AT1G11050

receptor-like protein kinase At1g11050

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
3681679 .. 3684169
2491 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G11050.1

Sequence Viewer

Length: 1878 bp
ATGCCTAACTCGATTCTCTTTCTTCTTCTTTCATTCCTGTATCTCACAAACTGCGTTGCTCAATCTCCATCACAAACTTGTCCTTTAGATTTCTCTCATGTCCTAACAATCCCATGGAACACAACAGATTGTCAAAAGTCCGACAAATCAGCCGATAGCAAGAACAGTTGTTGCCAATCTCTTTTAACTCTAATCGGAATCCCTCTAGCTCATCGTCTCAAACAAACTTCCAATTTCCGTCTCCCAAATCTCGCTACTTCAATCTCTTGTCTCAACAATCTCCAAACGAAGCTTAGTTCACTCTCTCTATCTTCGAATCTCACCTCTCTCTGTTTCGATCCGAATCAGTTCGTCATCAATAACGAAACCTGTGCTGGAATCCAAACGACTCAAGATTGGGTATCTCGTCTCGGTCCATCTACGGCGCTTGACTCCGCCTGTAGCAGTGGTCTCACTGATCTAACGCGATGCGACGCTTGCGTGGCGGCTGGGTTTAGGGTTCAAAAACAGCTCATCACTTTGGACGGTAATAGCTCTCACGGTGTTTATTGTTACCATTTTGTGGTTACTTACGCTGCTGGTATTGTTAACAAGAAAGGACCTGAGAGTGATGATGCTTTGTCTTGTCTCTTCTCTTTGAGTTTGAGATCTCCATTGAACTCAAAGAAGAAAAGACACACGGTGGCTCTTGCTTTAGGGATAACCGGAGCTATTTTCGGGGCTCTGGTTATTGCCGGTTTGATTTGTTTGTATTTCCGGTTTGGTAAAGCTGTTAAAGGAGGAGAGGTTGGTTGGGAGGATCAAGGGTCTAGACCGAAATGGAGACCAAACACTGGCTCTATCTGGTTCAAAATCGAGGAACTAGAGAAAGCTACGAATAACTTCTCGCAGAAGAATTTCATCGGTCGAGGCGGGTTTGGTTTTGTTTACAAAGGGGTTTTACCAGATGGATCGGTTATCGCGGTTAAGAAGGTGATAGAGTCTGAGTTTCAAGGGGATGCAGAGTTTCGTAATGAGGTTGAGATCATTAGCAATTTGAAACATAGGAATCTTGTTCCGCTTAGAGGTTGTAGTATGGTGGATGATGATAGTGAGAGTCAGAGATATCTTGTTTATGATTACATGTCTAATGGAAATCTCGATGATCACTTGTTTCCTCGAGGTGAGACTACGAAGATGCCATTGAGCTGGCCTCAGAGAAAGAGCATCATTTTGGATGTGGCTAAAGGGTTGGCTTATTTGCATTACGGTGTGAAACCCGCTATTTATCACCGGGATATTAAAGGTACGAACATATTGTTAGATGTCGATATGAGAGCGAGAGTTGCGGATTTCGGTTTAGCTAAACAGAGTAGAGAAGGAGAGTCTCATCTCACTACCAGAGTTGCGGGAACACACGGTTACTTGGCTCCAGAGTATGCCCTCTATGGTCAATTAACCGAGAAAAGCGATGTGTATAGCTTCGGGGTTGTTATATTGGAGATCATGTGTGGAAGGAAAGCTCTTGATCTGTCTACTTCTGGATCACCAAACACTTTTCTGATCACAGATTGGGCTTGGTCATTGGTAAAAGCAGGGAAAACAGAGGAAGCTCTTGAGCAGTCTTTGTTGAGAGAGGAAGGCTCAGGGCTCTCGAATCCGAAAGGGATAATGGAGAGATTCTTGCAAGTTGGGATATTGTGTGCCCATGTATTGGTTGCTTTAAGGCCAACAATATTAGATGCATTGAAAATGCTTGAAGGAGACATCGAGGTTCCTCCTATTCCGGACCGACCAGTCCCGCTCGCGCATCCTTCGTACCGTATGGACGGAAACGGATTCACAATATCGCCTGCGCTTAGCGGACTACAAATACATTCCGGAGATATGCTCAGATGA

