RchiOBHm_Chr5g0028031

Ubiquitin carboxyl-terminal hydrolase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
21920922 .. 21928173
7252 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30754

Sequence Viewer

Length: 2832 bp
ATGCTTGAGCCAAGGGAAGCTGATATACCTGCCCTGTTCTTGGTTTTCGTTGTGCTTCCTTTGCTTGCTTATGTTTTACTTGGAAAATGGAGTGAGGCATCTAAGAAGAGAGAGAGGGTAAGTTTGCTTGCTCAACTCGCATCAGAAGAAGCTCTTAGAGCTGAAGCAATGGCTGTTCCTGACGTTATTCCTCCGGTTTCGTCTTCAAAGAATAATGTTCATGCATGTGCTAGATGCTCTAGGCCAGCCACAACCCGCTGCTCTAGATGCAAATCTGTCAGATATTGTTCTGGGAAGTGTCAAATAATGCATTGGAGGGAAGTTCACAGGCAAACATGCCTGCTGTTGGAACCTAGTAGTGCAACCTCATCTCCTATGGCTGTCTCATATGGAGAATCTTTTCATAATGACAGCATCAATTCTCAGTACTTTGGGTCTGCTATGGAGCAGATTTTGGGAGAGGAAGCACCAGCTGAAAATATGATTTATCCTCCAATTTACACTGGTATCCCGAATAAGGTTCAGTGCGCTTCAGTTGACCCCTCTCACATTTCCATGCTGGAGAAAAGAACTGTGGACAAGAAGGTTTCCCGAAAATCCAAAACCGAACTCTTGAGGAAAAAGGATGGAGTAACATTTGATCCTTCTGAAGAAACATTTGGTGATTGGACTACCCAATCAACCTTTTCTAATGTTGCATCAAGAGAGGTTTCTGTGGAGCATAAGCCAACAAATCTTGACTCTGTCCTGTCAGAGGCCGAAACTCTTAAGAAATACCATGCCAATATTTCTGATGCCTATATCAATGGACAAGCTACTTCAGGATATACAGTGCATGAGAATGATAAGTTTCAAGGTCAAGATGGTAACATATTTGAATCAAGAAGCAACTCTGGATTAACATGCGCATCATATTCTTCAAAAAGTGGAGCAGATTTGCATGAAGTGGGGTTGGACTTCGTTCCCGAGGGAGGACATTCCCTTCAAGGAGAAAAAACTTCCAATGATGAAAAGGCAGAGTTCAAATGTTCTGAAATTACTGCGGTAAAGGGAAGTGTAAAGGCTAAAAGAGCTCCATATTCTCTTGGGACGAAGGTGCCTAAATTGTCAAAATCAACAGTCAAGGACTCCGGGAAGCAGTATTGCTCTGAGATAGAGAGGCAGGGACAAATTACTGATGATTCAAAAGTAGCTAGAATGAGAGAGACGACTCCACAGGGAAGCAACGGAATGGCAAACATAAAGATTATGAAGATGATGGGTCTAAAGAAGCCAAAAAACATTACCAGACAGGATGTCCCTGAAGTCAGTGGTTATCGACACAAAACTAAGAAGGTCTTGTTTCCTTATGACGAGTTTGTTAAGTACTTTCAGAGTGAAGTCTTTGACTTAACACCTCGGGGCCTTTTAAATTGTGGGAACAGTTGCTATGCAAACGCTGTCTTGCAGTGCTTAACCTGCACGAAGCCACTCATTATCTATTTGCTTCGCAGATCACATTCGAGAGCCTGTTGTGGTAAAGATTGGTGTCTCATGTGTGAACTAGAGCAACATGTGATGATGTTACGGGAAAGTGGGGGTGCTCTTTCTCCTCGTCAGATTCTTTTTCACATGAGGAGTATTAATTGCCAAATCGGTGATGGAAGTCAGGAAGATGCGCATGAATTTTTAAGGCTTCTAGTAGCGTCAATGCAATCTATATGCTTGGAGGGGTTGGGTGGTGAAACCAAGGTTGATCCCAGATTACAAGAAACAACTTTTATACAACACACCTTTGGTGGGCATCTCAGATCCAAGGTCAAGTGTTTGGGATGTCATCATGAGTCTGAACGATATGAAAACATCATGGATCTTACATTAGAAATATATGGTTGGGTTGAGTCACTTGAAGATGCGCTGACTCAGTTTACGACACCTGAAGATTTGGATGGTGAAAACATGTATAGATGTGGAAGGTGTGCTGCATATGTTCGAGCCAGGAAGCAATTGAGCATACATGAGGCACCAAATATCCTGACAATTGTCTTGAAGAGGTTTCAGGAAGGAAAATATGGGAAAATAAACAAGTGCATCACGTTTCCAGACATGCTGGATATGATTCCATTTATGACTGGAACGGGCGACATTCCTCCACTTTACTTGCTCTATGCTGTTGTGGTGCATTTGGATACGCAAAATGCATCTTTCTCTGGACATTATGTGGCATATGTGAAAGATATGCGAGGCAACTGGTTCAGGATAGATGACACTGAGGTTCAGCCCGTGTCCATGAGCCAGGTTATGATGGAAGGGGCATATATTTTGTTCTATATGAGGTCTTGCCCTCGCCCTCAAAGAGCATTTGGTGGAAAAACTATCAGGCAGCAAGTTCCAAATCTTGAAAATGGTTCCTTGCCCAAAGCTCAGAGGCCAAAGCCAAGCCAAAGCATACCCAGCAGCCAATATGTTAGCCCAGAGCATTTACCTAATTTTATCAGGCCAGAAACTGCTAGTGGCTTTGGCTTTGCCAACAGCACCTGCAATGACATCCTTAGGAGTTCTAATGGGAATGTTTTCCGAACGGCGGAAACATATGTTGACCCCACCAGCATGGAATTCTCTGATGCTACATCTAGCGATTGGTCCCTTTTTACGAGTTCTGATGAGGCTTCTTTCACAACTGAGAGCACTAGAGACTCTTTCAGTACTGTTGATCATGCTGATGCTGGCAATATGGATCCAATCTCATCAATTTTCAACGTCTTGTATGCGCCAGAATATTCTCGCAGTTCTGTTGCCTGTAGAAAGATTTCAAATAGTAGGCCACACAGTAGCTTTGTTTCTCAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

943

Amino Acids

105.2

Weight (kDa)

6.8

Isoelectric Point (pI)

50.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-MYND PF01753 76 - 113 2.2e-09 MYND finger
UCH PF00443 467 - 770 1.5e-52 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 468 - 752 4e-20 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2525
Acc16I TGCGCA 2 cut(s) 907, 1659
Acc36I ACCTGC 3 cut(s) 37, 1466, 2525
AccB1I GGYRCC 2 cut(s) 1096, 2002
AciI CCGC 3 cut(s) 256, 1043, 2564
AclWI GGATC 6 cut(s) 635, 1730, 1785, 1857, 2711, 2724
AcsI RAATTY 2 cut(s) 1664, 2594
AcuI CTGAAG 6 cut(s) 183, 516, 669, 804, 1323, 1938
AfaI GTAC 3 cut(s) 428, 1367, 2686
AfiI CCNNNNNNNGG 7 cut(s) 40, 346, 517, 754, 971, 1779, 2563
AflII CTTAAG 1 cut(s) 767
AflIII ACRYGT 2 cut(s) 1552, 1938
AhdI GACNNNNNGTC 1 cut(s) 1295
AjnI CCWGG 2 cut(s) 1976, 2274
AjuI GAANNNNNNNTTGG 2 cut(s) 642, 674
AluBI AGCT 9 cut(s) 20, 152, 161, 473, 815, 1073, 1193, 2402, 2814
AluI AGCT 9 cut(s) 20, 152, 161, 473, 815, 1073, 1193, 2402, 2814
Alw21I GWGCWC 3 cut(s) 1075, 1585, 2669
Alw26I GTCTC 4 cut(s) 388, 1199, 1535, 2667
AlwI GGATC 6 cut(s) 635, 1730, 1785, 1857, 2711, 2724
AlwNI CAGNNNCTG 2 cut(s) 2486, 2517
Ama87I CYCGRG 2 cut(s) 965, 1398
AoxI GGCC 6 cut(s) 242, 756, 1402, 2408, 2477, 2801
ApeKI GCWGC 4 cut(s) 258, 1961, 2362, 2436
ApoI RAATTY 2 cut(s) 1664, 2594
AseI ATTAAT 1 cut(s) 1623
Asp700I GAANNNNTTC 3 cut(s) 399, 2552, 2788
