Photosynthetic NDH subunit of subcomplex B 1, chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15980 |
| fragaria_vesca | FvH4_6g28640 FvH4_6g28640 FvH4_6g28640 |
| malus_domestica | MD17G1223300.v1.1 |
| prunus_persica | Prupe.3G098200_v2.0.a1 |
| pyrus_communis | pycom17g22730 |
| rosa_chinensis | RchiOBHm_Chr2g0132981 |
| rosa_laevigata | RLG00000019301 |
| rosa_multiflora | Rmu_sc0007314.1_g000011 Rmu_sc0019447.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00111580 |
| rosa_rugosa | Rorug02G0309100 |
| rosa_samantha | Rh2AG361300 Rh2BG367100 Rh2CG344600 Rh2DG384100 |
| rosa_wichuraiana | Rw2G029380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1013 |
| Acc36I | ACCTGC | 1 cut(s) | 1345 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1220 |
| AccI | GTMKAC | 1 cut(s) | 770 |
| AccII | CGCG | 1 cut(s) | 1204 |
| AccIII | TCCGGA | 1 cut(s) | 520 |
| AciI | CCGC | 2 cut(s) | 56, 180 |
| AclI | AACGTT | 1 cut(s) | 1074 |
| AclWI | GGATC | 4 cut(s) | 233, 246, 512, 1375 |
| AcuI | CTGAAG | 1 cut(s) | 1218 |
| AfaI | GTAC | 2 cut(s) | 584, 1260 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1220 |
| AgsI | TTSAA | 9 cut(s) | 98, 283, 328, 935, 995, 1033, 1079, 1190, 1364 |
| AjnI | CCWGG | 2 cut(s) | 430, 1123 |
| AluBI | AGCT | 9 cut(s) | 310, 412, 484, 545, 610, 701, 1181, 1196, 1252 |
| AluI | AGCT | 9 cut(s) | 310, 412, 484, 545, 610, 701, 1181, 1196, 1252 |
| Alw26I | GTCTC | 3 cut(s) | 651, 713, 1200 |
| AlwI | GGATC | 4 cut(s) | 233, 246, 512, 1375 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 701 |
| Ama87I | CYCGRG | 1 cut(s) | 654 |
| Aor13HI | TCCGGA | 1 cut(s) | 520 |
| AoxI | GGCC | 3 cut(s) | 504, 533, 622 |
| ApeKI | GCWGC | 5 cut(s) | 357, 629, 875, 1136, 1181 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 66, 98 |
| AspLEI | GCGC | 1 cut(s) | 1204 |
| AspS9I | GGNCC | 2 cut(s) | 207, 504 |
| AsuC2I | CCSGG | 1 cut(s) | 191 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 1103 |
| AsuII | TTCGAA | 1 cut(s) | 1301 |
| AsuNHI | GCTAGC | 1 cut(s) | 610 |
| AvaI | CYCGRG | 1 cut(s) | 654 |
| AvaII | GGWCC | 1 cut(s) | 207 |
| BamHI | GGATCC | 1 cut(s) | 238 |
| BauI | CACGAG | 1 cut(s) | 1379 |
| BbsI | GAAGAC | 4 cut(s) | 76, 192, 802, 1310 |
| BbvI | GCAGC | 5 cut(s) | 344, 641, 862, 1123, 1168 |
| BccI | CCATC | 2 cut(s) | 495, 772 |
| BceAI | ACGGC | 3 cut(s) | 43, 289, 666 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 339, 373 |
