Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005444

Physical Location & Seq

Genomic Coordinates Forward (+)

21969736 .. 21978779

Gene Structure 9044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG197000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGCTTGAGCCAAGGGAAGCTGATATACCTGCCCTGTTCTTGGTTTTCGTTGTGCTTCCTTTGCTTGCTTATGTTTTACTTGGAAAATGGAGTGAGGCATCTAAGAAGAGAGAGAGGGTAAGTTTGCTTGCTCAACTCGCATCAGAAGAAGCTCTTAGAGCTGAAGCAATGGCTGTTCCTGACGTTATTCCTCCGGTTTCGTCTTCAAAGAATAATGTTCATGCATGTGCTAGATGCTCTAGGCCAGCCACAACCCGCTGCTCTAGATGCAAATCTGTCAGATATTGTTCTGGGAAGTGTCAAATAATGCATTGGAGGGAAGTTCACAGGCAAACATGCCTGCTGTTGGAACCTAGTAGTGCAACCTCATCTCCTATGGCTGTCTCATATGGAGAATCTTTTCATAATGACAGCATCAATTCTCAGTACTTTGGGTCTGCTATGGAGCAGATTTTGGGAGAGGAAGCACCAGCTGAAAATATGATTTATCCTCCAATTTACACTGGTATCCCGAATAAGGTTCAGTGCGCTTCAGTTGACCCCTCTCACATTTCCATGCTGGAGAAAAGAACTGTGGACAAGAAGGTTTCCCGAAAATCCAAAACCGAACTCTTGAGGAAAAAGGATGGAGTAACATTTGATCCTTCTGAAGAAACATTTGGTGATTGGACTACCCAATCAACCTTTTCTAATGTTGCATCAAGAGAGGTTTCTGTGGAGCATAAGCCAACAAATCTTGACTCTGTCCTGTCAGAGGCCGAAACTCTTAAGAAATACCATGCCAATATTTCTGATGCCTATATCAATGGACAAGCTACTTCAGGATATACAGTGCATGAGAATGATAAGTTTCAAGGTCAAGATGGTAACATATTTGAATCAAGAAGCAACTCTGGATTAACATGCGCATCATATTCTTCAAAAAGTGGAGCAGATTTGCATGAAGTGGGGTTGGACTTCGTTCCCGAGGGAGGACATTCCCTTCAAGGAGAAAAAACTTCCAATGATGAAAAGGCAGAGTTCAAATGTTCTGAAATTACTGCGGTAAAGGGAAGTGTAAAGGCTAAAAGAGCTCCATATTCTCTTGGGACGAAGGTGCCTAAATTGTCAAAATCAACAGTCAAGGACTCCGGGAAGCAGTATTGCTCTGAGATAGAGAGGCAGGGACAAATTACTGATGATTCAAAAGTAGCTAGAATGAGAGAGACGACTCCACAGGGAAGCAACGGAATGGCAAACATAAAGATTATGAAGATGATGGGTCTAAAGAAGCCAAAAAACATTACCAGACAGGATGTCCCTGAAGTCAGTGGTTATCGACACAAAACTAAGAAGGTCTTGTTTCCTTATGACGAGTTTGTTAAGTACTTTCAGAGTGAAGTCTTTGACTTAACACCTCGGGGCCTTTTAAATTGTGGGAACAGTTGCTATGCAAACGCTGTCTTGCAGTGCTTAACCTGCACGAAGCCACTCATTATCTATTTGCTTCGCAGATCACATTCGAGAGCCTGTTGTGGTAAAGATTGGTGTCTCATGTGTGAACTAGAGCAACATGTGATGATGTTACGGGAAAGTGGGGGTGCTCTTTCTCCTCGTCAGATTCTTTTTCACATGAGGAGTATTAATTGCCAAATCGGTGATGGAAGTCAGGAAGATGCGCATGAATTTTTAAGGCTTCTAGTAGCGTCAATGCAATCTATATGCTTGGAGGGGTTGGGTGGTGAAACCAAGGTTGATCCCAGATTACAAGAAACAACTTTTATACAACACACCTTTGGTGGGCATCTCAGATCCAAGGTCAAGTGTTTGGGATGTCATCATGAGTCTGAACGATATGAAAACATCATGGATCTTACATTAGAAATATATGGTTGGGTTGAGTCACTTGAAGATGCGCTGACTCAGTTTACGACACCTGAAGATTTGGATGGTGAAAACATGTATAGATGTGGAAGGTGTGCTGCATATGTTCGAGCCAGGAAGCAATTGAGCATACATGAGGCACCAAATATCCTGACAATTGTCTTGAAGAGGTTTCAGGAAGGAAAATATGGGAAAATAAACAAGTGCATCACGTTTCCAGACATGCTGGATATGATTCCATTTATGACTGGAACGGGCGACATTCCTCCACTTTACTTGCTCTATGCTGTTGTGGTGCATTTGGATACGCAAAATGCATCTTTCTCTGGACATTATGTGGCATATGTGAAAGATATGCGAGGCAACTGGTTCAGGATAGATGACACTGAGGTAAATGCTTCCTCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

