Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013994

Physical Location & Seq

Genomic Coordinates Forward (+)

4877506 .. 4879307

Gene Structure 1802 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGGTGACCTTAACTTCATCTTCTTCAACTCCAAACGTATCTTTTGATTTCATGATGAACAATAATAATAACAGTAACAATCTCTATGGTCCTTTCTCTTCTTCTTCTACTTCTTTCTCTTACTTGACAAGCAAGGAAGATGCTCTCACCCAGAAGAACCTAATGAGTGGTATCACCAATGATGTTCTTGGAATTAACAAGAAAGCTTCTGAAGATTTGGAGATCAGTGTGTTTGGAGCTGAGAAGTACTTCAATGGAGATATGGATTCTGACCACAGTCCTAGACTTGTGTCTCCTCTGCCAGATCCAGAAGTTCCAATAGAGAGAATCTTTGTTGGTCCGAAGCAAAGCTCGAAGAATTCCTCGGAAACTCCTAGTCTTCGGTCTGAATCCAGTTGGAATAGCCAGAGTTTGTTGCTTCAGAGCAAATATGTAGAGAAGAAGAAGAACATCAAGAAAAACTCTAGTTGCAACAGTTACTTTCAGGAGAAGGATATGAGTAGCAATCACAAGGTGAGTAATAAGAAGAGTTTTCTCGCTACTCTTGGCTGCAGATGCGTGTGTTCGAACTGGAGTTCAGTGGATGTCGTCGACGACAAGAGAAGAAGCTCTGGTCTGAAGAAGATCAAGACTCAATTGAGTTTCTCTGGAGATCTAAGCTCGGAGATGAAGATTCATCAACAACAACAAGAAGCAATGCTAGAGCAGAGGAAGTCTCTGGAAATATTTGGATCTCCTCTTATTGAGAAGAGAATCATTCAGAAGAAATTTCCATGGGAATACTCGAGCTCTGCGAAAAAAGAAGAACATGGATTCTCTGTGAAGTATGAAGAAGAAGAAGATGGGAGTGTGAGCGATGTAAGTACGGATCTTTTTGAGATTGAGAGCTTAACAGGGAAGGCAAACCCTTTTCTTGCAAGGCAAGGAAGTAGTGATCCAGACTCACCAGATGGTTATGCACCAAGTGAGGTAAGCATACAATGGAGTGTAGTGACAGCAAGTGTAGCAGATTTCTCTGTTATGTCTGAATGTGCTACGAGTCCCGTCAAAAAGAACCGGTCTTTTCAGATTCCTCGAATCCCTATCATGGCAAAATCAAACCGAGAAATCGCGCCTCAGAGACGGAAATCTAGCAGTAGCGGTTTATTAATGGGATGCAAGAGTCATAAATCTGTCAGAGTTTCTGGTGATTCATACACAAGCATGAACAGAACACCGAGCTATGTTCCAAGATTCCCTGTAGAAGCTAATCCAACAAGCACTGAAACAAGAAGGAGGATCAGCAGTAGTTCTGTTTCTCACACGCAATCGCCTTTTTTGTATACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009638 GO:0009639 GO:0009958 GO:0009987 GO:0010017 GO:0010114 GO:0010218 GO:0016020 GO:0023052 GO:0032501 GO:0032502 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051606 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071944 GO:0099402 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

442

Amino Acids

49.13

Weight (kDa)

8.79

Isoelectric Point (pI)

