Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0009375

Physical Location & Seq

Genomic Coordinates Reverse (-)

45858154 .. 45860169

Gene Structure 2016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1336700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGGACAACCAAAAACTCACATGCTTAACTCTTTCCCTTTCAATATTTCTCATCACCTTCACTCATTCACAAGCAAAACAAACTGAACCCATCTCAGACGCCCTCAGAACCGACAACTTCCTCAACCAAACCTACCAATGGCTGAGCCACCAAAGAGCACAGCTCCAAGAAACCCAGTTCAAATTCTCAGCCCCCATTGTCCTTGCCGGAATATTCTGCTTCATAGCCGCCTCCATATCAAGTGCCGGCGGAATCGGGGGTGGCGGGCTCTTCATCCCTATACTAACCCTAGTGGCAGGCCTAGACCTCAGAACAGCCTCAAGTCTCTCAGCTTTCATGGTCACAGGAGGGTCAGTTGCAAATGTTATGTACAACTTGTGCATCAAAAGTTCCAAATTTGGAGGCAAAAGTCTGATAGATTATGACATAGCTCTTCTATCAGAGCCATGCATGTTGCTCGGAGTGAGCCTTGGAGTGATTTGCAACCTAGCTTTTCCAGAGTGGCTGACTACTATTCTCTTTGCTCTATTTCTTGCTTGGTGTACCTCAAGGAGCTGCAAAAATGGGTTGGTGCGTTGGGAAATGGAGTCAGAAGAGCTGTTGCGGTTGAGAAATGATGGTGAATATTTGGAGCAAAAGGAAATAGAGGCACCCCTTTTGGGGACAAAAGGAAATTGCAAACTAGGGATTCCATGGAAAAAAATGGGGGTCTTAGTTCTGGTTTGGTGCTCTTTCTGCCTCGTCTATCTTCTCCGCGGTAATCGGTATGGACAGGGTATCACACAAATAGAGCCTTGTGGAATGGCTTATTGGGTTCTCTCATCAATCCAAATCCCTCTTGCCATAATCTATACAGCCTGGATGCTATGCAAAAAAGAGAACCTTCAACCTCATACTTTAAACCAAAAGGATATTCAGGACCTGCAAAATGTTGGACCATCGAAGCTAGTTTTCCCATCAATGGCACTACTAGCAGGGATTTTGGGGGGTGTTTTTGGGATCGGAGGTGGAATGCTTATAAGCCCTCTTCTTCTTCAAGTTGGGGTAGCACCTGAGGTAACGGCGGCAACTTGTTCGTTCATGGTATTCTTCTCGTCTTCCATGTCGGCATTTCAGTACTTGTTACTGGGCATGGAGCACGCAGATACTGCACTCATCTTCGCCATCGTGTGCTTCGTTGCATCGCTTCTTGGACTGGTGGTGCTGCAGAGAGCAATCAAAGTGTATGGAAGGGCTTCTCTAATTGTGTTCTCAGTTAGTATAGTGATGGCTTTGAGCACTGTTCTGATGACTACCTTTGGGGCTCTTGAAGTGTGGAGAGATTTTGTATCTGGAAATTACATGGGATTCAAACAACCATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TauE

Protein Analysis

455

Amino Acids

49.55

Weight (kDa)