Protein Analysis

625

Amino Acids

68.52

Weight (kDa)

7.5

Isoelectric Point (pI)

40.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 23 - 184 9.7e-41 SPARK
Pkinase PF00069 296 - 504 8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 298 - 572 2.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1775
AbsI CCTCGAGG 1 cut(s) 1158
AccB7I CCANNNNNTGG 3 cut(s) 562, 833, 1693
AccBSI CCGCTC 1 cut(s) 1783
AccI GTMKAC 1 cut(s) 1514
AccII CGCG 3 cut(s) 466, 962, 1787
AccIII TCCGGA 2 cut(s) 1765, 1859
AclWI GGATC 4 cut(s) 332, 807, 958, 1531
AcsI RAATTY 1 cut(s) 895
AdeI CACNNNGTG 1 cut(s) 682
AfaI GTAC 2 cut(s) 1288, 1799
AfiI CCNNNNNNNGG 4 cut(s) 562, 833, 1064, 1693
AflIII ACRYGT 1 cut(s) 1122
AgsI TTSAA 8 cut(s) 261, 503, 658, 850, 992, 1039, 1729, 1739
AlwI GGATC 4 cut(s) 332, 807, 958, 1531
Ama87I CYCGRG 1 cut(s) 1158
Aor13HI TCCGGA 2 cut(s) 1765, 1859
AoxI GGCC 2 cut(s) 1190, 1706
ApeKI GCWGC 1 cut(s) 575
ApoI RAATTY 1 cut(s) 895
Asp700I GAANNNNTTC 3 cut(s) 347, 881, 896
AspLEI GCGC 3 cut(s) 427, 1789, 1837
AspS9I GGNCC 3 cut(s) 413, 599, 1768
AsuC2I CCSGG 1 cut(s) 1274
AsuHPI GGTGA 5 cut(s) 313, 985, 1175, 1262, 1518
AsuII TTCGAA 1 cut(s) 314
AvaI CYCGRG 1 cut(s) 1158
AvaII GGWCC 3 cut(s) 413, 599, 1768
BaeGI GKGCMC 1 cut(s) 1687
BanII GRGCYC 2 cut(s) 724, 1632
BbvI GCAGC 1 cut(s) 562
BccI CCATC 3 cut(s) 76, 424, 941
BceAI ACGGC 1 cut(s) 438
BcgI CGANNNNNNTGC 2 cut(s) 353, 387
BclI TGATCA 2 cut(s) 1144, 1542
BcnI CCSGG 1 cut(s) 1274
BfaI CTAG 3 cut(s) 206, 810, 863
BfmI CTRYAG 1 cut(s) 439
BfoI RGCGCY 1 cut(s) 428
BglII AGATCT 1 cut(s) 647
BisI GCNGC 2 cut(s) 486, 576
BlpI GCTNAGC 1 cut(s) 1838
BlsI GCNGC 2 cut(s) 487, 577
Bme1390I CCNGG 1 cut(s) 1274
Bme18I GGWCC 3 cut(s) 413, 599, 1768
BmeT110I CYCGRG 1 cut(s) 1158
BmgT120I GGNCC 3 cut(s) 413, 599, 1768
BmiI GGNNCC 2 cut(s) 1410, 1755
BmrFI CCNGG 1 cut(s) 1274
BmsI GCATC 7 cut(s) 458, 604, 988, 1167, 1215, 1711, 1798
BplI GAGNNNNNCTC 5 cut(s) 1177, 1209, 1607, 1639, 1854
BpmI CTGGAG 1 cut(s) 1395
Bpu10I CCTNAGC 1 cut(s) 1624
Bpu1102I GCTNAGC 1 cut(s) 1838
Bpu14I TTCGAA 1 cut(s) 314
BpuEI CTTGAG 2 cut(s) 375, 1616
BpuMI CCSGG 1 cut(s) 1274