AspLEI GCGC 5 cut(s) 530, 908, 1660, 1897, 2752
AspS9I GGNCC 2 cut(s) 1402, 2622
AsuC2I CCSGG 1 cut(s) 1132
AsuHPI GGTGA 4 cut(s) 674, 1649, 1733, 1943
AvaI CYCGRG 2 cut(s) 965, 1398
AvaII GGWCC 1 cut(s) 2622
AxyI CCTNAGG 1 cut(s) 2531
BaeI ACNNNNGTAYC 2 cut(s) 490, 523
BamHI GGATCC 1 cut(s) 2716
BanI GGYRCC 2 cut(s) 1096, 2002
BanII GRGCYC 1 cut(s) 1075
BarI GAAGNNNNNNTAC 2 cut(s) 9, 41
BbsI GAAGAC 1 cut(s) 195
Bbv12I GWGCWC 3 cut(s) 1075, 1585, 2669
BbvI GCAGC 4 cut(s) 245, 1948, 2374, 2448
BccI CCATC 6 cut(s) 620, 857, 1252, 1634, 1922, 2278
BceAI ACGGC 1 cut(s) 2577
BciT130I CCWGG 2 cut(s) 1978, 2276
BciVI GTATCC 2 cut(s) 518, 2161
BclI TGATCA 1 cut(s) 2692
BcnI CCSGG 1 cut(s) 1132
BcoDI GTCTC 4 cut(s) 388, 1199, 1535, 2667
BfmI CTRYAG 1 cut(s) 2779
BfrI CTTAAG 1 cut(s) 767
BfuAI ACCTGC 3 cut(s) 37, 1466, 2525
BfuI GTATCC 2 cut(s) 518, 2161
BisI GCNGC 4 cut(s) 259, 1962, 2363, 2437
BlsI GCNGC 4 cut(s) 260, 1963, 2364, 2438
BmcAI AGTACT 3 cut(s) 428, 1367, 2686
Bme1390I CCNGG 3 cut(s) 1132, 1978, 2276
Bme18I GGWCC 1 cut(s) 2622
BmeRI GACNNNNNGTC 1 cut(s) 1295
BmeT110I CYCGRG 2 cut(s) 965, 1398
BmgT120I GGNCC 2 cut(s) 1402, 2622
BmiI GGNNCC 7 cut(s) 351, 1098, 1403, 2004, 2389, 2624, 2718
BmrFI CCNGG 3 cut(s) 1132, 1978, 2276
BoxI GACNNNNGTC 1 cut(s) 2021
BpiI GAAGAC 1 cut(s) 195
BpmI CTGGAG 1 cut(s) 581
BpuEI CTTGAG 2 cut(s) 26, 634
BpuMI CCSGG 1 cut(s) 1132
BsaBI GATNNNNATC 1 cut(s) 271
BsaJI CCNNGG 5 cut(s) 11, 966, 1397, 1728, 1794
BsaWI WCCGGW 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 355, 385
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 346, 517, 754, 971, 1779, 2563
Bse1I ACTGG 3 cut(s) 508, 2116, 2234
Bse21I CCTNAGG 1 cut(s) 2531
Bse3DI GCAATG 2 cut(s) 174, 2527
Bse8I GATNNNNATC 1 cut(s) 271
BseBI CCWGG 2 cut(s) 1978, 2276
BseDI CCNNGG 5 cut(s) 11, 966, 1397, 1728, 1794
BseGI GGATG 5 cut(s) 631, 1300, 1817, 1933, 2526
BseJI GATNNNNATC 1 cut(s) 271
BseLI CCNNNNNNNGG 7 cut(s) 40, 346, 517, 754, 971, 1779, 2563
BseMI GCAATG 2 cut(s) 174, 2527
BseMII CTCAG 7 cut(s) 437, 1140, 1801, 1916, 2241, 2417, 2652
BseNI ACTGG 3 cut(s) 508, 2116, 2234
BseRI GAGGAG 2 cut(s) 1581, 1630
BseXI GCAGC 4 cut(s) 245, 1948, 2374, 2448
BseYI CCCAGC 1 cut(s) 2432
BsgI GTGCAG 1 cut(s) 1444
BshFI GGCC 6 cut(s) 244, 758, 1404, 2410, 2479, 2803
