Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005444

Physical Location & Seq

Genomic Coordinates Reverse (-)

22161588 .. 22170288

Gene Structure 8701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g19290.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3000 bp

ATGCTTGAGCCAAGGGAAGCTGATATACCGGTCCTGTTTCTGGTTTTCGTTGTACTCCCTTTGGTTGCTTACGTTTTACTTGGAAAATGGAGTGAGTCATCAAAGAAGAGAGAGAGGGTAAGTTTGCTTTCTCAACTGGCTGCAGAAGAAGCTCTCAGAGCTGAAGCAATGACTGTTGCTGCTGTTATTCCTCCTGTGTCTTCCTCAAGTCCTTCAAAGAATGGACTTCAAGTATGTGCCAGATGCTATAGTACAGCTACAACCCGCTGCTCCAGATGCAAATCTGTCAGATATTGTTCTGGTAATTGTCAAATAATTCATTGGAGGGAAGTTCACAGGCAAGAATGCCTGCAGTTGGAACCTACTTGTTCAAGCTCATCTCCTAAGGCTGTCTCATTTGGAGAATCTTTTCATGAGAAGTTCTCACCTAATGACAGCATCAATTCACAGTACTTTGGGAGTAAGATGGAGCAGATTTTAGCGGAGCAAGCACCAGCTGATAATATAATTTATCCTTCAACAAGCACTGGTGTCCCTGATATGCTTGACTGTGCGTCGGTTGATACCTCTCAAGTTTCCGTGCCGGAGAGAAGAAGTGTGGACAAGCGGGTTTCCAGAAAGTCCCAGAGAGAATTAAGAAAAAAAGTTGGAGTTACATTTGATTCTTCTGAAGAAACATCTTTTGGTTGGACTACCCATTTGGGATCTTCTAATGTTAATTCATCAAAAGAGTTAAGAAATTATGACACCCAGTTAGCAGAGGAGTGCAATCCTATGATGCAAAATGTCAATATCTCTGATAGTTATATAAAAGGACAGGCTACTTCAAGAAATATGGTGCATGAGAATGATAAGTCTCAAGGTCAAAATGGCAACATATATGAATCAAGAAGCAACTCTGGATTAACATCCTCGGCATATTCTTCAAAAAGTGGAATAGATGTGCATGAAAATGGGTTGGACTTCATTCCAAATGGAGGAAATTCCCTTAAAGGGGAAATATTATCCAATGATGAAACAACAGATTTCAAATGTGCTGAAATGATGACAATGAAGGCTAGCATAAAGGTTAAAAGAGCTCCATATTCTCTTGGGAGAAAGGTGTCTAAATTGCCAAATTCAACAATGGAAGTCTCAGGAGAGCAGTGTTACTCAGAGATAGAGAGGCAGGGACATATTGCTGAGGATTCAAGTCAGTCTAGAATGAGAGACACCACTGCACAGGGGAGCAATGGAATTGCAAACAGTAGGATCATGAAGATGATGGGTCTAGAGAAGCCAAAGAACTTGACCAGACAGGAAGTCCCTGAAGTGAATGGTTACCGACAGAAAACTAAGAAGGTCCTGTTCCCTTATGATGAGTTTGTGAAGTACTTTCGGTGTGAAGTCTTTGACTTATCACCTCGGGGCCTTTTGAATTGTGGGAACAGTTGCTATGCAAATGCTGTCTTGCAGTGCTTAACCTGCACAAAGCCTCTCATTATCTATTTGCTTCGCAGATCACATTCAAGAGCCTGTTGTGGTAAAGATTGGTGTCTCATGTGTGAGCTGGAGCAACATGTGATGATGCTACGAGAAAGTGGGGGCCCACTTTCTCCTAGCAGAATTCTTTTTCATATGAGGAGTATCAATTGCCAAATTGGTGATGGAAGTCAAGAAGATGCACATGAATTCTTAAGGCTTCTAGTTACGTCAATGCAATCTATATGCTTGGAGGGGCTGGGTGGTGAAAACAAGGTTGATCCTAGATTGCAAGAAACAACTTTTATACAACATACATTTGGCGGACATCGATCAAAGGTCAAGTGTTTGAGATGTCATCATGAGTCGGAACGATATGAGAACATCATGGATCTTACCTTAGAGATATTTGGTTGGGTTGAATCACTTGAAGATGCGTTGACTCAGTTTACAACCCCTGAAGATTTGGATGGAGAAAATATGTACAGATGTGGAAGGAAGCAATTGAGCATACATGAGGCGCCAAATATCCTCACAATTGTCTTGAAGAGATTTCAGGAGGGAAAATATGGAAAAATAAACAAGTGCATCACTTTTCCAGACGTGCTGGATATGATTCCATTTATGACTGGAACGGGTGACATTCCTCCTCTTTACTTGCTCTATGGTGTTGTGGTGCATTTGGATACTCAGAATGCATCTTTCTCTGGACATTATGTGGCATATGTGAAAGATATGCGAGGCAATTGGTTCAGGATAGATGACACTGAGGTTCACCCCGTTTCAATGAGCCAGGTTATGATGGAAGGAGCATATATCTTATTTTACATGAGGTCCTGTCCCCGCCCTCACAGAGGATTTTCTGGAAAAGCTATCAGGGAGCAAGTTCCAAATTTAGAAAATCAATGCACATCGAAAGCTCAGAAGTCATGGCCAGGCCAAAGCAAACACAGCAGCCAATTTGCTAGTCCAGAGCATTTACCAGATGATATCAGGCCAGAGATTGCAAGTGGCTTTGGCAACAGCACCACTAATGGCATCCGTAGGAGTTCTAATGGGAATGTTTTCCCAATGATGGAAACATATGGTGAGCCCATGGGCGTGGAGTTCTCTGATGCTACGTCAAGTGATTGGTCCCTTTTTACAAGTTCTGATGAGGCCTCTTTCACGACTGAGAGTACTAGAGACTCTTTCAGTACTGTGGATTATGCCGATGCTTGCAATATGGATCCAATCTCTTCAATTTTCAACAAGTTATATGCACCGGAGTATTCTCGCATTCCGCACCGCCAGATCGACCCACCTAGATCGTCGCCGTCCCCGCATCGTACCAGACCCGGATCCCATCTGCTCGCCTGCCGCACCACCATCAATCCATCTGACCTTGGTCCTTCATCCTCCTCAGCCGCTTGCAGCTGCCTCGGTCCTCCTCCTCCTCTAAGATTATCAAAGCAATGGCTGAAGGTGAGGACGAATCCTTGGAGATTTGAGCTCCCCTGCTTTCAAAGAGATTGGATTGCTTTGGGGTGTGGGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

1000

Amino Acids

111.84

Weight (kDa)

6.93

Isoelectric Point (pI)

53.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17110 AT1G17110 AT1G17110
fragaria_vesca	FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820
malus_domestica	MD05G1206800.v1.1 MD10G1193900.v1.1
prunus_persica	Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1
pyrus_communis	pycom05g19290 pycom10g16770
rosa_chinensis	RchiOBHm_Chr5g0028031
rosa_laevigata	RLG00000033059
rosa_multiflora	Rmu_sc0009432.1_g000009
rosa_roxburghii	Rroxscaffold_1G00051630
rosa_rugosa	Rorug05G0103600
rosa_samantha	Rh5AG197200 Rh5BG195400 Rh5CG215600 Rh5DG197000
rosa_wichuraiana	Rw5G017980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1472
AccB1I	GGYRCC	1 cut(s)	1981
AclWI	GGATC	8 cut(s)	712, 1259, 1736, 1860, 2684, 2697, 2796, 2809
AcoI	YGGCCR	1 cut(s)	2393
AcsI	RAATTY	5 cut(s)	982, 1117, 1605, 1670, 2353
