Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0005444

Physical Location & Seq

Genomic Coordinates Reverse (-)

72294187 .. 72301226

Gene Structure 7040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00051630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

ATGCTTGAGCCAAGGGAAGCTGATATACCTGCCCTGTTCTTGGTTTTCGTTGTGCTTCCTTTGCTTGCTTATGTTTTACTTGGAAAATGGAGTGAGGCATCTAAGAAGAGAGAGAGGGTAAGTTTGCTTGCTCAACTCGCATCAGAAGAAGCTCTTAGAGCTGAAGCAATGGCTGTTCCTGACGTTATTCCTCCGGTTTCGTCTTCAAAGAATAATGTTCATGCATGTGCTAGATGCTCTAGGCCAGCCACAACCCGCTGCTCTAGATGCAAATCTGTCAGATATTGTTCTGGGAAGTGTCAAATAATGCATTGGAGGGAAGTTCACAGGCAAACATGCCTGCAGTTGGAACCTAGTAGTGCAACCTCATCTCCTATGGCTGTCTCATATGGAGAATCTTTTCATAATGACAGCATCAATTCTCAGTACTTTGGGTCTGCTATGGAGCAGATTTTGGGAGAGGAAGCACCAGCTGAAAATATAATTTACCCTCCAATTTACACTGGTATCCCAAATAAGGTTCAGTGCGCTTCAGTTGACCCCTCTCACATTTCCATGCTGGAGAAAAGAACTGTGGACAAGAAGGTTTCCCGAAAATCCAAAACCGAACTCTTGAGGAAAAAGGATGGAGTAACATTTGATCCTTCTGAAGAAACATTTGGTGATTGGACTACCCAATCAACCTTTTCTAATGTTGCATCAAGAGAGGTTTCTGTGGAGCATAAGCCAACAAATCTTGACTCTGTCCTGTCAGAGGCCGAAACTCTTAAGAAATACCATGCCAATATTTCTGATGCCTATATCAATGGACAAGCTACTTCAGGATATACAGTGCATGAGAATGATAAGTTTCAAGGTCAAGATGGTAACATATTTGAATCAAGAAGCAACTCTGGACTAACATGTGCATCATATTCTTCAAAAAGTGGAGCAGATTTGCATGAAGTGGGGTTGGACTTTGTTCCCGAGGGAGGACATTCTCTTCAAGGAGAAAAAACTTCCAATGATGAAAAGGCAGAGTTCAAATGTTCAGAAATTACCGCAGTAAAGGGAAGTGTAAAGGCTAAAAGAGCTCCATATTCTCTTGGGACGAAGGTGCCTAAATTGTCAAAATCAACAGTCAAGGACTCTGGGAAGCAGTATTGCTCCGAGATAGAGAGGCAGGGACAAATTACTGATGATTCAATAGCTAGAATGAGAGAGACGACTCCACAGGGAAGCAACGGAATGGCAAACATAAAGATTATGAAGATGATGGGTCTAAAGAAGCCAAAAAACATTACCAGACAGGATGTGCCTGAAGTTAGTGGTTATAAACACAAAACTAAGAAGGTCTTGTTTCCTTATGACGAGTTTGTTAAGTACTTTCAGAGTGAAGTTTTTGACTTAACACCTCGGGGCCTTTTAAATTGTGGGAACAGTTGCTATGCAAACGCTGTCTTGCAGTGCTTAACCTGCACGAAGCCACTCATTATCTATTTGCTTCGCAGATCACATTCGAGAGCCTGTTGTGGTAAAGATTGGTGTCTCATGTGTGAACTAGAGCAACATGTGATGATGTTACGGGAAAGTGGGGGTGCTCTTTCTCCTCGTCAGATTCTTTTTCACATGCGGAGTATTAATTGCCAAATCGGTGATGGAAGTCAGGAAGATGCGCATGAATTTTTAAGGCTTCTAGTAGCATCAATGCAATCTATATGCTTGGAGGGGTTGGGTGGTGAAACCAAGGTTGATCCCAGATTACAAGAAACAACTTTTATACAACACACCTTTGGTGGGCATCTCAGATCCAAGGTCAAGTGTTTGAGATGTCATCATGAGTCTGAACGATATGAAAACATCATGGATCTTACATTAGAAATATATGGTTGGGTTGAGTCACTTGAAGATGCGCTGACTCAGTTTACAACACCTGAAGATTTGGATGGTGAAAACATGTATAGATGTGGAAGGTGTGCTGCATATGTTCGAGCCAGGAAGCAATTGAGCATACATGAGGCGCCAAATATCCTGACAATTGTCTTGAAGAGGTTTCAGGAAGGAAAATATGGGAAAATAAACAAGTGCATCACGTTTCCAGACATGCTGGATATGATTCCATTTATGACTGGAATGGGCGACAGTCCTCCACTTTACTTGCTCTATGCTGTTGTGGTGCATTTGGATACGCAAAATGCATCTTTCTCTGGACATTATGTGGCATATGTGAAAGATATGCGAGGCAACTGGTTCAGGATAGATGACACTGAGGTTCAGCCCGTGTCCATGAGCCAGGTTATGATGGAAGGGGCATATATTTTGTTCTATATGAGGTCTTGCCCTCGCCCTCAAAGAGCATTTGGTGGAAAAACTATCAGGCAGCAAGTTCCAAATCTTGAAAATGGTTCCTTGCCAAAAGCTCAGAGGCCAAAGCCAAGCCAAAGCATACCCAGCGGCCAATATGTTAGCCCAGAGCATTTACCTAATTTTATCAGGCCAGAAACTGCAAGTGGCTTTGCCAACAGCACCTGCAATGACATCCTTAGGAGTTCTAATGGGAATGTTTTCCGAACGGCGGAAACATATGTTGACCCCACAAGTATGGAATTCTCTGATGCTACATCTAGCGATTGGTCCCTTTTTACAAGTTCTGATGAGGCTTCTTTCACAACTGAGAGCACTAGAGACTCTTTCAGTACTGTTGATCATGCTGATGCTGGCAATATGGATCCAATCTCGTCAATTTTCAACATCTTGTATGCGCCAGAATACTCTCGCAGTTCTGTTGCCTGTAGAAAGATTTCAAATAGTAGGCCACACAGTAGCTTTGTTTCTCAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

940

Amino Acids

104.94

Weight (kDa)

6.8

Isoelectric Point (pI)

52.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	76 - 113	2.2e-09	MYND finger
UCH	PF00443	466 - 769	7.2e-53	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	467 - 751	8.2e-21	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17110 AT1G17110 AT1G17110
fragaria_vesca	FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820
malus_domestica	MD05G1206800.v1.1 MD10G1193900.v1.1
prunus_persica	Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1
pyrus_communis	pycom05g19290 pycom10g16770
rosa_chinensis	RchiOBHm_Chr5g0028031
rosa_laevigata	RLG00000033059
rosa_multiflora	Rmu_sc0009432.1_g000009
rosa_roxburghii	Rroxscaffold_1G00051630
rosa_rugosa	Rorug05G0103600
rosa_samantha	Rh5AG197200 Rh5BG195400 Rh5CG215600 Rh5DG197000
rosa_wichuraiana	Rw5G017980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1314
AarI	CACCTGC	1 cut(s)	2516
Acc16I	TGCGCA	1 cut(s)	1656
Acc36I	ACCTGC	3 cut(s)	37, 1463, 2516
AccB1I	GGYRCC	2 cut(s)	1096, 1999
AciI	CCGC	5 cut(s)	256, 1041, 1612, 2433, 2555
AclWI	GGATC	6 cut(s)	635, 1727, 1782, 1854, 2702, 2715