BshNI GGYRCC 2 cut(s) 1096, 2002
BsiHKAI GWGCWC 3 cut(s) 1075, 1585, 2669
BsiHKCI CYCGRG 2 cut(s) 965, 1398
BsiSI CCGG 2 cut(s) 194, 1131
BslFI GGGAC 4 cut(s) 1102, 1179, 1283, 2608
BslI CCNNNNNNNGG 7 cut(s) 40, 346, 517, 754, 971, 1779, 2563
BsmAI GTCTC 4 cut(s) 388, 1199, 1535, 2667
BsmBI CGTCTC 1 cut(s) 1199
BsmFI GGGAC 4 cut(s) 1102, 1179, 1283, 2608
BsnI GGCC 6 cut(s) 244, 758, 1404, 2410, 2479, 2803
BsoBI CYCGRG 2 cut(s) 965, 1398
Bsp1286I GDGCHC 3 cut(s) 1075, 1585, 2669
Bsp143I GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
BspACI CCGC 3 cut(s) 256, 1043, 2564
BspANI GGCC 6 cut(s) 244, 758, 1404, 2410, 2479, 2803
BspCNI CTCAG 7 cut(s) 436, 1141, 1800, 1915, 2242, 2416, 2653
BspHI TCATGA 1 cut(s) 1819
BspLI GGNNCC 7 cut(s) 351, 1098, 1403, 2004, 2389, 2624, 2718
BspMI ACCTGC 3 cut(s) 37, 1466, 2525
BspPI GGATC 6 cut(s) 635, 1730, 1785, 1857, 2711, 2724
BspT107I GGYRCC 2 cut(s) 1096, 2002
BspTI CTTAAG 1 cut(s) 767
BsrDI GCAATG 2 cut(s) 174, 2527
BsrI ACTGG 3 cut(s) 508, 2116, 2234
BssECI CCNNGG 5 cut(s) 11, 966, 1397, 1728, 1794
BssMI GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
BssT1I CCWWGG 3 cut(s) 11, 1728, 1794
Bst2UI CCWGG 2 cut(s) 1978, 2276
Bst4CI ACNGT 6 cut(s) 574, 832, 1120, 1424, 2689, 2810
Bst6I CTCTTC 2 cut(s) 101, 2024
BstAFI CTTAAG 1 cut(s) 767
BstC8I GCNNGC 5 cut(s) 66, 129, 246, 341, 2707
BstENI CCTNNNNNAGG 1 cut(s) 752
BstF5I GGATG 5 cut(s) 631, 1300, 1817, 1933, 2526
BstHHI GCGC 5 cut(s) 530, 908, 1660, 1897, 2752
BstKTI GATC 7 cut(s) 643, 1496, 1738, 1793, 1852, 2695, 2719
BstMAI GTCTC 4 cut(s) 388, 1199, 1535, 2667
BstMBI GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
BstMWI GCNNNNNNNGC 7 cut(s) 61, 137, 158, 267, 1070, 1458, 2433
BstNI CCWGG 2 cut(s) 1978, 2276
BstNSI RCATGY 6 cut(s) 228, 339, 906, 1556, 1942, 2089
BstPAI GACNNNNGTC 1 cut(s) 2021
BstSCI CCNGG 3 cut(s) 1130, 1976, 2274
BstSFI CTRYAG 1 cut(s) 2779
BstV1I GCAGC 4 cut(s) 245, 1948, 2374, 2448
BstV2I GAAGAC 1 cut(s) 195
BstX2I RGATCY 3 cut(s) 1790, 1849, 2716
BstXI CCANNNNNNTGG 1 cut(s) 2590
BstYI RGATCY 3 cut(s) 1790, 1849, 2716
Bsu36I CCTNAGG 1 cut(s) 2531
BsuI GTATCC 2 cut(s) 518, 2161
BsuRI GGCC 6 cut(s) 244, 758, 1404, 2410, 2479, 2803
BtsCI GGATG 5 cut(s) 631, 1300, 1817, 1933, 2526
BtsI GCAGTG 1 cut(s) 1454