BsaBI GATNNNNATC 1 cut(s) 342
BsaI GGTCTC 2 cut(s) 455, 817
BsaJI CCNNGG 1 cut(s) 113
BsaWI WCCGGW 4 cut(s) 704, 756, 1765, 1859
BsaXI ACNNNNNCTCC 4 cut(s) 771, 801, 1472, 1502
Bsc4I CCNNNNNNNGG 4 cut(s) 562, 833, 1064, 1693
Bse118I RCCGGY 1 cut(s) 734
Bse1I ACTGG 2 cut(s) 838, 1775
Bse8I GATNNNNATC 1 cut(s) 342
BseAI TCCGGA 2 cut(s) 1765, 1859
BseDI CCNNGG 1 cut(s) 113
BseGI GGATG 4 cut(s) 1003, 1087, 1222, 1789
BseJI GATNNNNATC 1 cut(s) 342
BseLI CCNNNNNNNGG 4 cut(s) 562, 833, 1064, 1693
BseMII CTCAG 4 cut(s) 594, 975, 1208, 1638
BseNI ACTGG 2 cut(s) 838, 1775
BseRI GAGGAG 1 cut(s) 795
BseSI GKGCMC 1 cut(s) 1687
BseXI GCAGC 1 cut(s) 562
BseYI CCCAGC 1 cut(s) 488
Bsh1236I CGCG 3 cut(s) 466, 962, 1787
Bsh1285I CGRYCG 1 cut(s) 907
BshFI GGCC 2 cut(s) 1192, 1708
BsiEI CGRYCG 1 cut(s) 907
BsiHKCI CYCGRG 1 cut(s) 1158
BsiSI CCGG 6 cut(s) 705, 735, 757, 1273, 1766, 1860
BslFI GGGAC 1 cut(s) 1763
BslI CCNNNNNNNGG 4 cut(s) 562, 833, 1064, 1693
BsmBI CGTCTC 3 cut(s) 221, 245, 413
BsmFI GGGAC 1 cut(s) 1763
BsnI GGCC 2 cut(s) 1192, 1708
Bso31I GGTCTC 2 cut(s) 455, 817
BsoBI CYCGRG 1 cut(s) 1158
Bsp119I TTCGAA 1 cut(s) 314
Bsp1286I GDGCHC 3 cut(s) 724, 1632, 1687
Bsp13I TCCGGA 2 cut(s) 1765, 1859
Bsp1720I GCTNAGC 1 cut(s) 1838
Bsp19I CCATGG 1 cut(s) 113
BspANI GGCC 2 cut(s) 1192, 1708
BspCNI CTCAG 4 cut(s) 595, 976, 1207, 1637
BspEI TCCGGA 2 cut(s) 1765, 1859
BspFNI CGCG 3 cut(s) 466, 962, 1787
BspLI GGNNCC 2 cut(s) 1410, 1755
BspPI GGATC 4 cut(s) 332, 807, 958, 1531
BspT104I TTCGAA 1 cut(s) 314
BspTNI GGTCTC 2 cut(s) 455, 817
BsrBI CCGCTC 1 cut(s) 1783
BsrFI RCCGGY 1 cut(s) 734
BsrI ACTGG 2 cut(s) 838, 1775
BssAI RCCGGY 1 cut(s) 734
BssECI CCNNGG 1 cut(s) 113
BssT1I CCWWGG 1 cut(s) 113
Bst4CI ACNGT 7 cut(s) 167, 527, 542, 682, 1250, 1400, 1802
Bst6I CTCTTC 1 cut(s) 635
BstBI TTCGAA 1 cut(s) 314
BstC8I GCNNGC 4 cut(s) 478, 1190, 1785, 1833
BstDEI CTNAG 8 cut(s) 293, 603, 984, 1061, 1194, 1624, 1838, 1871
BstDSI CCRYGG 1 cut(s) 113
BstF5I GGATG 4 cut(s) 1003, 1087, 1222, 1789
BstFNI CGCG 3 cut(s) 466, 962, 1787
BstH2I RGCGCY 1 cut(s) 428
BstHHI GCGC 3 cut(s) 427, 1789, 1837
BstMCI CGRYCG 1 cut(s) 907