AcoI	YGGCCR	1 cut(s)	2434
AcsI	RAATTY	2 cut(s)	1661, 2585
AcuI	CTGAAG	6 cut(s)	183, 516, 669, 804, 1320, 1935
AcyI	GRCGYC	1 cut(s)	2000
AfaI	GTAC	3 cut(s)	428, 1364, 2677
AfiI	CCNNNNNNNGG	7 cut(s)	40, 346, 517, 754, 971, 1776, 2554
AflII	CTTAAG	1 cut(s)	767
AflIII	ACRYGT	3 cut(s)	902, 1549, 1935
AjnI	CCWGG	2 cut(s)	1973, 2271
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
AluBI	AGCT	9 cut(s)	20, 152, 161, 473, 815, 1073, 1190, 2399, 2805
AluI	AGCT	9 cut(s)	20, 152, 161, 473, 815, 1073, 1190, 2399, 2805
Alw21I	GWGCWC	3 cut(s)	1075, 1582, 2660
Alw26I	GTCTC	4 cut(s)	388, 1196, 1532, 2658
AlwI	GGATC	6 cut(s)	635, 1727, 1782, 1854, 2702, 2715
AlwNI	CAGNNNCTG	2 cut(s)	2483, 2508
Ama87I	CYCGRG	2 cut(s)	965, 1395
AoxI	GGCC	7 cut(s)	242, 756, 1399, 2405, 2434, 2474, 2792
ApeKI	GCWGC	3 cut(s)	258, 1958, 2359
ApoI	RAATTY	2 cut(s)	1661, 2585
AseI	ATTAAT	1 cut(s)	1620
Asp700I	GAANNNNTTC	3 cut(s)	399, 2543, 2779
AspLEI	GCGC	5 cut(s)	530, 1657, 1894, 2002, 2743
AspS9I	GGNCC	2 cut(s)	1399, 2613
AsuHPI	GGTGA	4 cut(s)	674, 1646, 1730, 1940
AvaI	CYCGRG	2 cut(s)	965, 1395
AvaII	GGWCC	1 cut(s)	2613
AxyI	CCTNAGG	1 cut(s)	2522
BaeI	ACNNNNGTAYC	2 cut(s)	490, 523
BamHI	GGATCC	1 cut(s)	2707
BanI	GGYRCC	2 cut(s)	1096, 1999
BanII	GRGCYC	1 cut(s)	1075
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbsI	GAAGAC	1 cut(s)	195
Bbv12I	GWGCWC	3 cut(s)	1075, 1582, 2660
BbvI	GCAGC	3 cut(s)	245, 1945, 2371
BccI	CCATC	6 cut(s)	620, 857, 1249, 1631, 1919, 2275
BceAI	ACGGC	1 cut(s)	2568
BciT130I	CCWGG	2 cut(s)	1975, 2273
BciVI	GTATCC	2 cut(s)	518, 2158
BclI	TGATCA	1 cut(s)	2683
BcoDI	GTCTC	4 cut(s)	388, 1196, 1532, 2658
BfaI	CTAG	9 cut(s)	231, 240, 264, 354, 1191, 1541, 1676, 2604, 2661
BfmI	CTRYAG	2 cut(s)	341, 2770
BfoI	RGCGCY	1 cut(s)	2003
BfrI	CTTAAG	1 cut(s)	767
BfuAI	ACCTGC	3 cut(s)	37, 1463, 2516
BfuI	GTATCC	2 cut(s)	518, 2158
BisI	GCNGC	4 cut(s)	259, 1959, 2360, 2434
BlsI	GCNGC	4 cut(s)	260, 1960, 2361, 2435
BmcAI	AGTACT	3 cut(s)	428, 1364, 2677
Bme1390I	CCNGG	2 cut(s)	1975, 2273
Bme18I	GGWCC	1 cut(s)	2613
BmeT110I	CYCGRG	2 cut(s)	965, 1395
BmgT120I	GGNCC	2 cut(s)	1399, 2613
BmiI	GGNNCC	7 cut(s)	351, 1098, 1400, 2001, 2386, 2615, 2709