757

Amino Acids

84.62

Weight (kDa)

7.26

Isoelectric Point (pI)

46.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	76 - 113	1.7e-09	MYND finger
UCH	PF00443	467 - 755	3.5e-47	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	468 - 752	3e-20	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17110 AT1G17110 AT1G17110
fragaria_vesca	FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820
malus_domestica	MD05G1206800.v1.1 MD10G1193900.v1.1
prunus_persica	Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1
pyrus_communis	pycom05g19290 pycom10g16770
rosa_chinensis	RchiOBHm_Chr5g0028031
rosa_laevigata	RLG00000033059
rosa_multiflora	Rmu_sc0009432.1_g000009
rosa_roxburghii	Rroxscaffold_1G00051630
rosa_rugosa	Rorug05G0103600
rosa_samantha	Rh5AG197200 Rh5BG195400 Rh5CG215600 Rh5DG197000
rosa_wichuraiana	Rw5G017980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	907, 1659
Acc36I	ACCTGC	2 cut(s)	37, 1466
AccB1I	GGYRCC	2 cut(s)	1096, 2002
AciI	CCGC	2 cut(s)	256, 1043
AclWI	GGATC	4 cut(s)	635, 1730, 1785, 1857
AcsI	RAATTY	1 cut(s)	1664
AcuI	CTGAAG	6 cut(s)	183, 516, 669, 804, 1323, 1938
AfaI	GTAC	2 cut(s)	428, 1367
AfiI	CCNNNNNNNGG	6 cut(s)	40, 346, 517, 754, 971, 1779
AflII	CTTAAG	1 cut(s)	767
AflIII	ACRYGT	2 cut(s)	1552, 1938
AgsI	TTSAA	9 cut(s)	207, 854, 878, 921, 986, 1024, 1185, 1889, 2029
AhdI	GACNNNNNGTC	1 cut(s)	1295
AjnI	CCWGG	1 cut(s)	1976
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
AluBI	AGCT	7 cut(s)	20, 152, 161, 473, 815, 1073, 1193
AluI	AGCT	7 cut(s)	20, 152, 161, 473, 815, 1073, 1193
Alw21I	GWGCWC	2 cut(s)	1075, 1585
Alw26I	GTCTC	3 cut(s)	388, 1199, 1535
AlwI	GGATC	4 cut(s)	635, 1730, 1785, 1857
Ama87I	CYCGRG	2 cut(s)	965, 1398
AoxI	GGCC	3 cut(s)	242, 756, 1402
ApeKI	GCWGC	2 cut(s)	258, 1961
ApoI	RAATTY	1 cut(s)	1664
AseI	ATTAAT	1 cut(s)	1623
Asp700I	GAANNNNTTC	1 cut(s)	399
AspLEI	GCGC	4 cut(s)	530, 908, 1660, 1897
AspS9I	GGNCC	1 cut(s)	1402
AsuC2I	CCSGG	1 cut(s)	1132
AsuHPI	GGTGA	4 cut(s)	674, 1649, 1733, 1943
AvaI	CYCGRG	2 cut(s)	965, 1398
BaeI	ACNNNNGTAYC	2 cut(s)	490, 523
BanI	GGYRCC	2 cut(s)	1096, 2002
BanII	GRGCYC	1 cut(s)	1075
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbsI	GAAGAC	1 cut(s)	195
Bbv12I	GWGCWC	2 cut(s)	1075, 1585
BbvI	GCAGC	2 cut(s)	245, 1948
BccI	CCATC	5 cut(s)	620, 857, 1252, 1634, 1922
BciT130I	CCWGG	1 cut(s)	1978
BciVI	GTATCC	2 cut(s)	518, 2161
BcnI	CCSGG	1 cut(s)	1132
