Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005444

Physical Location & Seq

Genomic Coordinates Reverse (-)

5845675 .. 5850934

Gene Structure 5260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G17110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGCTTGAACCAAGGGGAGCGGACATACCAATATTGTTCCTGGTTTTGGTTGTACTTCCTGTGGTAGCTTACATTTTATTAGGAAAATGGAGTAACATTTCTGAAAAAAGAGTAAGGGCTAACTTGCTGGCTCAGATGGCAGCTGAAGAAGCTTTAAGAGCTGAGACCGTGGTTAATGCGGATAGAGGTGTAAGATTTGAGAGTGTGGCTACTGAGAATAGGGCTCAAAGAACCAGGACCAAGACTGTTTCTGCTGGTGGTGGTGCTGTAAGAGCAGAGTTTGACGCTGGTGCGAGAGAAACTGTAGCCGAGCAGAGATCTGATTCCGTGACTGCTACATGTGGGGTTACAGTTGTGGCTCCTGTCAATAATAATGAGTTACATGTATGTGCAAGGTGTTTTGGTCCTGCTAAGACACGTTGCTCGAGATGTAAATCTGTTAGATACTGCTCCGGGAAGTGTCAAATAATTCACTGGAGGGTAGCTCACAAAGATGAATGTGTCCCAGTGGAGTCTTGCTCTTCGTCATCTGAGAGGGTTTCCTTCGAGAAAGATTCTGTTTTGTATGACCATGGCATGGATTCTACAATGTATAGTAACAATACTACGCAGGCAGCAAAGGGAAAGACTTCAAAAAGCTCTGTGGATTTTGCTAGCTTGGGTATCTCTCAGAATGATATTACGCCACAAATCAACACGCAAGGGAGGAAAAGCGTAGGAAAACAACATTCTTCCAAGGCCAACCGAGAATCATGTAGAAGAGACAGTGCTACTGTGTTTGATTCTTCTGATGAAGCTGCTTCTGCTGGTGGCGATAACAAGACGAGTCACATAAAACATAAGTCGAGAGGCAACAGTTATGCTGCAGAAACAAATCCTAGAAGGCATTCTGTTGACAGCTCTGCTGTGCAAATGAATGGACAATCTTTTGTAAGTGGTATGCAGGAAAGTCACAAACACGAAAACAATTTGGGAGTCAGAAGCTCTTTTGGTTGTCCAAACACACAATATCCTTCAAACGGGACCAGAACTGCAACACTGCCCAGAACAGGTATTAACAAATCTGGAGAACAGTCATGCACAGAGACAAGTAAGAAGGGGCAAGTCGCTGCAGTATCAAAGACTGTTCGGTCTAAGGATACTGGCATCAGTGAAGAAAGCAATGGCATCTCCTCAACGATGGGAATAATGAAGATGATGGGTTTAAGAAATTCTACAAAGCATGATGATCGATATAAGAACCTGAAAATGCTTTTTCCATACGAGGAATTTCTTAAATTCTTTCAGTGTGAAGTGTTTGATTTATCACCTAGGGGGCTTGTAAATTGTGGAAACAGTTGCTATGCGAACGCTGTTTTGCAATCCTTAACATGTACAAAACCACTCGTTGCTTATTTGCTTCGACGATCACATTCAAGATCATGTTCTGGGAAAGATTGGTGCCTTATGTGTGAACTTGAGCAACATGTAATGATGCTAAGAGAATCCGGAGGTCCACTTTCTGCTAGCAGAATTCTCTCACACATGCGAAGTATAAATTGTCAGATTGGTGATGGGAGTCAGGAAGATGCTCATGAGTTCTTAAGGCTTTTGGTTGCCTCTATGCAATCCATATGTTTGGAGAGACTTGGAGGTGAGACTAAAGTGGATCCGAGACTGCAAGAAACAACCTTAGTTCAACATATGTTTGGTGGACGTCTCCGCTCAAAGGTTAAATGCCTGAGGTGTGATCATGAATCAGAAAGATACGAGAATATAATGGATCTCACATTAGAGATATACGGTTGGGTAGAATCTCTTCAAGATGCCTTGACTCAGTTTACTAGACCGGAAGATCTCGACGGAGAAAACATGTATAGATGCAGCAGGTGCGCTGGATATGTTAGAGCGAGGAAAGAATTGAGCATTCATGAAGCACCAAACATTCTCACAATTGTTCTTAAGCGATTCCAGGAAGGAAGATACGGGAAAATAAACAAATGTATAAGTTTTCCTGAAATGCTAGACATGATTCCTTTCATGACAAGAACCGGAGACGTTCCTCCGCTTTATATGCTTTACGCCGTCATAGTTCACTTGGATACTCTCAACGCATCTTTCTCGGGTCACTACATTTCGTATGTCAAAGATTTGAGAGGGAATTGGTACAGAATCGATGATTCAGAGATTCATCCAGTGCCAATGACTCAAGTTATGTCAGAAGGAGCTTACATGTTGTTCTACATGAGATCGTATCCACGTCCTCAAAGAGGAGAGCACAATGGAAAAGCTCCGGTTCACCATTCGCAACCAAGAAACGAGATGAAGGAACAGAGGAAACCTGTTAACCGCTTCAAACCGAGAGCGGATCACAAGAACACAGAGTCATCATCAAGCGAATGGTCTCTCTTCACAAGCTCAGACGAGGCTTCTTTCACCACAGAATCAACCAGAGACTCTTTCAGCACCATAGACTACACAGATGTTTGCCACGTCGTAGACTCTTCTTCTCCTTTCGCCATCTTCAACAACGTATACCACAACGTAGAGCCATCGCCACACAACACTGTCGCTTGCAGAATGTTCTCAGGTACCAAACCCGAAACCCGGTATTTCGTGGAGCAAGAAACAAATCACAACAACACGGTCGTGCTGGACGCAACACCATCACTATATCCTATTCCAGCACCGTATCCGCCCCATGATTATTACGATCAGAGTATGTATGTAAATTACGAGACTAACCCAGAATTTAACAATGGTCAGGATCAGGATAGAACTTACAGTTACTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

924

Amino Acids

103.68

Weight (kDa)

8.01

Isoelectric Point (pI)

52.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	130 - 167	2e-09	MYND finger
UCH	PF00443	438 - 741	4.5e-53	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	439 - 722	1.9e-21	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17110 AT1G17110 AT1G17110
fragaria_vesca	FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820
malus_domestica	MD05G1206800.v1.1 MD10G1193900.v1.1
prunus_persica	Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1
pyrus_communis	pycom05g19290 pycom10g16770
rosa_chinensis	RchiOBHm_Chr5g0028031
rosa_laevigata	RLG00000033059
rosa_multiflora	Rmu_sc0009432.1_g000009
rosa_roxburghii	Rroxscaffold_1G00051630
rosa_rugosa	Rorug05G0103600
rosa_samantha	Rh5AG197200 Rh5BG195400 Rh5CG215600 Rh5DG197000
rosa_wichuraiana	Rw5G017980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1857
AasI	GACNNNNNNGTC	1 cut(s)	1129
AatII	GACGTC	1 cut(s)	1699
Acc36I	ACCTGC	1 cut(s)	1857
Acc65I	GGTACC	1 cut(s)	2570
AccB1I	GGYRCC	2 cut(s)	1440, 2570
AccB7I	CCANNNNNTGG	1 cut(s)	577
AccBSI	CCGCTC	3 cut(s)	20, 1704, 2345
AccI	GTMKAC	2 cut(s)	2478, 2514
AccIII	TCCGGA	1 cut(s)	1487