BstMWI GCNNNNNNNGC 3 cut(s) 477, 482, 1325
BstNSI RCATGY 1 cut(s) 1126
BstSCI CCNGG 1 cut(s) 1272
BstSFI CTRYAG 1 cut(s) 439
BstSLI GKGCMC 1 cut(s) 1687
BstUI CGCG 3 cut(s) 466, 962, 1787
BstV1I GCAGC 1 cut(s) 562
BstX2I RGATCY 1 cut(s) 647
BstXI CCANNNNNNTGG 1 cut(s) 1188
BstYI RGATCY 1 cut(s) 647
BsuRI GGCC 2 cut(s) 1192, 1708
BtgI CCRYGG 1 cut(s) 113
BtgZI GCGATG 2 cut(s) 481, 1464
BtsCI GGATG 4 cut(s) 1003, 1087, 1222, 1789
BtsI GCAGTG 1 cut(s) 451
BtsIMutI CAGTG 3 cut(s) 451, 453, 831
Cac8I GCNNGC 4 cut(s) 478, 1190, 1785, 1833
CfoI GCGC 3 cut(s) 427, 1789, 1837
Cfr10I RCCGGY 1 cut(s) 734
Cfr13I GGNCC 3 cut(s) 413, 599, 1768
CpoI CGGWCCG 1 cut(s) 1768
CseI GACGC 1 cut(s) 482
Csp6I GTAC 2 cut(s) 1287, 1798
CspI CGGWCCG 1 cut(s) 1768
CviAII CATG 5 cut(s) 98, 114, 1123, 1486, 1688
CviQI GTAC 2 cut(s) 1287, 1798
DdeI CTNAG 8 cut(s) 293, 603, 984, 1061, 1194, 1624, 1838, 1871
DraIII CACNNNGTG 1 cut(s) 682
DrdI GACNNNNNNGTC 1 cut(s) 1775
DseDI GACNNNNNNGTC 1 cut(s) 1775
Eam1104I CTCTTC 1 cut(s) 635
EarI CTCTTC 1 cut(s) 635
EciI GGCGGA 1 cut(s) 424
Eco130I CCWWGG 1 cut(s) 113
Eco24I GRGCYC 2 cut(s) 724, 1632
Eco31I GGTCTC 2 cut(s) 455, 817
Eco32I GATATC 1 cut(s) 1106
Eco47I GGWCC 3 cut(s) 413, 599, 1768
Eco88I CYCGRG 1 cut(s) 1158
EcoO109I RGGNCCY 1 cut(s) 599
EcoRV GATATC 1 cut(s) 1106
EcoT14I CCWWGG 1 cut(s) 113
EcoT22I ATGCAT 1 cut(s) 1726
EcoT38I GRGCYC 2 cut(s) 724, 1632
ErhI CCWWGG 1 cut(s) 113
Esp3I CGTCTC 3 cut(s) 221, 245, 413
FaeI CATG 5 cut(s) 101, 117, 1126, 1489, 1691
FaqI GGGAC 1 cut(s) 1763
FatI CATG 5 cut(s) 97, 113, 1122, 1485, 1687
FauI CCCGC 4 cut(s) 905, 1267, 1381, 1788
FbaI TGATCA 2 cut(s) 1144, 1542
FblI GTMKAC 1 cut(s) 1514
Fnu4HI GCNGC 2 cut(s) 486, 576
FokI GGATG 4 cut(s) 1010, 1094, 1229, 1776
FriOI GRGCYC 2 cut(s) 724, 1632
Fsp4HI GCNGC 2 cut(s) 486, 576
FspBI CTAG 3 cut(s) 206, 810, 863
GlaI GCGC 3 cut(s) 426, 1788, 1836
GluI GCNGC 2 cut(s) 486, 576
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 1 cut(s) 1395
HaeII RGCGCY 1 cut(s) 428
HaeIII GGCC 2 cut(s) 1192, 1708
HapII CCGG 6 cut(s) 705, 735, 757, 1273, 1766, 1860
HgaI GACGC 1 cut(s) 482
HhaI GCGC 3 cut(s) 427, 1789, 1837