BcoDI	GTCTC	3 cut(s)	388, 1199, 1535
BfaI	CTAG	7 cut(s)	231, 240, 264, 354, 1194, 1544, 1679
BfrI	CTTAAG	1 cut(s)	767
BfuAI	ACCTGC	2 cut(s)	37, 1466
BfuI	GTATCC	2 cut(s)	518, 2161
BisI	GCNGC	2 cut(s)	259, 1962
BlsI	GCNGC	2 cut(s)	260, 1963
BmcAI	AGTACT	2 cut(s)	428, 1367
Bme1390I	CCNGG	2 cut(s)	1132, 1978
BmeRI	GACNNNNNGTC	1 cut(s)	1295
BmeT110I	CYCGRG	2 cut(s)	965, 1398
BmgT120I	GGNCC	1 cut(s)	1402
BmiI	GGNNCC	4 cut(s)	351, 1098, 1403, 2004
BmrFI	CCNGG	2 cut(s)	1132, 1978
BoxI	GACNNNNGTC	1 cut(s)	2021
BpiI	GAAGAC	1 cut(s)	195
BpmI	CTGGAG	1 cut(s)	581
BpuEI	CTTGAG	2 cut(s)	26, 634
BpuMI	CCSGG	1 cut(s)	1132
BsaBI	GATNNNNATC	1 cut(s)	271
BsaJI	CCNNGG	5 cut(s)	11, 966, 1397, 1728, 1794
BsaWI	WCCGGW	1 cut(s)	193
BsaXI	ACNNNNNCTCC	2 cut(s)	355, 385
Bsc4I	CCNNNNNNNGG	6 cut(s)	40, 346, 517, 754, 971, 1779
Bse1I	ACTGG	3 cut(s)	508, 2116, 2234
Bse3DI	GCAATG	1 cut(s)	174
Bse8I	GATNNNNATC	1 cut(s)	271
BseBI	CCWGG	1 cut(s)	1978
BseDI	CCNNGG	5 cut(s)	11, 966, 1397, 1728, 1794
BseGI	GGATG	4 cut(s)	631, 1300, 1817, 1933
BseJI	GATNNNNATC	1 cut(s)	271
BseLI	CCNNNNNNNGG	6 cut(s)	40, 346, 517, 754, 971, 1779
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	5 cut(s)	437, 1140, 1801, 1916, 2241
BseNI	ACTGG	3 cut(s)	508, 2116, 2234
BseRI	GAGGAG	2 cut(s)	1581, 1630
BseXI	GCAGC	2 cut(s)	245, 1948
BsgI	GTGCAG	1 cut(s)	1444
BshFI	GGCC	3 cut(s)	244, 758, 1404
BshNI	GGYRCC	2 cut(s)	1096, 2002
BsiHKAI	GWGCWC	2 cut(s)	1075, 1585
BsiHKCI	CYCGRG	2 cut(s)	965, 1398
BsiSI	CCGG	2 cut(s)	194, 1131
BslFI	GGGAC	3 cut(s)	1102, 1179, 1283
BslI	CCNNNNNNNGG	6 cut(s)	40, 346, 517, 754, 971, 1779
BsmAI	GTCTC	3 cut(s)	388, 1199, 1535
BsmBI	CGTCTC	1 cut(s)	1199
BsmFI	GGGAC	3 cut(s)	1102, 1179, 1283
BsnI	GGCC	3 cut(s)	244, 758, 1404
BsoBI	CYCGRG	2 cut(s)	965, 1398
Bsp1286I	GDGCHC	2 cut(s)	1075, 1585
Bsp143I	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
BspACI	CCGC	2 cut(s)	256, 1043
BspANI	GGCC	3 cut(s)	244, 758, 1404
BspCNI	CTCAG	5 cut(s)	436, 1141, 1800, 1915, 2242
BspHI	TCATGA	1 cut(s)	1819
BspLI	GGNNCC	4 cut(s)	351, 1098, 1403, 2004
BspMI	ACCTGC	2 cut(s)	37, 1466
BspPI	GGATC	4 cut(s)	635, 1730, 1785, 1857
BspT107I	GGYRCC	2 cut(s)	1096, 2002
BspTI	CTTAAG	1 cut(s)	767
BsrDI	GCAATG	1 cut(s)	174
BsrI	ACTGG	3 cut(s)	508, 2116, 2234
BssECI	CCNNGG	5 cut(s)	11, 966, 1397, 1728, 1794
BssMI	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
BssT1I	CCWWGG	3 cut(s)	11, 1728, 1794
Bst2UI	CCWGG	1 cut(s)	1978