| BciT130I | CCWGG | 2 cut(s) | 432, 1125 |
| BciVI | GTATCC | 1 cut(s) | 438 |
| BclI | TGATCA | 1 cut(s) | 526 |
| BcnI | CCSGG | 1 cut(s) | 191 |
| BcoDI | GTCTC | 3 cut(s) | 651, 713, 1200 |
| BfaI | CTAG | 3 cut(s) | 611, 1193, 1316 |
| BfmI | CTRYAG | 2 cut(s) | 693, 1104 |
| BfuAI | ACCTGC | 1 cut(s) | 1345 |
| BfuI | GTATCC | 1 cut(s) | 438 |
| BglII | AGATCT | 1 cut(s) | 116 |
| BisI | GCNGC | 6 cut(s) | 56, 358, 630, 876, 1137, 1182 |
| BlsI | GCNGC | 6 cut(s) | 57, 359, 631, 877, 1138, 1183 |
| Bme1390I | CCNGG | 3 cut(s) | 191, 432, 1125 |
| Bme18I | GGWCC | 1 cut(s) | 207 |
| BmeT110I | CYCGRG | 1 cut(s) | 654 |
| BmgT120I | GGNCC | 2 cut(s) | 207, 504 |
| BmiI | GGNNCC | 2 cut(s) | 208, 240 |
| BmrFI | CCNGG | 3 cut(s) | 191, 432, 1125 |
| BmsI | GCATC | 3 cut(s) | 699, 959, 961 |
| BmtI | GCTAGC | 1 cut(s) | 614 |
| BpiI | GAAGAC | 4 cut(s) | 76, 192, 802, 1310 |
| BpmI | CTGGAG | 2 cut(s) | 915, 1179 |
| Bpu14I | TTCGAA | 1 cut(s) | 1301 |
| BpuEI | CTTGAG | 1 cut(s) | 125 |
| BpuMI | CCSGG | 1 cut(s) | 191 |
| Bsa29I | ATCGAT | 1 cut(s) | 845 |
| BsaI | GGTCTC | 1 cut(s) | 713 |
| BsaJI | CCNNGG | 2 cut(s) | 158, 815 |
| BsaWI | WCCGGW | 3 cut(s) | 250, 368, 520 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1220 |
| Bse118I | RCCGGY | 1 cut(s) | 1036 |
| Bse1I | ACTGG | 1 cut(s) | 1312 |
| Bse3DI | GCAATG | 1 cut(s) | 1356 |
| BseAI | TCCGGA | 1 cut(s) | 520 |
| BseBI | CCWGG | 2 cut(s) | 432, 1125 |
| BseCI | ATCGAT | 1 cut(s) | 845 |
| BseDI | CCNNGG | 2 cut(s) | 158, 815 |
| BseGI | GGATG | 1 cut(s) | 529 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1220 |
| BseMI | GCAATG | 1 cut(s) | 1356 |
| BseMII | CTCAG | 1 cut(s) | 788 |
| BseNI | ACTGG | 1 cut(s) | 1312 |
| BseRI | GAGGAG | 3 cut(s) | 351, 560, 813 |
| BseXI | GCAGC | 5 cut(s) | 344, 641, 862, 1123, 1168 |
| Bsh1236I | CGCG | 1 cut(s) | 1204 |
| BshFI | GGCC | 3 cut(s) | 506, 535, 624 |
| BshVI | ATCGAT | 1 cut(s) | 845 |
| BsiHKCI | CYCGRG | 1 cut(s) | 654 |
| BsiSI | CCGG | 5 cut(s) | 191, 251, 369, 521, 1037 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1220 |
| BsmAI | GTCTC | 3 cut(s) | 651, 713, 1200 |
| BsmI | GAATGC | 1 cut(s) | 895 |
| BsnI | GGCC | 3 cut(s) | 506, 535, 624 |
| Bso31I | GGTCTC | 1 cut(s) | 713 |
| BsoBI | CYCGRG | 1 cut(s) | 654 |
| Bsp119I | TTCGAA | 1 cut(s) | 1301 |
| Bsp13I | TCCGGA | 1 cut(s) | 520 |
