231, 362, 624, 630, 776, 979
Bsp143I GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
Bsp19I CCATGG 2 cut(s) 550, 634
BspCNI CTCAG 3 cut(s) 580, 718, 1056
BspFNI CGCG 4 cut(s) 48, 254, 542, 575
BspHI TCATGA 1 cut(s) 610
BspLI GGNNCC 1 cut(s) 872
BspPI GGATC 1 cut(s) 944
BsrFI RCCGGY 1 cut(s) 26
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 5 cut(s) 201, 284, 550, 634, 1035
BssMI GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
BssT1I CCWWGG 3 cut(s) 550, 634, 1035
Bst2UI CCWGG 2 cut(s) 389, 972
Bst4CI ACNGT 1 cut(s) 968
Bst6I CTCTTC 1 cut(s) 179
BstAPI GCANNNNNTGC 1 cut(s) 332
BstBAI YACGTR 1 cut(s) 589
BstC8I GCNNGC 6 cut(s) 19, 272, 362, 534, 630, 1115
BstDEI CTNAG 5 cut(s) 567, 705, 793, 1064, 1161
BstDSI CCRYGG 3 cut(s) 284, 550, 634
BstF5I GGATG 6 cut(s) 433, 486, 519, 682, 1080, 1140
BstFNI CGCG 4 cut(s) 48, 254, 542, 575
BstH2I RGCGCY 1 cut(s) 65
BstHHI GCGC 3 cut(s) 64, 256, 547
BstKTI GATC 6 cut(s) 135, 616, 744, 878, 939, 1045
BstMAI GTCTC 1 cut(s) 437
BstMBI GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
BstNI CCWGG 2 cut(s) 389, 972
BstNSI RCATGY 2 cut(s) 235, 536
BstPAI GACNNNNGTC 1 cut(s) 435
BstSCI CCNGG 6 cut(s) 200, 387, 392, 456, 598, 970
BstSLI GKGCMC 4 cut(s) 231, 362, 624, 630
BstUI CGCG 4 cut(s) 48, 254, 542, 575
BstV1I GCAGC 5 cut(s) 180, 812, 833, 1039, 1067
BstV2I GAAGAC 1 cut(s) 1134
BstXI CCANNNNNNTGG 1 cut(s) 641
BtgI CCRYGG 3 cut(s) 284, 550, 634
BtgZI GCGATG 1 cut(s) 70
BtrI CACGTC 1 cut(s) 694
BtsCI GGATG 6 cut(s) 433, 486, 519, 682, 1080, 1140
BtsIMutI CAGTG 1 cut(s) 984
Cac8I GCNNGC 6 cut(s) 19, 272, 362, 534, 630, 1115
CaiI CAGNNNCTG 1 cut(s) 388
CciI TCATGA 1 cut(s) 610
CfoI GCGC 3 cut(s) 64, 256, 547
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 7 cut(s) 288, 385, 391, 396, 406, 460, 789
CseI GACGC 2 cut(s) 260, 581
Csp6I GTAC 2 cut(s) 367, 780
CviQI GTAC 2 cut(s) 367, 780
DdeI CTNAG 5 cut(s) 567, 705, 793, 1064, 1161
DpnI GATC 6 cut(s) 134, 615, 743, 877, 938, 1044
DpnII GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
DriI GACNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 3 cut(s) 583, 591, 882
Eam1104I CTCTTC 1 cut(s) 179
Eam1105I GACNNNNNGTC 1 cut(s) 55
EarI CTCTTC 1 cut(s) 179
Ecl136II GAGCTC 1 cut(s) 977
Eco130I CCWWGG 3 cut(s) 550, 634, 1035
Eco147I AGGCCT 1 cut(s) 191
Eco24I GRGCYC 2 cut(s) 776, 979
Eco47I GGWCC 1 cut(s) 288
Eco53kI GAGCTC 1 cut(s) 977
Eco57I CTGAAG 1 cut(s) 1008
