Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17110 AT1G17110 AT1G17110 |
| fragaria_vesca | FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 |
| malus_domestica | MD05G1206800.v1.1 MD10G1193900.v1.1 |
| prunus_persica | Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 |
| pyrus_communis | pycom05g19290 pycom10g16770 |
| rosa_chinensis | RchiOBHm_Chr5g0028031 |
| rosa_laevigata | RLG00000033059 |
| rosa_multiflora | Rmu_sc0009432.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00051630 |
| rosa_rugosa | Rorug05G0103600 |
| rosa_samantha | Rh5AG197200 Rh5BG195400 Rh5CG215600 Rh5DG197000 |
| rosa_wichuraiana | Rw5G017980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 37 |
| AccB1I | GGYRCC | 2 cut(s) | 1099, 2005 |
| AccBSI | CCGCTC | 1 cut(s) | 115 |
| AccIII | TCCGGA | 1 cut(s) | 2083 |
| AciI | CCGC | 3 cut(s) | 115, 256, 2319 |
| AclI | AACGTT | 1 cut(s) | 693 |
| AclWI | GGATC | 4 cut(s) | 635, 1733, 1788, 1860 |
| AcsI | RAATTY | 2 cut(s) | 1667, 1866 |
| AcuI | CTGAAG | 6 cut(s) | 516, 669, 788, 804, 1326, 1941 |
| AfaI | GTAC | 3 cut(s) | 428, 834, 1370 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 517, 1782 |
| AflIII | ACRYGT | 1 cut(s) | 1555 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1298 |
| AhlI | ACTAGT | 1 cut(s) | 1681 |
| AjnI | CCWGG | 1 cut(s) | 1979 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 642, 674 |
| AluBI | AGCT | 6 cut(s) | 20, 152, 906, 1076, 1196, 2280 |
| AluI | AGCT | 6 cut(s) | 20, 152, 906, 1076, 1196, 2280 |
| Alw21I | GWGCWC | 2 cut(s) | 1078, 1588 |
| Alw26I | GTCTC | 3 cut(s) | 388, 1202, 1538 |
| AlwI | GGATC | 4 cut(s) | 635, 1733, 1788, 1860 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 758 |
| Ama87I | CYCGRG | 2 cut(s) | 1088, 1401 |
| Aor13HI | TCCGGA | 1 cut(s) | 2083 |
| ApeKI | GCWGC | 3 cut(s) | 258, 1043, 1964 |
| ApoI | RAATTY | 2 cut(s) | 1667, 1866 |
| AseI | ATTAAT | 3 cut(s) | 417, 804, 1626 |
| AspLEI | GCGC | 2 cut(s) | 530, 1900 |
| AspS9I | GGNCC | 1 cut(s) | 1339 |
| AsuHPI | GGTGA | 7 cut(s) | 130, 674, 1652, 1736, 1946, 2135, 2285 |
| AvaI | CYCGRG | 2 cut(s) | 1088, 1401 |
| AvaII | GGWCC | 1 cut(s) | 1339 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 490, 523 |
| BanI | GGYRCC | 2 cut(s) | 1099, 2005 |
| BanII | GRGCYC | 1 cut(s) | 1078 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 9, 41 |
| Bbv12I | GWGCWC | 2 cut(s) | 1078, 1588 |
| BbvI | GCAGC | 3 cut(s) | 245, 1030, 1951 |
| BccI | CCATC | 6 cut(s) | 620, 736, 857, 1255, 1637, 1925 |
| BciT130I | CCWGG | 1 cut(s) | 1981 |
| BciVI | GTATCC | 2 cut(s) | 518, 2164 |
| BcoDI | GTCTC | 3 cut(s) | 388, 1202, 1538 |
| BcuI | ACTAGT | 1 cut(s) | 1681 |
| BfaI | CTAG | 8 cut(s) | 231, 240, 264, 354, 903, 1197, 1547, 1682 |
| BfmI | CTRYAG | 1 cut(s) | 1044 |
| BfuAI | ACCTGC | 1 cut(s) | 37 |