BtsIMutI CAGTG 6 cut(s) 501, 530, 837, 1315, 1454, 2247
BveI ACCTGC 3 cut(s) 37, 1466, 2525
Cac8I GCNNGC 5 cut(s) 66, 129, 246, 341, 2707
CaiI CAGNNNCTG 2 cut(s) 2486, 2517
CciI TCATGA 1 cut(s) 1819
CfoI GCGC 5 cut(s) 530, 908, 1660, 1897, 2752
Cfr13I GGNCC 2 cut(s) 1402, 2622
CseI GACGC 1 cut(s) 1674
Csp6I GTAC 3 cut(s) 427, 1366, 2685
CspCI CAANNNNNGTGG 2 cut(s) 2121, 2156
CviQI GTAC 3 cut(s) 427, 1366, 2685
DpnI GATC 7 cut(s) 642, 1495, 1737, 1792, 1851, 2694, 2718
DpnII GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
DraI TTTAAA 1 cut(s) 1410
DriI GACNNNNNGTC 1 cut(s) 1295
Eam1104I CTCTTC 2 cut(s) 101, 2024
Eam1105I GACNNNNNGTC 1 cut(s) 1295
EarI CTCTTC 2 cut(s) 101, 2024
EciI GGCGGA 1 cut(s) 2579
Ecl136II GAGCTC 1 cut(s) 1073
Eco130I CCWWGG 3 cut(s) 11, 1728, 1794
Eco24I GRGCYC 1 cut(s) 1075
Eco47I GGWCC 1 cut(s) 2622
Eco53kI GAGCTC 1 cut(s) 1073
Eco57I CTGAAG 6 cut(s) 183, 516, 669, 804, 1323, 1938
Eco81I CCTNAGG 1 cut(s) 2531
Eco88I CYCGRG 2 cut(s) 965, 1398
EcoICRI GAGCTC 1 cut(s) 1073
EcoNI CCTNNNNNAGG 1 cut(s) 752
EcoO109I RGGNCCY 1 cut(s) 1402
EcoRI GAATTC 1 cut(s) 2594
EcoRII CCWGG 2 cut(s) 1976, 2274
EcoT14I CCWWGG 3 cut(s) 11, 1728, 1794
EcoT22I ATGCAT 3 cut(s) 226, 312, 2182
EcoT38I GRGCYC 1 cut(s) 1075
ErhI CCWWGG 3 cut(s) 11, 1728, 1794
Esp3I CGTCTC 1 cut(s) 1199
FalI AAGNNNNNCTT 4 cut(s) 138, 170, 1322, 1354
FaqI GGGAC 4 cut(s) 1102, 1179, 1283, 2608
FauI CCCGC 1 cut(s) 263
FauNDI CATATG 4 cut(s) 388, 1966, 2206, 2572
FbaI TGATCA 1 cut(s) 2692
Fnu4HI GCNGC 4 cut(s) 259, 1962, 2363, 2437
FokI GGATG 5 cut(s) 638, 1307, 1824, 1940, 2513
FriOI GRGCYC 1 cut(s) 1075
Fsp4HI GCNGC 4 cut(s) 259, 1962, 2363, 2437
FspAI RTGCGCAY 2 cut(s) 907, 1659
FspI TGCGCA 2 cut(s) 907, 1659
GlaI GCGC 5 cut(s) 529, 907, 1659, 1896, 2751
GluI GCNGC 4 cut(s) 259, 1962, 2363, 2437
GsaI CCCAGC 1 cut(s) 2436
GsuI CTGGAG 1 cut(s) 581
HaeIII GGCC 6 cut(s) 244, 758, 1404, 2410, 2479, 2803
HapII CCGG 2 cut(s) 194, 1131
HgaI GACGC 1 cut(s) 1674
HhaI GCGC 5 cut(s) 530, 908, 1660, 1897, 2752
Hin6I GCGC 5 cut(s) 528, 906, 1658, 1895, 2750
HinP1I GCGC 5 cut(s) 528, 906, 1658, 1895, 2750
HincII GTYRAC 2 cut(s) 538, 2578
HindII GTYRAC 2 cut(s) 538, 2578
HpaII CCGG 2 cut(s) 194, 1131
HphI GGTGA 4 cut(s) 674, 1649, 1733, 1943
