Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00111

Orthogroup ID

OG0009218

Physical Location & Seq

Genomic Coordinates Forward (+)

11767 .. 14406

Gene Structure 2640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G003240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGATGAAGCTAGGTGGGTTTCTGTTGTTTGTGTCTCTCTCCCTACAACTCCCTCTCATCTCTACCCAATCCACAAACTCAACCAACACAACCACATCATGCCCCATGGATCTGAGCTACGTGCTTAGAATCCCCTTCAACGCCTCCACATGCCGAAACTTCCAAGGCCCTCCCAAAACCCCACAAATGGACACCACCCAGATCCCATGCTGCCAAACCCTCTTGTCTCTCTATGGAATAGCCTTTGCCCAACACCTCAAAGAAACCACTCTGTTTCAACTCCCCGACCTATCCACCTCAAACTCCTGCCTCCAAAATTTCCAGTCCAAGCTCACCTCCCTCTCCCTCCCTTCCACTTTGGTCTCCTACTGCTTTGACCCTGCACAGTTTGTCATCGCCCCCAACATCTGTGCCCATATTGAGTCTTCCCAAGACTGGGTCTCTAAGCTCAATGGCACCACTGTACTGGATTCTTCCTGCAGACCAGACCTCACTGATCTCTCCTCCTGCGACGCTTGCGTCGCCGCCGGCCTCAAGGTTCAGCAACAGTTGATCGCCGTAGATGGTAACACTTCTCACTCTAGAGATTGTTGGTACTTTACAATTCTTTATGCTGCTGGTATCATCAATGAGTTTGGACCTGAGAGCAATGGTGCTGCCTCTTGTATTTTTGGTTTGTCAATGGATTCTAATGTGGGCTCGCCCAAAAAGAGCAACACAGGTCTTGTTTTCGGCCTCACCGGTGCTGGGGTTGCCGTGTTTGTTATGTCCAGTTTGTTGGGGTTGTATTTTTGGTATGACAGGAGGTGGAGGAACAAAAGGGTTGTTGGGTCGAGAATGGATTCTGGTTTTGATTTGGATGAAAGAGAGGCTAGGATTAGAGTTAGACCCAACACGGGTTCCATTTGGTTTAAAATTCAGGACCTTGAGAAGGCTACTAATAACTTTTCGCAGAAGAATTTCATAGGCCGAGGTGGATTTGGTCTTGTTTACAAGGGTGTTCTATCTGATGGAACTACTGTTGCTGTTAAGAAAGTTATAGAGTCTGATTTTCAAGGGGATGCTGAATTCTGCAATGAGGTTGAGATTATTAGCAATTTGAAGCATCGGAATCTGGTTCCGCTTAGAGGGTGTTGTGTGGTTGAGGGGGAGGACAATTATGAAGAGATGGGAAGTAATAGGTACCTTGTATATGATTACATGCCGAATGGAAATCTAGATGACCATCTGTCTCTTTCTCTGTCTAGTAGTCAGCGTGGAATTGAAAGGAGGCCCCTGACTTGGCCTCAAAGGAAGGGCATAATCTTGGATGTGGCCAAGGGACTAGCTTATTTGCATTATGGAGTGAAGCCTGCAATATATCACAGAGATATTAAGGCAACAAACATACTACTAGATGTAGATATGAGAGCAAGAGTGGCAGATTTTGGGCTTGCAAAGCAAAGTATGGAAGGCCAGTCTCATCTGACAACTAGAGTGGCAGGGACTCACGGGTACTTGGCCCCTGAATATGCTCTTTACGGACAGCTGACCGAGAAGAGCGATGTTTATAGCTTTGGAGTTGTTGTTTTGGAGATCATGTGTGGGAGAAAAGCTCTTGATCTATCTTCCTTGGGATCCCCGCGAGCATTCTTGATCACGGATTGGGCTTGGTCATTAGTAAAATCTGGGAAAGTTGAAGAGGCCTTAGACAAATCACTGTTGAAAGAGGGGGACAGTGTCAATTCAAATCCAAAGAGCATAATGGAAAGATTTTTGCTTGTTGGGATTTTGTGTGCTCATGTGATGGTTGCTTTACGGCCTAGCATTTTGGATGCACTGAAAATGTTGGAAGGGGATATTGAGGTTCCACCGATTCCAGATAGGCCAATGCCTCTTGGTCACCCTTCATGTTATGGCGACGGCAATACTTTCAGCATATCACCAGCTTTGAGCGGGCCAAGATTACATAGTGGAGACATGCTCAGGTTTATCGGAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

