Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009375

Physical Location & Seq

Genomic Coordinates Forward (+)

11324987 .. 11326958

Gene Structure 1972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G21250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGAAGACCCTATTTGTCCTTTTTCTTCTCCTTCTCTGTGTTTTCGCGATCAACGCAAATCAAGAAGAAGAGAACCTACCACAATCTCATCATAATCTGCTTCACAAAGTCCAACAATGGAGAACATCTCTGAAAGAATCAAGTGCTGCAGAACTCAAGCTATCTTCAGCAATCATTATGGCCGGAGTGTTATGTTTCCTAGCTGCCTTAATCTCGAGCGCAGGTGGAATCGGCGGTGGAGGTTTATTCATTCCTATCATGACTATAGTTGCAGGGGTTGACTTGAAAACCGCGTCAAGCTTCTCTGCTTTTATGGTAACCGGGGGATCAATTGCTAATGTAATCAGCAATCTCTTTGGTGGTAAAGCATTGCTTGATTACGACTTAGCCTTGCTTCTTGAGCCTTGTATGCTTTTAGGAGTAAGTATTGGTGTTATCTGCAACAGAGTTTTGCCTGAATGGCTCATCACTGTTCTTTTCGCTGTGTTCCTCGCTTGGTCTAGCTTGAAGACTTGTAGAAGTGGAGTCAAGTTTTGGAAACTTGAGTCTGAGATTGCGAGAGAATCAGGACATGGGAGGCCCGAGAGAGGACAAGGCCAAATAGAGGAGGAGACTAAGAACCTTAAAGCACCTTTACTTGAAGCTCAAGCGACCAAAAACAAATCAAAGATTCCATGGACGAAACTTGGTGTCTTGGTTATTGTTTGGGCGTCTTTCTTTGTTATTTATCTTCTCCGTGGAAACAAAGATGGCAAGGGAATTATAACTATAAAGCCTTGTGGTGTGGAGTATTGGATTCTGCTTTCACTTCAGATACCTCTTGCTTTGATTTTCACAAAGTTGGCTCTTTCAAGAACCGAAAGTCGCCAAGAACAATCCCCTAACGATCAGAAAAATCAAGAAGGTACAAGACTGGACAAGTCCACGCGGTTAAAGTTCCCGGCGATGTCCTTTTTAGCCGGTTTATTAGGAGGTATATTTGGTATTGGAGGTGGAATGCTTATAAGCCCTCTTCTTCTTCAATCTGGGATACCACCACAGATAACAGCAGCGACAACTTCTTTCATGGTGTTCTTCTCAGCAACAATGTCTGCAGTCCAGTACCTGCTACTAGGAATGCAAAACACAGACACAGCTTATGTATTTTCCTTTATTTGCTTCCTTGCTTCACTTCTTGGACTGGTTTTGGTTCAGAAAGCTGTAGCTCAGTTTGGAAGAGCTTCCATTATAGTTTTCTCGGTTGGAACCGTGATGTCTCTGAGCACAGTCCTTATGACAAGTTTTGGAGCTCTTGATGTCTGGACTGATTACGTGGCAGGCAAGGACATGGGTTTCAAGCTGCCATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TauE

Protein Analysis

449

Amino Acids

48.58

Weight (kDa)

9.02

Isoelectric Point (pI)