7.85

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TauE	PF01925	59 - 179	8.8e-11	Sulfite exporter TauE/SafE
TauE	PF01925	280 - 422	2.2e-12	Sulfite exporter TauE/SafE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11540 AT1G11540 AT1G61740 AT4G21250 AT4G21260
fragaria_vesca	FvH4_3g02900 FvH4_3g02900
malus_domestica	MD05G1336700.v1.1
prunus_persica	Prupe.4G028900_v2.0.a1
pyrus_communis	pycom05g30810 pycom05g30830
rosa_chinensis	RchiOBHm_Chr5g0004461
rosa_laevigata	RLG00000031230
rosa_multiflora	Rmu_sc0000433.1_g000002 Rmu_sc0002453.1_g000002
rosa_roxburghii	Rroxscaffold_1G00071060
rosa_rugosa	Rorug04G0411900
rosa_samantha	Rh5AG039500 Rh5BG038500 Rh5CG042600 Rh5DG038300
rosa_wichuraiana	Rw5G003770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1019
Acc36I	ACCTGC	1 cut(s)	930
AccB1I	GGYRCC	1 cut(s)	649
AccII	CGCG	1 cut(s)	756
AciI	CCGC	7 cut(s)	228, 249, 264, 604, 754, 756, 1064
AclWI	GGATC	1 cut(s)	1007
AcsI	RAATTY	2 cut(s)	182, 395
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	3 cut(s)	371, 544, 1118
AfiI	CCNNNNNNNGG	4 cut(s)	138, 659, 660, 961
AgsI	TTSAA	6 cut(s)	42, 181, 887, 1037, 1310, 1351
AjnI	CCWGG	1 cut(s)	857
AjuI	GAANNNNNNNTTGG	4 cut(s)	793, 825, 897, 929
AluBI	AGCT	7 cut(s)	163, 332, 431, 491, 555, 598, 946
AluI	AGCT	7 cut(s)	163, 332, 431, 491, 555, 598, 946
Alw21I	GWGCWC	4 cut(s)	160, 731, 1140, 1280
Alw26I	GTCTC	1 cut(s)	329
AlwI	GGATC	1 cut(s)	1007
AlwNI	CAGNNNCTG	2 cut(s)	922, 1148
AoxI	GGCC	1 cut(s)	298
ApeKI	GCWGC	2 cut(s)	555, 1204
ApoI	RAATTY	2 cut(s)	182, 395
Asp700I	GAANNNNTTC	1 cut(s)	1234
AspS9I	GGNCC	2 cut(s)	919, 935
AsuHPI	GGTGA	2 cut(s)	46, 632
AvaII	GGWCC	2 cut(s)	919, 935
AxyI	CCTNAGG	1 cut(s)	1053
BanI	GGYRCC	1 cut(s)	649
BanII	GRGCYC	2 cut(s)	270, 1306
BbsI	GAAGAC	1 cut(s)	1089
Bbv12I	GWGCWC	4 cut(s)	160, 731, 1140, 1280
BbvI	GCAGC	2 cut(s)	542, 1191
BccI	CCATC	6 cut(s)	98, 611, 946, 964, 1172, 1261
BceAI	ACGGC	1 cut(s)	1077
BcgI	CGANNNNNNTGC	4 cut(s)	439, 473, 1056, 1090
BciT130I	CCWGG	1 cut(s)	859
BcoDI	GTCTC	1 cut(s)	329
BfaI	CTAG	6 cut(s)	290, 302, 488, 683, 947, 971
BfmI	CTRYAG	1 cut(s)	1205
BfuAI	ACCTGC	1 cut(s)	930
BisI	GCNGC	4 cut(s)	228, 556, 1065, 1205
BlpI	GCTNAGC	1 cut(s)	143
BlsI	GCNGC	4 cut(s)	229, 557, 1066, 1206
BmcAI	AGTACT	1 cut(s)	1118
Bme1390I	CCNGG	1 cut(s)	859
Bme18I	GGWCC	2 cut(s)	919, 935
BmgT120I	GGNCC	2 cut(s)	919, 935
BmiI	GGNNCC	1 cut(s)	651
BmrFI	CCNGG	1 cut(s)	859
BmrI	ACTGGG	2 cut(s)	169, 1136
BmsI	GCATC	3 cut(s)	390, 852, 1190
BmuI	ACTGGG	2 cut(s)	169, 1136
BpiI	GAAGAC	1 cut(s)	1089