Bst4CI	ACNGT	4 cut(s)	574, 832, 1120, 1424
Bst6I	CTCTTC	2 cut(s)	101, 2024
BstAFI	CTTAAG	1 cut(s)	767
BstC8I	GCNNGC	4 cut(s)	66, 129, 246, 341
BstDEI	CTNAG	8 cut(s)	102, 155, 423, 1149, 1329, 1787, 1902, 2250
BstENI	CCTNNNNNAGG	1 cut(s)	752
BstF5I	GGATG	4 cut(s)	631, 1300, 1817, 1933
BstHHI	GCGC	4 cut(s)	530, 908, 1660, 1897
BstKTI	GATC	5 cut(s)	643, 1496, 1738, 1793, 1852
BstMAI	GTCTC	3 cut(s)	388, 1199, 1535
BstMBI	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
BstMWI	GCNNNNNNNGC	6 cut(s)	61, 137, 158, 267, 1070, 1458
BstNI	CCWGG	1 cut(s)	1978
BstNSI	RCATGY	6 cut(s)	228, 339, 906, 1556, 1942, 2089
BstPAI	GACNNNNGTC	1 cut(s)	2021
BstSCI	CCNGG	2 cut(s)	1130, 1976
BstV1I	GCAGC	2 cut(s)	245, 1948
BstV2I	GAAGAC	1 cut(s)	195
BstX2I	RGATCY	2 cut(s)	1790, 1849
BstYI	RGATCY	2 cut(s)	1790, 1849
BsuI	GTATCC	2 cut(s)	518, 2161
BsuRI	GGCC	3 cut(s)	244, 758, 1404
BtsCI	GGATG	4 cut(s)	631, 1300, 1817, 1933
BtsI	GCAGTG	1 cut(s)	1454
BtsIMutI	CAGTG	6 cut(s)	501, 530, 837, 1315, 1454, 2247
BveI	ACCTGC	2 cut(s)	37, 1466
Cac8I	GCNNGC	4 cut(s)	66, 129, 246, 341
CciI	TCATGA	1 cut(s)	1819
CfoI	GCGC	4 cut(s)	530, 908, 1660, 1897
Cfr13I	GGNCC	1 cut(s)	1402
CseI	GACGC	1 cut(s)	1674
Csp6I	GTAC	2 cut(s)	427, 1366
CspCI	CAANNNNNGTGG	2 cut(s)	2121, 2156
CviQI	GTAC	2 cut(s)	427, 1366
DdeI	CTNAG	8 cut(s)	102, 155, 423, 1149, 1329, 1787, 1902, 2250
DpnI	GATC	5 cut(s)	642, 1495, 1737, 1792, 1851
DpnII	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
DraI	TTTAAA	1 cut(s)	1410
DriI	GACNNNNNGTC	1 cut(s)	1295
Eam1104I	CTCTTC	2 cut(s)	101, 2024
Eam1105I	GACNNNNNGTC	1 cut(s)	1295
EarI	CTCTTC	2 cut(s)	101, 2024
Ecl136II	GAGCTC	1 cut(s)	1073
Eco130I	CCWWGG	3 cut(s)	11, 1728, 1794
Eco24I	GRGCYC	1 cut(s)	1075
Eco53kI	GAGCTC	1 cut(s)	1073
Eco57I	CTGAAG	6 cut(s)	183, 516, 669, 804, 1323, 1938
Eco88I	CYCGRG	2 cut(s)	965, 1398
EcoICRI	GAGCTC	1 cut(s)	1073
EcoNI	CCTNNNNNAGG	1 cut(s)	752
EcoO109I	RGGNCCY	1 cut(s)	1402
EcoRII	CCWGG	1 cut(s)	1976
EcoT14I	CCWWGG	3 cut(s)	11, 1728, 1794
EcoT22I	ATGCAT	3 cut(s)	226, 312, 2182
EcoT38I	GRGCYC	1 cut(s)	1075
ErhI	CCWWGG	3 cut(s)	11, 1728, 1794
Esp3I	CGTCTC	1 cut(s)	1199
FalI	AAGNNNNNCTT	4 cut(s)	138, 170, 1322, 1354
FaqI	GGGAC	3 cut(s)	1102, 1179, 1283
FauI	CCCGC	1 cut(s)	263
FauNDI	CATATG	3 cut(s)	388, 1966, 2206
Fnu4HI	GCNGC	2 cut(s)	259, 1962
FokI	GGATG	4 cut(s)	638, 1307, 1824, 1940
FriOI	GRGCYC	1 cut(s)	1075
Fsp4HI	GCNGC	2 cut(s)	259, 1962