Hpy166II GTNNAC 6 cut(s) 325, 538, 577, 1541, 1908, 2578
Hpy8I GTNNAC 6 cut(s) 325, 538, 577, 1541, 1908, 2578
HpyAV CCTTC 8 cut(s) 577, 654, 992, 1087, 1327, 1947, 2036, 2282
HpyCH4III ACNGT 6 cut(s) 574, 832, 1120, 1424, 2689, 2810
HpyCH4IV ACGT 3 cut(s) 183, 2075, 2739
HpyF10VI GCNNNNNNNGC 7 cut(s) 61, 137, 158, 267, 1070, 1458, 2433
HpySE526I ACGT 3 cut(s) 183, 2075, 2739
HspAI GCGC 5 cut(s) 528, 906, 1658, 1895, 2750
Ksp22I TGATCA 1 cut(s) 2692
Kzo9I GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
LmnI GCTCC 4 cut(s) 445, 718, 929, 1078
Lsp1109I GCAGC 4 cut(s) 245, 1948, 2374, 2448
MaeII ACGT 3 cut(s) 183, 2075, 2739
MaeIII GTNAC 4 cut(s) 631, 866, 1563, 1881
MalI GATC 7 cut(s) 642, 1495, 1737, 1792, 1851, 2694, 2718
MboI GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
MfeI CAATTG 2 cut(s) 1985, 2019
MflI RGATCY 3 cut(s) 1790, 1849, 2716
MhlI GDGCHC 3 cut(s) 1075, 1585, 2669
MlyI GAGTC 7 cut(s) 734, 1121, 1204, 1832, 1889, 1894, 2669
MmeI TCCRAC 2 cut(s) 327, 933
Mph1103I ATGCAT 3 cut(s) 226, 312, 2182
MroXI GAANNNNTTC 3 cut(s) 399, 2552, 2788
MseI TTAA 8 cut(s) 768, 899, 1362, 1391, 1409, 1454, 1623, 1670
MslI CAYNNNNRTG 5 cut(s) 225, 554, 840, 2588, 2700
MspA1I CMGCKG 2 cut(s) 258, 473
MspCI CTTAAG 1 cut(s) 767
MspI CCGG 2 cut(s) 194, 1131
MspR9I CCNGG 3 cut(s) 1132, 1978, 2276
MunI CAATTG 2 cut(s) 1985, 2019
MvaI CCWGG 2 cut(s) 1978, 2276
MwoI GCNNNNNNNGC 7 cut(s) 61, 137, 158, 267, 1070, 1458, 2433
NciI CCSGG 1 cut(s) 1132
NdeI CATATG 4 cut(s) 388, 1966, 2206, 2572
NdeII GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
NlaIV GGNNCC 7 cut(s) 351, 1098, 1403, 2004, 2389, 2624, 2718
NmuCI GTSAC 1 cut(s) 1881
NsbI TGCGCA 2 cut(s) 907, 1659
NsiI ATGCAT 3 cut(s) 226, 312, 2182
NspI RCATGY 6 cut(s) 228, 339, 906, 1556, 1942, 2089
PagI TCATGA 1 cut(s) 1819
PaqCI CACCTGC 1 cut(s) 2525
PciI ACATGT 2 cut(s) 1552, 1938
PdmI GAANNNNTTC 3 cut(s) 399, 2552, 2788
PfeI GAWTC 5 cut(s) 395, 878, 1181, 1600, 2098
PflFI GACNNNGTC 1 cut(s) 743
PfoI TCCNGGA 1 cut(s) 1130
PkrI GCNGC 4 cut(s) 260, 1963, 2364, 2438
PleI GAGTC 7 cut(s) 734, 1121, 1204, 1831, 1888, 1894, 2669
PpsI GAGTC 7 cut(s) 734, 1121, 1204, 1831, 1888, 1894, 2669
PscI ACATGT 2 cut(s) 1552, 1938
PshAI GACNNNNGTC 1 cut(s) 2021
PshBI ATTAAT 1 cut(s) 1623
Psp124BI GAGCTC 1 cut(s) 1075