BplI	GAGNNNNNCTC	2 cut(s)	147, 179
Bpu1102I	GCTNAGC	1 cut(s)	143
BpuEI	CTTGAG	2 cut(s)	304, 532
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	3 cut(s)	469, 692, 754
BsaXI	ACNNNNNCTCC	2 cut(s)	339, 369
Bsc4I	CCNNNNNNNGG	4 cut(s)	138, 659, 660, 961
Bse118I	RCCGGY	1 cut(s)	245
Bse1I	ACTGG	3 cut(s)	175, 1131, 1200
Bse21I	CCTNAGG	1 cut(s)	1053
BseBI	CCWGG	1 cut(s)	859
BseDI	CCNNGG	3 cut(s)	469, 692, 754
BseGI	GGATG	2 cut(s)	273, 867
BseLI	CCNNNNNNNGG	4 cut(s)	138, 659, 660, 961
BseMII	CTCAG	8 cut(s)	108, 118, 134, 201, 322, 342, 1044, 1266
BseNI	ACTGG	3 cut(s)	175, 1131, 1200
BseXI	GCAGC	2 cut(s)	542, 1191
BsgI	GTGCAG	1 cut(s)	1134
Bsh1236I	CGCG	1 cut(s)	756
BshFI	GGCC	1 cut(s)	300
BshNI	GGYRCC	1 cut(s)	649
BsiHKAI	GWGCWC	4 cut(s)	160, 731, 1140, 1280
BsiSI	CCGG	2 cut(s)	207, 246
BslFI	GGGAC	1 cut(s)	676
BslI	CCNNNNNNNGG	4 cut(s)	138, 659, 660, 961
BsmAI	GTCTC	1 cut(s)	329
BsmFI	GGGAC	1 cut(s)	676
BsmI	GAATGC	1 cut(s)	1017
BsnI	GGCC	1 cut(s)	300
Bsp1286I	GDGCHC	6 cut(s)	160, 270, 731, 1140, 1280, 1306
Bsp1407I	TGTACA	1 cut(s)	369
Bsp143I	GATC	1 cut(s)	999
Bsp1720I	GCTNAGC	1 cut(s)	143
Bsp19I	CCATGG	1 cut(s)	692
BspACI	CCGC	7 cut(s)	228, 249, 264, 604, 754, 756, 1064
BspANI	GGCC	1 cut(s)	300
BspCNI	CTCAG	8 cut(s)	107, 117, 135, 200, 321, 341, 1045, 1265
BspFNI	CGCG	1 cut(s)	756
BspLI	GGNNCC	1 cut(s)	651
BspMAI	CTGCAG	1 cut(s)	1209
BspMI	ACCTGC	1 cut(s)	930
BspPI	GGATC	1 cut(s)	1007
BspQI	GCTCTTC	3 cut(s)	275, 438, 588
BspT107I	GGYRCC	1 cut(s)	649
BsrFI	RCCGGY	1 cut(s)	245
BsrGI	TGTACA	1 cut(s)	369
BsrI	ACTGG	3 cut(s)	175, 1131, 1200
BssAI	RCCGGY	1 cut(s)	245
BssECI	CCNNGG	3 cut(s)	469, 692, 754
BssMI	GATC	1 cut(s)	999
BssNI	GRCGYC	1 cut(s)	99
BssT1I	CCWWGG	2 cut(s)	469, 692
Bst2UI	CCWGG	1 cut(s)	859
Bst4CI	ACNGT	1 cut(s)	1282
Bst6I	CTCTTC	4 cut(s)	275, 438, 588, 1032
BstACI	GRCGYC	1 cut(s)	99
BstAPI	GCANNNNNTGC	1 cut(s)	1148
BstAUI	TGTACA	1 cut(s)	369
BstC8I	GCNNGC	4 cut(s)	247, 266, 298, 1140
BstDEI	CTNAG	9 cut(s)	94, 104, 143, 187, 308, 328, 712, 1053, 1252
BstDSI	CCRYGG	2 cut(s)	692, 754
BstF5I	GGATG	2 cut(s)	273, 867
BstFNI	CGCG	1 cut(s)	756
BstKTI	GATC	1 cut(s)	1002
BstMAI	GTCTC	1 cut(s)	329
BstMBI	GATC	1 cut(s)	999
BstMWI	GCNNNNNNNGC	3 cut(s)	735, 971, 1148
BstNI	CCWGG	1 cut(s)	859
BstNSI	RCATGY	2 cut(s)	24, 454
BstSCI	CCNGG	1 cut(s)	857
BstSFI	CTRYAG	1 cut(s)	1205
BstUI	CGCG	1 cut(s)	756
BstV1I	GCAGC	2 cut(s)	542, 1191
BstV2I	GAAGAC	1 cut(s)	1089
Bsu36I	CCTNAGG	1 cut(s)	1053
BsuRI	GGCC	1 cut(s)	300
BtgI	CCRYGG	2 cut(s)	692, 754
BtgZI	GCGATG	1 cut(s)	1167