FspAI	RTGCGCAY	2 cut(s)	907, 1659
FspBI	CTAG	7 cut(s)	231, 240, 264, 354, 1194, 1544, 1679
FspI	TGCGCA	2 cut(s)	907, 1659
GlaI	GCGC	4 cut(s)	529, 907, 1659, 1896
GluI	GCNGC	2 cut(s)	259, 1962
GsuI	CTGGAG	1 cut(s)	581
HaeIII	GGCC	3 cut(s)	244, 758, 1404
HapII	CCGG	2 cut(s)	194, 1131
HgaI	GACGC	1 cut(s)	1674
HhaI	GCGC	4 cut(s)	530, 908, 1660, 1897
Hin6I	GCGC	4 cut(s)	528, 906, 1658, 1895
HinP1I	GCGC	4 cut(s)	528, 906, 1658, 1895
HincII	GTYRAC	1 cut(s)	538
HindII	GTYRAC	1 cut(s)	538
HpaII	CCGG	2 cut(s)	194, 1131
HphI	GGTGA	4 cut(s)	674, 1649, 1733, 1943
Hpy166II	GTNNAC	5 cut(s)	325, 538, 577, 1541, 1908
Hpy8I	GTNNAC	5 cut(s)	325, 538, 577, 1541, 1908
HpyAV	CCTTC	7 cut(s)	577, 654, 992, 1087, 1327, 1947, 2036
HpyCH4III	ACNGT	4 cut(s)	574, 832, 1120, 1424
HpyCH4IV	ACGT	2 cut(s)	183, 2075
HpyF10VI	GCNNNNNNNGC	6 cut(s)	61, 137, 158, 267, 1070, 1458
HpyF3I	CTNAG	8 cut(s)	102, 155, 423, 1149, 1329, 1787, 1902, 2250
HpySE526I	ACGT	2 cut(s)	183, 2075
HspAI	GCGC	4 cut(s)	528, 906, 1658, 1895
Kzo9I	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
LmnI	GCTCC	4 cut(s)	445, 718, 929, 1078
Lsp1109I	GCAGC	2 cut(s)	245, 1948
MaeI	CTAG	7 cut(s)	231, 240, 264, 354, 1194, 1544, 1679
MaeII	ACGT	2 cut(s)	183, 2075
MaeIII	GTNAC	4 cut(s)	631, 866, 1563, 1881
MalI	GATC	5 cut(s)	642, 1495, 1737, 1792, 1851
MboI	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
MfeI	CAATTG	2 cut(s)	1985, 2019
MflI	RGATCY	2 cut(s)	1790, 1849
MhlI	GDGCHC	2 cut(s)	1075, 1585
MlyI	GAGTC	6 cut(s)	734, 1121, 1204, 1832, 1889, 1894
MmeI	TCCRAC	2 cut(s)	327, 933
Mph1103I	ATGCAT	3 cut(s)	226, 312, 2182
MroXI	GAANNNNTTC	1 cut(s)	399
MseI	TTAA	8 cut(s)	768, 899, 1362, 1391, 1409, 1454, 1623, 1670
MslI	CAYNNNNRTG	3 cut(s)	225, 554, 840
MspA1I	CMGCKG	2 cut(s)	258, 473
MspCI	CTTAAG	1 cut(s)	767
MspI	CCGG	2 cut(s)	194, 1131
MspR9I	CCNGG	2 cut(s)	1132, 1978
MunI	CAATTG	2 cut(s)	1985, 2019
MvaI	CCWGG	1 cut(s)	1978
MwoI	GCNNNNNNNGC	6 cut(s)	61, 137, 158, 267, 1070, 1458
NciI	CCSGG	1 cut(s)	1132
NdeI	CATATG	3 cut(s)	388, 1966, 2206
NdeII	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
NlaIV	GGNNCC	4 cut(s)	351, 1098, 1403, 2004
NmuCI	GTSAC	1 cut(s)	1881
NsbI	TGCGCA	2 cut(s)	907, 1659
NsiI	ATGCAT	3 cut(s)	226, 312, 2182
NspI	RCATGY	6 cut(s)	228, 339, 906, 1556, 1942, 2089
PagI	TCATGA	1 cut(s)	1819
PciI	ACATGT	2 cut(s)	1552, 1938
PdmI	GAANNNNTTC	1 cut(s)	399
PfeI	GAWTC	5 cut(s)	395, 878, 1181, 1600, 2098