| BfuI | GTATCC | 2 cut(s) | 518, 2164 |
| BisI | GCNGC | 3 cut(s) | 259, 1044, 1965 |
| BlsI | GCNGC | 3 cut(s) | 260, 1045, 1966 |
| BmcAI | AGTACT | 3 cut(s) | 428, 834, 1370 |
| Bme1390I | CCNGG | 1 cut(s) | 1981 |
| Bme18I | GGWCC | 1 cut(s) | 1339 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1298 |
| BmeT110I | CYCGRG | 2 cut(s) | 1088, 1401 |
| BmgT120I | GGNCC | 1 cut(s) | 1339 |
| BmiI | GGNNCC | 3 cut(s) | 351, 1101, 2007 |
| BmrFI | CCNGG | 1 cut(s) | 1981 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2024 |
| BpmI | CTGGAG | 1 cut(s) | 581 |
| BpuEI | CTTGAG | 3 cut(s) | 26, 634, 857 |
| BsaBI | GATNNNNATC | 1 cut(s) | 271 |
| BsaJI | CCNNGG | 5 cut(s) | 11, 969, 1005, 1400, 1797 |
| BsaWI | WCCGGW | 3 cut(s) | 193, 2083, 2114 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 355, 385, 924, 954 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 517, 1782 |
| Bse1I | ACTGG | 3 cut(s) | 508, 2237, 2322 |
| Bse3DI | GCAATG | 2 cut(s) | 174, 1234 |
| Bse8I | GATNNNNATC | 1 cut(s) | 271 |
| BseAI | TCCGGA | 1 cut(s) | 2083 |
| BseBI | CCWGG | 1 cut(s) | 1981 |
| BseDI | CCNNGG | 5 cut(s) | 11, 969, 1005, 1400, 1797 |
| BseGI | GGATG | 2 cut(s) | 631, 1015 |
| BseJI | GATNNNNATC | 1 cut(s) | 271 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 517, 1782 |
| BseMI | GCAATG | 2 cut(s) | 174, 1234 |
| BseMII | CTCAG | 4 cut(s) | 1143, 1804, 1919, 2244 |
| BseNI | ACTGG | 3 cut(s) | 508, 2237, 2322 |
| BseRI | GAGGAG | 2 cut(s) | 1584, 1633 |
| BseXI | GCAGC | 3 cut(s) | 245, 1030, 1951 |
| BsgI | GTGCAG | 1 cut(s) | 15 |
| BshNI | GGYRCC | 2 cut(s) | 1099, 2005 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1078, 1588 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1088, 1401 |
| BsiSI | CCGG | 3 cut(s) | 194, 2084, 2115 |
| BslFI | GGGAC | 2 cut(s) | 1105, 1286 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 517, 1782 |
| BsmAI | GTCTC | 3 cut(s) | 388, 1202, 1538 |
| BsmFI | GGGAC | 2 cut(s) | 1105, 1286 |
| BsoBI | CYCGRG | 2 cut(s) | 1088, 1401 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1078, 1588 |
| Bsp13I | TCCGGA | 1 cut(s) | 2083 |
| Bsp143I | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| BspACI | CCGC | 3 cut(s) | 115, 256, 2319 |
| BspCNI | CTCAG | 4 cut(s) | 1144, 1803, 1918, 2245 |
| BspEI | TCCGGA | 1 cut(s) | 2083 |
| BspHI | TCATGA | 3 cut(s) | 1663, 1822, 2109 |
| BspLI | GGNNCC | 3 cut(s) | 351, 1101, 2007 |
| BspMAI | CTGCAG | 1 cut(s) | 1048 |
| BspMI | ACCTGC | 1 cut(s) | 37 |
| BspPI | GGATC | 4 cut(s) | 635, 1733, 1788, 1860 |
| BspT107I | GGYRCC | 2 cut(s) | 1099, 2005 |
| BsrBI | CCGCTC | 1 cut(s) | 115 |
| BsrDI | GCAATG | 2 cut(s) | 174, 1234 |
| BsrI | ACTGG | 3 cut(s) | 508, 2237, 2322 |
| BssECI | CCNNGG | 5 cut(s) | 11, 969, 1005, 1400, 1797 |
| BssMI | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| BssT1I | CCWWGG | 3 cut(s) | 11, 1005, 1797 |