BtsCI	GGATG	2 cut(s)	273, 867
BtsIMutI	CAGTG	1 cut(s)	1278
BveI	ACCTGC	1 cut(s)	930
Cac8I	GCNNGC	4 cut(s)	247, 266, 298, 1140
CaiI	CAGNNNCTG	2 cut(s)	922, 1148
Cfr10I	RCCGGY	1 cut(s)	245
Cfr13I	GGNCC	2 cut(s)	919, 935
Cfr42I	CCGCGG	1 cut(s)	757
CseI	GACGC	1 cut(s)	107
Csp6I	GTAC	3 cut(s)	370, 543, 1117
CviQI	GTAC	3 cut(s)	370, 543, 1117
DdeI	CTNAG	9 cut(s)	94, 104, 143, 187, 308, 328, 712, 1053, 1252
DpnI	GATC	1 cut(s)	1001
DpnII	GATC	1 cut(s)	999
DraI	TTTAAA	1 cut(s)	900
Eam1104I	CTCTTC	4 cut(s)	275, 438, 588, 1032
EarI	CTCTTC	4 cut(s)	275, 438, 588, 1032
EciI	GGCGGA	1 cut(s)	264
Eco130I	CCWWGG	2 cut(s)	469, 692
Eco147I	AGGCCT	1 cut(s)	300
Eco24I	GRGCYC	2 cut(s)	270, 1306
Eco47I	GGWCC	2 cut(s)	919, 935
Eco81I	CCTNAGG	1 cut(s)	1053
EcoO109I	RGGNCCY	1 cut(s)	919
EcoRII	CCWGG	1 cut(s)	857
EcoT14I	CCWWGG	2 cut(s)	469, 692
EcoT22I	ATGCAT	1 cut(s)	452
EcoT38I	GRGCYC	2 cut(s)	270, 1306
ErhI	CCWWGG	2 cut(s)	469, 692
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	1 cut(s)	676
FauI	CCCGC	1 cut(s)	257
Fnu4HI	GCNGC	4 cut(s)	228, 556, 1065, 1205
FokI	GGATG	2 cut(s)	260, 874
FriOI	GRGCYC	2 cut(s)	270, 1306
Fsp4HI	GCNGC	4 cut(s)	228, 556, 1065, 1205
FspBI	CTAG	6 cut(s)	290, 302, 488, 683, 947, 971
GluI	GCNGC	4 cut(s)	228, 556, 1065, 1205
HaeIII	GGCC	1 cut(s)	300
HapII	CCGG	2 cut(s)	207, 246
HgaI	GACGC	1 cut(s)	107
Hin1I	GRCGYC	1 cut(s)	99
HinfI	GANTC	4 cut(s)	252, 587, 688, 1347
HpaII	CCGG	2 cut(s)	207, 246
HphI	GGTGA	2 cut(s)	46, 632
Hpy166II	GTNNAC	1 cut(s)	543
Hpy188I	TCNGA	9 cut(s)	97, 107, 311, 414, 442, 461, 592, 1004, 1287
Hpy188III	TCNNGA	4 cut(s)	497, 917, 1307, 1332
Hpy8I	GTNNAC	1 cut(s)	543
HpyAV	CCTTC	3 cut(s)	67, 893, 1224
HpyCH4III	ACNGT	1 cut(s)	1282
HpyF10VI	GCNNNNNNNGC	3 cut(s)	735, 971, 1148
HpyF3I	CTNAG	9 cut(s)	94, 104, 143, 187, 308, 328, 712, 1053, 1252
Hsp92I	GRCGYC	1 cut(s)	99
KroI	GCCGGC	1 cut(s)	245
KroNI	GCCGGC	1 cut(s)	247
KspI	CCGCGG	1 cut(s)	757
Kzo9I	GATC	1 cut(s)	999
LguI	GCTCTTC	3 cut(s)	275, 438, 588
LmnI	GCTCC	4 cut(s)	168, 552, 631, 1135
Lsp1109I	GCAGC	2 cut(s)	542, 1191
LweI	GCATC	3 cut(s)	390, 852, 1190
MaeI	CTAG	6 cut(s)	290, 302, 488, 683, 947, 971
MaeIII	GTNAC	3 cut(s)	340, 1057, 1122
MalI	GATC	1 cut(s)	1001
MboI	GATC	1 cut(s)	999
MhlI	GDGCHC	6 cut(s)	160, 270, 731, 1140, 1280, 1306
MluCI	AATT	5 cut(s)	182, 395, 673, 1242, 1336
MlyI	GAGTC	1 cut(s)	596
MmeI	TCCRAC	1 cut(s)	913
Mph1103I	ATGCAT	1 cut(s)	452
MroNI	GCCGGC	1 cut(s)	245
MroXI	GAANNNNTTC	1 cut(s)	1234
MseI	TTAA	3 cut(s)	26, 899, 1363
MspA1I	CMGCKG	1 cut(s)	756
MspI	CCGG	2 cut(s)	207, 246