AciI	CCGC	7 cut(s)	20, 179, 1702, 2045, 2329, 2345, 2675
AclWI	GGATC	5 cut(s)	1643, 1656, 1770, 2355, 2754
AcsI	RAATTY	5 cut(s)	1210, 1268, 1277, 1512, 2729
AcuI	CTGAAG	1 cut(s)	165
AcyI	GRCGYC	1 cut(s)	1696
AfaI	GTAC	4 cut(s)	54, 1375, 2147, 2572
AfiI	CCNNNNNNNGG	7 cut(s)	46, 577, 1019, 1049, 1708, 2249, 2586
AflII	CTTAAG	2 cut(s)	1582, 1940
AflIII	ACRYGT	7 cut(s)	338, 382, 416, 1370, 1465, 1851, 2211
AgsI	TTSAA	8 cut(s)	8, 633, 1017, 1416, 1679, 1802, 2335, 2506
AjiI	CACGTC	2 cut(s)	2240, 2473
AjnI	CCWGG	3 cut(s)	39, 233, 1950
AleI	CACNNNNGTG	1 cut(s)	2627
Alw21I	GWGCWC	1 cut(s)	2259
AlwI	GGATC	5 cut(s)	1643, 1656, 1770, 2355, 2754
AlwNI	CAGNNNCTG	1 cut(s)	2769
Ama87I	CYCGRG	2 cut(s)	424, 2101
Aor13HI	TCCGGA	1 cut(s)	1487
AoxI	GGCC	1 cut(s)	738
ApeKI	GCWGC	6 cut(s)	140, 614, 797, 863, 1109, 1863
ApoI	RAATTY	5 cut(s)	1210, 1268, 1277, 1512, 2729
Asp700I	GAANNNNTTC	3 cut(s)	628, 886, 1797
Asp718I	GGTACC	1 cut(s)	2570
AspA2I	CCTAGG	1 cut(s)	1310
AspLEI	GCGC	1 cut(s)	1874
AspS9I	GGNCC	4 cut(s)	237, 404, 1023, 1493
AsuC2I	CCSGG	2 cut(s)	454, 2587
AsuHPI	GGTGA	5 cut(s)	1299, 1562, 1646, 2270, 2407
AsuNHI	GCTAGC	2 cut(s)	653, 1505
AvaI	CYCGRG	2 cut(s)	424, 2101
AvaII	GGWCC	4 cut(s)	237, 404, 1023, 1493
AvrII	CCTAGG	1 cut(s)	1310
AxyI	CCTNAGG	1 cut(s)	1721
BamHI	GGATCC	1 cut(s)	1648
BanI	GGYRCC	2 cut(s)	1440, 2570
BanII	GRGCYC	1 cut(s)	226
BarI	GAAGNNNNNNTAC	2 cut(s)	1782, 1814
Bbv12I	GWGCWC	1 cut(s)	2259
BbvI	GCAGC	6 cut(s)	152, 626, 784, 850, 1096, 1875
BccI	CCATC	7 cut(s)	130, 1174, 1192, 1547, 2507, 2539, 2653
BceAI	ACGGC	1 cut(s)	2048
BcgI	CGANNNNNNTGC	4 cut(s)	1211, 1245, 2082, 2116
BciT130I	CCWGG	3 cut(s)	41, 235, 1952
BciVI	GTATCC	4 cut(s)	1132, 2074, 2244, 2682
BclI	TGATCA	1 cut(s)	1729
BcnI	CCSGG	2 cut(s)	454, 2587
BfaI	CTAG	6 cut(s)	654, 879, 1311, 1506, 1824, 2003
BfmI	CTRYAG	3 cut(s)	303, 864, 1110
BfrI	CTTAAG	2 cut(s)	1582, 1940
BfuAI	ACCTGC	1 cut(s)	1857
BfuI	GTATCC	4 cut(s)	1132, 2074, 2244, 2682
BglII	AGATCT	2 cut(s)	317, 1834
BisI	GCNGC	6 cut(s)	141, 615, 798, 864, 1110, 1864
BlnI	CCTAGG	1 cut(s)	1310
BlsI	GCNGC	6 cut(s)	142, 616, 799, 865, 1111, 1865
Bme1390I	CCNGG	5 cut(s)	41, 235, 454, 1952, 2587