| Bsp143I | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| BspACI | CCGC | 2 cut(s) | 56, 180 |
| BspANI | GGCC | 3 cut(s) | 506, 535, 624 |
| BspCNI | CTCAG | 1 cut(s) | 787 |
| BspDI | ATCGAT | 1 cut(s) | 845 |
| BspEI | TCCGGA | 1 cut(s) | 520 |
| BspFNI | CGCG | 1 cut(s) | 1204 |
| BspHI | TCATGA | 1 cut(s) | 642 |
| BspLI | GGNNCC | 2 cut(s) | 208, 240 |
| BspMAI | CTGCAG | 1 cut(s) | 697 |
| BspMI | ACCTGC | 1 cut(s) | 1345 |
| BspOI | GCTAGC | 1 cut(s) | 614 |
| BspPI | GGATC | 4 cut(s) | 233, 246, 512, 1375 |
| BspT104I | TTCGAA | 1 cut(s) | 1301 |
| BspTNI | GGTCTC | 1 cut(s) | 713 |
| BsrDI | GCAATG | 1 cut(s) | 1356 |
| BsrFI | RCCGGY | 1 cut(s) | 1036 |
| BsrI | ACTGG | 1 cut(s) | 1312 |
| BssAI | RCCGGY | 1 cut(s) | 1036 |
| BssECI | CCNNGG | 2 cut(s) | 158, 815 |
| BssMI | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| BssNAI | GTATAC | 1 cut(s) | 771 |
| BssSI | CACGAG | 1 cut(s) | 1379 |
| BssT1I | CCWWGG | 1 cut(s) | 815 |
| Bst1107I | GTATAC | 1 cut(s) | 771 |
| Bst2BI | CACGAG | 1 cut(s) | 1379 |
| Bst2UI | CCWGG | 2 cut(s) | 432, 1125 |
| Bst4CI | ACNGT | 7 cut(s) | 304, 324, 801, 1131, 1263, 1286, 1339 |
| Bst6I | CTCTTC | 4 cut(s) | 1233, 1237, 1266, 1271 |
| BstBI | TTCGAA | 1 cut(s) | 1301 |
| BstC8I | GCNNGC | 2 cut(s) | 312, 612 |
| BstDEI | CTNAG | 4 cut(s) | 774, 836, 945, 1005 |
| BstDSI | CCRYGG | 1 cut(s) | 158 |
| BstF5I | GGATG | 1 cut(s) | 529 |
| BstFNI | CGCG | 1 cut(s) | 1204 |
| BstHHI | GCGC | 1 cut(s) | 1204 |
| BstKTI | GATC | 6 cut(s) | 119, 241, 520, 529, 564, 1370 |
| BstMAI | GTCTC | 3 cut(s) | 651, 713, 1200 |
| BstMBI | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| BstNI | CCWGG | 2 cut(s) | 432, 1125 |
| BstNSI | RCATGY | 1 cut(s) | 769 |
| BstSCI | CCNGG | 3 cut(s) | 189, 430, 1123 |
| BstSFI | CTRYAG | 2 cut(s) | 693, 1104 |
| BstUI | CGCG | 1 cut(s) | 1204 |
| BstV1I | GCAGC | 5 cut(s) | 344, 641, 862, 1123, 1168 |
| BstV2I | GAAGAC | 4 cut(s) | 76, 192, 802, 1310 |
| BstX2I | RGATCY | 2 cut(s) | 116, 238 |
| BstYI | RGATCY | 2 cut(s) | 116, 238 |
| BstZ17I | GTATAC | 1 cut(s) | 771 |
| Bsu15I | ATCGAT | 1 cut(s) | 845 |
| BsuI | GTATCC | 1 cut(s) | 438 |
| BsuRI | GGCC | 3 cut(s) | 506, 535, 624 |
| BsuTUI | ATCGAT | 1 cut(s) | 845 |
| BtgI | CCRYGG | 1 cut(s) | 158 |
| BtgZI | GCGATG | 1 cut(s) | 1150 |
| BtsCI | GGATG | 1 cut(s) | 529 |
| BtsI | GCAGTG | 1 cut(s) | 906 |
| BtsIMutI | CAGTG | 1 cut(s) | 906 |
| BveI | ACCTGC | 1 cut(s) | 1345 |
