AT1G11540

Sulfite exporter TauE SafE family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0009375
Physical Location & Seq
Reverse (-)
3875442 .. 3877323
1882 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G11540.1

Sequence Viewer

Length: 1104 bp
ATGACAATCATCGCCGGTCTCGAAATGAAAACAGCTTCAAGCTTCTCAGCGTTCATGGTAACCGGCGTCTCTTTCGCTAACGTGGGATGCAATCTTTTCCTGAGAAACCCTAAATCAAGAGACAAAACCCTAATCGACTTCGATTTAGCTCTTACTATTCAGCCATGTCTACTTCTCGGAGTAAGTATTGGTGTGATCTGTAACCGTATGTTCCCAAATTGGCTTGTGTTGTTTCTCTTCGCTGTGTTCCTCGCCTGGTCAACGATGAAGACTTGTAAAAAGGGAGTTTCTTACTGGAATTTGGAGTCGGAAAGAGCGAAGATTAAGAGTCCAAGAGACGTTGATGGCATCGAGGTAGCGAGATCGCCGCTTCTGAGTGAAGAAAGAGAAGATGTGAGACAGAGAGGGATGATTAGGTTTCCATGGATGAAGCTTGGAGTTTTAGTGATCATTTGGTTATTGTTCTTCTCTATTAATCTTTTCCGCGGAAACAAATACGGTCAGGGAATCATATCGATCAAGCCATGTGGAGCTCTCTACTGGTTCCTCTCCTCGCTTCAAATACCTCTCACTATCTTCTTTACTCTCTGCATTTACTTCAGTGACAATGTTCAAAGCAACCACACATCGCATAGTAACCAAAACTCTGAACAGGAGACTGGAGTTGGAGGAAGACAAAACAAGTTGATGCTCCCTGTAATGGCTCTCTTGGCTGGAGTTTTGGGTGGCCTCTTTGGTATTGGTGGTGGAATGCTCATTAGTCCTCTTCTTCTCCAAATCGGTATTGCTCCAGAGGTAACTGCAGCTACATGTTCGTTCATGGTTTTGTTTTCTTCATCAATGTCTGCAATCCAGTACCTACTACTAGGCATGGAACATGCTGGAACCGCTGCGATATTTGCTCTGGTCTGTTTCGTGGCATCACTGGTTGGACTAATGGTGGTTAAGAAGGTTATAGCCAAGTATGGGAGGGCTTCGATCATTGTGTTTGCAGTTGGTATCGTCATGGCACTTAGCACTGTACTGATGACAACCCATGGAGCTTTTAATGTTTGGAATGATTTTGTCTCTGGTCGCTACATGGGTTTCAAATTACCCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

367

Amino Acids

40.27

Weight (kDa)

9.31

Isoelectric Point (pI)

