Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009218

Physical Location & Seq

Genomic Coordinates Reverse (-)

42793193 .. 42796505

Gene Structure 3313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19841

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGATGAAGCTAGGTGGGTTTCTGTTGTTTGTGTCTCTCTCCCTACAACTCCCTCCCATCTCTACCCAATCCACAAACTCAACCAACACAACCACATCATGCCCCATGGATCTGAGCTACGTGCTTAGAATCCCCTTCAACTCCTCCTCATGCCGAAACTTCCAAGGCCCTCCCAAAACCCCACAAATGGACACCACCCAGATCCCATGCTGCCAAACCCTCTTGTCTCTCTATGGAATAGCCTTTGCCCAACACCTCAAAGAAACCACTCTGTTTCAACTCCCCGACCTATCCACCTCAAACTCCTGCCTCCAGAATTTCCAGTCCAGGCTCACCTCCCTCTCCCTCCCTTCCACTTTGGTCTCCTACTGCTTTGACCCTGCACAGTTTGTCATCGCCCCCAACATCTGTGCCCATATTGAGTCTTCCCAAGACTGGGTCTCTAAGCTCAATGGCACCACTGTACTGGATTCTTCCTGCAGACCAGACCTCACTGATCTCTCCTCCTGCGACGCTTGCGTCGACGCCGGCCTCAAGGTTCAGCAACTGTTGATCGCCGTAGATGGTAACACTTCTCACTCTAGAGATTGTTGGTACTTTACAATTCTTTATGCTGCTGGTATCATCAATGAGTTTGGACCTGAGAGCAATGGTGCTGCCTCTTGTATTTTTGGTTTGTCAATGGATTCTAATGTGGGCTCGCCCAAAAAGAGCAACACAGGTCTTGTTTTCGGCCTCACCGGTGCTGGGGTTGCCGTGTTTGTTATGTCTAGTTTGTTGGGGTTGTATTTTTGGTATGACAGGAGGTGGAGGAACAAAAGGGTTGTTGGGTCGAGAATGGATTCTGGTTTTGATTTGGATGAAAGAGAGGCTAGGATTAGAGTTAGACCCAACACGGGTTCCATTTGGTTTAAAATTCAGGACCTTGAGAAGGCTACTAATAACTTTTCGCAGAAGAATTTCATAGGCCGAGGTGGATTTGGTCTTGTTTACAAGGGTGTTCTATCTGATGGAACTACTGTTGCTGTTAAGAAAGTTATAGAGTCTGATTTTCAAGGGGATGCTGAATTCTGCAATGAGGTTGAGATTATTAGCAATTTGAAGCATCGGAATCTCGTTCCGCTTAGAGGGTGTTGTGTGGTTGAGGGGGAGGACAATTATGAAGAGAGGGGAAGTAATAGGTACCTTGTATATGATTACATGCCGAATGGAAATCTAGATGACCATCTGTCTCTTTCTCTGTCTAGTAGTCAGCGTGGAATTGAAAGGAGGCCCCTGACTTGGCCTCAAAGGAAGGGCATAATCTTGGATGTGGCCAAGGGACTAGCTTATTTGCATTATGGAGTGAAGCCTGCAATATATCACAGAGATATTAAGGCAACAAACATACTACTAGATGTAGATATGAGAGCAAGAGTGGCAGATTTTGGGCTTGCAAAGCAAAGTATGGAAGGCCAGTCTCATCTGACAACTAGAGTGGCAGGGACTCACGGGTACTTGGCCCCTGAATATGCTCTTTACGGACAGCTGACCGAGAAGAGCGATGTTTATAGCTTTGGAGTTGTTGTTTTGGAGATCATGTGTGGGAGAAAAGCTCTTGATCTATCTTCCTTGGGATCCCCGCGAGCATTCTTGATCACAGATTGGGCTTGGTCTTTAGTAAAATCTGGGAAAGTTGAAGAGGCCTTAGACAAATCACTGTTGAAAGAGGGGGACAGTGTCAATTCAAATCCAAAGAGCATAATGGAAAGATTTTTGCTTGTTGGGATTTTGTGTGCTCATGTGATGGTTGCTTTACGGCCTAGCATTTTGGATGCACTGAAAATGTTGGAAGGGGATATTGAGGTTCCACCGATTCCAGATAGGCCAATGCCTCTTGGTCACCCTTCATGTTATGGCGACGGCAATACTTTCAGCATATCACCAGCTTTGAGCGGGCCAAGATTACATAGTGGAGACATGCTCAGGTTTATCGGAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

