AT1G15700

ATP synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0015013
Physical Location & Seq
Reverse (-)
5402569 .. 5403818
1250 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15700.1

Sequence Viewer

Length: 1161 bp
ATGACAGGTTCGATCTCGACCTCTTGGCTCTTGTCGTCTCCTTCGAATTCGAATTCGGCTTCGAGCTCAGAGTCCTACTCTTTCATAGCTACCTTGAAACCAGTTCGTTATTATCCGTTTCAATCACTGACACCAAACCGGATTTCGTCGAGATCTCCGTTGCCCTCAATTCAAATTCGAGCTGGAATCCGAGAGTTACGAGAACGAATCGACAGTGTGAAGAATACCCAGAAGATAACGGAAGCGATGAGACTCGTGGCGGCAGCTAGAGTTCGTCGAGCTCAAGATGCAGTCATAAAGGGTAGACCTTTCACTGAAACTCTTGTGGAGATTCTCTACTCAATTAACCAATCTGCTCAATTAGAAGACATTGATTTTCCTCTGAGCATTGTTAGACCCGTGAAGAGAGTTGCTTTGGTTGTTGTTACTGGCGATAAAGGATTGTGTGGTGGTTTCAACAATGCAGTGACCAAGAAAGCTACTCTGCGAGTTCAAGAGTTGAAGCAGAGAGGAATAGACTGTGTTGTGATAAGTGTAGGTAAGAAAGGGAATGCTTATTTTAGTCGGAGAGATGAATTTGATGTTGATAAATGTATTGAAGGAGGAGGTGTTTTCCCAACGACTAAAGAAGCTCAAGTTATTGCAGATGATGTGTTTTCCTTGTTTGTCAGTGAAGAGGTTGATAAAGTTGAGCTTGTTTACACAAAGTTTGTGTCTTTGGTGAAATCTGATCCTGTGATCCACACTCTGTTGCCTTTGTCGATGAAAGGAGAGTCTTGTGATGTGAAAGGTGAGTGTGTTGATGCTATCGAGGATGAGATGTTTAGGCTAACGAGCAAAGATGGGAAGTTAGCTGTGGAAAGGACCAAGCTTGAAGTTGAGAAGCCTGAGATCTCACCGTTGATGCAGTTTGAGCAAGACCCTGTTCAGATTCTTGATGCAATGATGCCTTTGTATCTCAACAGTCAGATTCTAAGAGCACTGCAGGAATCTTTAGCGAGTGAGCTTGCGTCGAGGATGAATGCGATGAGTAATGCGACTGATAATGCGGTTGAATTGAAGAAGAATCTGACGATGGCTTATAACCGAGCGAGACAGGCTAAGATCACTGGGGAGTTGCTGGAGATTGTGGCTGGAGCAGAAGCTCTTCGAGAGTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009544 GO:0009579 GO:0009767 GO:0009772 GO:0009941 GO:0009987 GO:0015672 GO:0015979 GO:0015985 GO:0015986 GO:0016020 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019684 GO:0019693 GO:0022603 GO:0022900 GO:0030234 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0034220 GO:0034357 GO:0034641 GO:0034654 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046034 GO:0046390 GO:0046483 GO:0050789 GO:0050790 GO:0050793 GO:0051179 GO:0051234 GO:0051239 GO:0055035 GO:0055085 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0098655 GO:0098660 GO:0098662 GO:0098772 GO:0098796 GO:0098807 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600 GO:1905421 GO:2000026 GO:2000067 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko00190 ko00195 ko01100 map00190 map00195 map01100
Pfam Domains
Protein Families
ATP-synt

Protein Analysis

386

Amino Acids

42.68

Weight (kDa)