Eco72I CACGTG 1 cut(s) 589
Eco88I CYCGRG 1 cut(s) 433
EcoICRI GAGCTC 1 cut(s) 977
EcoO109I RGGNCCY 2 cut(s) 385, 789
EcoRII CCWGG 2 cut(s) 387, 970
EcoT14I CCWWGG 3 cut(s) 550, 634, 1035
EcoT22I ATGCAT 1 cut(s) 534
EcoT38I GRGCYC 2 cut(s) 776, 979
ErhI CCWWGG 3 cut(s) 550, 634, 1035
Esp3I CGTCTC 1 cut(s) 437
FbaI TGATCA 2 cut(s) 613, 741
FblI GTMKAC 1 cut(s) 1026
FokI GGATG 6 cut(s) 440, 493, 526, 689, 1087, 1147
FriOI GRGCYC 2 cut(s) 776, 979
FspBI CTAG 1 cut(s) 920
GlaI GCGC 3 cut(s) 63, 255, 546
GsaI CCCAGC 2 cut(s) 402, 1134
GsuI CTGGAG 1 cut(s) 461
HaeII RGCGCY 1 cut(s) 65
HgaI GACGC 2 cut(s) 260, 581
HhaI GCGC 3 cut(s) 64, 256, 547
Hin6I GCGC 3 cut(s) 62, 254, 545
HinP1I GCGC 3 cut(s) 62, 254, 545
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 8 cut(s) 32, 38, 53, 108, 117, 309, 431, 1001
HphI GGTGA 1 cut(s) 674
Hpy166II GTNNAC 3 cut(s) 229, 349, 1027
Hpy188III TCNNGA 6 cut(s) 136, 306, 440, 569, 611, 868
Hpy8I GTNNAC 3 cut(s) 229, 349, 1027
Hpy99I CGWCG 8 cut(s) 53, 61, 83, 116, 167, 182, 220, 698
HpyAV CCTTC 8 cut(s) 107, 181, 202, 464, 497, 820, 821, 983
HpyCH4III ACNGT 1 cut(s) 968
HpyCH4IV ACGT 2 cut(s) 588, 693
HpyCH4V TGCA 8 cut(s) 229, 517, 532, 800, 836, 849, 1083, 1151
HpyF3I CTNAG 5 cut(s) 567, 705, 793, 1064, 1161
HpySE526I ACGT 2 cut(s) 588, 693
HspAI GCGC 3 cut(s) 62, 254, 545
Ksp22I TGATCA 2 cut(s) 613, 741
Kzo9I GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
LmnI GCTCC 3 cut(s) 182, 974, 1127
Lsp1109I GCAGC 5 cut(s) 180, 812, 833, 1039, 1067
LweI GCATC 2 cut(s) 335, 504
MaeI CTAG 1 cut(s) 920
MaeII ACGT 2 cut(s) 588, 693
MaeIII GTNAC 3 cut(s) 578, 765, 982
MalI GATC 6 cut(s) 134, 615, 743, 877, 938, 1044
MboI GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
MboII GAAGA 6 cut(s) 151, 166, 304, 512, 939, 1134
MhlI GDGCHC 6 cut(s) 231, 362, 624, 630, 776, 979
MluCI AATT 4 cut(s) 863, 1084, 1098, 1152
MluI ACGCGT 1 cut(s) 573
MlyI GAGTC 4 cut(s) 41, 62, 117, 425
MmeI TCCRAC 5 cut(s) 15, 94, 160, 405, 505
MnlI CCTC 9 cut(s) 19, 141, 182, 397, 408, 490, 667, 836, 1065
Mph1103I ATGCAT 1 cut(s) 534
MroXI GAANNNNTTC 1 cut(s) 191
MseI TTAA 1 cut(s) 66
MslI CAYNNNNRTG 2 cut(s) 633, 639
MspR9I CCNGG 6 cut(s) 202, 389, 394, 458, 600, 972
Mva1269I GAATGC 2 cut(s) 534, 646
MvaI CCWGG 2 cut(s) 389, 972
MvnI CGCG 4 cut(s) 48, 254, 542, 575
NciI CCSGG 4 cut(s) 202, 394, 458, 600
NcoI CCATGG 2 cut(s) 550, 634
NdeII GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