660

Amino Acids

72.58

Weight (kDa)

6.21

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	29 - 197	1.2e-40	SPARK
Pkinase	PF00069	317 - 534	1.4e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	319 - 530	6e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11050
fragaria_vesca	FvH4_5g29100 FvH4_5g29100 FvH4_5g29100
malus_domestica	MD08G1235700.v1.1 MD15G1427400.v1.1
prunus_persica	Prupe.1G571200_v2.0.a1 Prupe.1G571200_v2.0.a1
pyrus_communis	pycom08g20370 pycom15g37890
rosa_chinensis	RchiOBHm_Chr7g0221741
rosa_laevigata	RLG00000002134
rosa_multiflora	Rmu_co8451303.1_g000001 Rmu_sc0003311.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238080
rosa_rugosa	Rorug07G0203100
rosa_samantha	Rh7AG344000 Rh7BG334500 Rh7CG361400 Rh7DG341800
rosa_wichuraiana	Rw0G003240 Rw7G029170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	518
Acc65I	GGTACC	1 cut(s)	1182
AccB1I	GGYRCC	2 cut(s)	455, 1182
AccBSI	CCGCTC	1 cut(s)	1935
AccI	GTMKAC	1 cut(s)	522
AccII	CGCG	1 cut(s)	1624
AciI	CCGC	3 cut(s)	1121, 1622, 1935
AclWI	GGATC	4 cut(s)	117, 196, 1611, 1624
AcoI	YGGCCR	1 cut(s)	1314
AcsI	RAATTY	4 cut(s)	316, 915, 958, 1067
AcyI	GRCGYC	1 cut(s)	525
AfaI	GTAC	4 cut(s)	465, 596, 1184, 1496
AfiI	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
AgeI	ACCGGT	1 cut(s)	740
AgsI	TTSAA	8 cut(s)	139, 278, 1055, 1102, 1265, 1679, 1705, 1728
AhdI	GACNNNNNGTC	1 cut(s)	1228
AjnI	CCWGG	1 cut(s)	326
AluBI	AGCT	8 cut(s)	10, 117, 448, 1328, 1528, 1554, 1595, 1928
AluI	AGCT	8 cut(s)	10, 117, 448, 1328, 1528, 1554, 1595, 1928
Alw21I	GWGCWC	1 cut(s)	1780
Alw26I	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
AlwI	GGATC	4 cut(s)	117, 196, 1611, 1624
AlwNI	CAGNNNCTG	1 cut(s)	547
ApeKI	GCWGC	3 cut(s)	210, 614, 656
ApoI	RAATTY	4 cut(s)	316, 915, 958, 1067
AsiGI	ACCGGT	1 cut(s)	740
Asp700I	GAANNNNTTC	2 cut(s)	841, 959
Asp718I	GGTACC	1 cut(s)	1182
AspS9I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
AsuHPI	GGTGA	4 cut(s)	325, 730, 1874, 1914
AvaII	GGWCC	2 cut(s)	638, 922
BaeGI	GKGCMC	1 cut(s)	415
BalI	TGGCCA	1 cut(s)	1316
BamHI	GGATCC	1 cut(s)	1616
BanI	GGYRCC	2 cut(s)	455, 1182
BanII	GRGCYC	1 cut(s)	701
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	1 cut(s)	1780