6.7

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt PF00231 63 - 383 1.3e-91 ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015013)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15700
fragaria_vesca FvH4_3g22880
malus_domestica MD06G1240800.v1.1 MD11G1216600.v1.1
prunus_persica Prupe.4G214800_v2.0.a1
pyrus_communis pycom06g21580 pycom11g19070
rosa_chinensis RchiOBHm_Chr5g0040181
rosa_laevigata RLG00000033963
rosa_roxburghii Rroxscaffold_1G00041100
rosa_rugosa Rorug05G0183900
rosa_samantha Rh5BG274100 Rh5CG307000 Rh5DG282300
rosa_wichuraiana Rw5G025290 Rw5G025310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1083
AccI GTMKAC 1 cut(s) 304
AciI CCGC 2 cut(s) 260, 1049
AclWI GGATC 2 cut(s) 725, 733
AcsI RAATTY 4 cut(s) 46, 52, 174, 575
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
Alw21I GWGCWC 3 cut(s) 68, 283, 982
Alw26I GTCTC 3 cut(s) 42, 244, 1087
AlwI GGATC 2 cut(s) 725, 733
ApeKI GCWGC 1 cut(s) 263
ApoI RAATTY 4 cut(s) 46, 52, 174, 575
ArsI GACNNNNNNTTYG 2 cut(s) 698, 730
Asp700I GAANNNNTTC 1 cut(s) 1146
AspS9I GGNCC 1 cut(s) 864
AsuHPI GGTGA 3 cut(s) 733, 803, 888
AsuII TTCGAA 2 cut(s) 44, 50
AvaII GGWCC 1 cut(s) 864
BanII GRGCYC 2 cut(s) 68, 283
BauI CACGAG 1 cut(s) 254
BbsI GAAGAC 1 cut(s) 372
Bbv12I GWGCWC 3 cut(s) 68, 283, 982
BbvI GCAGC 1 cut(s) 275
BccI CCATC 2 cut(s) 836, 1069
BcoDI GTCTC 3 cut(s) 42, 244, 1087
BfaI CTAG 1 cut(s) 267
BfmI CTRYAG 1 cut(s) 983
BglII AGATCT 2 cut(s) 152, 891
BisI GCNGC 2 cut(s) 261, 264
BlsI GCNGC 2 cut(s) 262, 265
Bme18I GGWCC 1 cut(s) 864
BmgT120I GGNCC 1 cut(s) 864
BmrI ACTGGG 1 cut(s) 1119
BmsI GCATC 5 cut(s) 277, 793, 894, 928, 936
BmuI ACTGGG 1 cut(s) 1119
BpiI GAAGAC 1 cut(s) 372
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 2 cut(s) 1142, 1155
Bpu14I TTCGAA 2 cut(s) 44, 50
BpuEI CTTGAG 2 cut(s) 267, 618
BsaWI WCCGGW 1 cut(s) 138
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bse1I ACTGG 3 cut(s) 101, 433, 1114
Bse3DI GCAATG 1 cut(s) 948
BseGI GGATG 2 cut(s) 820, 1023
BseMI GCAATG 1 cut(s) 948
BseMII CTCAG 3 cut(s) 81, 374, 879
BseNI ACTGG 3 cut(s) 101, 433, 1114
BseRI GAGGAG 1 cut(s) 618
BseXI GCAGC 1 cut(s) 275
BsiHKAI GWGCWC 3 cut(s) 68, 283, 982
BsiSI CCGG 1 cut(s) 139
BsmAI GTCTC 3 cut(s) 42, 244, 1087
BsmBI CGTCTC 1 cut(s) 42
BsmI GAATGC 2 cut(s) 556, 1027
Bsp119I TTCGAA 2 cut(s) 44, 50
Bsp1286I GDGCHC 3 cut(s) 68, 283, 982
Bsp143I GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
BspACI CCGC 2 cut(s) 260, 1049
BspCNI CTCAG 3 cut(s) 80, 375, 880