BmrFI	CCNGG	2 cut(s)	1975, 2273
BoxI	GACNNNNGTC	1 cut(s)	2018
BpiI	GAAGAC	1 cut(s)	195
BpmI	CTGGAG	1 cut(s)	581
BpuEI	CTTGAG	2 cut(s)	26, 634
BsaBI	GATNNNNATC	1 cut(s)	271
BsaHI	GRCGYC	1 cut(s)	2000
BsaJI	CCNNGG	5 cut(s)	11, 966, 1394, 1725, 1791
BsaWI	WCCGGW	1 cut(s)	193
BsaXI	ACNNNNNCTCC	2 cut(s)	355, 385
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 346, 517, 754, 971, 1776, 2554
Bse1I	ACTGG	3 cut(s)	508, 2113, 2231
Bse21I	CCTNAGG	1 cut(s)	2522
Bse3DI	GCAATG	2 cut(s)	174, 2518
Bse8I	GATNNNNATC	1 cut(s)	271
BseBI	CCWGG	2 cut(s)	1975, 2273
BseDI	CCNNGG	5 cut(s)	11, 966, 1394, 1725, 1791
BseGI	GGATG	4 cut(s)	631, 1297, 1930, 2517
BseJI	GATNNNNATC	1 cut(s)	271
BseLI	CCNNNNNNNGG	7 cut(s)	40, 346, 517, 754, 971, 1776, 2554
BseMI	GCAATG	2 cut(s)	174, 2518
BseMII	CTCAG	6 cut(s)	437, 1798, 1913, 2238, 2414, 2643
BseNI	ACTGG	3 cut(s)	508, 2113, 2231
BseRI	GAGGAG	1 cut(s)	1578
BseXI	GCAGC	3 cut(s)	245, 1945, 2371
BseYI	CCCAGC	1 cut(s)	2429
BsgI	GTGCAG	1 cut(s)	1441
BshFI	GGCC	7 cut(s)	244, 758, 1401, 2407, 2436, 2476, 2794
BshNI	GGYRCC	2 cut(s)	1096, 1999
BsiHKAI	GWGCWC	3 cut(s)	1075, 1582, 2660
BsiHKCI	CYCGRG	2 cut(s)	965, 1395
BsiSI	CCGG	1 cut(s)	194
BslFI	GGGAC	3 cut(s)	1102, 1179, 2599
BslI	CCNNNNNNNGG	7 cut(s)	40, 346, 517, 754, 971, 1776, 2554
BsmAI	GTCTC	4 cut(s)	388, 1196, 1532, 2658
BsmBI	CGTCTC	1 cut(s)	1196
BsmFI	GGGAC	3 cut(s)	1102, 1179, 2599
BsnI	GGCC	7 cut(s)	244, 758, 1401, 2407, 2436, 2476, 2794
BsoBI	CYCGRG	2 cut(s)	965, 1395
Bsp1286I	GDGCHC	3 cut(s)	1075, 1582, 2660
Bsp143I	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
BspACI	CCGC	5 cut(s)	256, 1041, 1612, 2433, 2555
BspANI	GGCC	7 cut(s)	244, 758, 1401, 2407, 2436, 2476, 2794
BspCNI	CTCAG	6 cut(s)	436, 1797, 1912, 2239, 2413, 2644
BspHI	TCATGA	1 cut(s)	1816
BspLI	GGNNCC	7 cut(s)	351, 1098, 1400, 2001, 2386, 2615, 2709
BspMAI	CTGCAG	1 cut(s)	345
BspMI	ACCTGC	3 cut(s)	37, 1463, 2516
BspPI	GGATC	6 cut(s)	635, 1727, 1782, 1854, 2702, 2715
BspT107I	GGYRCC	2 cut(s)	1096, 1999
BspTI	CTTAAG	1 cut(s)	767
BsrDI	GCAATG	2 cut(s)	174, 2518
BsrI	ACTGG	3 cut(s)	508, 2113, 2231
BssECI	CCNNGG	5 cut(s)	11, 966, 1394, 1725, 1791