Psp6I CCWGG 2 cut(s) 1976, 2274
PspFI CCCAGC 1 cut(s) 2432
PspGI CCWGG 2 cut(s) 1976, 2274
PspN4I GGNNCC 7 cut(s) 351, 1098, 1403, 2004, 2389, 2624, 2718
PspPI GGNCC 2 cut(s) 1402, 2622
PstNI CAGNNNCTG 2 cut(s) 2486, 2517
PsuI RGATCY 3 cut(s) 1790, 1849, 2716
PsyI GACNNNGTC 1 cut(s) 743
PvuII CAGCTG 1 cut(s) 473
RsaI GTAC 3 cut(s) 428, 1367, 2686
RsaNI GTAC 3 cut(s) 427, 1366, 2685
RseI CAYNNNNRTG 5 cut(s) 225, 554, 840, 2588, 2700
SacI GAGCTC 1 cut(s) 1075
SaqAI TTAA 8 cut(s) 768, 899, 1362, 1391, 1409, 1454, 1623, 1670
SatI GCNGC 4 cut(s) 259, 1962, 2363, 2437
Sau3AI GATC 7 cut(s) 640, 1493, 1735, 1790, 1849, 2692, 2716
Sau96I GGNCC 2 cut(s) 1402, 2622
ScaI AGTACT 3 cut(s) 428, 1367, 2686
SchI GAGTC 7 cut(s) 734, 1121, 1204, 1832, 1889, 1894, 2669
ScrFI CCNGG 3 cut(s) 1132, 1978, 2276
SduI GDGCHC 3 cut(s) 1075, 1585, 2669
SfcI CTRYAG 1 cut(s) 2779
SinI GGWCC 1 cut(s) 2622
SmiMI CAYNNNNRTG 5 cut(s) 225, 554, 840, 2588, 2700
SmlI CTYRAG 3 cut(s) 5, 613, 767
SmoI CTYRAG 3 cut(s) 5, 613, 767
SsiI CCGC 3 cut(s) 256, 1043, 2564
SspI AATATT 2 cut(s) 787, 2759
SstI GAGCTC 1 cut(s) 1075
StyD4I CCNGG 3 cut(s) 1130, 1976, 2274
StyI CCWWGG 3 cut(s) 11, 1728, 1794
TaaI ACNGT 6 cut(s) 574, 832, 1120, 1424, 2689, 2810
TaiI ACGT 3 cut(s) 186, 2078, 2742
TaqI TCGA 3 cut(s) 1318, 1502, 1972
TatI WGTACW 3 cut(s) 426, 1365, 2684
TfiI GAWTC 5 cut(s) 395, 878, 1181, 1600, 2098
Tru1I TTAA 8 cut(s) 768, 899, 1362, 1391, 1409, 1454, 1623, 1670
Tru9I TTAA 8 cut(s) 768, 899, 1362, 1391, 1409, 1454, 1623, 1670
TscAI CASTG 6 cut(s) 508, 530, 837, 1315, 1454, 2254
TseFI GTSAC 1 cut(s) 1881
TseI GCWGC 4 cut(s) 258, 1961, 2362, 2436
Tsp45I GTSAC 1 cut(s) 1881
TspDTI ATGAA 7 cut(s) 209, 392, 957, 1023, 1265, 1677, 1851
TspGWI ACGGA 1 cut(s) 1242
TspRI CASTG 6 cut(s) 508, 530, 837, 1315, 1454, 2254
Tth111I GACNNNGTC 1 cut(s) 743
Vha464I CTTAAG 1 cut(s) 767
VpaK11BI GGWCC 1 cut(s) 2622
VspI ATTAAT 1 cut(s) 1623
XagI CCTNNNNNAGG 1 cut(s) 752
XapI RAATTY 2 cut(s) 1664, 2594
XbaI TCTAGA 1 cut(s) 263
XceI RCATGY 6 cut(s) 228, 339, 906, 1556, 1942, 2089
XcmI CCANNNNNNNNNTGG 1 cut(s) 1637
XmnI GAANNNNTTC 3 cut(s) 399, 2552, 2788
ZrmI AGTACT 3 cut(s) 428, 1367, 2686
Zsp2I ATGCAT 3 cut(s) 226, 312, 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.