28.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 184 - 337 1.4e-11 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 169
AccII CGCG 1 cut(s) 486
AciI CCGC 4 cut(s) 368, 484, 486, 888
AcsI RAATTY 1 cut(s) 298
AcuI CTGAAG 1 cut(s) 583
AcyI GRCGYC 1 cut(s) 66
AfaI GTAC 2 cut(s) 857, 1023
AfiI CCNNNNNNNGG 2 cut(s) 700, 966
AflIII ACRYGT 1 cut(s) 809
AgsI TTSAA 4 cut(s) 39, 560, 614, 1090
AjnI CCWGG 1 cut(s) 254
AluBI AGCT 7 cut(s) 35, 42, 149, 433, 533, 806, 1043
AluI AGCT 7 cut(s) 35, 42, 149, 433, 533, 806, 1043
Alw21I GWGCWC 1 cut(s) 535
Alw26I GTCTC 7 cut(s) 23, 73, 114, 330, 391, 650, 1072
AoxI GGCC 1 cut(s) 727
ApeKI GCWGC 2 cut(s) 803, 890
ApoI RAATTY 1 cut(s) 298
AseI ATTAAT 1 cut(s) 474
BanII GRGCYC 1 cut(s) 535
BbsI GAAGAC 2 cut(s) 275, 679
Bbv12I GWGCWC 1 cut(s) 535
BbvI GCAGC 2 cut(s) 815, 877
BccI CCATC 1 cut(s) 338
BciT130I CCWGG 1 cut(s) 256
BclI TGATCA 1 cut(s) 447
BcoDI GTCTC 7 cut(s) 23, 73, 114, 330, 391, 650, 1072
BfaI CTAG 1 cut(s) 866
BfmI CTRYAG 1 cut(s) 801
BisI GCNGC 3 cut(s) 368, 804, 891
BlsI GCNGC 3 cut(s) 369, 805, 892
Bme1390I CCNGG 1 cut(s) 256
BmiI GGNNCC 2 cut(s) 545, 886
BmrFI CCNGG 1 cut(s) 256
BmsI GCATC 4 cut(s) 77, 357, 678, 929
BpiI GAAGAC 2 cut(s) 275, 679
BpmI CTGGAG 3 cut(s) 681, 735, 774
Bsa29I ATCGAT 1 cut(s) 515
BsaHI GRCGYC 1 cut(s) 66
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 422, 484, 1036
BsaXI ACNNNNNCTCC 2 cut(s) 429, 459
Bsc4I CCNNNNNNNGG 2 cut(s) 700, 966
Bse118I RCCGGY 2 cut(s) 14, 62
Bse1I ACTGG 5 cut(s) 299, 545, 664, 853, 930
BseBI CCWGG 1 cut(s) 256
BseCI ATCGAT 1 cut(s) 515
BseDI CCNNGG 3 cut(s) 422, 484, 1036
BseGI GGATG 3 cut(s) 92, 414, 432
BseLI CCNNNNNNNGG 2 cut(s) 700, 966
BseMII CTCAG 3 cut(s) 60, 92, 365
BseNI ACTGG 5 cut(s) 299, 545, 664, 853, 930
BseRI GAGGAG 1 cut(s) 541
BseXI GCAGC 2 cut(s) 815, 877
Bsh1236I CGCG 1 cut(s) 486
BshFI GGCC 1 cut(s) 729
BshVI ATCGAT 1 cut(s) 515
BsiHKAI GWGCWC 1 cut(s) 535
BsiSI CCGG 2 cut(s) 15, 63
BslI CCNNNNNNNGG 2 cut(s) 700, 966
BsmAI GTCTC 7 cut(s) 23, 73, 114, 330, 391, 650, 1072
BsmBI CGTCTC 2 cut(s) 73, 330
BsmI GAATGC 1 cut(s) 756
BsnI GGCC 1 cut(s) 729
Bso31I GGTCTC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 535
Bsp143I GATC 5 cut(s) 195, 362, 447, 516, 978
Bsp19I CCATGG 2 cut(s) 422, 1036
BspACI CCGC 4 cut(s) 368, 484, 486, 888
BspANI GGCC 1 cut(s) 729
BspCNI CTCAG 3 cut(s) 59, 93, 366
BspDI ATCGAT 1 cut(s) 515
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 2 cut(s) 545, 886
BspMAI CTGCAG 1 cut(s) 805
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 2 cut(s) 14, 62
BsrI ACTGG 5 cut(s) 299, 545, 664, 853, 930
BssAI RCCGGY 2 cut(s) 14, 62
BssECI CCNNGG 3 cut(s) 422, 484, 1036
BssMI GATC 5 cut(s) 195, 362, 447, 516, 978