660

Amino Acids

72.51

Weight (kDa)

6.21

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	29 - 197	4.1e-41	SPARK
Pkinase	PF00069	317 - 534	1.5e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	319 - 530	6.3e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11050
fragaria_vesca	FvH4_5g29100 FvH4_5g29100 FvH4_5g29100
malus_domestica	MD08G1235700.v1.1 MD15G1427400.v1.1
prunus_persica	Prupe.1G571200_v2.0.a1 Prupe.1G571200_v2.0.a1
pyrus_communis	pycom08g20370 pycom15g37890
rosa_chinensis	RchiOBHm_Chr7g0221741
rosa_laevigata	RLG00000002134
rosa_multiflora	Rmu_co8451303.1_g000001 Rmu_sc0003311.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238080
rosa_rugosa	Rorug07G0203100
rosa_samantha	Rh7AG344000 Rh7BG334500 Rh7CG361400 Rh7DG341800
rosa_wichuraiana	Rw0G003240 Rw7G029170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	518
Acc65I	GGTACC	1 cut(s)	1182
AccB1I	GGYRCC	2 cut(s)	455, 1182
AccBSI	CCGCTC	1 cut(s)	1935
AccII	CGCG	1 cut(s)	1624
AciI	CCGC	4 cut(s)	525, 1121, 1622, 1935
AclWI	GGATC	4 cut(s)	117, 196, 1611, 1624
AcoI	YGGCCR	1 cut(s)	1314
AcsI	RAATTY	4 cut(s)	316, 915, 958, 1067
AfaI	GTAC	4 cut(s)	465, 596, 1184, 1496
AfiI	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
AgeI	ACCGGT	1 cut(s)	740
AgsI	TTSAA	8 cut(s)	139, 278, 1055, 1102, 1265, 1679, 1705, 1728
AhdI	GACNNNNNGTC	1 cut(s)	1228
AluBI	AGCT	9 cut(s)	10, 117, 331, 448, 1328, 1528, 1554, 1595, 1928
AluI	AGCT	9 cut(s)	10, 117, 331, 448, 1328, 1528, 1554, 1595, 1928
Alw21I	GWGCWC	1 cut(s)	1780
Alw26I	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
AlwI	GGATC	4 cut(s)	117, 196, 1611, 1624
ApeKI	GCWGC	3 cut(s)	210, 614, 656
ApoI	RAATTY	4 cut(s)	316, 915, 958, 1067
AsiGI	ACCGGT	1 cut(s)	740
Asp700I	GAANNNNTTC	2 cut(s)	841, 959
Asp718I	GGTACC	1 cut(s)	1182
AspS9I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
AsuHPI	GGTGA	4 cut(s)	325, 730, 1874, 1914
AvaII	GGWCC	2 cut(s)	638, 922
BaeGI	GKGCMC	1 cut(s)	415
BalI	TGGCCA	1 cut(s)	1316
BamHI	GGATCC	1 cut(s)	1616
BanI	GGYRCC	2 cut(s)	455, 1182
BanII	GRGCYC	1 cut(s)	701
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	1 cut(s)	1780
BbvI	GCAGC	3 cut(s)	197, 601, 643
BccI	CCATC	5 cut(s)	557, 1004, 1162, 1233, 1780
BceAI	ACGGC	4 cut(s)	542, 740, 1814, 1918
BclI	TGATCA	1 cut(s)	1635
BcoDI	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
BfaI	CTAG	9 cut(s)	11, 582, 873, 1217, 1245, 1325, 1394, 1473, 1803
BfmI	CTRYAG	1 cut(s)	478
BisI	GCNGC	4 cut(s)	211, 525, 615, 657
BlsI	GCNGC	4 cut(s)	212, 526, 616, 658
Bme18I	GGWCC	2 cut(s)	638, 922
BmeRI	GACNNNNNGTC	1 cut(s)	1228