BssMI	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
BssNI	GRCGYC	1 cut(s)	2000
BssT1I	CCWWGG	3 cut(s)	11, 1725, 1791
Bst2UI	CCWGG	2 cut(s)	1975, 2273
Bst4CI	ACNGT	7 cut(s)	574, 832, 1120, 1421, 2123, 2680, 2801
Bst6I	CTCTTC	3 cut(s)	101, 987, 2021
BstACI	GRCGYC	1 cut(s)	2000
BstAFI	CTTAAG	1 cut(s)	767
BstC8I	GCNNGC	5 cut(s)	66, 129, 246, 341, 2698
BstENI	CCTNNNNNAGG	1 cut(s)	752
BstF5I	GGATG	4 cut(s)	631, 1297, 1930, 2517
BstH2I	RGCGCY	1 cut(s)	2003
BstHHI	GCGC	5 cut(s)	530, 1657, 1894, 2002, 2743
BstKTI	GATC	7 cut(s)	643, 1493, 1735, 1790, 1849, 2686, 2710
BstMAI	GTCTC	4 cut(s)	388, 1196, 1532, 2658
BstMBI	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
BstMWI	GCNNNNNNNGC	7 cut(s)	61, 137, 158, 267, 1070, 1455, 2430
BstNI	CCWGG	2 cut(s)	1975, 2273
BstNSI	RCATGY	7 cut(s)	228, 339, 906, 1553, 1612, 1939, 2086
BstPAI	GACNNNNGTC	1 cut(s)	2018
BstSCI	CCNGG	2 cut(s)	1973, 2271
BstSFI	CTRYAG	2 cut(s)	341, 2770
BstV1I	GCAGC	3 cut(s)	245, 1945, 2371
BstV2I	GAAGAC	1 cut(s)	195
BstX2I	RGATCY	3 cut(s)	1787, 1846, 2707
BstXI	CCANNNNNNTGG	1 cut(s)	2581
BstYI	RGATCY	3 cut(s)	1787, 1846, 2707
Bsu36I	CCTNAGG	1 cut(s)	2522
BsuI	GTATCC	2 cut(s)	518, 2158
BsuRI	GGCC	7 cut(s)	244, 758, 1401, 2407, 2436, 2476, 2794
BtsCI	GGATG	4 cut(s)	631, 1297, 1930, 2517
BtsI	GCAGTG	1 cut(s)	1451
BtsIMutI	CAGTG	5 cut(s)	501, 530, 837, 1451, 2244
BveI	ACCTGC	3 cut(s)	37, 1463, 2516
Cac8I	GCNNGC	5 cut(s)	66, 129, 246, 341, 2698
CaiI	CAGNNNCTG	2 cut(s)	2483, 2508
CciI	TCATGA	1 cut(s)	1816
CfoI	GCGC	5 cut(s)	530, 1657, 1894, 2002, 2743
Cfr13I	GGNCC	2 cut(s)	1399, 2613
Csp6I	GTAC	3 cut(s)	427, 1363, 2676
CspCI	CAANNNNNGTGG	2 cut(s)	2118, 2153
CviQI	GTAC	3 cut(s)	427, 1363, 2676
DinI	GGCGCC	1 cut(s)	2001
DpnI	GATC	7 cut(s)	642, 1492, 1734, 1789, 1848, 2685, 2709
DpnII	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
DraI	TTTAAA	1 cut(s)	1407
EaeI	YGGCCR	1 cut(s)	2434
Eam1104I	CTCTTC	3 cut(s)	101, 987, 2021
EarI	CTCTTC	3 cut(s)	101, 987, 2021
EciI	GGCGGA	1 cut(s)	2570
Ecl136II	GAGCTC	1 cut(s)	1073
Eco130I	CCWWGG	3 cut(s)	11, 1725, 1791
Eco24I	GRGCYC	1 cut(s)	1075
Eco47I	GGWCC	1 cut(s)	2613
Eco53kI	GAGCTC	1 cut(s)	1073
Eco57I	CTGAAG	6 cut(s)	183, 516, 669, 804, 1320, 1935