AcuI	CTGAAG	5 cut(s)	183, 690, 1329, 1941, 2942
AcyI	GRCGYC	1 cut(s)	1982
AfaI	GTAC	8 cut(s)	54, 253, 452, 1373, 1946, 2641, 2659, 2791
AfiI	CCNNNNNNNGG	7 cut(s)	40, 355, 977, 993, 994, 2315, 2536
AflII	CTTAAG	1 cut(s)	1675
AflIII	ACRYGT	1 cut(s)	1558
AgeI	ACCGGT	1 cut(s)	28
AhdI	GACNNNNNGTC	2 cut(s)	553, 1301
AjiI	CACGTC	1 cut(s)	2065
AjnI	CCWGG	2 cut(s)	2253, 2395
AjuI	GAANNNNNNNTTGG	2 cut(s)	666, 698
Alw21I	GWGCWC	2 cut(s)	1081, 2955
Alw26I	GTCTC	6 cut(s)	397, 861, 1138, 1203, 1541, 2640
AlwI	GGATC	8 cut(s)	712, 1259, 1736, 1860, 2684, 2697, 2796, 2809
Ama87I	CYCGRG	1 cut(s)	1404
AoxI	GGCC	6 cut(s)	1408, 1585, 2393, 2398, 2456, 2619
ApaI	GGGCCC	1 cut(s)	1589
ApeKI	GCWGC	6 cut(s)	140, 179, 267, 2415, 2874, 2877
ApoI	RAATTY	5 cut(s)	982, 1117, 1605, 1670, 2353
ArsI	GACNNNNNNTTYG	2 cut(s)	682, 714
AsiGI	ACCGGT	1 cut(s)	28
Asp700I	GAANNNNTTC	2 cut(s)	408, 2525
AspLEI	GCGC	1 cut(s)	1984
AspS9I	GGNCC	9 cut(s)	31, 1342, 1408, 1585, 1586, 2295, 2595, 2849, 2885
AsuC2I	CCSGG	1 cut(s)	2799
AsuHPI	GGTGA	8 cut(s)	417, 1392, 1655, 1739, 2111, 2228, 2561, 2938
AsuNHI	GCTAGC	1 cut(s)	1058
AvaI	CYCGRG	1 cut(s)	1404
AvaII	GGWCC	6 cut(s)	31, 1342, 2295, 2595, 2849, 2885
AxyI	CCTNAGG	1 cut(s)	384
BaeGI	GKGCMC	1 cut(s)	1589
BalI	TGGCCA	1 cut(s)	2395
BamHI	GGATCC	2 cut(s)	2689, 2801
BanI	GGYRCC	1 cut(s)	1981
BanII	GRGCYC	4 cut(s)	1081, 1589, 2556, 2955
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	2 cut(s)	1081, 2955
BbvCI	CCTCAGC	2 cut(s)	1182, 2863
BbvI	GCAGC	6 cut(s)	127, 166, 254, 2427, 2864, 2886
BccI	CCATC	9 cut(s)	460, 1258, 1640, 1925, 2257, 2530, 2814, 2837, 2845
BceAI	ACGGC	1 cut(s)	2761
BcgI	CGANNNNNNTGC	2 cut(s)	2863, 2897
BciT130I	CCWGG	2 cut(s)	2255, 2397
BciVI	GTATCC	1 cut(s)	2140
BcnI	CCSGG	1 cut(s)	2799
BcoDI	GTCTC	6 cut(s)	397, 861, 1138, 1203, 1541, 2640
BfaI	CTAG	9 cut(s)	1059, 1200, 1271, 1599, 1685, 1746, 2427, 2643, 2766
BfmI	CTRYAG	3 cut(s)	141, 247, 350
BfoI	RGCGCY	1 cut(s)	1985
BfrI	CTTAAG	1 cut(s)	1675
BfuAI	ACCTGC	1 cut(s)	1472
BfuI	GTATCC	1 cut(s)	2140
BisI	GCNGC	8 cut(s)	141, 180, 268, 2416, 2821, 2868, 2875, 2878
BlsI	GCNGC	8 cut(s)	142, 181, 269, 2417, 2822, 2869, 2876, 2879