Bme18I	GGWCC	4 cut(s)	237, 404, 1023, 1493
BmeT110I	CYCGRG	2 cut(s)	424, 2101
BmgBI	CACGTC	2 cut(s)	2240, 2473
BmgT120I	GGNCC	4 cut(s)	237, 404, 1023, 1493
BmiI	GGNNCC	5 cut(s)	360, 1024, 1442, 1650, 2572
BmrFI	CCNGG	5 cut(s)	41, 235, 454, 1952, 2587
BmrI	ACTGGG	1 cut(s)	500
BmsI	GCATC	7 cut(s)	1155, 1176, 1464, 1558, 1795, 1850, 2102
BmtI	GCTAGC	2 cut(s)	657, 1509
BmuI	ACTGGG	1 cut(s)	500
BplI	GAGNNNNNCTC	4 cut(s)	469, 501, 503, 535
BpmI	CTGGAG	2 cut(s)	496, 1086
BpuEI	CTTGAG	2 cut(s)	1478, 2172
BpuMI	CCSGG	2 cut(s)	454, 2587
Bsa29I	ATCGAT	2 cut(s)	1231, 2154
BsaBI	GATNNNNATC	1 cut(s)	433
BsaHI	GRCGYC	1 cut(s)	1696
BsaI	GGTCTC	2 cut(s)	158, 2388
BsaJI	CCNNGG	5 cut(s)	11, 168, 571, 735, 1310
BsaWI	WCCGGW	4 cut(s)	1487, 1828, 2030, 2272
Bsc4I	CCNNNNNNNGG	7 cut(s)	46, 577, 1019, 1049, 1708, 2249, 2586
Bse1I	ACTGG	5 cut(s)	479, 506, 1147, 2174, 2774
Bse21I	CCTNAGG	1 cut(s)	1721
Bse3DI	GCAATG	1 cut(s)	1168
Bse8I	GATNNNNATC	1 cut(s)	433
BseAI	TCCGGA	1 cut(s)	1487
BseBI	CCWGG	3 cut(s)	41, 235, 1952
BseCI	ATCGAT	2 cut(s)	1231, 2154
BseDI	CCNNGG	5 cut(s)	11, 168, 571, 735, 1310
BseGI	GGATG	1 cut(s)	2170
BseJI	GATNNNNATC	1 cut(s)	433
BseLI	CCNNNNNNNGG	7 cut(s)	46, 577, 1019, 1049, 1708, 2249, 2586
BseMI	GCAATG	1 cut(s)	1168
BseMII	CTCAG	9 cut(s)	146, 153, 204, 522, 683, 1712, 1829, 2412, 2580
BseNI	ACTGG	5 cut(s)	479, 506, 1147, 2174, 2774
BseRI	GAGGAG	2 cut(s)	1162, 2265
BseXI	GCAGC	6 cut(s)	152, 626, 784, 850, 1096, 1875
Bsh1285I	CGRYCG	1 cut(s)	2628
BshFI	GGCC	1 cut(s)	740
BshNI	GGYRCC	2 cut(s)	1440, 2570
BshVI	ATCGAT	2 cut(s)	1231, 2154
BsiEI	CGRYCG	1 cut(s)	2628
BsiHKAI	GWGCWC	1 cut(s)	2259
BsiHKCI	CYCGRG	2 cut(s)	424, 2101
BsiSI	CCGG	6 cut(s)	453, 1488, 1829, 2031, 2273, 2587
BslFI	GGGAC	2 cut(s)	488, 1036
BslI	CCNNNNNNNGG	7 cut(s)	46, 577, 1019, 1049, 1708, 2249, 2586
BsmBI	CGTCTC	2 cut(s)	1703, 2028
BsmFI	GGGAC	2 cut(s)	488, 1036
BsmI	GAATGC	2 cut(s)	886, 1905
BsnI	GGCC	1 cut(s)	740
Bso31I	GGTCTC	2 cut(s)	158, 2388
BsoBI	CYCGRG	2 cut(s)	424, 2101
Bsp1286I	GDGCHC	2 cut(s)	226, 2259
Bsp13I	TCCGGA	1 cut(s)	1487
Bsp1407I	TGTACA	1 cut(s)	1373
Bsp19I	CCATGG	1 cut(s)	571