BmgT120I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
BmiI	GGNNCC	8 cut(s)	457, 901, 1119, 1184, 1274, 1503, 1618, 1848
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	3 cut(s)	1051, 1114, 1804
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	1 cut(s)	417
BplI	GAGNNNNNCTC	4 cut(s)	1579, 1611, 1947, 1979
Bpu10I	CCTNAGC	1 cut(s)	1964
BpuEI	CTTGAG	2 cut(s)	518, 947
BsaAI	YACGTR	1 cut(s)	121
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaI	GGTCTC	2 cut(s)	367, 445
BsaJI	CCNNGG	5 cut(s)	105, 163, 970, 1317, 1611
BsaWI	WCCGGW	1 cut(s)	740
BsaXI	ACNNNNNCTCC	4 cut(s)	1551, 1565, 1581, 1595
Bsc4I	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
Bse118I	RCCGGY	2 cut(s)	527, 740
Bse1I	ACTGG	5 cut(s)	322, 440, 471, 771, 1456
Bse3DI	GCAATG	2 cut(s)	655, 1081
Bse8I	GATNNNNATC	1 cut(s)	1224
BseDI	CCNNGG	5 cut(s)	105, 163, 970, 1317, 1611
BseGI	GGATG	4 cut(s)	865, 1066, 1315, 1819
BseJI	GATNNNNATC	1 cut(s)	1224
BseLI	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
BseMI	GCAATG	2 cut(s)	655, 1081
BseMII	CTCAG	3 cut(s)	104, 633, 1978
BseNI	ACTGG	5 cut(s)	322, 440, 471, 771, 1456
BseRI	GAGGAG	1 cut(s)	493
BseSI	GKGCMC	1 cut(s)	415
BseXI	GCAGC	3 cut(s)	197, 601, 643
BseYI	CCCAGC	1 cut(s)	746
BsgI	GTGCAG	1 cut(s)	366
Bsh1236I	CGCG	1 cut(s)	1624
BshNI	GGYRCC	2 cut(s)	455, 1182
BshTI	ACCGGT	1 cut(s)	740
BsiHKAI	GWGCWC	1 cut(s)	1780
BsiSI	CCGG	2 cut(s)	528, 741
BslFI	GGGAC	3 cut(s)	1335, 1498, 1727
BslI	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
BsmAI	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
BsmFI	GGGAC	3 cut(s)	1335, 1498, 1727
BsmI	GAATGC	1 cut(s)	1628
Bso31I	GGTCTC	2 cut(s)	367, 445
Bsp1286I	GDGCHC	3 cut(s)	415, 701, 1780
Bsp143I	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
Bsp19I	CCATGG	1 cut(s)	105
BspACI	CCGC	4 cut(s)	525, 1121, 1622, 1935
BspCNI	CTCAG	3 cut(s)	105, 634, 1977
BspFNI	CGCG	1 cut(s)	1624
BspLI	GGNNCC	8 cut(s)	457, 901, 1119, 1184, 1274, 1503, 1618, 1848
BspMAI	CTGCAG	1 cut(s)	482
BspPI	GGATC	4 cut(s)	117, 196, 1611, 1624
BspQI	GCTCTTC	1 cut(s)	1532
BspT107I	GGYRCC	2 cut(s)	455, 1182
BspTNI	GGTCTC	2 cut(s)	367, 445
BsrBI	CCGCTC	1 cut(s)	1935
BsrDI	GCAATG	2 cut(s)	655, 1081
BsrFI	RCCGGY	2 cut(s)	527, 740
BsrI	ACTGG	5 cut(s)	322, 440, 471, 771, 1456
BssAI	RCCGGY	2 cut(s)	527, 740
BssECI	CCNNGG	5 cut(s)	105, 163, 970, 1317, 1611
BssMI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
BssT1I	CCWWGG	4 cut(s)	105, 163, 1317, 1611
Bst4CI	ACNGT	6 cut(s)	387, 463, 549, 1021, 1701, 1718
Bst6I	CTCTTC	3 cut(s)	1158, 1532, 1674
BstBAI	YACGTR	1 cut(s)	121
BstC8I	GCNNGC	7 cut(s)	517, 529, 701, 1353, 1434, 1626, 1937