Eco81I	CCTNAGG	1 cut(s)	2522
Eco88I	CYCGRG	2 cut(s)	965, 1395
EcoICRI	GAGCTC	1 cut(s)	1073
EcoNI	CCTNNNNNAGG	1 cut(s)	752
EcoO109I	RGGNCCY	1 cut(s)	1399
EcoRI	GAATTC	1 cut(s)	2585
EcoRII	CCWGG	2 cut(s)	1973, 2271
EcoT14I	CCWWGG	3 cut(s)	11, 1725, 1791
EcoT22I	ATGCAT	3 cut(s)	226, 312, 2179
EcoT38I	GRGCYC	1 cut(s)	1075
EgeI	GGCGCC	1 cut(s)	2001
EheI	GGCGCC	1 cut(s)	2001
ErhI	CCWWGG	3 cut(s)	11, 1725, 1791
Esp3I	CGTCTC	1 cut(s)	1196
FalI	AAGNNNNNCTT	4 cut(s)	138, 170, 1319, 1351
FaqI	GGGAC	3 cut(s)	1102, 1179, 2599
FauI	CCCGC	1 cut(s)	263
FauNDI	CATATG	4 cut(s)	388, 1963, 2203, 2563
FbaI	TGATCA	1 cut(s)	2683
Fnu4HI	GCNGC	4 cut(s)	259, 1959, 2360, 2434
FokI	GGATG	4 cut(s)	638, 1304, 1937, 2504
FriOI	GRGCYC	1 cut(s)	1075
Fsp4HI	GCNGC	4 cut(s)	259, 1959, 2360, 2434
FspAI	RTGCGCAY	1 cut(s)	1656
FspBI	CTAG	9 cut(s)	231, 240, 264, 354, 1191, 1541, 1676, 2604, 2661
FspI	TGCGCA	1 cut(s)	1656
GlaI	GCGC	5 cut(s)	529, 1656, 1893, 2001, 2742
GluI	GCNGC	4 cut(s)	259, 1959, 2360, 2434
GsaI	CCCAGC	1 cut(s)	2433
GsuI	CTGGAG	1 cut(s)	581
HaeII	RGCGCY	1 cut(s)	2003
HaeIII	GGCC	7 cut(s)	244, 758, 1401, 2407, 2436, 2476, 2794
HapII	CCGG	1 cut(s)	194
HhaI	GCGC	5 cut(s)	530, 1657, 1894, 2002, 2743
Hin1I	GRCGYC	1 cut(s)	2000
Hin6I	GCGC	5 cut(s)	528, 1655, 1892, 2000, 2741
HinP1I	GCGC	5 cut(s)	528, 1655, 1892, 2000, 2741
HincII	GTYRAC	2 cut(s)	538, 2569
HindII	GTYRAC	2 cut(s)	538, 2569
HpaII	CCGG	1 cut(s)	194
HphI	GGTGA	4 cut(s)	674, 1646, 1730, 1940
Hpy166II	GTNNAC	6 cut(s)	325, 538, 577, 1538, 1905, 2569
Hpy8I	GTNNAC	6 cut(s)	325, 538, 577, 1538, 1905, 2569
HpyAV	CCTTC	7 cut(s)	577, 654, 1087, 1324, 1944, 2033, 2279
HpyCH4III	ACNGT	7 cut(s)	574, 832, 1120, 1421, 2123, 2680, 2801
HpyCH4IV	ACGT	2 cut(s)	183, 2072
HpyF10VI	GCNNNNNNNGC	7 cut(s)	61, 137, 158, 267, 1070, 1455, 2430
HpySE526I	ACGT	2 cut(s)	183, 2072
Hsp92I	GRCGYC	1 cut(s)	2000
HspAI	GCGC	5 cut(s)	528, 1655, 1892, 2000, 2741
KasI	GGCGCC	1 cut(s)	1999
Ksp22I	TGATCA	1 cut(s)	2683
Kzo9I	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
LmnI	GCTCC	5 cut(s)	445, 718, 929, 1078, 1151
Lsp1109I	GCAGC	3 cut(s)	245, 1945, 2371