BspACI	CCGC	7 cut(s)	20, 179, 1702, 2045, 2329, 2345, 2675
BspANI	GGCC	1 cut(s)	740
BspCNI	CTCAG	9 cut(s)	145, 154, 205, 523, 682, 1713, 1828, 2411, 2579
BspDI	ATCGAT	2 cut(s)	1231, 2154
BspEI	TCCGGA	1 cut(s)	1487
BspHI	TCATGA	4 cut(s)	1573, 1732, 1909, 2019
BspLI	GGNNCC	5 cut(s)	360, 1024, 1442, 1650, 2572
BspMAI	CTGCAG	2 cut(s)	868, 1114
BspMI	ACCTGC	1 cut(s)	1857
BspOI	GCTAGC	2 cut(s)	657, 1509
BspPI	GGATC	5 cut(s)	1643, 1656, 1770, 2355, 2754
BspQI	GCTCTTC	1 cut(s)	526
BspT107I	GGYRCC	2 cut(s)	1440, 2570
BspTI	CTTAAG	2 cut(s)	1582, 1940
BspTNI	GGTCTC	2 cut(s)	158, 2388
BsrBI	CCGCTC	3 cut(s)	20, 1704, 2345
BsrDI	GCAATG	1 cut(s)	1168
BsrGI	TGTACA	1 cut(s)	1373
BsrI	ACTGG	5 cut(s)	479, 506, 1147, 2174, 2774
BssECI	CCNNGG	5 cut(s)	11, 168, 571, 735, 1310
BssNAI	GTATAC	1 cut(s)	2515
BssNI	GRCGYC	1 cut(s)	1696
BssT1I	CCWWGG	4 cut(s)	11, 571, 735, 1310
Bst1107I	GTATAC	1 cut(s)	2515
Bst2UI	CCWGG	3 cut(s)	41, 235, 1952
Bst6I	CTCTTC	5 cut(s)	526, 754, 1803, 2393, 2488
BstACI	GRCGYC	1 cut(s)	1696
BstAFI	CTTAAG	2 cut(s)	1582, 1940
BstAPI	GCANNNNNTGC	1 cut(s)	1869
BstAUI	TGTACA	1 cut(s)	1373
BstC8I	GCNNGC	5 cut(s)	129, 612, 655, 1507, 2554
BstDSI	CCRYGG	2 cut(s)	168, 571
BstENI	CCTNNNNNAGG	1 cut(s)	2247
BstF5I	GGATG	1 cut(s)	2170
BstHHI	GCGC	1 cut(s)	1874
BstMCI	CGRYCG	1 cut(s)	2628
BstMWI	GCNNNNNNNGC	7 cut(s)	137, 149, 158, 272, 803, 1869, 2053
BstNI	CCWGG	3 cut(s)	41, 235, 1952
BstNSI	RCATGY	7 cut(s)	342, 386, 1374, 1469, 1528, 1855, 2215
BstSCI	CCNGG	5 cut(s)	39, 233, 452, 1950, 2585
BstSFI	CTRYAG	3 cut(s)	303, 864, 1110
BstV1I	GCAGC	6 cut(s)	152, 626, 784, 850, 1096, 1875
BstX2I	RGATCY	4 cut(s)	317, 1648, 1762, 1834
BstXI	CCANNNNNNTGG	1 cut(s)	1618
BstYI	RGATCY	4 cut(s)	317, 1648, 1762, 1834
BstZ17I	GTATAC	1 cut(s)	2515
Bsu15I	ATCGAT	2 cut(s)	1231, 2154
Bsu36I	CCTNAGG	1 cut(s)	1721
BsuI	GTATCC	4 cut(s)	1132, 2074, 2244, 2682
BsuRI	GGCC	1 cut(s)	740
BsuTUI	ATCGAT	2 cut(s)	1231, 2154
BtgI	CCRYGG	2 cut(s)	168, 571
BtgZI	GCGATG	1 cut(s)	2517
BtrI	CACGTC	2 cut(s)	2240, 2473
BtsCI	GGATG	1 cut(s)	2170
BtsI	GCAGTG	1 cut(s)	1037
BtsIMutI	CAGTG	8 cut(s)	472, 513, 772, 1037, 1156, 1292, 2181, 2544
BveI	ACCTGC	1 cut(s)	1857