BmcAI	AGTACT	4 cut(s)	452, 1373, 2641, 2659
Bme1390I	CCNGG	3 cut(s)	2255, 2397, 2799
Bme18I	GGWCC	6 cut(s)	31, 1342, 2295, 2595, 2849, 2885
BmeRI	GACNNNNNGTC	2 cut(s)	553, 1301
BmeT110I	CYCGRG	1 cut(s)	1404
BmgBI	CACGTC	1 cut(s)	2065
BmgT120I	GGNCC	9 cut(s)	31, 1342, 1408, 1585, 1586, 2295, 2595, 2849, 2885
BmiI	GGNNCC	8 cut(s)	360, 1409, 1586, 1587, 1983, 2597, 2691, 2803
BmrFI	CCNGG	3 cut(s)	2255, 2397, 2799
BmrI	ACTGGG	1 cut(s)	745
BmtI	GCTAGC	1 cut(s)	1062
BmuI	ACTGGG	1 cut(s)	745
BoxI	GACNNNNGTC	1 cut(s)	2847
BpiI	GAAGAC	1 cut(s)	192
BplI	GAGNNNNNCTC	2 cut(s)	407, 439
BpmI	CTGGAG	2 cut(s)	256, 1571
Bpu10I	CCTNAGC	2 cut(s)	1182, 2863
BpuEI	CTTGAG	4 cut(s)	26, 190, 555, 843
BpuMI	CCSGG	1 cut(s)	2799
Bsa29I	ATCGAT	1 cut(s)	1792
BsaBI	GATNNNNATC	2 cut(s)	280, 907
BsaHI	GRCGYC	1 cut(s)	1982
BsaJI	CCNNGG	7 cut(s)	11, 912, 1403, 2556, 2845, 2881, 2939
BsaWI	WCCGGW	2 cut(s)	28, 2725
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 355, 977, 993, 994, 2315, 2536
Bse118I	RCCGGY	1 cut(s)	28
Bse1I	ACTGG	4 cut(s)	141, 532, 751, 2095
Bse21I	CCTNAGG	1 cut(s)	384
Bse3DI	GCAATG	3 cut(s)	174, 1237, 2921
Bse8I	GATNNNNATC	2 cut(s)	280, 907
BseBI	CCWGG	2 cut(s)	2255, 2397
BseCI	ATCGAT	1 cut(s)	1792
BseDI	CCNNGG	7 cut(s)	11, 912, 1403, 2556, 2845, 2881, 2939
BseGI	GGATG	4 cut(s)	908, 1936, 2499, 2855
BseJI	GATNNNNATC	2 cut(s)	280, 907
BseLI	CCNNNNNNNGG	7 cut(s)	40, 355, 977, 993, 994, 2315, 2536
BseMI	GCAATG	3 cut(s)	174, 1237, 2921
BseNI	ACTGG	4 cut(s)	141, 532, 751, 2095
BseRI	GAGGAG	7 cut(s)	776, 1636, 2100, 2851, 2880, 2883, 2886
BseSI	GKGCMC	1 cut(s)	1589
BseXI	GCAGC	6 cut(s)	127, 166, 254, 2427, 2864, 2886
BseYI	CCCAGC	1 cut(s)	1720
BsgI	GTGCAG	2 cut(s)	1203, 1450
BshFI	GGCC	6 cut(s)	1410, 1587, 2395, 2400, 2458, 2621
BshNI	GGYRCC	1 cut(s)	1981
BshTI	ACCGGT	1 cut(s)	28
BshVI	ATCGAT	1 cut(s)	1792
BsiHKAI	GWGCWC	2 cut(s)	1081, 2955
BsiHKCI	CYCGRG	1 cut(s)	1404
BsiSI	CCGG	4 cut(s)	29, 584, 2726, 2799
BslFI	GGGAC	7 cut(s)	518, 607, 1185, 1289, 2286, 2581, 2764
BslI	CCNNNNNNNGG	7 cut(s)	40, 355, 977, 993, 994, 2315, 2536
BsmAI	GTCTC	6 cut(s)	397, 861, 1138, 1203, 1541, 2640