| Cac8I | GCNNGC | 2 cut(s) | 312, 612 |
| CaiI | CAGNNNCTG | 1 cut(s) | 701 |
| CciI | TCATGA | 1 cut(s) | 642 |
| CfoI | GCGC | 1 cut(s) | 1204 |
| Cfr10I | RCCGGY | 1 cut(s) | 1036 |
| Cfr13I | GGNCC | 2 cut(s) | 207, 504 |
| ClaI | ATCGAT | 1 cut(s) | 845 |
| Csp6I | GTAC | 2 cut(s) | 583, 1259 |
| CviAII | CATG | 7 cut(s) | 559, 592, 643, 766, 926, 1055, 1215 |
| CviQI | GTAC | 2 cut(s) | 583, 1259 |
| DdeI | CTNAG | 4 cut(s) | 774, 836, 945, 1005 |
| DpnI | GATC | 6 cut(s) | 118, 240, 519, 528, 563, 1369 |
| DpnII | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| DraI | TTTAAA | 1 cut(s) | 49 |
| Eam1104I | CTCTTC | 4 cut(s) | 1233, 1237, 1266, 1271 |
| EarI | CTCTTC | 4 cut(s) | 1233, 1237, 1266, 1271 |
| Eco130I | CCWWGG | 1 cut(s) | 815 |
| Eco31I | GGTCTC | 1 cut(s) | 713 |
| Eco32I | GATATC | 1 cut(s) | 1324 |
| Eco47I | GGWCC | 1 cut(s) | 207 |
| Eco57I | CTGAAG | 1 cut(s) | 1218 |
| Eco88I | CYCGRG | 1 cut(s) | 654 |
| EcoO109I | RGGNCCY | 1 cut(s) | 207 |
| EcoRII | CCWGG | 2 cut(s) | 430, 1123 |
| EcoRV | GATATC | 1 cut(s) | 1324 |
| EcoT14I | CCWWGG | 1 cut(s) | 815 |
| ErhI | CCWWGG | 1 cut(s) | 815 |
| FaeI | CATG | 7 cut(s) | 562, 595, 646, 769, 929, 1058, 1218 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1025, 1057 |
| FatI | CATG | 7 cut(s) | 558, 591, 642, 765, 925, 1054, 1214 |
| FbaI | TGATCA | 1 cut(s) | 526 |
| FblI | GTMKAC | 1 cut(s) | 770 |
| Fnu4HI | GCNGC | 6 cut(s) | 56, 358, 630, 876, 1137, 1182 |
| FokI | GGATG | 1 cut(s) | 536 |
| Fsp4HI | GCNGC | 6 cut(s) | 56, 358, 630, 876, 1137, 1182 |
| FspBI | CTAG | 3 cut(s) | 611, 1193, 1316 |
| GlaI | GCGC | 1 cut(s) | 1203 |
| GluI | GCNGC | 6 cut(s) | 56, 358, 630, 876, 1137, 1182 |
| GsuI | CTGGAG | 2 cut(s) | 915, 1179 |
| HaeIII | GGCC | 3 cut(s) | 506, 535, 624 |
| HapII | CCGG | 5 cut(s) | 191, 251, 369, 521, 1037 |
| HhaI | GCGC | 1 cut(s) | 1204 |
| Hin1II | CATG | 7 cut(s) | 562, 595, 646, 769, 929, 1058, 1218 |
| Hin6I | GCGC | 1 cut(s) | 1202 |
| HinP1I | GCGC | 1 cut(s) | 1202 |
| HincII | GTYRAC | 1 cut(s) | 688 |
| HindII | GTYRAC | 1 cut(s) | 688 |
| HpaI | GTTAAC | 1 cut(s) | 688 |
| HpaII | CCGG | 5 cut(s) | 191, 251, 369, 521, 1037 |
| HphI | GGTGA | 2 cut(s) | 194, 1103 |
| Hpy166II | GTNNAC | 5 cut(s) | 379, 603, 688, 771, 983 |
| Hpy188III | TCNNGA | 8 cut(s) | 114, 142, 260, 280, 400, 521, 643, 656 |
| Hpy8I | GTNNAC | 5 cut(s) | 379, 603, 688, 771, 983 |