Cac8I	GCNNGC	5 cut(s)	129, 612, 655, 1507, 2554
CaiI	CAGNNNCTG	1 cut(s)	2769
CciI	TCATGA	4 cut(s)	1573, 1732, 1909, 2019
CfoI	GCGC	1 cut(s)	1874
Cfr13I	GGNCC	4 cut(s)	237, 404, 1023, 1493
ClaI	ATCGAT	2 cut(s)	1231, 2154
CseI	GACGC	2 cut(s)	293, 2645
Csp6I	GTAC	4 cut(s)	53, 1374, 2146, 2571
CviQI	GTAC	4 cut(s)	53, 1374, 2146, 2571
DrdI	GACNNNNNNGTC	1 cut(s)	1129
DseDI	GACNNNNNNGTC	1 cut(s)	1129
Eam1104I	CTCTTC	5 cut(s)	526, 754, 1803, 2393, 2488
EarI	CTCTTC	5 cut(s)	526, 754, 1803, 2393, 2488
EciI	GGCGGA	1 cut(s)	2664
Eco130I	CCWWGG	4 cut(s)	11, 571, 735, 1310
Eco24I	GRGCYC	1 cut(s)	226
Eco31I	GGTCTC	2 cut(s)	158, 2388
Eco47I	GGWCC	4 cut(s)	237, 404, 1023, 1493
Eco57I	CTGAAG	1 cut(s)	165
Eco81I	CCTNAGG	1 cut(s)	1721
Eco88I	CYCGRG	2 cut(s)	424, 2101
EcoNI	CCTNNNNNAGG	1 cut(s)	2247
EcoRI	GAATTC	1 cut(s)	1512
EcoRII	CCWGG	3 cut(s)	39, 233, 1950
EcoT14I	CCWWGG	4 cut(s)	11, 571, 735, 1310
EcoT38I	GRGCYC	1 cut(s)	226
ErhI	CCWWGG	4 cut(s)	11, 571, 735, 1310
Esp3I	CGTCTC	2 cut(s)	1703, 2028
FaqI	GGGAC	2 cut(s)	488, 1036
FauNDI	CATATG	2 cut(s)	1613, 1683
FbaI	TGATCA	1 cut(s)	1729
FblI	GTMKAC	2 cut(s)	2478, 2514
Fnu4HI	GCNGC	6 cut(s)	141, 615, 798, 864, 1110, 1864
FokI	GGATG	1 cut(s)	2157
FriOI	GRGCYC	1 cut(s)	226
Fsp4HI	GCNGC	6 cut(s)	141, 615, 798, 864, 1110, 1864
FspBI	CTAG	6 cut(s)	654, 879, 1311, 1506, 1824, 2003
GlaI	GCGC	1 cut(s)	1873
GluI	GCNGC	6 cut(s)	141, 615, 798, 864, 1110, 1864
GsuI	CTGGAG	2 cut(s)	496, 1086
HaeIII	GGCC	1 cut(s)	740
HapII	CCGG	6 cut(s)	453, 1488, 1829, 2031, 2273, 2587
HgaI	GACGC	2 cut(s)	293, 2645
HhaI	GCGC	1 cut(s)	1874
Hin1I	GRCGYC	1 cut(s)	1696
Hin6I	GCGC	1 cut(s)	1872
HinP1I	GCGC	1 cut(s)	1872
HincII	GTYRAC	2 cut(s)	895, 2326
HindII	GTYRAC	2 cut(s)	895, 2326
HindIII	AAGCTT	1 cut(s)	150
HpaI	GTTAAC	1 cut(s)	2326
HpaII	CCGG	6 cut(s)	453, 1488, 1829, 2031, 2273, 2587
HphI	GGTGA	5 cut(s)	1299, 1562, 1646, 2270, 2407
Hpy99I	CGWCG	3 cut(s)	1407, 1844, 2477
HpyAV	CCTTC	7 cut(s)	553, 876, 1023, 1090, 1949, 2195, 2299
HpyCH4IV	ACGT	7 cut(s)	418, 1696, 2037, 2239, 2472, 2511, 2523
HpyF10VI	GCNNNNNNNGC	7 cut(s)	137, 149, 158, 272, 803, 1869, 2053
HpySE526I	ACGT	7 cut(s)	418, 1696, 2037, 2239, 2472, 2511, 2523