33.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TauE	PF01925	2 - 170	9.6e-16	Sulfite exporter TauE/SafE
TauE	PF01925	268 - 414	5.6e-15	Sulfite exporter TauE/SafE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11540 AT1G11540 AT1G61740 AT4G21250 AT4G21260
fragaria_vesca	FvH4_3g02900 FvH4_3g02900
malus_domestica	MD05G1336700.v1.1
prunus_persica	Prupe.4G028900_v2.0.a1
pyrus_communis	pycom05g30810 pycom05g30830
rosa_chinensis	RchiOBHm_Chr5g0004461
rosa_laevigata	RLG00000031230
rosa_multiflora	Rmu_sc0000433.1_g000002 Rmu_sc0002453.1_g000002
rosa_roxburghii	Rroxscaffold_1G00071060
rosa_rugosa	Rorug04G0411900
rosa_samantha	Rh5AG039500 Rh5BG038500 Rh5CG042600 Rh5DG038300
rosa_wichuraiana	Rw5G003770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	764, 1004
AarI	CACCTGC	1 cut(s)	212
Acc36I	ACCTGC	2 cut(s)	212, 1113
AccII	CGCG	3 cut(s)	47, 293, 928
AciI	CCGC	3 cut(s)	234, 291, 928
AclWI	GGATC	1 cut(s)	334
AcoI	YGGCCR	1 cut(s)	180
AcuI	CTGAAG	2 cut(s)	150, 794
AcyI	GRCGYC	1 cut(s)	710
AfaI	GTAC	2 cut(s)	907, 1103
AfiI	CCNNNNNNNGG	2 cut(s)	587, 604
AgsI	TTSAA	6 cut(s)	286, 508, 641, 852, 1022, 1336
Alw21I	GWGCWC	2 cut(s)	1265, 1291
Alw26I	GTCTC	2 cut(s)	605, 1260
AlwI	GGATC	1 cut(s)	334
AlwNI	CAGNNNCTG	1 cut(s)	1105
Ama87I	CYCGRG	2 cut(s)	214, 581
AoxI	GGCC	3 cut(s)	180, 578, 595
ApeKI	GCWGC	4 cut(s)	146, 203, 1049, 1339
Asp700I	GAANNNNTTC	1 cut(s)	1219
AspLEI	GCGC	1 cut(s)	221
AspS9I	GGNCC	1 cut(s)	579
AsuC2I	CCSGG	2 cut(s)	322, 941
AvaI	CYCGRG	2 cut(s)	214, 581
BanII	GRGCYC	1 cut(s)	1291
BarI	GAAGNNNNNNTAC	2 cut(s)	60, 92
BbsI	GAAGAC	2 cut(s)	11, 515
Bbv12I	GWGCWC	2 cut(s)	1265, 1291
BbvI	GCAGC	4 cut(s)	133, 190, 1061, 1326
BccI	CCATC	1 cut(s)	743
BciVI	GTATCC	1 cut(s)	1023
BcnI	CCSGG	2 cut(s)	322, 941
BcoDI	GTCTC	2 cut(s)	605, 1260
BfaI	CTAG	3 cut(s)	200, 501, 1112
BfmI	CTRYAG	4 cut(s)	147, 264, 1092, 1200
BfuAI	ACCTGC	2 cut(s)	212, 1113
BfuI	GTATCC	1 cut(s)	1023
BglI	GCCNNNNNGGC	1 cut(s)	460
BisI	GCNGC	4 cut(s)	147, 204, 1050, 1340
BlsI	GCNGC	4 cut(s)	148, 205, 1051, 1341
Bme1390I	CCNGG	2 cut(s)	322, 941
BmeT110I	CYCGRG	2 cut(s)	214, 581
BmgT120I	GGNCC	1 cut(s)	579
BmiI	GGNNCC	1 cut(s)	1246
BmrFI	CCNGG	2 cut(s)	322, 941
BpiI	GAAGAC	2 cut(s)	11, 515
BplI	GAGNNNNNCTC	2 cut(s)	112, 144
BpuEI	CTTGAG	4 cut(s)	140, 419, 563, 630
BpuMI	CCSGG	2 cut(s)	322, 941
BsaAI	YACGTR	1 cut(s)	1312
BsaHI	GRCGYC	1 cut(s)	710
BsaJI	CCNNGG	3 cut(s)	321, 674, 736