67.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14280 AT2G02950
fragaria_vesca	FvH4_4g31450
malus_domestica	MD16G1073600.v1.1
prunus_persica	Prupe.1G273300_v2.0.a1
pyrus_communis	pycom13g06530
rosa_chinensis	RchiOBHm_Chr4g0439931
rosa_laevigata	RLG00000006224
rosa_multiflora	Rmu_sc0006000.1_g000001 Rmu_sc0022459.1_g000001
rosa_roxburghii	Rroxscaffold_5G00380880
rosa_rugosa	Rorug04G0322600
rosa_samantha	Rh4AG373500 Rh4BG385800 Rh4CG400300 Rh4DG380100
rosa_wichuraiana	Rw4G031940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	591, 1322
AccII	CGCG	1 cut(s)	1112
AciI	CCGC	1 cut(s)	1140
AclWI	GGATC	5 cut(s)	299, 739, 876, 929, 1286
AcsI	RAATTY	2 cut(s)	358, 767
AcuI	CTGAAG	3 cut(s)	231, 404, 638
AdeI	CACNNNGTG	2 cut(s)	514, 965
AfaI	GTAC	2 cut(s)	248, 865
AfiI	CCNNNNNNNGG	1 cut(s)	1087
AgeI	ACCGGT	1 cut(s)	1056
AgsI	TTSAA	2 cut(s)	27, 253
AluBI	AGCT	9 cut(s)	206, 239, 351, 609, 660, 789, 888, 1221, 1247
AluI	AGCT	9 cut(s)	206, 239, 351, 609, 660, 789, 888, 1221, 1247
Alw21I	GWGCWC	1 cut(s)	791
Alw26I	GTCTC	3 cut(s)	297, 720, 1114
AlwI	GGATC	5 cut(s)	299, 739, 876, 929, 1286
Ama87I	CYCGRG	1 cut(s)	784
ApeKI	GCWGC	1 cut(s)	549
ApoI	RAATTY	2 cut(s)	358, 767
AseI	ATTAAT	1 cut(s)	1148
AsiGI	ACCGGT	1 cut(s)	1056
Asp700I	GAANNNNTTC	1 cut(s)	248
AspLEI	GCGC	1 cut(s)	1114
AspS9I	GGNCC	2 cut(s)	89, 338
AsuHPI	GGTGA	6 cut(s)	16, 139, 166, 526, 936, 1199
AsuII	TTCGAA	1 cut(s)	566
AvaI	CYCGRG	1 cut(s)	784
AvaII	GGWCC	2 cut(s)	89, 338
BanII	GRGCYC	1 cut(s)	791
BbsI	GAAGAC	1 cut(s)	371
Bbv12I	GWGCWC	1 cut(s)	791
BbvI	GCAGC	1 cut(s)	536
BccI	CCATC	2 cut(s)	836, 944
BcoDI	GTCTC	3 cut(s)	297, 720, 1114
BfaI	CTAG	5 cut(s)	282, 375, 465, 701, 1131
BfmI	CTRYAG	2 cut(s)	550, 1239
BglII	AGATCT	1 cut(s)	652
BisI	GCNGC	1 cut(s)	550
BlsI	GCNGC	1 cut(s)	551
BmcAI	AGTACT	1 cut(s)	248
Bme18I	GGWCC	2 cut(s)	89, 338
BmeT110I	CYCGRG	1 cut(s)	784
BmgT120I	GGNCC	2 cut(s)	89, 338
BmsI	GCATC	3 cut(s)	130, 545, 1145
BoxI	GACNNNNGTC	2 cut(s)	276, 289
BpiI	GAAGAC	1 cut(s)	371
BplI	GAGNNNNNCTC	2 cut(s)	700, 732
BpmI	CTGGAG	2 cut(s)	592, 669
Bpu14I	TTCGAA	1 cut(s)	566
BsaJI	CCNNGG	2 cut(s)	363, 773
BsaWI	WCCGGW	1 cut(s)	1056
Bsc4I	CCNNNNNNNGG	1 cut(s)	1087
Bse118I	RCCGGY	1 cut(s)	1056
Bse1I	ACTGG	2 cut(s)	393, 575
Bse3DI	GCAATG	1 cut(s)	702
BseDI	CCNNGG	2 cut(s)	363, 773
BseGI	GGATG	2 cut(s)	589, 1160
BseLI	CCNNNNNNNGG	1 cut(s)	1087
BseMI	GCAATG	1 cut(s)	702
BseMII	CTCAG	2 cut(s)	231, 1130