Hin1II CATG 5 cut(s) 101, 117, 1126, 1489, 1691
Hin6I GCGC 3 cut(s) 425, 1787, 1835
HinP1I GCGC 3 cut(s) 425, 1787, 1835
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HindIII AAGCTT 1 cut(s) 290
HpaI GTTAAC 1 cut(s) 589
HpaII CCGG 6 cut(s) 705, 735, 757, 1273, 1766, 1860
HphI GGTGA 5 cut(s) 313, 985, 1175, 1262, 1518
Hpy166II GTNNAC 4 cut(s) 299, 589, 928, 1515
Hpy188I TCNGA 9 cut(s) 142, 197, 342, 985, 1101, 1197, 1542, 1641, 1874
Hpy8I GTNNAC 4 cut(s) 299, 589, 928, 1515
Hpy99I CGWCG 1 cut(s) 476
HpyAV CCTTC 6 cut(s) 964, 1352, 1488, 1613, 1733, 1803
HpyCH4III ACNGT 7 cut(s) 167, 527, 542, 682, 1250, 1400, 1802
HpyCH4V TGCA 4 cut(s) 1001, 1243, 1666, 1724
HpyF10VI GCNNNNNNNGC 3 cut(s) 477, 482, 1325
HpyF3I CTNAG 8 cut(s) 293, 603, 984, 1061, 1194, 1624, 1838, 1871
Hsp92II CATG 5 cut(s) 101, 117, 1126, 1489, 1691
HspAI GCGC 3 cut(s) 425, 1787, 1835
Kpn2I TCCGGA 2 cut(s) 1765, 1859
Ksp22I TGATCA 2 cut(s) 1144, 1542
KspAI GTTAAC 1 cut(s) 589
LmnI GCTCC 2 cut(s) 707, 1414
Lsp1109I GCAGC 1 cut(s) 562
LweI GCATC 7 cut(s) 458, 604, 988, 1167, 1215, 1711, 1798
MaeI CTAG 3 cut(s) 206, 810, 863
MaeIII GTNAC 3 cut(s) 551, 565, 1400
MbiI CCGCTC 1 cut(s) 1783
MboII GAAGA 7 cut(s) 14, 17, 303, 622, 679, 904, 1186
MflI RGATCY 1 cut(s) 647
MhlI GDGCHC 3 cut(s) 724, 1632, 1687
MluCI AATT 4 cut(s) 232, 895, 1033, 1433
MlyI GAGTC 5 cut(s) 382, 425, 989, 1105, 1373
MmeI TCCRAC 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 1726
MroI TCCGGA 2 cut(s) 1765, 1859
MroXI GAANNNNTTC 3 cut(s) 347, 881, 896
MseI TTAA 7 cut(s) 185, 588, 774, 966, 1281, 1436, 1703
MslI CAYNNNNRTG 1 cut(s) 1248
MspI CCGG 6 cut(s) 705, 735, 757, 1273, 1766, 1860
MspR9I CCNGG 1 cut(s) 1274
MvnI CGCG 3 cut(s) 466, 962, 1787
MwoI GCNNNNNNNGC 3 cut(s) 477, 482, 1325
NciI CCSGG 1 cut(s) 1274
NcoI CCATGG 1 cut(s) 113
NlaIII CATG 5 cut(s) 101, 117, 1126, 1489, 1691
NlaIV GGNNCC 2 cut(s) 1410, 1755
NsiI ATGCAT 1 cut(s) 1726
NspI RCATGY 1 cut(s) 1126
NspV TTCGAA 1 cut(s) 314
PaeR7I CTCGAG 1 cut(s) 1158
PciI ACATGT 1 cut(s) 1122
PdmI GAANNNNTTC 3 cut(s) 347, 881, 896
PfeI GAWTC 9 cut(s) 13, 198, 316, 343, 378, 1048, 1636, 1659, 1818