BbvI	GCAGC	3 cut(s)	197, 601, 643
BccI	CCATC	5 cut(s)	65, 557, 1004, 1233, 1780
BceAI	ACGGC	4 cut(s)	542, 740, 1814, 1918
BciT130I	CCWGG	1 cut(s)	328
BclI	TGATCA	1 cut(s)	1635
BcoDI	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
BfmI	CTRYAG	1 cut(s)	478
BisI	GCNGC	3 cut(s)	211, 615, 657
BlsI	GCNGC	3 cut(s)	212, 616, 658
Bme1390I	CCNGG	1 cut(s)	328
Bme18I	GGWCC	2 cut(s)	638, 922
BmeRI	GACNNNNNGTC	1 cut(s)	1228
BmgT120I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
BmiI	GGNNCC	7 cut(s)	457, 901, 1184, 1274, 1503, 1618, 1848
BmrFI	CCNGG	1 cut(s)	328
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	3 cut(s)	1051, 1114, 1804
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	1 cut(s)	417
BplI	GAGNNNNNCTC	4 cut(s)	1579, 1611, 1947, 1979
BpmI	CTGGAG	1 cut(s)	296
Bpu10I	CCTNAGC	1 cut(s)	1964
BpuEI	CTTGAG	2 cut(s)	518, 947
BsaAI	YACGTR	1 cut(s)	121
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaHI	GRCGYC	1 cut(s)	525
BsaI	GGTCTC	2 cut(s)	367, 445
BsaJI	CCNNGG	5 cut(s)	105, 163, 970, 1317, 1611
BsaWI	WCCGGW	1 cut(s)	740
BsaXI	ACNNNNNCTCC	4 cut(s)	1551, 1565, 1581, 1595
Bsc4I	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
Bse118I	RCCGGY	2 cut(s)	527, 740
Bse1I	ACTGG	4 cut(s)	322, 440, 471, 1456
Bse3DI	GCAATG	2 cut(s)	655, 1081
Bse8I	GATNNNNATC	1 cut(s)	1224
BseBI	CCWGG	1 cut(s)	328
BseDI	CCNNGG	5 cut(s)	105, 163, 970, 1317, 1611
BseGI	GGATG	4 cut(s)	865, 1066, 1315, 1819
BseJI	GATNNNNATC	1 cut(s)	1224
BseLI	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
BseMI	GCAATG	2 cut(s)	655, 1081
BseMII	CTCAG	3 cut(s)	104, 633, 1978
BseNI	ACTGG	4 cut(s)	322, 440, 471, 1456
BseRI	GAGGAG	3 cut(s)	133, 136, 493
BseSI	GKGCMC	1 cut(s)	415
BseXI	GCAGC	3 cut(s)	197, 601, 643
BseYI	CCCAGC	1 cut(s)	746
BsgI	GTGCAG	1 cut(s)	366
Bsh1236I	CGCG	1 cut(s)	1624
BshNI	GGYRCC	2 cut(s)	455, 1182
BshTI	ACCGGT	1 cut(s)	740
BsiHKAI	GWGCWC	1 cut(s)	1780
BsiSI	CCGG	2 cut(s)	528, 741
BslFI	GGGAC	3 cut(s)	1335, 1498, 1727
BslI	CCNNNNNNNGG	8 cut(s)	187, 435, 436, 747, 896, 931, 1127, 1281
BsmAI	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
BsmFI	GGGAC	3 cut(s)	1335, 1498, 1727
BsmI	GAATGC	1 cut(s)	1628
Bso31I	GGTCTC	2 cut(s)	367, 445
Bsp1286I	GDGCHC	3 cut(s)	415, 701, 1780