BsmFI	GGGAC	7 cut(s)	518, 607, 1185, 1289, 2286, 2581, 2764
BsmI	GAATGC	3 cut(s)	350, 2161, 2739
BsnI	GGCC	6 cut(s)	1410, 1587, 2395, 2400, 2458, 2621
BsoBI	CYCGRG	1 cut(s)	1404
Bsp120I	GGGCCC	1 cut(s)	1585
Bsp1286I	GDGCHC	4 cut(s)	1081, 1589, 2556, 2955
Bsp1407I	TGTACA	1 cut(s)	1944
Bsp19I	CCATGG	1 cut(s)	2556
BspANI	GGCC	6 cut(s)	1410, 1587, 2395, 2400, 2458, 2621
BspDI	ATCGAT	1 cut(s)	1792
BspHI	TCATGA	3 cut(s)	412, 1254, 1822
BspLI	GGNNCC	8 cut(s)	360, 1409, 1586, 1587, 1983, 2597, 2691, 2803
BspMAI	CTGCAG	2 cut(s)	145, 354
BspMI	ACCTGC	1 cut(s)	1472
BspOI	GCTAGC	1 cut(s)	1062
BspPI	GGATC	8 cut(s)	712, 1259, 1736, 1860, 2684, 2697, 2796, 2809
BspT107I	GGYRCC	1 cut(s)	1981
BspTI	CTTAAG	1 cut(s)	1675
BsrDI	GCAATG	3 cut(s)	174, 1237, 2921
BsrFI	RCCGGY	1 cut(s)	28
BsrGI	TGTACA	1 cut(s)	1944
BsrI	ACTGG	4 cut(s)	141, 532, 751, 2095
BssAI	RCCGGY	1 cut(s)	28
BssECI	CCNNGG	7 cut(s)	11, 912, 1403, 2556, 2845, 2881, 2939
BssNI	GRCGYC	1 cut(s)	1982
BssT1I	CCWWGG	4 cut(s)	11, 2556, 2845, 2939
Bst2UI	CCWGG	2 cut(s)	2255, 2397
Bst4CI	ACNGT	6 cut(s)	175, 450, 551, 1247, 1430, 2662
Bst6I	CTCTTC	3 cut(s)	101, 2003, 2704
BstACI	GRCGYC	1 cut(s)	1982
BstAFI	CTTAAG	1 cut(s)	1675
BstAUI	TGTACA	1 cut(s)	1944
BstC8I	GCNNGC	7 cut(s)	350, 489, 1060, 2680, 2814, 2818, 2872
BstDSI	CCRYGG	1 cut(s)	2556
BstEII	GGTNACC	1 cut(s)	1319
BstENI	CCTNNNNNAGG	1 cut(s)	2313
BstF5I	GGATG	4 cut(s)	908, 1936, 2499, 2855
BstH2I	RGCGCY	1 cut(s)	1985
BstHHI	GCGC	1 cut(s)	1984
BstMAI	GTCTC	6 cut(s)	397, 861, 1138, 1203, 1541, 2640
BstMWI	GCNNNNNNNGC	7 cut(s)	149, 158, 276, 488, 1464, 2412, 2782
BstNI	CCWGG	2 cut(s)	2255, 2397
BstNSI	RCATGY	1 cut(s)	1562
BstPAI	GACNNNNGTC	1 cut(s)	2847
BstPI	GGTNACC	1 cut(s)	1319
BstSCI	CCNGG	3 cut(s)	2253, 2395, 2797
BstSFI	CTRYAG	3 cut(s)	141, 247, 350
BstSLI	GKGCMC	1 cut(s)	1589
BstV1I	GCAGC	6 cut(s)	127, 166, 254, 2427, 2864, 2886
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	4 cut(s)	704, 1852, 2689, 2801
BstXI	CCANNNNNNTGG	1 cut(s)	2563
BstYI	RGATCY	4 cut(s)	704, 1852, 2689, 2801
Bsu15I	ATCGAT	1 cut(s)	1792
Bsu36I	CCTNAGG	1 cut(s)	384
BsuI	GTATCC	1 cut(s)	2140
BsuRI	GGCC	6 cut(s)	1410, 1587, 2395, 2400, 2458, 2621