PflFI	GACNNNGTC	1 cut(s)	743
PfoI	TCCNGGA	1 cut(s)	1130
PkrI	GCNGC	2 cut(s)	260, 1963
PleI	GAGTC	6 cut(s)	734, 1121, 1204, 1831, 1888, 1894
PpsI	GAGTC	6 cut(s)	734, 1121, 1204, 1831, 1888, 1894
PscI	ACATGT	2 cut(s)	1552, 1938
PshAI	GACNNNNGTC	1 cut(s)	2021
PshBI	ATTAAT	1 cut(s)	1623
Psp124BI	GAGCTC	1 cut(s)	1075
Psp6I	CCWGG	1 cut(s)	1976
PspGI	CCWGG	1 cut(s)	1976
PspN4I	GGNNCC	4 cut(s)	351, 1098, 1403, 2004
PspPI	GGNCC	1 cut(s)	1402
PsuI	RGATCY	2 cut(s)	1790, 1849
PsyI	GACNNNGTC	1 cut(s)	743
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	2 cut(s)	428, 1367
RsaNI	GTAC	2 cut(s)	427, 1366
RseI	CAYNNNNRTG	3 cut(s)	225, 554, 840
SacI	GAGCTC	1 cut(s)	1075
SaqAI	TTAA	8 cut(s)	768, 899, 1362, 1391, 1409, 1454, 1623, 1670
SatI	GCNGC	2 cut(s)	259, 1962
Sau3AI	GATC	5 cut(s)	640, 1493, 1735, 1790, 1849
Sau96I	GGNCC	1 cut(s)	1402
ScaI	AGTACT	2 cut(s)	428, 1367
SchI	GAGTC	6 cut(s)	734, 1121, 1204, 1832, 1889, 1894
ScrFI	CCNGG	2 cut(s)	1132, 1978
SduI	GDGCHC	2 cut(s)	1075, 1585
SmiMI	CAYNNNNRTG	3 cut(s)	225, 554, 840
SmlI	CTYRAG	3 cut(s)	5, 613, 767
SmoI	CTYRAG	3 cut(s)	5, 613, 767
SsiI	CCGC	2 cut(s)	256, 1043
SspI	AATATT	1 cut(s)	787
SspMI	CTAG	7 cut(s)	231, 240, 264, 354, 1194, 1544, 1679
SstI	GAGCTC	1 cut(s)	1075
StyD4I	CCNGG	2 cut(s)	1130, 1976
StyI	CCWWGG	3 cut(s)	11, 1728, 1794
TaaI	ACNGT	4 cut(s)	574, 832, 1120, 1424
TaiI	ACGT	2 cut(s)	186, 2078
TaqI	TCGA	3 cut(s)	1318, 1502, 1972
TatI	WGTACW	2 cut(s)	426, 1365
TfiI	GAWTC	5 cut(s)	395, 878, 1181, 1600, 2098
Tru1I	TTAA	8 cut(s)	768, 899, 1362, 1391, 1409, 1454, 1623, 1670
Tru9I	TTAA	8 cut(s)	768, 899, 1362, 1391, 1409, 1454, 1623, 1670
TscAI	CASTG	6 cut(s)	508, 530, 837, 1315, 1454, 2254
TseFI	GTSAC	1 cut(s)	1881
TseI	GCWGC	2 cut(s)	258, 1961
Tsp45I	GTSAC	1 cut(s)	1881
TspDTI	ATGAA	7 cut(s)	209, 392, 957, 1023, 1265, 1677, 1851
TspGWI	ACGGA	1 cut(s)	1242
TspRI	CASTG	6 cut(s)	508, 530, 837, 1315, 1454, 2254
Tth111I	GACNNNGTC	1 cut(s)	743
Vha464I	CTTAAG	1 cut(s)	767
VspI	ATTAAT	1 cut(s)	1623
XagI	CCTNNNNNAGG	1 cut(s)	752
XapI	RAATTY	1 cut(s)	1664
XbaI	TCTAGA	1 cut(s)	263
XceI	RCATGY	6 cut(s)	228, 339, 906, 1556, 1942, 2089
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1637
XmnI	GAANNNNTTC	1 cut(s)	399
XspI	CTAG	7 cut(s)	231, 240, 264, 354, 1194, 1544, 1679
ZrmI	AGTACT	2 cut(s)	428, 1367
Zsp2I	ATGCAT	3 cut(s)	226, 312, 2182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.