BspMAI CTGCAG 1 cut(s) 987
BspPI GGATC 2 cut(s) 725, 733
BspQI GCTCTTC 1 cut(s) 1152
BspT104I TTCGAA 2 cut(s) 44, 50
BsrDI GCAATG 1 cut(s) 948
BsrI ACTGG 3 cut(s) 101, 433, 1114
BssMI GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
BssSI CACGAG 1 cut(s) 254
Bst2BI CACGAG 1 cut(s) 254
Bst4CI ACNGT 4 cut(s) 215, 521, 900, 965
Bst6I CTCTTC 3 cut(s) 398, 669, 1152
BstBI TTCGAA 2 cut(s) 44, 50
BstC8I GCNNGC 1 cut(s) 1008
BstDEI CTNAG 6 cut(s) 67, 383, 888, 974, 1101, 1158
BstF5I GGATG 2 cut(s) 820, 1023
BstKTI GATC 6 cut(s) 15, 155, 733, 741, 894, 1107
BstMAI GTCTC 3 cut(s) 42, 244, 1087
BstMBI GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
BstMWI GCNNNNNNNGC 3 cut(s) 287, 913, 1097
BstSFI CTRYAG 1 cut(s) 983
BstV1I GCAGC 1 cut(s) 275
BstV2I GAAGAC 1 cut(s) 372
BstX2I RGATCY 2 cut(s) 152, 891
BstYI RGATCY 2 cut(s) 152, 891
BtgZI GCGATG 2 cut(s) 260, 1040
BtsCI GGATG 2 cut(s) 820, 1023
BtsI GCAGTG 2 cut(s) 471, 980
BtsIMutI CAGTG 7 cut(s) 125, 220, 312, 471, 676, 980, 1107
Cac8I GCNNGC 1 cut(s) 1008
Cfr13I GGNCC 1 cut(s) 864
CseI GACGC 1 cut(s) 999
DdeI CTNAG 6 cut(s) 67, 383, 888, 974, 1101, 1158
DpnI GATC 6 cut(s) 14, 154, 732, 740, 893, 1106
DpnII GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
Eam1104I CTCTTC 3 cut(s) 398, 669, 1152
EarI CTCTTC 3 cut(s) 398, 669, 1152
Ecl136II GAGCTC 2 cut(s) 66, 281
Eco24I GRGCYC 2 cut(s) 68, 283
Eco47I GGWCC 1 cut(s) 864
Eco53kI GAGCTC 2 cut(s) 66, 281
EcoICRI GAGCTC 2 cut(s) 66, 281
EcoRI GAATTC 2 cut(s) 46, 52
EcoT38I GRGCYC 2 cut(s) 68, 283
Esp3I CGTCTC 1 cut(s) 42
FaiI YATR 3 cut(s) 86, 296, 1083
FalI AAGNNNNNCTT 2 cut(s) 678, 710
FblI GTMKAC 1 cut(s) 304
Fnu4HI GCNGC 2 cut(s) 261, 264
FokI GGATG 2 cut(s) 827, 1030
FriOI GRGCYC 2 cut(s) 68, 283
Fsp4HI GCNGC 2 cut(s) 261, 264
FspBI CTAG 1 cut(s) 267
GluI GCNGC 2 cut(s) 261, 264
GsuI CTGGAG 2 cut(s) 1142, 1155
HapII CCGG 1 cut(s) 139
HgaI GACGC 1 cut(s) 999
HindIII AAGCTT 1 cut(s) 869
HpaII CCGG 1 cut(s) 139
HphI GGTGA 3 cut(s) 733, 803, 888
Hpy166II GTNNAC 2 cut(s) 305, 700
Hpy188I TCNGA 8 cut(s) 70, 191, 384, 567, 730, 930, 969, 1071
Hpy188III TCNNGA 6 cut(s) 16, 150, 284, 494, 935, 1151
Hpy8I GTNNAC 2 cut(s) 305, 700
Hpy99I CGWCG 3 cut(s) 151, 279, 1015
HpyAV CCTTC 2 cut(s) 51, 593
HpyCH4III ACNGT 4 cut(s) 215, 521, 900, 965
HpyCH4V TGCA 6 cut(s) 290, 464, 644, 907, 941, 985
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 913, 1097
HpyF3I CTNAG 6 cut(s) 67, 383, 888, 974, 1101, 1158
Kzo9I GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
LguI GCTCTTC 1 cut(s) 1152