Bsc4I	CCNNNNNNNGG	2 cut(s)	587, 604
Bse118I	RCCGGY	1 cut(s)	959
Bse1I	ACTGG	3 cut(s)	918, 1099, 1185
Bse3DI	GCAATG	1 cut(s)	368
BseDI	CCNNGG	3 cut(s)	321, 674, 736
BseLI	CCNNNNNNNGG	2 cut(s)	587, 604
BseMI	GCAATG	1 cut(s)	368
BseMII	CTCAG	4 cut(s)	540, 1092, 1220, 1250
BseNI	ACTGG	3 cut(s)	918, 1099, 1185
BseRI	GAGGAG	2 cut(s)	620, 623
BseXI	GCAGC	4 cut(s)	133, 190, 1061, 1326
Bsh1236I	CGCG	3 cut(s)	47, 293, 928
BshFI	GGCC	3 cut(s)	182, 580, 597
BsiHKAI	GWGCWC	2 cut(s)	1265, 1291
BsiHKCI	CYCGRG	2 cut(s)	214, 581
BsiSI	CCGG	4 cut(s)	183, 321, 941, 960
BslI	CCNNNNNNNGG	2 cut(s)	587, 604
BsmAI	GTCTC	2 cut(s)	605, 1260
BsmI	GAATGC	2 cut(s)	1002, 1122
BsnI	GGCC	3 cut(s)	182, 580, 597
BsoBI	CYCGRG	2 cut(s)	214, 581
Bsp1286I	GDGCHC	2 cut(s)	1265, 1291
Bsp143I	GATC	3 cut(s)	48, 326, 886
Bsp19I	CCATGG	1 cut(s)	674
Bsp68I	TCGCGA	1 cut(s)	47
BspACI	CCGC	3 cut(s)	234, 291, 928
BspANI	GGCC	3 cut(s)	182, 580, 597
BspCNI	CTCAG	4 cut(s)	541, 1091, 1219, 1251
BspFNI	CGCG	3 cut(s)	47, 293, 928
BspHI	TCATGA	1 cut(s)	258
BspLI	GGNNCC	1 cut(s)	1246
BspMAI	CTGCAG	2 cut(s)	151, 1096
BspMI	ACCTGC	2 cut(s)	212, 1113
BspPI	GGATC	1 cut(s)	334
BspQI	GCTCTTC	1 cut(s)	1210
BsrDI	GCAATG	1 cut(s)	368
BsrFI	RCCGGY	1 cut(s)	959
BsrI	ACTGG	3 cut(s)	918, 1099, 1185
BssAI	RCCGGY	1 cut(s)	959
BssECI	CCNNGG	3 cut(s)	321, 674, 736
BssMI	GATC	3 cut(s)	48, 326, 886
BssNI	GRCGYC	1 cut(s)	710
BssT1I	CCWWGG	1 cut(s)	674
Bst4CI	ACNGT	3 cut(s)	472, 1249, 1267
Bst6I	CTCTTC	3 cut(s)	63, 1017, 1210
BstACI	GRCGYC	1 cut(s)	710
BstBAI	YACGTR	1 cut(s)	1312
BstC8I	GCNNGC	1 cut(s)	1318
BstDEI	CTNAG	6 cut(s)	385, 549, 615, 1078, 1206, 1259
BstDSI	CCRYGG	2 cut(s)	674, 736
BstEII	GGTNACC	1 cut(s)	316
BstFNI	CGCG	3 cut(s)	47, 293, 928
BstHHI	GCGC	1 cut(s)	221
BstKTI	GATC	3 cut(s)	51, 329, 889
BstMAI	GTCTC	2 cut(s)	605, 1260
BstMBI	GATC	3 cut(s)	48, 326, 886
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 400, 409, 460
BstPI	GGTNACC	1 cut(s)	316
BstSCI	CCNGG	2 cut(s)	320, 939
BstSFI	CTRYAG	4 cut(s)	147, 264, 1092, 1200
BstUI	CGCG	3 cut(s)	47, 293, 928
BstV1I	GCAGC	4 cut(s)	133, 190, 1061, 1326
BstV2I	GAAGAC	2 cut(s)	11, 515
BsuI	GTATCC	1 cut(s)	1023
BsuRI	GGCC	3 cut(s)	182, 580, 597
BtgI	CCRYGG	2 cut(s)	674, 736
BtgZI	GCGATG	1 cut(s)	959
BtsIMutI	CAGTG	1 cut(s)	468
BtuMI	TCGCGA	1 cut(s)	47
BveI	ACCTGC	2 cut(s)	212, 1113
Cac8I	GCNNGC	1 cut(s)	1318
CaiI	CAGNNNCTG	1 cut(s)	1105
CciI	TCATGA	1 cut(s)	258