BstDEI	CTNAG	7 cut(s)	113, 125, 444, 642, 1124, 1687, 1964
BstDSI	CCRYGG	1 cut(s)	105
BstEII	GGTNACC	1 cut(s)	1880
BstENI	CCTNNNNNAGG	1 cut(s)	929
BstF5I	GGATG	4 cut(s)	865, 1066, 1315, 1819
BstFNI	CGCG	1 cut(s)	1624
BstKTI	GATC	8 cut(s)	112, 204, 499, 555, 1578, 1603, 1619, 1638
BstMAI	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
BstMBI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
BstMWI	GCNNNNNNNGC	5 cut(s)	516, 521, 752, 1418, 1438
BstNSI	RCATGY	3 cut(s)	153, 1204, 1963
BstPI	GGTNACC	1 cut(s)	1880
BstSFI	CTRYAG	1 cut(s)	478
BstSLI	GKGCMC	1 cut(s)	415
BstUI	CGCG	1 cut(s)	1624
BstV1I	GCAGC	3 cut(s)	197, 601, 643
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	3 cut(s)	109, 201, 1616
BstXI	CCANNNNNNTGG	2 cut(s)	466, 778
BstYI	RGATCY	3 cut(s)	109, 201, 1616
BtgI	CCRYGG	1 cut(s)	105
BtgZI	GCGATG	2 cut(s)	379, 1557
BtsCI	GGATG	4 cut(s)	865, 1066, 1315, 1819
BtsIMutI	CAGTG	5 cut(s)	459, 492, 1697, 1723, 1817
Cac8I	GCNNGC	7 cut(s)	517, 529, 701, 1353, 1434, 1626, 1937
Cfr10I	RCCGGY	2 cut(s)	527, 740
Cfr13I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
CseI	GACGC	2 cut(s)	508, 521
Csp6I	GTAC	4 cut(s)	464, 595, 1183, 1495
CspAI	ACCGGT	1 cut(s)	740
CspCI	CAANNNNNGTGG	2 cut(s)	1458, 1493
CviAII	CATG	9 cut(s)	99, 106, 150, 207, 1201, 1579, 1781, 1890, 1960
CviQI	GTAC	4 cut(s)	464, 595, 1183, 1495
DdeI	CTNAG	7 cut(s)	113, 125, 444, 642, 1124, 1687, 1964
DpnI	GATC	8 cut(s)	111, 203, 498, 554, 1577, 1602, 1618, 1637
DpnII	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
DraI	TTTAAA	1 cut(s)	913
DrdI	GACNNNNNNGTC	1 cut(s)	518
DriI	GACNNNNNGTC	1 cut(s)	1228
DseDI	GACNNNNNNGTC	1 cut(s)	518
EaeI	YGGCCR	1 cut(s)	1314
Eam1104I	CTCTTC	3 cut(s)	1158, 1532, 1674
Eam1105I	GACNNNNNGTC	1 cut(s)	1228
EarI	CTCTTC	3 cut(s)	1158, 1532, 1674
Eco130I	CCWWGG	4 cut(s)	105, 163, 1317, 1611
Eco147I	AGGCCT	1 cut(s)	1685
Eco24I	GRGCYC	1 cut(s)	701
Eco31I	GGTCTC	2 cut(s)	367, 445
Eco47I	GGWCC	2 cut(s)	638, 922
Eco91I	GGTNACC	1 cut(s)	1880
EcoNI	CCTNNNNNAGG	1 cut(s)	929
EcoO109I	RGGNCCY	3 cut(s)	167, 922, 1272
EcoO65I	GGTNACC	1 cut(s)	1880
EcoRI	GAATTC	1 cut(s)	1067
EcoT14I	CCWWGG	4 cut(s)	105, 163, 1317, 1611
EcoT38I	GRGCYC	1 cut(s)	701
ErhI	CCWWGG	4 cut(s)	105, 163, 1317, 1611
FaeI	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
FaqI	GGGAC	3 cut(s)	1335, 1498, 1727
FatI	CATG	9 cut(s)	98, 105, 149, 206, 1200, 1578, 1780, 1889, 1959
FauI	CCCGC	2 cut(s)	1629, 1928
FbaI	TGATCA	1 cut(s)	1635
Fnu4HI	GCNGC	4 cut(s)	211, 525, 615, 657
FokI	GGATG	4 cut(s)	872, 1073, 1322, 1826
FriOI	GRGCYC	1 cut(s)	701
Fsp4HI	GCNGC	4 cut(s)	211, 525, 615, 657