MspR9I	CCNGG	1 cut(s)	859
Mva1269I	GAATGC	1 cut(s)	1017
MvaI	CCWGG	1 cut(s)	859
MvnI	CGCG	1 cut(s)	756
MwoI	GCNNNNNNNGC	3 cut(s)	735, 971, 1148
NaeI	GCCGGC	1 cut(s)	247
NcoI	CCATGG	1 cut(s)	692
NdeII	GATC	1 cut(s)	999
NgoMIV	GCCGGC	1 cut(s)	245
NlaIV	GGNNCC	1 cut(s)	651
NmuCI	GTSAC	1 cut(s)	340
NsiI	ATGCAT	1 cut(s)	452
NspI	RCATGY	2 cut(s)	24, 454
PceI	AGGCCT	1 cut(s)	300
PciSI	GCTCTTC	3 cut(s)	275, 438, 588
PcsI	WCGNNNNNNNCGW	1 cut(s)	1173
PctI	GAATGC	1 cut(s)	1017
PdiI	GCCGGC	1 cut(s)	247
PdmI	GAANNNNTTC	1 cut(s)	1234
PfeI	GAWTC	3 cut(s)	252, 688, 1347
PkrI	GCNGC	4 cut(s)	229, 557, 1066, 1206
PleI	GAGTC	1 cut(s)	595
PpsI	GAGTC	1 cut(s)	595
PpuMI	RGGWCCY	1 cut(s)	919
PsiI	TTATAA	1 cut(s)	1019
Psp5II	RGGWCCY	1 cut(s)	919
Psp6I	CCWGG	1 cut(s)	857
PspGI	CCWGG	1 cut(s)	857
PspN4I	GGNNCC	1 cut(s)	651
PspPI	GGNCC	2 cut(s)	919, 935
PspPPI	RGGWCCY	1 cut(s)	919
PstI	CTGCAG	1 cut(s)	1209
PstNI	CAGNNNCTG	2 cut(s)	922, 1148
RsaI	GTAC	3 cut(s)	371, 544, 1118
RsaNI	GTAC	3 cut(s)	370, 543, 1117
SacII	CCGCGG	1 cut(s)	757
SapI	GCTCTTC	3 cut(s)	275, 438, 588
SaqAI	TTAA	3 cut(s)	26, 899, 1363
SatI	GCNGC	4 cut(s)	228, 556, 1065, 1205
Sau3AI	GATC	1 cut(s)	999
Sau96I	GGNCC	2 cut(s)	919, 935
ScaI	AGTACT	1 cut(s)	1118
SchI	GAGTC	1 cut(s)	596
ScrFI	CCNGG	1 cut(s)	859
SduI	GDGCHC	6 cut(s)	160, 270, 731, 1140, 1280, 1306
SfaNI	GCATC	3 cut(s)	390, 852, 1190
SfcI	CTRYAG	1 cut(s)	1205
Sfr303I	CCGCGG	1 cut(s)	757
SgrBI	CCGCGG	1 cut(s)	757
SinI	GGWCC	2 cut(s)	919, 935
SmlI	CTYRAG	2 cut(s)	319, 547
SmoI	CTYRAG	2 cut(s)	319, 547
Sse9I	AATT	5 cut(s)	182, 395, 673, 1242, 1336
SseBI	AGGCCT	1 cut(s)	300
SsiI	CCGC	7 cut(s)	228, 249, 264, 604, 754, 756, 1064
SspI	AATATT	3 cut(s)	45, 213, 626
SspMI	CTAG	6 cut(s)	290, 302, 488, 683, 947, 971
StuI	AGGCCT	1 cut(s)	300
StyD4I	CCNGG	1 cut(s)	857
StyI	CCWWGG	2 cut(s)	469, 692
TaaI	ACNGT	1 cut(s)	1282
TaqI	TCGA	1 cut(s)	941
TasI	AATT	5 cut(s)	182, 395, 673, 1242, 1336
TatI	WGTACW	2 cut(s)	369, 1116
TauI	GCSGC	2 cut(s)	230, 1067
TfiI	GAWTC	3 cut(s)	252, 688, 1347
Tru1I	TTAA	3 cut(s)	26, 899, 1363
Tru9I	TTAA	3 cut(s)	26, 899, 1363
TscAI	CASTG	1 cut(s)	1285
TseFI	GTSAC	1 cut(s)	340
TseI	GCWGC	2 cut(s)	555, 1204
Tsp45I	GTSAC	1 cut(s)	340
TspDTI	ATGAA	4 cut(s)	211, 262, 325, 1069
TspRI	CASTG	1 cut(s)	1285
VpaK11BI	GGWCC	2 cut(s)	919, 935
XapI	RAATTY	2 cut(s)	182, 395
XceI	RCATGY	2 cut(s)	24, 454
XmnI	GAANNNNTTC	1 cut(s)	1234
XspI	CTAG	6 cut(s)	290, 302, 488, 683, 947, 971
ZrmI	AGTACT	1 cut(s)	1118
Zsp2I	ATGCAT	1 cut(s)	452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.