CfoI	GCGC	1 cut(s)	221
Cfr10I	RCCGGY	1 cut(s)	959
Cfr13I	GGNCC	1 cut(s)	579
CseI	GACGC	2 cut(s)	282, 699
Csp6I	GTAC	2 cut(s)	906, 1102
CviAII	CATG	6 cut(s)	259, 572, 675, 1066, 1327, 1344
CviQI	GTAC	2 cut(s)	906, 1102
DdeI	CTNAG	6 cut(s)	385, 549, 615, 1078, 1206, 1259
DpnI	GATC	3 cut(s)	50, 328, 888
DpnII	GATC	3 cut(s)	48, 326, 886
EaeI	YGGCCR	1 cut(s)	180
Eam1104I	CTCTTC	3 cut(s)	63, 1017, 1210
EarI	CTCTTC	3 cut(s)	63, 1017, 1210
Ecl136II	GAGCTC	1 cut(s)	1289
Eco130I	CCWWGG	1 cut(s)	674
Eco24I	GRGCYC	1 cut(s)	1291
Eco53kI	GAGCTC	1 cut(s)	1289
Eco57I	CTGAAG	2 cut(s)	150, 794
Eco88I	CYCGRG	2 cut(s)	214, 581
Eco91I	GGTNACC	1 cut(s)	316
EcoICRI	GAGCTC	1 cut(s)	1289
EcoO65I	GGTNACC	1 cut(s)	316
EcoT14I	CCWWGG	1 cut(s)	674
EcoT38I	GRGCYC	1 cut(s)	1291
ErhI	CCWWGG	1 cut(s)	674
FaeI	CATG	6 cut(s)	262, 575, 678, 1069, 1330, 1347
FalI	AAGNNNNNCTT	2 cut(s)	357, 389
FatI	CATG	6 cut(s)	258, 571, 674, 1065, 1326, 1343
Fnu4HI	GCNGC	4 cut(s)	147, 204, 1050, 1340
FriOI	GRGCYC	1 cut(s)	1291
Fsp4HI	GCNGC	4 cut(s)	147, 204, 1050, 1340
FspBI	CTAG	3 cut(s)	200, 501, 1112
GlaI	GCGC	1 cut(s)	220
GluI	GCNGC	4 cut(s)	147, 204, 1050, 1340
HaeIII	GGCC	3 cut(s)	182, 580, 597
HapII	CCGG	4 cut(s)	183, 321, 941, 960
HgaI	GACGC	2 cut(s)	282, 699
HhaI	GCGC	1 cut(s)	221
Hin1I	GRCGYC	1 cut(s)	710
Hin1II	CATG	6 cut(s)	262, 575, 678, 1069, 1330, 1347
Hin6I	GCGC	1 cut(s)	219
HinP1I	GCGC	1 cut(s)	219
HincII	GTYRAC	1 cut(s)	280
HindII	GTYRAC	1 cut(s)	280
HindIII	AAGCTT	1 cut(s)	298
HinfI	GANTC	7 cut(s)	137, 228, 525, 545, 563, 670, 796
HpaII	CCGG	4 cut(s)	183, 321, 941, 960
Hpy166II	GTNNAC	2 cut(s)	280, 924
Hpy188I	TCNGA	6 cut(s)	132, 550, 813, 891, 1194, 1260
Hpy8I	GTNNAC	2 cut(s)	280, 924
HpyAV	CCTTC	2 cut(s)	41, 896
HpyCH4III	ACNGT	3 cut(s)	472, 1249, 1267
HpyCH4IV	ACGT	1 cut(s)	1311
HpyCH4V	TGCA	5 cut(s)	149, 272, 441, 1094, 1120
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 400, 409, 460
HpyF3I	CTNAG	6 cut(s)	385, 549, 615, 1078, 1206, 1259
HpySE526I	ACGT	1 cut(s)	1311
Hsp92I	GRCGYC	1 cut(s)	710
Hsp92II	CATG	6 cut(s)	262, 575, 678, 1069, 1330, 1347
HspAI	GCGC	1 cut(s)	219
Kzo9I	GATC	3 cut(s)	48, 326, 886
LguI	GCTCTTC	1 cut(s)	1210
LmnI	GCTCC	1 cut(s)	1286
Lsp1109I	GCAGC	4 cut(s)	133, 190, 1061, 1326
MaeI	CTAG	3 cut(s)	200, 501, 1112
MaeII	ACGT	1 cut(s)	1311
MaeIII	GTNAC	1 cut(s)	316
MalI	GATC	3 cut(s)	50, 328, 888
MboI	GATC	3 cut(s)	48, 326, 886
MfeI	CAATTG	1 cut(s)	330