FspBI	CTAG	9 cut(s)	11, 582, 873, 1217, 1245, 1325, 1394, 1473, 1803
GluI	GCNGC	4 cut(s)	211, 525, 615, 657
GsaI	CCCAGC	1 cut(s)	750
HapII	CCGG	2 cut(s)	528, 741
HgaI	GACGC	2 cut(s)	508, 521
Hin1II	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
HinfI	GANTC	9 cut(s)	129, 422, 470, 686, 842, 1043, 1111, 1486, 1855
HpaII	CCGG	2 cut(s)	528, 741
HphI	GGTGA	4 cut(s)	325, 730, 1874, 1914
Hpy166II	GTNNAC	1 cut(s)	991
Hpy188I	TCNGA	6 cut(s)	114, 1009, 1048, 1110, 1467, 1976
Hpy188III	TCNNGA	7 cut(s)	582, 834, 920, 1217, 1598, 1633, 1859
Hpy8I	GTNNAC	1 cut(s)	991
Hpy99I	CGWCG	3 cut(s)	515, 524, 1904
HpyAV	CCTTC	7 cut(s)	145, 360, 925, 1288, 1445, 1826, 1896
HpyCH4III	ACNGT	6 cut(s)	387, 463, 549, 1021, 1701, 1718
HpyCH4IV	ACGT	1 cut(s)	120
HpyCH4V	TGCA	7 cut(s)	383, 480, 1074, 1336, 1355, 1436, 1817
HpyF10VI	GCNNNNNNNGC	5 cut(s)	516, 521, 752, 1418, 1438
HpyF3I	CTNAG	7 cut(s)	113, 125, 444, 642, 1124, 1687, 1964
HpySE526I	ACGT	1 cut(s)	120
Hsp92II	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
KpnI	GGTACC	1 cut(s)	1186
KroI	GCCGGC	1 cut(s)	527
KroNI	GCCGGC	1 cut(s)	529
Ksp22I	TGATCA	1 cut(s)	1635
Kzo9I	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
LguI	GCTCTTC	1 cut(s)	1532
Lsp1109I	GCAGC	3 cut(s)	197, 601, 643
LweI	GCATC	3 cut(s)	1051, 1114, 1804
MaeI	CTAG	9 cut(s)	11, 582, 873, 1217, 1245, 1325, 1394, 1473, 1803
MaeII	ACGT	1 cut(s)	120
MaeIII	GTNAC	2 cut(s)	566, 1880
MalI	GATC	8 cut(s)	111, 203, 498, 554, 1577, 1602, 1618, 1637
MbiI	CCGCTC	1 cut(s)	1935
MboI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
MboII	GAAGA	7 cut(s)	417, 465, 967, 1175, 1549, 1599, 1691
MflI	RGATCY	3 cut(s)	109, 201, 1616
MhlI	GDGCHC	3 cut(s)	415, 701, 1780
MlsI	TGGCCA	1 cut(s)	1316
MluCI	AATT	9 cut(s)	316, 603, 915, 958, 1067, 1096, 1156, 1260, 1723
MluNI	TGGCCA	1 cut(s)	1316
MlyI	GAGTC	3 cut(s)	431, 1052, 1480
MmeI	TCCRAC	1 cut(s)	1809
Mox20I	TGGCCA	1 cut(s)	1316
MroNI	GCCGGC	1 cut(s)	527
MroXI	GAANNNNTTC	2 cut(s)	841, 959
MscI	TGGCCA	1 cut(s)	1316
MseI	TTAA	3 cut(s)	912, 1029, 1374
Msp20I	TGGCCA	1 cut(s)	1316
MspA1I	CMGCKG	1 cut(s)	1528
MspI	CCGG	2 cut(s)	528, 741
Mva1269I	GAATGC	1 cut(s)	1628
MvnI	CGCG	1 cut(s)	1624
MwoI	GCNNNNNNNGC	5 cut(s)	516, 521, 752, 1418, 1438
NaeI	GCCGGC	1 cut(s)	529
NcoI	CCATGG	1 cut(s)	105
NdeII	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
NgoMIV	GCCGGC	1 cut(s)	527
NlaIII	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
NlaIV	GGNNCC	8 cut(s)	457, 901, 1119, 1184, 1274, 1503, 1618, 1848
NmeAIII	GCCGAG	1 cut(s)	995
NmuCI	GTSAC	1 cut(s)	1880
NspI	RCATGY	3 cut(s)	153, 1204, 1963
PceI	AGGCCT	1 cut(s)	1685