| Hpy99I | CGWCG | 3 cut(s) | 115, 224, 308 |
| HpyAV | CCTTC | 2 cut(s) | 573, 1358 |
| HpyCH4III | ACNGT | 7 cut(s) | 304, 324, 801, 1131, 1263, 1286, 1339 |
| HpyCH4IV | ACGT | 3 cut(s) | 110, 495, 1074 |
| HpyCH4V | TGCA | 6 cut(s) | 695, 878, 958, 1268, 1349, 1354 |
| HpyF3I | CTNAG | 4 cut(s) | 774, 836, 945, 1005 |
| HpySE526I | ACGT | 3 cut(s) | 110, 495, 1074 |
| Hsp92II | CATG | 7 cut(s) | 562, 595, 646, 769, 929, 1058, 1218 |
| HspAI | GCGC | 1 cut(s) | 1202 |
| Kpn2I | TCCGGA | 1 cut(s) | 520 |
| Ksp22I | TGATCA | 1 cut(s) | 526 |
| KspAI | GTTAAC | 1 cut(s) | 688 |
| Kzo9I | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| LmnI | GCTCC | 2 cut(s) | 698, 896 |
| Lsp1109I | GCAGC | 5 cut(s) | 344, 641, 862, 1123, 1168 |
| LweI | GCATC | 3 cut(s) | 699, 959, 961 |
| MaeI | CTAG | 3 cut(s) | 611, 1193, 1316 |
| MaeII | ACGT | 3 cut(s) | 110, 495, 1074 |
| MaeIII | GTNAC | 5 cut(s) | 21, 296, 668, 901, 1280 |
| MalI | GATC | 6 cut(s) | 118, 240, 519, 528, 563, 1369 |
| MboI | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| MflI | RGATCY | 2 cut(s) | 116, 238 |
| MluCI | AATT | 2 cut(s) | 752, 1290 |
| MlyI | GAGTC | 3 cut(s) | 561, 814, 1170 |
| MnlI | CCTC | 9 cut(s) | 27, 79, 98, 229, 329, 458, 581, 834, 859 |
| MroI | TCCGGA | 1 cut(s) | 520 |
| MseI | TTAA | 4 cut(s) | 48, 452, 687, 1341 |
| MslI | CAYNNNNRTG | 1 cut(s) | 557 |
| MspA1I | CMGCKG | 2 cut(s) | 545, 1181 |
| MspI | CCGG | 5 cut(s) | 191, 251, 369, 521, 1037 |
| MspR9I | CCNGG | 3 cut(s) | 191, 432, 1125 |
| Mva1269I | GAATGC | 1 cut(s) | 895 |
| MvaI | CCWGG | 2 cut(s) | 432, 1125 |
| MvnI | CGCG | 1 cut(s) | 1204 |
| NciI | CCSGG | 1 cut(s) | 191 |
| NdeII | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| NheI | GCTAGC | 1 cut(s) | 610 |
| NlaIII | CATG | 7 cut(s) | 562, 595, 646, 769, 929, 1058, 1218 |
| NlaIV | GGNNCC | 2 cut(s) | 208, 240 |
| NmuCI | GTSAC | 1 cut(s) | 901 |
| NspI | RCATGY | 1 cut(s) | 769 |
| NspV | TTCGAA | 1 cut(s) | 1301 |
| PaeR7I | CTCGAG | 1 cut(s) | 654 |
| PagI | TCATGA | 1 cut(s) | 642 |
| PctI | GAATGC | 1 cut(s) | 895 |
| PfeI | GAWTC | 8 cut(s) | 385, 922, 935, 941, 1029, 1048, 1151, 1186 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1220 |
| PkrI | GCNGC | 6 cut(s) | 57, 359, 631, 877, 1138, 1183 |
| PleI | GAGTC | 3 cut(s) | 561, 814, 1169 |
| PpsI | GAGTC | 3 cut(s) | 561, 814, 1169 |
| PpuMI | RGGWCCY | 1 cut(s) | 207 |
| PsiI | TTATAA | 1 cut(s) | 1013 |