Bsp143I	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
Bsp19I	CCATGG	1 cut(s)	105
BspACI	CCGC	3 cut(s)	1121, 1622, 1935
BspCNI	CTCAG	3 cut(s)	105, 634, 1977
BspFNI	CGCG	1 cut(s)	1624
BspLI	GGNNCC	7 cut(s)	457, 901, 1184, 1274, 1503, 1618, 1848
BspMAI	CTGCAG	1 cut(s)	482
BspPI	GGATC	4 cut(s)	117, 196, 1611, 1624
BspQI	GCTCTTC	1 cut(s)	1532
BspT107I	GGYRCC	2 cut(s)	455, 1182
BspTNI	GGTCTC	2 cut(s)	367, 445
BsrBI	CCGCTC	1 cut(s)	1935
BsrDI	GCAATG	2 cut(s)	655, 1081
BsrFI	RCCGGY	2 cut(s)	527, 740
BsrI	ACTGG	4 cut(s)	322, 440, 471, 1456
BssAI	RCCGGY	2 cut(s)	527, 740
BssECI	CCNNGG	5 cut(s)	105, 163, 970, 1317, 1611
BssMI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
BssNI	GRCGYC	1 cut(s)	525
BssT1I	CCWWGG	4 cut(s)	105, 163, 1317, 1611
Bst2UI	CCWGG	1 cut(s)	328
Bst4CI	ACNGT	6 cut(s)	387, 463, 549, 1021, 1701, 1718
Bst6I	CTCTTC	3 cut(s)	1158, 1532, 1674
BstACI	GRCGYC	1 cut(s)	525
BstBAI	YACGTR	1 cut(s)	121
BstC8I	GCNNGC	7 cut(s)	517, 529, 701, 1353, 1434, 1626, 1937
BstDEI	CTNAG	7 cut(s)	113, 125, 444, 642, 1124, 1687, 1964
BstDSI	CCRYGG	1 cut(s)	105
BstEII	GGTNACC	1 cut(s)	1880
BstENI	CCTNNNNNAGG	1 cut(s)	929
BstF5I	GGATG	4 cut(s)	865, 1066, 1315, 1819
BstFNI	CGCG	1 cut(s)	1624
BstKTI	GATC	8 cut(s)	112, 204, 499, 555, 1578, 1603, 1619, 1638
BstMAI	GTCTC	7 cut(s)	39, 231, 367, 445, 1236, 1464, 1950
BstMBI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
BstMWI	GCNNNNNNNGC	4 cut(s)	516, 752, 1418, 1438
BstNI	CCWGG	1 cut(s)	328
BstNSI	RCATGY	2 cut(s)	1204, 1963
BstPI	GGTNACC	1 cut(s)	1880
BstSCI	CCNGG	1 cut(s)	326
BstSFI	CTRYAG	1 cut(s)	478
BstSLI	GKGCMC	1 cut(s)	415
BstUI	CGCG	1 cut(s)	1624
BstV1I	GCAGC	3 cut(s)	197, 601, 643
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	3 cut(s)	109, 201, 1616
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	3 cut(s)	109, 201, 1616
BtgI	CCRYGG	1 cut(s)	105
BtgZI	GCGATG	2 cut(s)	379, 1557
BtsCI	GGATG	4 cut(s)	865, 1066, 1315, 1819
BtsIMutI	CAGTG	5 cut(s)	459, 492, 1697, 1723, 1817
Cac8I	GCNNGC	7 cut(s)	517, 529, 701, 1353, 1434, 1626, 1937
CaiI	CAGNNNCTG	1 cut(s)	547
Cfr10I	RCCGGY	2 cut(s)	527, 740
Cfr13I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
CseI	GACGC	3 cut(s)	508, 521, 533
Csp6I	GTAC	4 cut(s)	464, 595, 1183, 1495