PciSI	GCTCTTC	1 cut(s)	1532
PctI	GAATGC	1 cut(s)	1628
PdiI	GCCGGC	1 cut(s)	529
PdmI	GAANNNNTTC	2 cut(s)	841, 959
PfeI	GAWTC	6 cut(s)	129, 470, 686, 842, 1111, 1855
PflFI	GACNNNGTC	2 cut(s)	437, 1718
PinAI	ACCGGT	1 cut(s)	740
PkrI	GCNGC	4 cut(s)	212, 526, 616, 658
PleI	GAGTC	3 cut(s)	430, 1051, 1480
PpsI	GAGTC	3 cut(s)	430, 1051, 1480
Ppu21I	YACGTR	1 cut(s)	121
PpuMI	RGGWCCY	1 cut(s)	922
Psp5II	RGGWCCY	1 cut(s)	922
PspEI	GGTNACC	1 cut(s)	1880
PspFI	CCCAGC	1 cut(s)	746
PspN4I	GGNNCC	8 cut(s)	457, 901, 1119, 1184, 1274, 1503, 1618, 1848
PspPI	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
PspPPI	RGGWCCY	1 cut(s)	922
PstI	CTGCAG	1 cut(s)	482
PsuI	RGATCY	3 cut(s)	109, 201, 1616
PsyI	GACNNNGTC	2 cut(s)	437, 1718
PvuII	CAGCTG	1 cut(s)	1528
RsaI	GTAC	4 cut(s)	465, 596, 1184, 1496
RsaNI	GTAC	4 cut(s)	464, 595, 1183, 1495
SapI	GCTCTTC	1 cut(s)	1532
SaqAI	TTAA	3 cut(s)	912, 1029, 1374
SatI	GCNGC	4 cut(s)	211, 525, 615, 657
Sau3AI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
Sau96I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
SchI	GAGTC	3 cut(s)	431, 1052, 1480
SduI	GDGCHC	3 cut(s)	415, 701, 1780
SfaNI	GCATC	3 cut(s)	1051, 1114, 1804
SfcI	CTRYAG	1 cut(s)	478
SgrAI	CRCCGGYG	1 cut(s)	740
SinI	GGWCC	2 cut(s)	638, 922
SmlI	CTYRAG	2 cut(s)	533, 926
SmoI	CTYRAG	2 cut(s)	533, 926
Sse9I	AATT	9 cut(s)	316, 603, 915, 958, 1067, 1096, 1156, 1260, 1723
SseBI	AGGCCT	1 cut(s)	1685
SsiI	CCGC	4 cut(s)	525, 1121, 1622, 1935
SspMI	CTAG	9 cut(s)	11, 582, 873, 1217, 1245, 1325, 1394, 1473, 1803
StuI	AGGCCT	1 cut(s)	1685
StyI	CCWWGG	4 cut(s)	105, 163, 1317, 1611
TaaI	ACNGT	6 cut(s)	387, 463, 549, 1021, 1701, 1718
TaiI	ACGT	1 cut(s)	123
TaqI	TCGA	1 cut(s)	833
TaqII	GACCGA	1 cut(s)	1547
TasI	AATT	9 cut(s)	316, 603, 915, 958, 1067, 1096, 1156, 1260, 1723
TatI	WGTACW	1 cut(s)	463
TauI	GCSGC	1 cut(s)	527
TfiI	GAWTC	6 cut(s)	129, 470, 686, 842, 1111, 1855
Tru1I	TTAA	3 cut(s)	912, 1029, 1374
Tru9I	TTAA	3 cut(s)	912, 1029, 1374
TscAI	CASTG	5 cut(s)	466, 499, 1704, 1723, 1824
TseFI	GTSAC	1 cut(s)	1880
TseI	GCWGC	3 cut(s)	210, 614, 656
Tsp45I	GTSAC	1 cut(s)	1880
TspDTI	ATGAA	5 cut(s)	20, 876, 952, 1176, 1878
TspGWI	ACGGA	2 cut(s)	1536, 1655
TspRI	CASTG	5 cut(s)	466, 499, 1704, 1723, 1824
Tth111I	GACNNNGTC	2 cut(s)	437, 1718
VpaK11BI	GGWCC	2 cut(s)	638, 922
XagI	CCTNNNNNAGG	1 cut(s)	929
XapI	RAATTY	4 cut(s)	316, 915, 958, 1067
XbaI	TCTAGA	2 cut(s)	581, 1216
XceI	RCATGY	3 cut(s)	153, 1204, 1963
XmnI	GAANNNNTTC	2 cut(s)	841, 959
XspI	CTAG	9 cut(s)	11, 582, 873, 1217, 1245, 1325, 1394, 1473, 1803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.