LmnI GCTCC 1 cut(s) 1136
Lsp1109I GCAGC 1 cut(s) 275
LweI GCATC 5 cut(s) 277, 793, 894, 928, 936
MaeI CTAG 1 cut(s) 267
MaeIII GTNAC 3 cut(s) 195, 424, 466
MalI GATC 6 cut(s) 14, 154, 732, 740, 893, 1106
MboI GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
MboII GAAGA 8 cut(s) 232, 244, 377, 415, 686, 1072, 1075, 1139
MflI RGATCY 2 cut(s) 152, 891
MhlI GDGCHC 3 cut(s) 68, 283, 982
MluCI AATT 8 cut(s) 46, 52, 168, 174, 342, 359, 575, 1055
MlyI GAGTC 3 cut(s) 80, 246, 782
MmeI TCCRAC 1 cut(s) 545
MnlI CCTC 9 cut(s) 31, 175, 390, 503, 596, 599, 670, 805, 1008
MroXI GAANNNNTTC 1 cut(s) 1146
MseI TTAA 1 cut(s) 345
MspI CCGG 1 cut(s) 139
Mva1269I GAATGC 2 cut(s) 556, 1027
MwoI GCNNNNNNNGC 3 cut(s) 287, 913, 1097
NdeII GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
NmuCI GTSAC 1 cut(s) 466
NspV TTCGAA 2 cut(s) 44, 50
PciSI GCTCTTC 1 cut(s) 1152
PcsI WCGNNNNNNNCGW 2 cut(s) 41, 155
PctI GAATGC 2 cut(s) 556, 1027
PdmI GAANNNNTTC 1 cut(s) 1146
PfeI GAWTC 7 cut(s) 186, 207, 331, 931, 970, 989, 1066
PkrI GCNGC 2 cut(s) 262, 265
PleI GAGTC 3 cut(s) 79, 246, 781
PpsI GAGTC 3 cut(s) 79, 246, 781
PsiI TTATAA 1 cut(s) 1083
Psp124BI GAGCTC 2 cut(s) 68, 283
PspPI GGNCC 1 cut(s) 864
PstI CTGCAG 1 cut(s) 987
PsuI RGATCY 2 cut(s) 152, 891
SacI GAGCTC 2 cut(s) 68, 283
SapI GCTCTTC 1 cut(s) 1152
SaqAI TTAA 1 cut(s) 345
SatI GCNGC 2 cut(s) 261, 264
Sau3AI GATC 6 cut(s) 12, 152, 730, 738, 891, 1104
Sau96I GGNCC 1 cut(s) 864
SchI GAGTC 3 cut(s) 80, 246, 782
SduI GDGCHC 3 cut(s) 68, 283, 982
SfaNI GCATC 5 cut(s) 277, 793, 894, 928, 936
SfcI CTRYAG 1 cut(s) 983
SfuI TTCGAA 2 cut(s) 44, 50
SinI GGWCC 1 cut(s) 864
SmlI CTYRAG 2 cut(s) 282, 633
SmoI CTYRAG 2 cut(s) 282, 633
Sse9I AATT 8 cut(s) 46, 52, 168, 174, 342, 359, 575, 1055
SsiI CCGC 2 cut(s) 260, 1049
SspMI CTAG 1 cut(s) 267
SstI GAGCTC 2 cut(s) 68, 283
TaaI ACNGT 4 cut(s) 215, 521, 900, 965
TasI AATT 8 cut(s) 46, 52, 168, 174, 342, 359, 575, 1055
TauI GCSGC 1 cut(s) 263
TfiI GAWTC 7 cut(s) 186, 207, 331, 931, 970, 989, 1066
Tru1I TTAA 1 cut(s) 345
Tru9I TTAA 1 cut(s) 345
TscAI CASTG 7 cut(s) 132, 220, 319, 471, 676, 987, 1114
TseFI GTSAC 1 cut(s) 466
TseI GCWGC 1 cut(s) 263
Tsp45I GTSAC 1 cut(s) 466
TspDTI ATGAA 4 cut(s) 73, 588, 779, 1034
TspGWI ACGGA 3 cut(s) 105, 147, 254
TspRI CASTG 7 cut(s) 132, 220, 319, 471, 676, 987, 1114
VpaK11BI GGWCC 1 cut(s) 864
XapI RAATTY 4 cut(s) 46, 52, 174, 575
XmiI GTMKAC 1 cut(s) 304
XmnI GAANNNNTTC 1 cut(s) 1146
XspI CTAG 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.