PflMI CCANNNNNTGG 3 cut(s) 562, 833, 1693
PkrI GCNGC 2 cut(s) 487, 577
PleI GAGTC 5 cut(s) 382, 425, 988, 1104, 1372
PpsI GAGTC 5 cut(s) 382, 425, 988, 1104, 1372
PpuMI RGGWCCY 1 cut(s) 599
PscI ACATGT 1 cut(s) 1122
Psp5II RGGWCCY 1 cut(s) 599
PspFI CCCAGC 1 cut(s) 488
PspN4I GGNNCC 2 cut(s) 1410, 1755
PspPI GGNCC 3 cut(s) 413, 599, 1768
PspPPI RGGWCCY 1 cut(s) 599
PspXI VCTCGAGB 1 cut(s) 1158
PsuI RGATCY 1 cut(s) 647
RsaI GTAC 2 cut(s) 1288, 1799
RsaNI GTAC 2 cut(s) 1287, 1798
RseI CAYNNNNRTG 1 cut(s) 1248
Rsr2I CGGWCCG 1 cut(s) 1768
RsrII CGGWCCG 1 cut(s) 1768
SaqAI TTAA 7 cut(s) 185, 588, 774, 966, 1281, 1436, 1703
SatI GCNGC 2 cut(s) 486, 576
Sau96I GGNCC 3 cut(s) 413, 599, 1768
SchI GAGTC 5 cut(s) 382, 425, 989, 1105, 1373
ScrFI CCNGG 1 cut(s) 1274
SduI GDGCHC 3 cut(s) 724, 1632, 1687
SfaNI GCATC 7 cut(s) 458, 604, 988, 1167, 1215, 1711, 1798
SfcI CTRYAG 1 cut(s) 439
Sfr274I CTCGAG 1 cut(s) 1158
SfuI TTCGAA 1 cut(s) 314
SinI GGWCC 3 cut(s) 413, 599, 1768
SlaI CTCGAG 1 cut(s) 1158
SmiMI CAYNNNNRTG 1 cut(s) 1248
SmlI CTYRAG 3 cut(s) 390, 1158, 1595
SmoI CTYRAG 3 cut(s) 390, 1158, 1595
Sse9I AATT 4 cut(s) 232, 895, 1033, 1433
SspI AATATT 1 cut(s) 1716
SspMI CTAG 3 cut(s) 206, 810, 863
StyD4I CCNGG 1 cut(s) 1272
StyI CCWWGG 1 cut(s) 113
TaaI ACNGT 7 cut(s) 167, 527, 542, 682, 1250, 1400, 1802
TaqII GACCGA 4 cut(s) 401, 829, 893, 1785
TasI AATT 4 cut(s) 232, 895, 1033, 1433
TauI GCSGC 1 cut(s) 488
TfiI GAWTC 9 cut(s) 13, 198, 316, 343, 378, 1048, 1636, 1659, 1818
Tru1I TTAA 7 cut(s) 185, 588, 774, 966, 1281, 1436, 1703
Tru9I TTAA 7 cut(s) 185, 588, 774, 966, 1281, 1436, 1703
TscAI CASTG 3 cut(s) 451, 460, 838
TseI GCWGC 1 cut(s) 575
TspDTI ATGAA 2 cut(s) 21, 889
TspGWI ACGGA 3 cut(s) 227, 1824, 1830
TspRI CASTG 3 cut(s) 451, 460, 838
Van91I CCANNNNNTGG 3 cut(s) 562, 833, 1693
VpaK11BI GGWCC 3 cut(s) 413, 599, 1768
XapI RAATTY 1 cut(s) 895
XbaI TCTAGA 1 cut(s) 809
XceI RCATGY 1 cut(s) 1126
XhoI CTCGAG 1 cut(s) 1158
XmiI GTMKAC 1 cut(s) 1514
XmnI GAANNNNTTC 3 cut(s) 347, 881, 896
XspI CTAG 3 cut(s) 206, 810, 863
Zsp2I ATGCAT 1 cut(s) 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.