MaeI	CTAG	9 cut(s)	231, 240, 264, 354, 1191, 1541, 1676, 2604, 2661
MaeII	ACGT	2 cut(s)	183, 2072
MaeIII	GTNAC	4 cut(s)	631, 866, 1560, 1878
MalI	GATC	7 cut(s)	642, 1492, 1734, 1789, 1848, 2685, 2709
MboI	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
MfeI	CAATTG	2 cut(s)	1982, 2016
MflI	RGATCY	3 cut(s)	1787, 1846, 2707
MhlI	GDGCHC	3 cut(s)	1075, 1582, 2660
Mly113I	GGCGCC	1 cut(s)	2000
MlyI	GAGTC	7 cut(s)	734, 1121, 1201, 1829, 1886, 1891, 2660
MmeI	TCCRAC	2 cut(s)	327, 933
Mph1103I	ATGCAT	3 cut(s)	226, 312, 2179
MroXI	GAANNNNTTC	3 cut(s)	399, 2543, 2779
MseI	TTAA	7 cut(s)	768, 1359, 1388, 1406, 1451, 1620, 1667
MslI	CAYNNNNRTG	5 cut(s)	225, 554, 840, 2579, 2691
MspA1I	CMGCKG	3 cut(s)	258, 473, 2433
MspCI	CTTAAG	1 cut(s)	767
MspI	CCGG	1 cut(s)	194
MspR9I	CCNGG	2 cut(s)	1975, 2273
MunI	CAATTG	2 cut(s)	1982, 2016
MvaI	CCWGG	2 cut(s)	1975, 2273
MwoI	GCNNNNNNNGC	7 cut(s)	61, 137, 158, 267, 1070, 1455, 2430
NarI	GGCGCC	1 cut(s)	2000
NdeI	CATATG	4 cut(s)	388, 1963, 2203, 2563
NdeII	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
NlaIV	GGNNCC	7 cut(s)	351, 1098, 1400, 2001, 2386, 2615, 2709
NmuCI	GTSAC	1 cut(s)	1878
NsbI	TGCGCA	1 cut(s)	1656
NsiI	ATGCAT	3 cut(s)	226, 312, 2179
NspI	RCATGY	7 cut(s)	228, 339, 906, 1553, 1612, 1939, 2086
PagI	TCATGA	1 cut(s)	1816
PaqCI	CACCTGC	1 cut(s)	2516
PciI	ACATGT	3 cut(s)	902, 1549, 1935
PdmI	GAANNNNTTC	3 cut(s)	399, 2543, 2779
PfeI	GAWTC	5 cut(s)	395, 878, 1181, 1597, 2095
PflFI	GACNNNGTC	1 cut(s)	743
PkrI	GCNGC	4 cut(s)	260, 1960, 2361, 2435
PleI	GAGTC	7 cut(s)	734, 1121, 1201, 1828, 1885, 1891, 2660
PluTI	GGCGCC	1 cut(s)	2003
PpsI	GAGTC	7 cut(s)	734, 1121, 1201, 1828, 1885, 1891, 2660
PscI	ACATGT	3 cut(s)	902, 1549, 1935
PshAI	GACNNNNGTC	1 cut(s)	2018
PshBI	ATTAAT	1 cut(s)	1620
PsiI	TTATAA	1 cut(s)	1314
Psp124BI	GAGCTC	1 cut(s)	1075
Psp6I	CCWGG	2 cut(s)	1973, 2271
PspFI	CCCAGC	1 cut(s)	2429
PspGI	CCWGG	2 cut(s)	1973, 2271
PspN4I	GGNNCC	7 cut(s)	351, 1098, 1400, 2001, 2386, 2615, 2709
PspPI	GGNCC	2 cut(s)	1399, 2613
PstI	CTGCAG	1 cut(s)	345
PstNI	CAGNNNCTG	2 cut(s)	2483, 2508
PsuI	RGATCY	3 cut(s)	1787, 1846, 2707
PsyI	GACNNNGTC	1 cut(s)	743
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	3 cut(s)	428, 1364, 2677