MhlI	GDGCHC	2 cut(s)	1265, 1291
MluCI	AATT	2 cut(s)	330, 759
MlyI	GAGTC	2 cut(s)	534, 554
MmeI	TCCRAC	2 cut(s)	136, 1222
MroXI	GAANNNNTTC	1 cut(s)	1219
MseI	TTAA	4 cut(s)	209, 624, 932, 1348
MspI	CCGG	4 cut(s)	183, 321, 941, 960
MspR9I	CCNGG	2 cut(s)	322, 941
MunI	CAATTG	1 cut(s)	330
Mva1269I	GAATGC	2 cut(s)	1002, 1122
MvnI	CGCG	3 cut(s)	47, 293, 928
MwoI	GCNNNNNNNGC	4 cut(s)	53, 400, 409, 460
NciI	CCSGG	2 cut(s)	322, 941
NcoI	CCATGG	1 cut(s)	674
NdeII	GATC	3 cut(s)	48, 326, 886
NlaIII	CATG	6 cut(s)	262, 575, 678, 1069, 1330, 1347
NlaIV	GGNNCC	1 cut(s)	1246
NruI	TCGCGA	1 cut(s)	47
PaeR7I	CTCGAG	1 cut(s)	214
PagI	TCATGA	1 cut(s)	258
PaqCI	CACCTGC	1 cut(s)	212
PciSI	GCTCTTC	1 cut(s)	1210
PctI	GAATGC	2 cut(s)	1002, 1122
PdmI	GAANNNNTTC	1 cut(s)	1219
PfeI	GAWTC	5 cut(s)	137, 228, 563, 670, 796
PkrI	GCNGC	4 cut(s)	148, 205, 1051, 1341
PleI	GAGTC	2 cut(s)	533, 553
PpsI	GAGTC	2 cut(s)	533, 553
Ppu21I	YACGTR	1 cut(s)	1312
PsiI	TTATAA	2 cut(s)	764, 1004
Psp124BI	GAGCTC	1 cut(s)	1291
PspEI	GGTNACC	1 cut(s)	316
PspN4I	GGNNCC	1 cut(s)	1246
PspPI	GGNCC	1 cut(s)	579
PstI	CTGCAG	2 cut(s)	151, 1096
PstNI	CAGNNNCTG	1 cut(s)	1105
RruI	TCGCGA	1 cut(s)	47
RsaI	GTAC	2 cut(s)	907, 1103
RsaNI	GTAC	2 cut(s)	906, 1102
SacI	GAGCTC	1 cut(s)	1291
SapI	GCTCTTC	1 cut(s)	1210
SaqAI	TTAA	4 cut(s)	209, 624, 932, 1348
SatI	GCNGC	4 cut(s)	147, 204, 1050, 1340
Sau3AI	GATC	3 cut(s)	48, 326, 886
Sau96I	GGNCC	1 cut(s)	579
SchI	GAGTC	2 cut(s)	534, 554
ScrFI	CCNGG	2 cut(s)	322, 941
SduI	GDGCHC	2 cut(s)	1265, 1291
SfcI	CTRYAG	4 cut(s)	147, 264, 1092, 1200
Sfr274I	CTCGAG	1 cut(s)	214
SlaI	CTCGAG	1 cut(s)	214
SmlI	CTYRAG	5 cut(s)	155, 214, 398, 542, 645
SmoI	CTYRAG	5 cut(s)	155, 214, 398, 542, 645
Sse9I	AATT	2 cut(s)	330, 759
SsiI	CCGC	3 cut(s)	234, 291, 928
SspMI	CTAG	3 cut(s)	200, 501, 1112
SstI	GAGCTC	1 cut(s)	1291
StyD4I	CCNGG	2 cut(s)	320, 939
StyI	CCWWGG	1 cut(s)	674
TaaI	ACNGT	3 cut(s)	472, 1249, 1267
TaiI	ACGT	1 cut(s)	1314
TaqI	TCGA	1 cut(s)	215
TasI	AATT	2 cut(s)	330, 759
TfiI	GAWTC	5 cut(s)	137, 228, 563, 670, 796
Tru1I	TTAA	4 cut(s)	209, 624, 932, 1348
Tru9I	TTAA	4 cut(s)	209, 624, 932, 1348
TscAI	CASTG	1 cut(s)	475
TseI	GCWGC	4 cut(s)	146, 203, 1049, 1339
TspDTI	ATGAA	3 cut(s)	17, 238, 1054
TspGWI	ACGGA	1 cut(s)	725
TspRI	CASTG	1 cut(s)	475
XhoI	CTCGAG	1 cut(s)	214
XmnI	GAANNNNTTC	1 cut(s)	1219
XspI	CTAG	3 cut(s)	200, 501, 1112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.