| Bst2UI | CCWGG | 1 cut(s) | 1981 |
| Bst4CI | ACNGT | 6 cut(s) | 36, 426, 574, 832, 1123, 1427 |
| Bst6I | CTCTTC | 3 cut(s) | 101, 990, 2027 |
| BstC8I | GCNNGC | 3 cut(s) | 66, 129, 341 |
| BstDEI | CTNAG | 6 cut(s) | 102, 1152, 1332, 1790, 1905, 2253 |
| BstF5I | GGATG | 2 cut(s) | 631, 1015 |
| BstHHI | GCGC | 2 cut(s) | 530, 1900 |
| BstKTI | GATC | 5 cut(s) | 643, 1499, 1741, 1796, 1855 |
| BstMAI | GTCTC | 3 cut(s) | 388, 1202, 1538 |
| BstMBI | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 61, 137, 158, 267, 1073, 1461 |
| BstNI | CCWGG | 1 cut(s) | 1981 |
| BstNSI | RCATGY | 6 cut(s) | 228, 339, 343, 1559, 2224, 2309 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2024 |
| BstSCI | CCNGG | 1 cut(s) | 1979 |
| BstSFI | CTRYAG | 1 cut(s) | 1044 |
| BstV1I | GCAGC | 3 cut(s) | 245, 1030, 1951 |
| BstX2I | RGATCY | 2 cut(s) | 1793, 1852 |
| BstYI | RGATCY | 2 cut(s) | 1793, 1852 |
| BsuI | GTATCC | 2 cut(s) | 518, 2164 |
| BtsCI | GGATG | 2 cut(s) | 631, 1015 |
| BtsI | GCAGTG | 1 cut(s) | 1457 |
| BtsIMutI | CAGTG | 6 cut(s) | 32, 501, 530, 1318, 1457, 2250 |
| BveI | ACCTGC | 1 cut(s) | 37 |
| Cac8I | GCNNGC | 3 cut(s) | 66, 129, 341 |
| CaiI | CAGNNNCTG | 1 cut(s) | 758 |
| CciI | TCATGA | 3 cut(s) | 1663, 1822, 2109 |
| CfoI | GCGC | 2 cut(s) | 530, 1900 |
| Cfr13I | GGNCC | 1 cut(s) | 1339 |
| Csp6I | GTAC | 3 cut(s) | 427, 833, 1369 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 156, 191, 2124, 2159 |
| CviQI | GTAC | 3 cut(s) | 427, 833, 1369 |
| DdeI | CTNAG | 6 cut(s) | 102, 1152, 1332, 1790, 1905, 2253 |
| DpnI | GATC | 5 cut(s) | 642, 1498, 1740, 1795, 1854 |
| DpnII | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| DraI | TTTAAA | 2 cut(s) | 1413, 2289 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1298 |
| Eam1104I | CTCTTC | 3 cut(s) | 101, 990, 2027 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1298 |
| EarI | CTCTTC | 3 cut(s) | 101, 990, 2027 |
| EciI | GGCGGA | 1 cut(s) | 2308 |
| Ecl136II | GAGCTC | 1 cut(s) | 1076 |
| Eco130I | CCWWGG | 3 cut(s) | 11, 1005, 1797 |
| Eco24I | GRGCYC | 1 cut(s) | 1078 |
| Eco47I | GGWCC | 1 cut(s) | 1339 |
| Eco53kI | GAGCTC | 1 cut(s) | 1076 |
| Eco57I | CTGAAG | 6 cut(s) | 516, 669, 788, 804, 1326, 1941 |
| Eco88I | CYCGRG | 2 cut(s) | 1088, 1401 |
| EcoICRI | GAGCTC | 1 cut(s) | 1076 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1339 |
| EcoRII | CCWGG | 1 cut(s) | 1979 |
| EcoT14I | CCWWGG | 3 cut(s) | 11, 1005, 1797 |
| EcoT22I | ATGCAT | 4 cut(s) | 100, 226, 312, 341 |
| EcoT38I | GRGCYC | 1 cut(s) | 1078 |
| ErhI | CCWWGG | 3 cut(s) | 11, 1005, 1797 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2269, 2301 |
| FaqI | GGGAC | 2 cut(s) | 1105, 1286 |
| FauI | CCCGC | 2 cut(s) | 108, 263 |
| FauNDI | CATATG | 3 cut(s) | 388, 1969, 2209 |