BssNI GRCGYC 1 cut(s) 66
BssT1I CCWWGG 2 cut(s) 422, 1036
Bst2UI CCWGG 1 cut(s) 256
Bst4CI ACNGT 3 cut(s) 206, 500, 1021
Bst6I CTCTTC 2 cut(s) 242, 771
BstACI GRCGYC 1 cut(s) 66
BstDEI CTNAG 4 cut(s) 46, 101, 374, 1013
BstDSI CCRYGG 3 cut(s) 422, 484, 1036
BstEII GGTNACC 1 cut(s) 58
BstF5I GGATG 3 cut(s) 92, 414, 432
BstFNI CGCG 1 cut(s) 486
BstKTI GATC 5 cut(s) 198, 365, 450, 519, 981
BstMAI GTCTC 7 cut(s) 23, 73, 114, 330, 391, 650, 1072
BstMBI GATC 5 cut(s) 195, 362, 447, 516, 978
BstMWI GCNNNNNNNGC 3 cut(s) 710, 887, 899
BstNI CCWGG 1 cut(s) 256
BstNSI RCATGY 2 cut(s) 813, 881
BstPI GGTNACC 1 cut(s) 58
BstSCI CCNGG 1 cut(s) 254
BstSFI CTRYAG 1 cut(s) 801
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 2 cut(s) 815, 877
BstV2I GAAGAC 2 cut(s) 275, 679
Bsu15I ATCGAT 1 cut(s) 515
BsuRI GGCC 1 cut(s) 729
BsuTUI ATCGAT 1 cut(s) 515
BtgI CCRYGG 3 cut(s) 422, 484, 1036
BtgZI GCGATG 1 cut(s) 612
BtsCI GGATG 3 cut(s) 92, 414, 432
BtsIMutI CAGTG 3 cut(s) 607, 923, 1017
Cfr10I RCCGGY 2 cut(s) 14, 62
Cfr42I CCGCGG 1 cut(s) 487
ClaI ATCGAT 1 cut(s) 515
CseI GACGC 1 cut(s) 55
Csp6I GTAC 2 cut(s) 856, 1022
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviQI GTAC 2 cut(s) 856, 1022
DdeI CTNAG 4 cut(s) 46, 101, 374, 1013
DpnI GATC 5 cut(s) 197, 364, 449, 518, 980
DpnII GATC 5 cut(s) 195, 362, 447, 516, 978
Eam1104I CTCTTC 2 cut(s) 242, 771
EarI CTCTTC 2 cut(s) 242, 771
Ecl136II GAGCTC 1 cut(s) 533
Eco130I CCWWGG 2 cut(s) 422, 1036
Eco24I GRGCYC 1 cut(s) 535
Eco31I GGTCTC 1 cut(s) 23
Eco53kI GAGCTC 1 cut(s) 533
Eco57I CTGAAG 1 cut(s) 583
Eco91I GGTNACC 1 cut(s) 58
EcoICRI GAGCTC 1 cut(s) 533
EcoO65I GGTNACC 1 cut(s) 58
EcoRII CCWGG 1 cut(s) 254
EcoT14I CCWWGG 2 cut(s) 422, 1036
EcoT38I GRGCYC 1 cut(s) 535
ErhI CCWWGG 2 cut(s) 422, 1036
Esp3I CGTCTC 2 cut(s) 73, 330
FbaI TGATCA 1 cut(s) 447
FblI GTMKAC 1 cut(s) 169
Fnu4HI GCNGC 3 cut(s) 368, 804, 891
FokI GGATG 3 cut(s) 99, 421, 439
FriOI GRGCYC 1 cut(s) 535
Fsp4HI GCNGC 3 cut(s) 368, 804, 891
FspBI CTAG 1 cut(s) 866
GluI GCNGC 3 cut(s) 368, 804, 891
GsuI CTGGAG 3 cut(s) 681, 735, 774
HaeIII GGCC 1 cut(s) 729
HapII CCGG 2 cut(s) 15, 63
HgaI GACGC 1 cut(s) 55
Hin1I GRCGYC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 261
HindII GTYRAC 1 cut(s) 261
HindIII AAGCTT 2 cut(s) 40, 431
HinfI GANTC 3 cut(s) 305, 328, 507
HpaII CCGG 2 cut(s) 15, 63
Hpy166II GTNNAC 2 cut(s) 170, 261
Hpy188I TCNGA 4 cut(s) 179, 310, 375, 649
Hpy188III TCNNGA 4 cut(s) 20, 100, 117, 791
Hpy8I GTNNAC 2 cut(s) 170, 261
HpyAV CCTTC 1 cut(s) 943
HpyCH4III ACNGT 3 cut(s) 206, 500, 1021
HpyCH4IV ACGT 2 cut(s) 81, 339
HpyCH4V TGCA 5 cut(s) 90, 591, 803, 848, 992
HpyF10VI GCNNNNNNNGC 3 cut(s) 710, 887, 899
HpyF3I CTNAG 4 cut(s) 46, 101, 374, 1013