CspAI	ACCGGT	1 cut(s)	740
CspCI	CAANNNNNGTGG	2 cut(s)	1458, 1493
CviAII	CATG	9 cut(s)	99, 106, 150, 207, 1201, 1579, 1781, 1890, 1960
CviQI	GTAC	4 cut(s)	464, 595, 1183, 1495
DdeI	CTNAG	7 cut(s)	113, 125, 444, 642, 1124, 1687, 1964
DpnI	GATC	8 cut(s)	111, 203, 498, 554, 1577, 1602, 1618, 1637
DpnII	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
DraI	TTTAAA	1 cut(s)	913
DrdI	GACNNNNNNGTC	1 cut(s)	518
DriI	GACNNNNNGTC	1 cut(s)	1228
DseDI	GACNNNNNNGTC	1 cut(s)	518
EaeI	YGGCCR	1 cut(s)	1314
Eam1104I	CTCTTC	3 cut(s)	1158, 1532, 1674
Eam1105I	GACNNNNNGTC	1 cut(s)	1228
EarI	CTCTTC	3 cut(s)	1158, 1532, 1674
Eco130I	CCWWGG	4 cut(s)	105, 163, 1317, 1611
Eco147I	AGGCCT	1 cut(s)	1685
Eco24I	GRGCYC	1 cut(s)	701
Eco31I	GGTCTC	2 cut(s)	367, 445
Eco47I	GGWCC	2 cut(s)	638, 922
Eco91I	GGTNACC	1 cut(s)	1880
EcoNI	CCTNNNNNAGG	1 cut(s)	929
EcoO109I	RGGNCCY	3 cut(s)	167, 922, 1272
EcoO65I	GGTNACC	1 cut(s)	1880
EcoRI	GAATTC	1 cut(s)	1067
EcoRII	CCWGG	1 cut(s)	326
EcoT14I	CCWWGG	4 cut(s)	105, 163, 1317, 1611
EcoT38I	GRGCYC	1 cut(s)	701
ErhI	CCWWGG	4 cut(s)	105, 163, 1317, 1611
FaeI	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
FaqI	GGGAC	3 cut(s)	1335, 1498, 1727
FatI	CATG	9 cut(s)	98, 105, 149, 206, 1200, 1578, 1780, 1889, 1959
FauI	CCCGC	2 cut(s)	1629, 1928
FbaI	TGATCA	1 cut(s)	1635
FblI	GTMKAC	1 cut(s)	522
Fnu4HI	GCNGC	3 cut(s)	211, 615, 657
FokI	GGATG	4 cut(s)	872, 1073, 1322, 1826
FriOI	GRGCYC	1 cut(s)	701
Fsp4HI	GCNGC	3 cut(s)	211, 615, 657
GluI	GCNGC	3 cut(s)	211, 615, 657
GsaI	CCCAGC	1 cut(s)	750
GsuI	CTGGAG	1 cut(s)	296
HapII	CCGG	2 cut(s)	528, 741
HgaI	GACGC	3 cut(s)	508, 521, 533
Hin1I	GRCGYC	1 cut(s)	525
Hin1II	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
HincII	GTYRAC	1 cut(s)	523
HindII	GTYRAC	1 cut(s)	523
HinfI	GANTC	9 cut(s)	129, 422, 470, 686, 842, 1043, 1111, 1486, 1855
HpaII	CCGG	2 cut(s)	528, 741
HphI	GGTGA	4 cut(s)	325, 730, 1874, 1914
Hpy166II	GTNNAC	2 cut(s)	523, 991
Hpy188I	TCNGA	6 cut(s)	114, 1009, 1048, 1110, 1467, 1976
Hpy188III	TCNNGA	8 cut(s)	313, 582, 834, 920, 1217, 1598, 1633, 1859
Hpy8I	GTNNAC	2 cut(s)	523, 991
Hpy99I	CGWCG	4 cut(s)	515, 524, 527, 1904
HpyAV	CCTTC	7 cut(s)	145, 360, 925, 1288, 1445, 1826, 1896
HpyCH4III	ACNGT	6 cut(s)	387, 463, 549, 1021, 1701, 1718