BseNI	ACTGG	2 cut(s)	393, 575
BseRI	GAGGAG	2 cut(s)	285, 726
BseXI	GCAGC	1 cut(s)	536
Bsh1236I	CGCG	1 cut(s)	1112
BshTI	ACCGGT	1 cut(s)	1056
BsiHKAI	GWGCWC	1 cut(s)	791
BsiHKCI	CYCGRG	1 cut(s)	784
BsiSI	CCGG	1 cut(s)	1057
BslFI	GGGAC	1 cut(s)	1026
BslI	CCNNNNNNNGG	1 cut(s)	1087
BsmAI	GTCTC	3 cut(s)	297, 720, 1114
BsmBI	CGTCTC	1 cut(s)	1114
BsmFI	GGGAC	1 cut(s)	1026
BsoBI	CYCGRG	1 cut(s)	784
Bsp119I	TTCGAA	1 cut(s)	566
Bsp1286I	GDGCHC	1 cut(s)	791
Bsp143I	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
Bsp19I	CCATGG	1 cut(s)	773
BspACI	CCGC	1 cut(s)	1140
BspCNI	CTCAG	2 cut(s)	232, 1129
BspFNI	CGCG	1 cut(s)	1112
BspHI	TCATGA	1 cut(s)	51
BspMAI	CTGCAG	1 cut(s)	554
BspPI	GGATC	5 cut(s)	299, 739, 876, 929, 1286
BspT104I	TTCGAA	1 cut(s)	566
BsrDI	GCAATG	1 cut(s)	702
BsrFI	RCCGGY	1 cut(s)	1056
BsrI	ACTGG	2 cut(s)	393, 575
BssAI	RCCGGY	1 cut(s)	1056
BssECI	CCNNGG	2 cut(s)	363, 773
BssMI	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
BssNAI	GTATAC	1 cut(s)	1323
BssT1I	CCWWGG	1 cut(s)	773
Bst1107I	GTATAC	1 cut(s)	1323
Bst4CI	ACNGT	3 cut(s)	74, 278, 476
Bst6I	CTCTTC	3 cut(s)	103, 521, 743
BstBI	TTCGAA	1 cut(s)	566
BstDEI	CTNAG	3 cut(s)	240, 656, 1116
BstDSI	CCRYGG	1 cut(s)	773
BstEII	GGTNACC	1 cut(s)	4
BstF5I	GGATG	2 cut(s)	589, 1160
BstFNI	CGCG	1 cut(s)	1112
BstHHI	GCGC	1 cut(s)	1114
BstKTI	GATC	8 cut(s)	225, 307, 627, 655, 734, 871, 937, 1281
BstMAI	GTCTC	3 cut(s)	297, 720, 1114
BstMBI	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
BstMWI	GCNNNNNNNGC	2 cut(s)	555, 1004
BstPAI	GACNNNNGTC	2 cut(s)	276, 289
BstPI	GGTNACC	1 cut(s)	4
BstSFI	CTRYAG	2 cut(s)	550, 1239
BstUI	CGCG	1 cut(s)	1112
BstV1I	GCAGC	1 cut(s)	536
BstV2I	GAAGAC	1 cut(s)	371
BstX2I	RGATCY	4 cut(s)	304, 652, 731, 868
BstYI	RGATCY	4 cut(s)	304, 652, 731, 868
BstZ17I	GTATAC	1 cut(s)	1323
BtgI	CCRYGG	1 cut(s)	773
BtgZI	GCGATG	1 cut(s)	870
BtsCI	GGATG	2 cut(s)	589, 1160
BtsIMutI	CAGTG	3 cut(s)	232, 585, 1260
CciI	TCATGA	1 cut(s)	51
CfoI	GCGC	1 cut(s)	1114
Cfr10I	RCCGGY	1 cut(s)	1056
Cfr13I	GGNCC	2 cut(s)	89, 338
Csp6I	GTAC	2 cut(s)	247, 864
CspAI	ACCGGT	1 cut(s)	1056
CviAII	CATG	5 cut(s)	52, 774, 809, 1087, 1204
CviQI	GTAC	2 cut(s)	247, 864
DdeI	CTNAG	3 cut(s)	240, 656, 1116
DpnI	GATC	8 cut(s)	224, 306, 626, 654, 733, 870, 936, 1280
DpnII	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
DraIII	CACNNNGTG	2 cut(s)	514, 965
Eam1104I	CTCTTC	3 cut(s)	103, 521, 743