| Psp1406I | AACGTT | 1 cut(s) | 1074 |
| Psp5II | RGGWCCY | 1 cut(s) | 207 |
| Psp6I | CCWGG | 2 cut(s) | 430, 1123 |
| PspGI | CCWGG | 2 cut(s) | 430, 1123 |
| PspN4I | GGNNCC | 2 cut(s) | 208, 240 |
| PspPI | GGNCC | 2 cut(s) | 207, 504 |
| PspPPI | RGGWCCY | 1 cut(s) | 207 |
| PstI | CTGCAG | 1 cut(s) | 697 |
| PstNI | CAGNNNCTG | 1 cut(s) | 701 |
| PsuI | RGATCY | 2 cut(s) | 116, 238 |
| PvuII | CAGCTG | 2 cut(s) | 545, 1181 |
| RsaI | GTAC | 2 cut(s) | 584, 1260 |
| RsaNI | GTAC | 2 cut(s) | 583, 1259 |
| RseI | CAYNNNNRTG | 1 cut(s) | 557 |
| SaqAI | TTAA | 4 cut(s) | 48, 452, 687, 1341 |
| SatI | GCNGC | 6 cut(s) | 56, 358, 630, 876, 1137, 1182 |
| Sau3AI | GATC | 6 cut(s) | 116, 238, 517, 526, 561, 1367 |
| Sau96I | GGNCC | 2 cut(s) | 207, 504 |
| SchI | GAGTC | 3 cut(s) | 561, 814, 1170 |
| ScrFI | CCNGG | 3 cut(s) | 191, 432, 1125 |
| SfaNI | GCATC | 3 cut(s) | 699, 959, 961 |
| SfcI | CTRYAG | 2 cut(s) | 693, 1104 |
| Sfr274I | CTCGAG | 1 cut(s) | 654 |
| SfuI | TTCGAA | 1 cut(s) | 1301 |
| SinI | GGWCC | 1 cut(s) | 207 |
| SlaI | CTCGAG | 1 cut(s) | 654 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 557 |
| SmlI | CTYRAG | 2 cut(s) | 140, 654 |
| SmoI | CTYRAG | 2 cut(s) | 140, 654 |
| Sse9I | AATT | 2 cut(s) | 752, 1290 |
| SsiI | CCGC | 2 cut(s) | 56, 180 |
| SspMI | CTAG | 3 cut(s) | 611, 1193, 1316 |
| StyD4I | CCNGG | 3 cut(s) | 189, 430, 1123 |
| StyI | CCWWGG | 1 cut(s) | 815 |
| TaaI | ACNGT | 7 cut(s) | 304, 324, 801, 1131, 1263, 1286, 1339 |
| TaiI | ACGT | 3 cut(s) | 113, 498, 1077 |
| TaqI | TCGA | 7 cut(s) | 113, 165, 306, 655, 845, 1301, 1326 |
| TaqII | GACCGA | 1 cut(s) | 121 |
| TasI | AATT | 2 cut(s) | 752, 1290 |
| TauI | GCSGC | 1 cut(s) | 58 |
| TfiI | GAWTC | 8 cut(s) | 385, 922, 935, 941, 1029, 1048, 1151, 1186 |
| Tru1I | TTAA | 4 cut(s) | 48, 452, 687, 1341 |
| Tru9I | TTAA | 4 cut(s) | 48, 452, 687, 1341 |
| TscAI | CASTG | 1 cut(s) | 906 |
| TseFI | GTSAC | 1 cut(s) | 901 |
| TseI | GCWGC | 5 cut(s) | 357, 629, 875, 1136, 1181 |
| Tsp45I | GTSAC | 1 cut(s) | 901 |
| TspDTI | ATGAA | 3 cut(s) | 631, 914, 1102 |
| TspGWI | ACGGA | 3 cut(s) | 147, 237, 868 |
| TspRI | CASTG | 1 cut(s) | 906 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1220 |
| VpaK11BI | GGWCC | 1 cut(s) | 207 |
| XceI | RCATGY | 1 cut(s) | 769 |
| XhoI | CTCGAG | 1 cut(s) | 654 |
| XmiI | GTMKAC | 1 cut(s) | 770 |
| XspI | CTAG | 3 cut(s) | 611, 1193, 1316 |