Hsp92I	GRCGYC	1 cut(s)	1696
HspAI	GCGC	1 cut(s)	1872
Kpn2I	TCCGGA	1 cut(s)	1487
KpnI	GGTACC	1 cut(s)	2574
Ksp22I	TGATCA	1 cut(s)	1729
KspAI	GTTAAC	1 cut(s)	2326
LguI	GCTCTTC	1 cut(s)	526
LmnI	GCTCC	6 cut(s)	17, 364, 455, 2204, 2275, 2599
Lsp1109I	GCAGC	6 cut(s)	152, 626, 784, 850, 1096, 1875
LweI	GCATC	7 cut(s)	1155, 1176, 1464, 1558, 1795, 1850, 2102
MaeI	CTAG	6 cut(s)	654, 879, 1311, 1506, 1824, 2003
MaeII	ACGT	7 cut(s)	418, 1696, 2037, 2239, 2472, 2511, 2523
MaeIII	GTNAC	9 cut(s)	92, 328, 346, 378, 596, 827, 950, 2105, 2765
MbiI	CCGCTC	3 cut(s)	20, 1704, 2345
MfeI	CAATTG	1 cut(s)	1932
MflI	RGATCY	4 cut(s)	317, 1648, 1762, 1834
MhlI	GDGCHC	2 cut(s)	226, 2259
MlyI	GAGTC	9 cut(s)	521, 835, 984, 1567, 1807, 2179, 2372, 2429, 2474
MroI	TCCGGA	1 cut(s)	1487
MroXI	GAANNNNTTC	3 cut(s)	628, 886, 1797
MslI	CAYNNNNRTG	3 cut(s)	387, 492, 2627
MspA1I	CMGCKG	1 cut(s)	143
MspCI	CTTAAG	2 cut(s)	1582, 1940
MspI	CCGG	6 cut(s)	453, 1488, 1829, 2031, 2273, 2587
MspR9I	CCNGG	5 cut(s)	41, 235, 454, 1952, 2587
MunI	CAATTG	1 cut(s)	1932
Mva1269I	GAATGC	2 cut(s)	886, 1905
MvaI	CCWGG	3 cut(s)	41, 235, 1952
MwoI	GCNNNNNNNGC	7 cut(s)	137, 149, 158, 272, 803, 1869, 2053
NciI	CCSGG	2 cut(s)	454, 2587
NcoI	CCATGG	1 cut(s)	571
NdeI	CATATG	2 cut(s)	1613, 1683
NheI	GCTAGC	2 cut(s)	653, 1505
NlaIV	GGNNCC	5 cut(s)	360, 1024, 1442, 1650, 2572
NmeAIII	GCCGAG	1 cut(s)	334
NmuCI	GTSAC	4 cut(s)	328, 827, 950, 2105
NspI	RCATGY	7 cut(s)	342, 386, 1374, 1469, 1528, 1855, 2215
OliI	CACNNNNGTG	1 cut(s)	2627
PaeR7I	CTCGAG	1 cut(s)	424
PagI	TCATGA	4 cut(s)	1573, 1732, 1909, 2019
PaqCI	CACCTGC	1 cut(s)	1857
PciI	ACATGT	6 cut(s)	338, 382, 1370, 1465, 1851, 2211
PciSI	GCTCTTC	1 cut(s)	526
PctI	GAATGC	2 cut(s)	886, 1905
PdmI	GAANNNNTTC	3 cut(s)	628, 886, 1797
PflMI	CCANNNNNTGG	1 cut(s)	577
PfoI	TCCNGGA	2 cut(s)	452, 1950
PkrI	GCNGC	6 cut(s)	142, 616, 799, 865, 1111, 1865
PleI	GAGTC	9 cut(s)	520, 834, 983, 1566, 1807, 2179, 2371, 2429, 2474
PpsI	GAGTC	9 cut(s)	520, 834, 983, 1566, 1807, 2179, 2371, 2429, 2474
PscI	ACATGT	6 cut(s)	338, 382, 1370, 1465, 1851, 2211
Psp6I	CCWGG	3 cut(s)	39, 233, 1950
PspGI	CCWGG	3 cut(s)	39, 233, 1950