HpyCH4IV	ACGT	1 cut(s)	120
HpyCH4V	TGCA	7 cut(s)	383, 480, 1074, 1336, 1355, 1436, 1817
HpyF10VI	GCNNNNNNNGC	4 cut(s)	516, 752, 1418, 1438
HpyF3I	CTNAG	7 cut(s)	113, 125, 444, 642, 1124, 1687, 1964
HpySE526I	ACGT	1 cut(s)	120
Hsp92I	GRCGYC	1 cut(s)	525
Hsp92II	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
KpnI	GGTACC	1 cut(s)	1186
KroI	GCCGGC	1 cut(s)	527
KroNI	GCCGGC	1 cut(s)	529
Ksp22I	TGATCA	1 cut(s)	1635
Kzo9I	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
LguI	GCTCTTC	1 cut(s)	1532
Lsp1109I	GCAGC	3 cut(s)	197, 601, 643
LweI	GCATC	3 cut(s)	1051, 1114, 1804
MaeII	ACGT	1 cut(s)	120
MaeIII	GTNAC	2 cut(s)	566, 1880
MalI	GATC	8 cut(s)	111, 203, 498, 554, 1577, 1602, 1618, 1637
MbiI	CCGCTC	1 cut(s)	1935
MboI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
MboII	GAAGA	7 cut(s)	417, 465, 967, 1175, 1549, 1599, 1691
MflI	RGATCY	3 cut(s)	109, 201, 1616
MhlI	GDGCHC	3 cut(s)	415, 701, 1780
MlsI	TGGCCA	1 cut(s)	1316
MluCI	AATT	9 cut(s)	316, 603, 915, 958, 1067, 1096, 1156, 1260, 1723
MluNI	TGGCCA	1 cut(s)	1316
MlyI	GAGTC	3 cut(s)	431, 1052, 1480
MmeI	TCCRAC	1 cut(s)	1809
Mox20I	TGGCCA	1 cut(s)	1316
MroNI	GCCGGC	1 cut(s)	527
MroXI	GAANNNNTTC	2 cut(s)	841, 959
MscI	TGGCCA	1 cut(s)	1316
MseI	TTAA	3 cut(s)	912, 1029, 1374
Msp20I	TGGCCA	1 cut(s)	1316
MspA1I	CMGCKG	1 cut(s)	1528
MspI	CCGG	2 cut(s)	528, 741
MspR9I	CCNGG	1 cut(s)	328
Mva1269I	GAATGC	1 cut(s)	1628
MvaI	CCWGG	1 cut(s)	328
MvnI	CGCG	1 cut(s)	1624
MwoI	GCNNNNNNNGC	4 cut(s)	516, 752, 1418, 1438
NaeI	GCCGGC	1 cut(s)	529
NcoI	CCATGG	1 cut(s)	105
NdeII	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
NgoMIV	GCCGGC	1 cut(s)	527
NlaIII	CATG	9 cut(s)	102, 109, 153, 210, 1204, 1582, 1784, 1893, 1963
NlaIV	GGNNCC	7 cut(s)	457, 901, 1184, 1274, 1503, 1618, 1848
NmeAIII	GCCGAG	1 cut(s)	995
NmuCI	GTSAC	1 cut(s)	1880
NspI	RCATGY	2 cut(s)	1204, 1963
PceI	AGGCCT	1 cut(s)	1685
PciSI	GCTCTTC	1 cut(s)	1532
PcsI	WCGNNNNNNNCGW	1 cut(s)	519
PctI	GAATGC	1 cut(s)	1628
PdiI	GCCGGC	1 cut(s)	529
PdmI	GAANNNNTTC	2 cut(s)	841, 959
PfeI	GAWTC	6 cut(s)	129, 470, 686, 842, 1111, 1855
PflFI	GACNNNGTC	2 cut(s)	437, 1718
PinAI	ACCGGT	1 cut(s)	740
PkrI	GCNGC	3 cut(s)	212, 616, 658
PleI	GAGTC	3 cut(s)	430, 1051, 1480
PpsI	GAGTC	3 cut(s)	430, 1051, 1480
Ppu21I	YACGTR	1 cut(s)	121