BsuTUI	ATCGAT	1 cut(s)	1792
BtgI	CCRYGG	1 cut(s)	2556
BtrI	CACGTC	1 cut(s)	2065
BtsCI	GGATG	4 cut(s)	908, 1936, 2499, 2855
BtsI	GCAGTG	3 cut(s)	1151, 1215, 1460
BtsIMutI	CAGTG	5 cut(s)	525, 1151, 1215, 1460, 2226
BveI	ACCTGC	1 cut(s)	1472
Cac8I	GCNNGC	7 cut(s)	350, 489, 1060, 2680, 2814, 2818, 2872
CciI	TCATGA	3 cut(s)	412, 1254, 1822
CfoI	GCGC	1 cut(s)	1984
Cfr10I	RCCGGY	1 cut(s)	28
Cfr13I	GGNCC	9 cut(s)	31, 1342, 1408, 1585, 1586, 2295, 2595, 2849, 2885
ClaI	ATCGAT	1 cut(s)	1792
CseI	GACGC	1 cut(s)	543
Csp6I	GTAC	8 cut(s)	53, 252, 451, 1372, 1945, 2640, 2658, 2790
CspAI	ACCGGT	1 cut(s)	28
CviQI	GTAC	8 cut(s)	53, 252, 451, 1372, 1945, 2640, 2658, 2790
DinI	GGCGCC	1 cut(s)	1983
DriI	GACNNNNNGTC	2 cut(s)	553, 1301
EaeI	YGGCCR	1 cut(s)	2393
Eam1104I	CTCTTC	3 cut(s)	101, 2003, 2704
Eam1105I	GACNNNNNGTC	2 cut(s)	553, 1301
EarI	CTCTTC	3 cut(s)	101, 2003, 2704
EciI	GGCGGA	1 cut(s)	1800
Ecl136II	GAGCTC	2 cut(s)	1079, 2953
Eco130I	CCWWGG	4 cut(s)	11, 2556, 2845, 2939
Eco147I	AGGCCT	1 cut(s)	2621
Eco24I	GRGCYC	4 cut(s)	1081, 1589, 2556, 2955
Eco32I	GATATC	1 cut(s)	2452
Eco47I	GGWCC	6 cut(s)	31, 1342, 2295, 2595, 2849, 2885
Eco53kI	GAGCTC	2 cut(s)	1079, 2953
Eco57I	CTGAAG	5 cut(s)	183, 690, 1329, 1941, 2942
Eco81I	CCTNAGG	1 cut(s)	384
Eco88I	CYCGRG	1 cut(s)	1404
Eco91I	GGTNACC	1 cut(s)	1319
EcoICRI	GAGCTC	2 cut(s)	1079, 2953
EcoNI	CCTNNNNNAGG	1 cut(s)	2313
EcoO109I	RGGNCCY	4 cut(s)	1342, 1408, 1585, 2295
EcoO65I	GGTNACC	1 cut(s)	1319
EcoRI	GAATTC	2 cut(s)	1605, 1670
EcoRII	CCWGG	2 cut(s)	2253, 2395
EcoRV	GATATC	1 cut(s)	2452
EcoT14I	CCWWGG	4 cut(s)	11, 2556, 2845, 2939
EcoT22I	ATGCAT	1 cut(s)	2161
EcoT38I	GRGCYC	4 cut(s)	1081, 1589, 2556, 2955
EgeI	GGCGCC	1 cut(s)	1983
EheI	GGCGCC	1 cut(s)	1983
ErhI	CCWWGG	4 cut(s)	11, 2556, 2845, 2939
FaqI	GGGAC	7 cut(s)	518, 607, 1185, 1289, 2286, 2581, 2764
FauI	CCCGC	4 cut(s)	272, 600, 2312, 2790
FauNDI	CATATG	3 cut(s)	1617, 2185, 2545
Fnu4HI	GCNGC	8 cut(s)	141, 180, 268, 2416, 2821, 2868, 2875, 2878
FokI	GGATG	4 cut(s)	895, 1943, 2486, 2842
FriOI	GRGCYC	4 cut(s)	1081, 1589, 2556, 2955
Fsp4HI	GCNGC	8 cut(s)	141, 180, 268, 2416, 2821, 2868, 2875, 2878