PspN4I	GGNNCC	5 cut(s)	360, 1024, 1442, 1650, 2572
PspPI	GGNCC	4 cut(s)	237, 404, 1023, 1493
PstI	CTGCAG	2 cut(s)	868, 1114
PstNI	CAGNNNCTG	1 cut(s)	2769
PsuI	RGATCY	4 cut(s)	317, 1648, 1762, 1834
PvuII	CAGCTG	1 cut(s)	143
RsaI	GTAC	4 cut(s)	54, 1375, 2147, 2572
RsaNI	GTAC	4 cut(s)	53, 1374, 2146, 2571
RseI	CAYNNNNRTG	3 cut(s)	387, 492, 2627
SapI	GCTCTTC	1 cut(s)	526
SatI	GCNGC	6 cut(s)	141, 615, 798, 864, 1110, 1864
Sau96I	GGNCC	4 cut(s)	237, 404, 1023, 1493
SchI	GAGTC	9 cut(s)	521, 835, 984, 1567, 1807, 2179, 2372, 2429, 2474
ScrFI	CCNGG	5 cut(s)	41, 235, 454, 1952, 2587
SduI	GDGCHC	2 cut(s)	226, 2259
SfaNI	GCATC	7 cut(s)	1155, 1176, 1464, 1558, 1795, 1850, 2102
SfcI	CTRYAG	3 cut(s)	303, 864, 1110
Sfr274I	CTCGAG	1 cut(s)	424
SinI	GGWCC	4 cut(s)	237, 404, 1023, 1493
SlaI	CTCGAG	1 cut(s)	424
SmiMI	CAYNNNNRTG	3 cut(s)	387, 492, 2627
SmlI	CTYRAG	5 cut(s)	424, 1457, 1582, 1940, 2187
SmoI	CTYRAG	5 cut(s)	424, 1457, 1582, 1940, 2187
SsiI	CCGC	7 cut(s)	20, 179, 1702, 2045, 2329, 2345, 2675
SspI	AATATT	1 cut(s)	33
SspMI	CTAG	6 cut(s)	654, 879, 1311, 1506, 1824, 2003
StyD4I	CCNGG	5 cut(s)	39, 233, 452, 1950, 2585
StyI	CCWWGG	4 cut(s)	11, 571, 735, 1310
TaiI	ACGT	7 cut(s)	421, 1699, 2040, 2242, 2475, 2514, 2526
TaqI	TCGA	7 cut(s)	425, 546, 845, 1231, 1402, 1839, 2154
TaqII	GACCGA	1 cut(s)	1119
TatI	WGTACW	2 cut(s)	52, 1373
TscAI	CASTG	8 cut(s)	479, 513, 772, 1044, 1156, 1292, 2181, 2551
TseFI	GTSAC	4 cut(s)	328, 827, 950, 2105
TseI	GCWGC	6 cut(s)	140, 614, 797, 863, 1109, 1863
Tsp45I	GTSAC	4 cut(s)	328, 827, 950, 2105
TspGWI	ACGGA	2 cut(s)	316, 1857
TspRI	CASTG	8 cut(s)	479, 513, 772, 1044, 1156, 1292, 2181, 2551
Van91I	CCANNNNNTGG	1 cut(s)	577
Vha464I	CTTAAG	2 cut(s)	1582, 1940
VpaK11BI	GGWCC	4 cut(s)	237, 404, 1023, 1493
XagI	CCTNNNNNAGG	1 cut(s)	2247
XapI	RAATTY	5 cut(s)	1210, 1268, 1277, 1512, 2729
XceI	RCATGY	7 cut(s)	342, 386, 1374, 1469, 1528, 1855, 2215
XhoI	CTCGAG	1 cut(s)	424
XmaJI	CCTAGG	1 cut(s)	1310
XmiI	GTMKAC	2 cut(s)	2478, 2514
XmnI	GAANNNNTTC	3 cut(s)	628, 886, 1797
XspI	CTAG	6 cut(s)	654, 879, 1311, 1506, 1824, 2003
ZraI	GACGTC	1 cut(s)	1697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.