PpuMI	RGGWCCY	1 cut(s)	922
Psp5II	RGGWCCY	1 cut(s)	922
Psp6I	CCWGG	1 cut(s)	326
PspEI	GGTNACC	1 cut(s)	1880
PspFI	CCCAGC	1 cut(s)	746
PspGI	CCWGG	1 cut(s)	326
PspN4I	GGNNCC	7 cut(s)	457, 901, 1184, 1274, 1503, 1618, 1848
PspPI	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
PspPPI	RGGWCCY	1 cut(s)	922
PstI	CTGCAG	1 cut(s)	482
PstNI	CAGNNNCTG	1 cut(s)	547
PsuI	RGATCY	3 cut(s)	109, 201, 1616
PsyI	GACNNNGTC	2 cut(s)	437, 1718
PvuII	CAGCTG	1 cut(s)	1528
RsaI	GTAC	4 cut(s)	465, 596, 1184, 1496
RsaNI	GTAC	4 cut(s)	464, 595, 1183, 1495
SalI	GTCGAC	1 cut(s)	521
SapI	GCTCTTC	1 cut(s)	1532
SaqAI	TTAA	3 cut(s)	912, 1029, 1374
SatI	GCNGC	3 cut(s)	211, 615, 657
Sau3AI	GATC	8 cut(s)	109, 201, 496, 552, 1575, 1600, 1616, 1635
Sau96I	GGNCC	6 cut(s)	167, 638, 922, 1272, 1501, 1937
SchI	GAGTC	3 cut(s)	431, 1052, 1480
ScrFI	CCNGG	1 cut(s)	328
SduI	GDGCHC	3 cut(s)	415, 701, 1780
SfaNI	GCATC	3 cut(s)	1051, 1114, 1804
SfcI	CTRYAG	1 cut(s)	478
SgrAI	CRCCGGYG	1 cut(s)	740
SgrDI	CGTCGACG	1 cut(s)	521
SinI	GGWCC	2 cut(s)	638, 922
SmlI	CTYRAG	2 cut(s)	533, 926
SmoI	CTYRAG	2 cut(s)	533, 926
Sse9I	AATT	9 cut(s)	316, 603, 915, 958, 1067, 1096, 1156, 1260, 1723
SseBI	AGGCCT	1 cut(s)	1685
SsiI	CCGC	3 cut(s)	1121, 1622, 1935
StuI	AGGCCT	1 cut(s)	1685
StyD4I	CCNGG	1 cut(s)	326
StyI	CCWWGG	4 cut(s)	105, 163, 1317, 1611
TaaI	ACNGT	6 cut(s)	387, 463, 549, 1021, 1701, 1718
TaiI	ACGT	1 cut(s)	123
TaqI	TCGA	2 cut(s)	522, 833
TaqII	GACCGA	1 cut(s)	1547
TasI	AATT	9 cut(s)	316, 603, 915, 958, 1067, 1096, 1156, 1260, 1723
TatI	WGTACW	1 cut(s)	463
TfiI	GAWTC	6 cut(s)	129, 470, 686, 842, 1111, 1855
Tru1I	TTAA	3 cut(s)	912, 1029, 1374
Tru9I	TTAA	3 cut(s)	912, 1029, 1374
TscAI	CASTG	5 cut(s)	466, 499, 1704, 1723, 1824
TseFI	GTSAC	1 cut(s)	1880
TseI	GCWGC	3 cut(s)	210, 614, 656
Tsp45I	GTSAC	1 cut(s)	1880
TspDTI	ATGAA	5 cut(s)	20, 876, 952, 1176, 1878
TspGWI	ACGGA	1 cut(s)	1536
TspRI	CASTG	5 cut(s)	466, 499, 1704, 1723, 1824
Tth111I	GACNNNGTC	2 cut(s)	437, 1718
VpaK11BI	GGWCC	2 cut(s)	638, 922
XagI	CCTNNNNNAGG	1 cut(s)	929
XapI	RAATTY	4 cut(s)	316, 915, 958, 1067
XbaI	TCTAGA	2 cut(s)	581, 1216
XceI	RCATGY	2 cut(s)	1204, 1963
XmiI	GTMKAC	1 cut(s)	522
XmnI	GAANNNNTTC	2 cut(s)	841, 959

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.