| Fnu4HI | GCNGC | 3 cut(s) | 259, 1044, 1965 |
| FokI | GGATG | 2 cut(s) | 638, 1022 |
| FriOI | GRGCYC | 1 cut(s) | 1078 |
| Fsp4HI | GCNGC | 3 cut(s) | 259, 1044, 1965 |
| FspBI | CTAG | 8 cut(s) | 231, 240, 264, 354, 903, 1197, 1547, 1682 |
| GlaI | GCGC | 2 cut(s) | 529, 1899 |
| GluI | GCNGC | 3 cut(s) | 259, 1044, 1965 |
| GsuI | CTGGAG | 1 cut(s) | 581 |
| HapII | CCGG | 3 cut(s) | 194, 2084, 2115 |
| HhaI | GCGC | 2 cut(s) | 530, 1900 |
| Hin6I | GCGC | 2 cut(s) | 528, 1898 |
| HinP1I | GCGC | 2 cut(s) | 528, 1898 |
| HincII | GTYRAC | 1 cut(s) | 538 |
| HindII | GTYRAC | 1 cut(s) | 538 |
| HindIII | AAGCTT | 1 cut(s) | 150 |
| HpaII | CCGG | 3 cut(s) | 194, 2084, 2115 |
| HphI | GGTGA | 7 cut(s) | 130, 674, 1652, 1736, 1946, 2135, 2285 |
| Hpy166II | GTNNAC | 5 cut(s) | 325, 538, 577, 1544, 1911 |
| Hpy8I | GTNNAC | 5 cut(s) | 325, 538, 577, 1544, 1911 |
| HpyAV | CCTTC | 6 cut(s) | 577, 654, 1057, 1330, 1950, 2039 |
| HpyCH4III | ACNGT | 6 cut(s) | 36, 426, 574, 832, 1123, 1427 |
| HpyCH4IV | ACGT | 1 cut(s) | 693 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 61, 137, 158, 267, 1073, 1461 |
| HpyF3I | CTNAG | 6 cut(s) | 102, 1152, 1332, 1790, 1905, 2253 |
| HpySE526I | ACGT | 1 cut(s) | 693 |
| HspAI | GCGC | 2 cut(s) | 528, 1898 |
| Kpn2I | TCCGGA | 1 cut(s) | 2083 |
| Kzo9I | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| LmnI | GCTCC | 4 cut(s) | 445, 718, 1081, 2285 |
| Lsp1109I | GCAGC | 3 cut(s) | 245, 1030, 1951 |
| MaeI | CTAG | 8 cut(s) | 231, 240, 264, 354, 903, 1197, 1547, 1682 |
| MaeII | ACGT | 1 cut(s) | 693 |
| MaeIII | GTNAC | 6 cut(s) | 866, 1421, 1558, 1566, 1884, 2123 |
| MalI | GATC | 5 cut(s) | 642, 1498, 1740, 1795, 1854 |
| MbiI | CCGCTC | 1 cut(s) | 115 |
| MboI | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| MfeI | CAATTG | 2 cut(s) | 1988, 2022 |
| MflI | RGATCY | 2 cut(s) | 1793, 1852 |
| MhlI | GDGCHC | 2 cut(s) | 1078, 1588 |
| MlyI | GAGTC | 4 cut(s) | 1124, 1835, 1892, 1897 |
| MmeI | TCCRAC | 2 cut(s) | 327, 936 |
| Mph1103I | ATGCAT | 4 cut(s) | 100, 226, 312, 341 |
| MroI | TCCGGA | 1 cut(s) | 2083 |
| MslI | CAYNNNNRTG | 2 cut(s) | 225, 554 |
| MspA1I | CMGCKG | 1 cut(s) | 258 |
| MspI | CCGG | 3 cut(s) | 194, 2084, 2115 |
| MspR9I | CCNGG | 1 cut(s) | 1981 |
| MunI | CAATTG | 2 cut(s) | 1988, 2022 |
| MvaI | CCWGG | 1 cut(s) | 1981 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 61, 137, 158, 267, 1073, 1461 |
| NdeI | CATATG | 3 cut(s) | 388, 1969, 2209 |
| NdeII | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| NlaIV | GGNNCC | 3 cut(s) | 351, 1101, 2007 |
| NmuCI | GTSAC | 3 cut(s) | 1558, 1884, 2123 |
| NsiI | ATGCAT | 4 cut(s) | 100, 226, 312, 341 |
| NspI | RCATGY | 6 cut(s) | 228, 339, 343, 1559, 2224, 2309 |
| PaeI | GCATGC | 1 cut(s) | 343 |
| PagI | TCATGA | 3 cut(s) | 1663, 1822, 2109 |