RsaNI	GTAC	3 cut(s)	427, 1363, 2676
RseI	CAYNNNNRTG	5 cut(s)	225, 554, 840, 2579, 2691
SacI	GAGCTC	1 cut(s)	1075
SaqAI	TTAA	7 cut(s)	768, 1359, 1388, 1406, 1451, 1620, 1667
SatI	GCNGC	4 cut(s)	259, 1959, 2360, 2434
Sau3AI	GATC	7 cut(s)	640, 1490, 1732, 1787, 1846, 2683, 2707
Sau96I	GGNCC	2 cut(s)	1399, 2613
ScaI	AGTACT	3 cut(s)	428, 1364, 2677
SchI	GAGTC	7 cut(s)	734, 1121, 1201, 1829, 1886, 1891, 2660
ScrFI	CCNGG	2 cut(s)	1975, 2273
SduI	GDGCHC	3 cut(s)	1075, 1582, 2660
SfcI	CTRYAG	2 cut(s)	341, 2770
SfoI	GGCGCC	1 cut(s)	2001
SinI	GGWCC	1 cut(s)	2613
SmiMI	CAYNNNNRTG	5 cut(s)	225, 554, 840, 2579, 2691
SmlI	CTYRAG	3 cut(s)	5, 613, 767
SmoI	CTYRAG	3 cut(s)	5, 613, 767
SsiI	CCGC	5 cut(s)	256, 1041, 1612, 2433, 2555
SspDI	GGCGCC	1 cut(s)	1999
SspI	AATATT	1 cut(s)	787
SspMI	CTAG	9 cut(s)	231, 240, 264, 354, 1191, 1541, 1676, 2604, 2661
SstI	GAGCTC	1 cut(s)	1075
StyD4I	CCNGG	2 cut(s)	1973, 2271
StyI	CCWWGG	3 cut(s)	11, 1725, 1791
TaaI	ACNGT	7 cut(s)	574, 832, 1120, 1421, 2123, 2680, 2801
TaiI	ACGT	2 cut(s)	186, 2075
TaqI	TCGA	2 cut(s)	1499, 1969
TatI	WGTACW	3 cut(s)	426, 1362, 2675
TauI	GCSGC	1 cut(s)	2436
TfiI	GAWTC	5 cut(s)	395, 878, 1181, 1597, 2095
Tru1I	TTAA	7 cut(s)	768, 1359, 1388, 1406, 1451, 1620, 1667
Tru9I	TTAA	7 cut(s)	768, 1359, 1388, 1406, 1451, 1620, 1667
TscAI	CASTG	5 cut(s)	508, 530, 837, 1451, 2251
TseFI	GTSAC	1 cut(s)	1878
TseI	GCWGC	3 cut(s)	258, 1958, 2359
Tsp45I	GTSAC	1 cut(s)	1878
TspDTI	ATGAA	7 cut(s)	209, 392, 957, 1023, 1262, 1674, 1848
TspGWI	ACGGA	1 cut(s)	1239
TspRI	CASTG	5 cut(s)	508, 530, 837, 1451, 2251
Tth111I	GACNNNGTC	1 cut(s)	743
Vha464I	CTTAAG	1 cut(s)	767
VpaK11BI	GGWCC	1 cut(s)	2613
VspI	ATTAAT	1 cut(s)	1620
XagI	CCTNNNNNAGG	1 cut(s)	752
XapI	RAATTY	2 cut(s)	1661, 2585
XbaI	TCTAGA	1 cut(s)	263
XceI	RCATGY	7 cut(s)	228, 339, 906, 1553, 1612, 1939, 2086
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1634
XmnI	GAANNNNTTC	3 cut(s)	399, 2543, 2779
XspI	CTAG	9 cut(s)	231, 240, 264, 354, 1191, 1541, 1676, 2604, 2661
ZrmI	AGTACT	3 cut(s)	428, 1364, 2677
Zsp2I	ATGCAT	3 cut(s)	226, 312, 2179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.