EarI	CTCTTC	3 cut(s)	103, 521, 743
Ecl136II	GAGCTC	1 cut(s)	789
Eco130I	CCWWGG	1 cut(s)	773
Eco24I	GRGCYC	1 cut(s)	791
Eco47I	GGWCC	2 cut(s)	89, 338
Eco53kI	GAGCTC	1 cut(s)	789
Eco57I	CTGAAG	3 cut(s)	231, 404, 638
Eco88I	CYCGRG	1 cut(s)	784
Eco91I	GGTNACC	1 cut(s)	4
EcoICRI	GAGCTC	1 cut(s)	789
EcoO65I	GGTNACC	1 cut(s)	4
EcoRI	GAATTC	1 cut(s)	358
EcoT14I	CCWWGG	1 cut(s)	773
EcoT38I	GRGCYC	1 cut(s)	791
ErhI	CCWWGG	1 cut(s)	773
Esp3I	CGTCTC	1 cut(s)	1114
FaeI	CATG	5 cut(s)	55, 777, 812, 1090, 1207
FaqI	GGGAC	1 cut(s)	1026
FatI	CATG	5 cut(s)	51, 773, 808, 1086, 1203
FblI	GTMKAC	2 cut(s)	591, 1322
Fnu4HI	GCNGC	1 cut(s)	550
FokI	GGATG	2 cut(s)	596, 1167
FriOI	GRGCYC	1 cut(s)	791
Fsp4HI	GCNGC	1 cut(s)	550
FspBI	CTAG	5 cut(s)	282, 375, 465, 701, 1131
GlaI	GCGC	1 cut(s)	1113
GluI	GCNGC	1 cut(s)	550
GsuI	CTGGAG	2 cut(s)	592, 669
HapII	CCGG	1 cut(s)	1057
HhaI	GCGC	1 cut(s)	1114
Hin1II	CATG	5 cut(s)	55, 777, 812, 1090, 1207
Hin6I	GCGC	1 cut(s)	1112
HinP1I	GCGC	1 cut(s)	1112
HincII	GTYRAC	1 cut(s)	592
HindII	GTYRAC	1 cut(s)	592
HindIII	AAGCTT	1 cut(s)	204
HpaII	CCGG	1 cut(s)	1057
HphI	GGTGA	6 cut(s)	16, 139, 166, 526, 936, 1199
Hpy166II	GTNNAC	2 cut(s)	592, 1323
Hpy188III	TCNNGA	8 cut(s)	52, 308, 454, 485, 628, 648, 719, 938
Hpy8I	GTNNAC	2 cut(s)	592, 1323
Hpy99I	CGWCG	2 cut(s)	593, 596
HpyAV	CCTTC	3 cut(s)	484, 892, 1266
HpyCH4III	ACNGT	3 cut(s)	74, 278, 476
HpyCH4IV	ACGT	1 cut(s)	36
HpyCH4V	TGCA	5 cut(s)	471, 552, 917, 959, 1158
HpyF10VI	GCNNNNNNNGC	2 cut(s)	555, 1004
HpyF3I	CTNAG	3 cut(s)	240, 656, 1116
HpySE526I	ACGT	1 cut(s)	36
Hsp92II	CATG	5 cut(s)	55, 777, 812, 1090, 1207
HspAI	GCGC	1 cut(s)	1112
Kzo9I	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
LmnI	GCTCC	1 cut(s)	236
Lsp1109I	GCAGC	1 cut(s)	536
LweI	GCATC	3 cut(s)	130, 545, 1145
MaeI	CTAG	5 cut(s)	282, 375, 465, 701, 1131
MaeII	ACGT	1 cut(s)	36
MaeIII	GTNAC	4 cut(s)	4, 74, 476, 991
MalI	GATC	8 cut(s)	224, 306, 626, 654, 733, 870, 936, 1280
MboI	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
MfeI	CAATTG	1 cut(s)	635
MflI	RGATCY	4 cut(s)	304, 652, 731, 868
MhlI	GDGCHC	1 cut(s)	791
MluCI	AATT	4 cut(s)	192, 358, 635, 767
MlyI	GAGTC	4 cut(s)	625, 935, 1048, 1171
MmeI	TCCRAC	2 cut(s)	377, 1277
MnlI	CCTC	8 cut(s)	306, 373, 702, 747, 961, 1083, 1125, 1269
MroXI	GAANNNNTTC	1 cut(s)	248
MseI	TTAA	5 cut(s)	11, 195, 890, 1148, 1327
MslI	CAYNNNNRTG	1 cut(s)	1202
MspI	CCGG	1 cut(s)	1057
MunI	CAATTG	1 cut(s)	635