NlaIV GGNNCC 1 cut(s) 872
NmuCI GTSAC 3 cut(s) 578, 765, 982
NsiI ATGCAT 1 cut(s) 534
NspI RCATGY 2 cut(s) 235, 536
PaeI GCATGC 1 cut(s) 536
PagI TCATGA 1 cut(s) 610
PceI AGGCCT 1 cut(s) 191
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 351
PctI GAATGC 2 cut(s) 534, 646
PdmI GAANNNNTTC 1 cut(s) 191
PfeI GAWTC 4 cut(s) 38, 117, 309, 1001
PflMI CCANNNNNTGG 1 cut(s) 305
PfoI TCCNGGA 1 cut(s) 970
PleI GAGTC 4 cut(s) 40, 61, 116, 425
PmaCI CACGTG 1 cut(s) 589
PmlI CACGTG 1 cut(s) 589
PpsI GAGTC 4 cut(s) 40, 61, 116, 425
Ppu21I YACGTR 1 cut(s) 589
PshAI GACNNNNGTC 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 979
Psp6I CCWGG 2 cut(s) 387, 970
PspCI CACGTG 1 cut(s) 589
PspFI CCCAGC 2 cut(s) 398, 1130
PspGI CCWGG 2 cut(s) 387, 970
PspN4I GGNNCC 1 cut(s) 872
PspPI GGNCC 7 cut(s) 288, 385, 391, 396, 406, 460, 789
PstNI CAGNNNCTG 1 cut(s) 388
RsaI GTAC 2 cut(s) 368, 781
RsaNI GTAC 2 cut(s) 367, 780
RseI CAYNNNNRTG 2 cut(s) 633, 639
SacI GAGCTC 1 cut(s) 979
SaqAI TTAA 1 cut(s) 66
Sau3AI GATC 6 cut(s) 132, 613, 741, 875, 936, 1042
Sau96I GGNCC 7 cut(s) 288, 385, 391, 396, 406, 460, 789
ScaI AGTACT 1 cut(s) 368
SchI GAGTC 4 cut(s) 41, 62, 117, 425
ScrFI CCNGG 6 cut(s) 202, 389, 394, 458, 600, 972
SduI GDGCHC 6 cut(s) 231, 362, 624, 630, 776, 979
SfaNI GCATC 2 cut(s) 335, 504
SinI GGWCC 1 cut(s) 288
SmiMI CAYNNNNRTG 2 cut(s) 633, 639
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
SphI GCATGC 1 cut(s) 536
Sse9I AATT 4 cut(s) 863, 1084, 1098, 1152
SseBI AGGCCT 1 cut(s) 191
SspMI CTAG 1 cut(s) 920
SstI GAGCTC 1 cut(s) 979
StuI AGGCCT 1 cut(s) 191
StyD4I CCNGG 6 cut(s) 200, 387, 392, 456, 598, 970
StyI CCWWGG 3 cut(s) 550, 634, 1035
TaaI ACNGT 1 cut(s) 968
TaiI ACGT 2 cut(s) 591, 696
TaqI TCGA 1 cut(s) 1041
TasI AATT 4 cut(s) 863, 1084, 1098, 1152
TatI WGTACW 1 cut(s) 366
TauI GCSGC 6 cut(s) 17, 48, 200, 545, 691, 884
TfiI GAWTC 4 cut(s) 38, 117, 309, 1001
Tru1I TTAA 1 cut(s) 66
Tru9I TTAA 1 cut(s) 66
TscAI CASTG 1 cut(s) 991
TseFI GTSAC 3 cut(s) 578, 765, 982
TseI GCWGC 5 cut(s) 168, 800, 846, 1052, 1080
Tsp45I GTSAC 3 cut(s) 578, 765, 982
TspGWI ACGGA 1 cut(s) 273
TspRI CASTG 1 cut(s) 991
Van91I CCANNNNNTGG 1 cut(s) 305
VneI GTGCAC 1 cut(s) 227
VpaK11BI GGWCC 1 cut(s) 288
XceI RCATGY 2 cut(s) 235, 536
XmiI GTMKAC 1 cut(s) 1026
XmnI GAANNNNTTC 1 cut(s) 191
XspI CTAG 1 cut(s) 920
ZrmI AGTACT 1 cut(s) 368
Zsp2I ATGCAT 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.