| PciI | ACATGT | 1 cut(s) | 1555 |
| PfeI | GAWTC | 7 cut(s) | 395, 740, 878, 1184, 1603, 1786, 2101 |
| PkrI | GCNGC | 3 cut(s) | 260, 1045, 1966 |
| PleI | GAGTC | 4 cut(s) | 1124, 1834, 1891, 1897 |
| PpsI | GAGTC | 4 cut(s) | 1124, 1834, 1891, 1897 |
| PpuMI | RGGWCCY | 1 cut(s) | 1339 |
| PscI | ACATGT | 1 cut(s) | 1555 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2024 |
| PshBI | ATTAAT | 3 cut(s) | 417, 804, 1626 |
| Psp124BI | GAGCTC | 1 cut(s) | 1078 |
| Psp1406I | AACGTT | 1 cut(s) | 693 |
| Psp5II | RGGWCCY | 1 cut(s) | 1339 |
| Psp6I | CCWGG | 1 cut(s) | 1979 |
| PspGI | CCWGG | 1 cut(s) | 1979 |
| PspN4I | GGNNCC | 3 cut(s) | 351, 1101, 2007 |
| PspPI | GGNCC | 1 cut(s) | 1339 |
| PspPPI | RGGWCCY | 1 cut(s) | 1339 |
| PstI | CTGCAG | 1 cut(s) | 1048 |
| PstNI | CAGNNNCTG | 1 cut(s) | 758 |
| PsuI | RGATCY | 2 cut(s) | 1793, 1852 |
| RsaI | GTAC | 3 cut(s) | 428, 834, 1370 |
| RsaNI | GTAC | 3 cut(s) | 427, 833, 1369 |
| RseI | CAYNNNNRTG | 2 cut(s) | 225, 554 |
| SacI | GAGCTC | 1 cut(s) | 1078 |
| SatI | GCNGC | 3 cut(s) | 259, 1044, 1965 |
| Sau3AI | GATC | 5 cut(s) | 640, 1496, 1738, 1793, 1852 |
| Sau96I | GGNCC | 1 cut(s) | 1339 |
| ScaI | AGTACT | 3 cut(s) | 428, 834, 1370 |
| SchI | GAGTC | 4 cut(s) | 1124, 1835, 1892, 1897 |
| ScrFI | CCNGG | 1 cut(s) | 1981 |
| SduI | GDGCHC | 2 cut(s) | 1078, 1588 |
| SfcI | CTRYAG | 1 cut(s) | 1044 |
| SinI | GGWCC | 1 cut(s) | 1339 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 225, 554 |
| SmlI | CTYRAG | 3 cut(s) | 5, 613, 836 |
| SmoI | CTYRAG | 3 cut(s) | 5, 613, 836 |
| SpeI | ACTAGT | 1 cut(s) | 1681 |
| SphI | GCATGC | 1 cut(s) | 343 |
| SsiI | CCGC | 3 cut(s) | 115, 256, 2319 |
| SspMI | CTAG | 8 cut(s) | 231, 240, 264, 354, 903, 1197, 1547, 1682 |
| SstI | GAGCTC | 1 cut(s) | 1078 |
| StyD4I | CCNGG | 1 cut(s) | 1979 |
| StyI | CCWWGG | 3 cut(s) | 11, 1005, 1797 |
| TaaI | ACNGT | 6 cut(s) | 36, 426, 574, 832, 1123, 1427 |
| TaiI | ACGT | 1 cut(s) | 696 |
| TaqI | TCGA | 3 cut(s) | 1321, 1505, 1975 |
| TatI | WGTACW | 3 cut(s) | 426, 832, 1368 |
| TfiI | GAWTC | 7 cut(s) | 395, 740, 878, 1184, 1603, 1786, 2101 |
| TscAI | CASTG | 6 cut(s) | 39, 508, 530, 1318, 1457, 2257 |
| TseFI | GTSAC | 3 cut(s) | 1558, 1884, 2123 |
| TseI | GCWGC | 3 cut(s) | 258, 1043, 1964 |
| Tsp45I | GTSAC | 3 cut(s) | 1558, 1884, 2123 |
| TspRI | CASTG | 6 cut(s) | 39, 508, 530, 1318, 1457, 2257 |
| VpaK11BI | GGWCC | 1 cut(s) | 1339 |
| VspI | ATTAAT | 3 cut(s) | 417, 804, 1626 |
| XapI | RAATTY | 2 cut(s) | 1667, 1866 |
| XbaI | TCTAGA | 1 cut(s) | 263 |
| XceI | RCATGY | 6 cut(s) | 228, 339, 343, 1559, 2224, 2309 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1640 |
| XspI | CTAG | 8 cut(s) | 231, 240, 264, 354, 903, 1197, 1547, 1682 |
| ZrmI | AGTACT | 3 cut(s) | 428, 834, 1370 |
| Zsp2I | ATGCAT | 4 cut(s) | 100, 226, 312, 341 |