MvnI	CGCG	1 cut(s)	1112
MwoI	GCNNNNNNNGC	2 cut(s)	555, 1004
NcoI	CCATGG	1 cut(s)	773
NdeII	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
NlaIII	CATG	5 cut(s)	55, 777, 812, 1090, 1207
NmuCI	GTSAC	2 cut(s)	4, 991
NspV	TTCGAA	1 cut(s)	566
PaeR7I	CTCGAG	1 cut(s)	784
PagI	TCATGA	1 cut(s)	51
PcsI	WCGNNNNNNNCGW	1 cut(s)	791
PdmI	GAANNNNTTC	1 cut(s)	248
PinAI	ACCGGT	1 cut(s)	1056
PkrI	GCNGC	1 cut(s)	551
PleI	GAGTC	4 cut(s)	625, 935, 1047, 1170
PpsI	GAGTC	4 cut(s)	625, 935, 1047, 1170
PshAI	GACNNNNGTC	2 cut(s)	276, 289
PshBI	ATTAAT	1 cut(s)	1148
Psp124BI	GAGCTC	1 cut(s)	791
PspEI	GGTNACC	1 cut(s)	4
PspPI	GGNCC	2 cut(s)	89, 338
PspXI	VCTCGAGB	1 cut(s)	784
PstI	CTGCAG	1 cut(s)	554
PsuI	RGATCY	4 cut(s)	304, 652, 731, 868
RsaI	GTAC	2 cut(s)	248, 865
RsaNI	GTAC	2 cut(s)	247, 864
RseI	CAYNNNNRTG	1 cut(s)	1202
SacI	GAGCTC	1 cut(s)	791
SalI	GTCGAC	1 cut(s)	590
SaqAI	TTAA	5 cut(s)	11, 195, 890, 1148, 1327
SatI	GCNGC	1 cut(s)	550
Sau3AI	GATC	8 cut(s)	222, 304, 624, 652, 731, 868, 934, 1278
Sau96I	GGNCC	2 cut(s)	89, 338
ScaI	AGTACT	1 cut(s)	248
SchI	GAGTC	4 cut(s)	625, 935, 1048, 1171
SduI	GDGCHC	1 cut(s)	791
SfaNI	GCATC	3 cut(s)	130, 545, 1145
SfcI	CTRYAG	2 cut(s)	550, 1239
Sfr274I	CTCGAG	1 cut(s)	784
SfuI	TTCGAA	1 cut(s)	566
SgrDI	CGTCGACG	1 cut(s)	590
SinI	GGWCC	2 cut(s)	89, 338
SlaI	CTCGAG	1 cut(s)	784
SmiMI	CAYNNNNRTG	1 cut(s)	1202
SmlI	CTYRAG	1 cut(s)	784
SmoI	CTYRAG	1 cut(s)	784
Sse9I	AATT	4 cut(s)	192, 358, 635, 767
SsiI	CCGC	1 cut(s)	1140
SspI	AATATT	1 cut(s)	726
SspMI	CTAG	5 cut(s)	282, 375, 465, 701, 1131
SstI	GAGCTC	1 cut(s)	791
StyI	CCWWGG	1 cut(s)	773
TaaI	ACNGT	3 cut(s)	74, 278, 476
TaiI	ACGT	1 cut(s)	39
TaqI	TCGA	5 cut(s)	353, 566, 591, 785, 1075
TaqII	GACCGA	1 cut(s)	372
TasI	AATT	4 cut(s)	192, 358, 635, 767
TatI	WGTACW	1 cut(s)	246
Tru1I	TTAA	5 cut(s)	11, 195, 890, 1148, 1327
Tru9I	TTAA	5 cut(s)	11, 195, 890, 1148, 1327
TscAI	CASTG	3 cut(s)	232, 585, 1267
TseFI	GTSAC	2 cut(s)	4, 991
TseI	GCWGC	1 cut(s)	549
Tsp45I	GTSAC	2 cut(s)	4, 991
TspDTI	ATGAA	8 cut(s)	6, 40, 71, 665, 683, 843, 1182, 1220
TspGWI	ACGGA	2 cut(s)	881, 1138
TspRI	CASTG	3 cut(s)	232, 585, 1267
VpaK11BI	GGWCC	2 cut(s)	89, 338
VspI	ATTAAT	1 cut(s)	1148
XapI	RAATTY	2 cut(s)	358, 767
XhoI	CTCGAG	1 cut(s)	784
XmiI	GTMKAC	2 cut(s)	591, 1322
XmnI	GAANNNNTTC	1 cut(s)	248
XspI	CTAG	5 cut(s)	282, 375, 465, 701, 1131
ZrmI	AGTACT	1 cut(s)	248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.