HpySE526I ACGT 2 cut(s) 81, 339
Hsp92I GRCGYC 1 cut(s) 66
Ksp22I TGATCA 1 cut(s) 447
KspI CCGCGG 1 cut(s) 487
Kzo9I GATC 5 cut(s) 195, 362, 447, 516, 978
LmnI GCTCC 4 cut(s) 530, 696, 793, 1040
Lsp1109I GCAGC 2 cut(s) 815, 877
LweI GCATC 4 cut(s) 77, 357, 678, 929
MaeI CTAG 1 cut(s) 866
MaeII ACGT 2 cut(s) 81, 339
MaeIII GTNAC 5 cut(s) 58, 200, 602, 635, 796
MalI GATC 5 cut(s) 197, 364, 449, 518, 980
MboI GATC 5 cut(s) 195, 362, 447, 516, 978
MhlI GDGCHC 1 cut(s) 535
MluCI AATT 3 cut(s) 217, 298, 1091
MlyI GAGTC 2 cut(s) 314, 337
MmeI TCCRAC 3 cut(s) 288, 646, 910
MseI TTAA 5 cut(s) 324, 474, 945, 1047, 1102
MspA1I CMGCKG 2 cut(s) 486, 890
MspI CCGG 2 cut(s) 15, 63
MspR9I CCNGG 1 cut(s) 256
Mva1269I GAATGC 1 cut(s) 756
MvaI CCWGG 1 cut(s) 256
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 3 cut(s) 710, 887, 899
NcoI CCATGG 2 cut(s) 422, 1036
NdeII GATC 5 cut(s) 195, 362, 447, 516, 978
NlaIV GGNNCC 2 cut(s) 545, 886
NmuCI GTSAC 1 cut(s) 602
NspI RCATGY 2 cut(s) 813, 881
PciI ACATGT 1 cut(s) 809
PcsI WCGNNNNNNNCGW 2 cut(s) 18, 314
PctI GAATGC 1 cut(s) 756
PfeI GAWTC 1 cut(s) 507
PkrI GCNGC 3 cut(s) 369, 805, 892
PleI GAGTC 2 cut(s) 313, 336
PpsI GAGTC 2 cut(s) 313, 336
PscI ACATGT 1 cut(s) 809
PshBI ATTAAT 1 cut(s) 474
Psp124BI GAGCTC 1 cut(s) 535
Psp6I CCWGG 1 cut(s) 254
PspEI GGTNACC 1 cut(s) 58
PspGI CCWGG 1 cut(s) 254
PspN4I GGNNCC 2 cut(s) 545, 886
PstI CTGCAG 1 cut(s) 805
RsaI GTAC 2 cut(s) 857, 1023
RsaNI GTAC 2 cut(s) 856, 1022
SacI GAGCTC 1 cut(s) 535
SacII CCGCGG 1 cut(s) 487
SaqAI TTAA 5 cut(s) 324, 474, 945, 1047, 1102
SatI GCNGC 3 cut(s) 368, 804, 891
Sau3AI GATC 5 cut(s) 195, 362, 447, 516, 978
SchI GAGTC 2 cut(s) 314, 337
ScrFI CCNGG 1 cut(s) 256
SduI GDGCHC 1 cut(s) 535
SfaNI GCATC 4 cut(s) 77, 357, 678, 929
SfcI CTRYAG 1 cut(s) 801
Sfr303I CCGCGG 1 cut(s) 487
SgrBI CCGCGG 1 cut(s) 487
Sse9I AATT 3 cut(s) 217, 298, 1091
SsiI CCGC 4 cut(s) 368, 484, 486, 888
SspMI CTAG 1 cut(s) 866
SstI GAGCTC 1 cut(s) 535
StyD4I CCNGG 1 cut(s) 254
StyI CCWWGG 2 cut(s) 422, 1036
TaaI ACNGT 3 cut(s) 206, 500, 1021
TaiI ACGT 2 cut(s) 84, 342
TaqI TCGA 6 cut(s) 21, 135, 141, 351, 515, 977
TasI AATT 3 cut(s) 217, 298, 1091
TatI WGTACW 1 cut(s) 1021
TauI GCSGC 1 cut(s) 370
TfiI GAWTC 1 cut(s) 507
Tru1I TTAA 5 cut(s) 324, 474, 945, 1047, 1102
Tru9I TTAA 5 cut(s) 324, 474, 945, 1047, 1102
TscAI CASTG 3 cut(s) 607, 930, 1024
TseFI GTSAC 1 cut(s) 602
TseI GCWGC 2 cut(s) 803, 890
Tsp45I GTSAC 1 cut(s) 602
TspDTI ATGAA 6 cut(s) 41, 43, 281, 443, 808, 825
TspRI CASTG 3 cut(s) 607, 930, 1024
VspI ATTAAT 1 cut(s) 474
XapI RAATTY 1 cut(s) 298
XceI RCATGY 2 cut(s) 813, 881
XmiI GTMKAC 1 cut(s) 169
XspI CTAG 1 cut(s) 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.