FspBI	CTAG	9 cut(s)	1059, 1200, 1271, 1599, 1685, 1746, 2427, 2643, 2766
GlaI	GCGC	1 cut(s)	1983
GluI	GCNGC	8 cut(s)	141, 180, 268, 2416, 2821, 2868, 2875, 2878
GsaI	CCCAGC	1 cut(s)	1724
GsuI	CTGGAG	2 cut(s)	256, 1571
HaeII	RGCGCY	1 cut(s)	1985
HaeIII	GGCC	6 cut(s)	1410, 1587, 2395, 2400, 2458, 2621
HapII	CCGG	4 cut(s)	29, 584, 2726, 2799
HgaI	GACGC	1 cut(s)	543
HhaI	GCGC	1 cut(s)	1984
Hin1I	GRCGYC	1 cut(s)	1982
Hin6I	GCGC	1 cut(s)	1982
HinP1I	GCGC	1 cut(s)	1982
HincII	GTYRAC	1 cut(s)	1902
HindII	GTYRAC	1 cut(s)	1902
HpaII	CCGG	4 cut(s)	29, 584, 2726, 2799
HphI	GGTGA	8 cut(s)	417, 1392, 1655, 1739, 2111, 2228, 2561, 2938
Hpy166II	GTNNAC	5 cut(s)	334, 601, 1902, 1911, 2236
Hpy8I	GTNNAC	5 cut(s)	334, 601, 1902, 1911, 2236
Hpy99I	CGWCG	2 cut(s)	559, 2776
HpyAV	CCTTC	8 cut(s)	222, 525, 1048, 1333, 1950, 2261, 2862, 2917
HpyCH4III	ACNGT	6 cut(s)	175, 450, 551, 1247, 1430, 2662
HpyCH4IV	ACGT	4 cut(s)	72, 1691, 2064, 2582
HpyF10VI	GCNNNNNNNGC	7 cut(s)	149, 158, 276, 488, 1464, 2412, 2782
HpySE526I	ACGT	4 cut(s)	72, 1691, 2064, 2582
Hsp92I	GRCGYC	1 cut(s)	1982
HspAI	GCGC	1 cut(s)	1982
KasI	GGCGCC	1 cut(s)	1981
LmnI	GCTCC	9 cut(s)	275, 469, 484, 1084, 1227, 1552, 2270, 2341, 2958
Lsp1109I	GCAGC	6 cut(s)	127, 166, 254, 2427, 2864, 2886
MaeI	CTAG	9 cut(s)	1059, 1200, 1271, 1599, 1685, 1746, 2427, 2643, 2766
MaeII	ACGT	4 cut(s)	72, 1691, 2064, 2582
MaeIII	GTNAC	5 cut(s)	652, 1148, 1319, 1687, 2099
MfeI	CAATTG	4 cut(s)	1630, 1964, 1998, 2206
MflI	RGATCY	4 cut(s)	704, 1852, 2689, 2801
MhlI	GDGCHC	4 cut(s)	1081, 1589, 2556, 2955
MlsI	TGGCCA	1 cut(s)	2395
MluNI	TGGCCA	1 cut(s)	2395
Mly113I	GGCGCC	1 cut(s)	1982
MlyI	GAGTC	4 cut(s)	104, 1835, 1897, 2642
MmeI	TCCRAC	5 cut(s)	336, 628, 668, 939, 1809
Mox20I	TGGCCA	1 cut(s)	2395
Mph1103I	ATGCAT	1 cut(s)	2161
MroXI	GAANNNNTTC	2 cut(s)	408, 2525
MscI	TGGCCA	1 cut(s)	2395
MseI	TTAA	8 cut(s)	635, 717, 734, 905, 990, 1071, 1460, 1676
MslI	CAYNNNNRTG	4 cut(s)	846, 951, 1259, 2561
Msp20I	TGGCCA	1 cut(s)	2395
MspA1I	CMGCKG	3 cut(s)	267, 497, 2877
MspCI	CTTAAG	1 cut(s)	1675
MspI	CCGG	4 cut(s)	29, 584, 2726, 2799
MspR9I	CCNGG	3 cut(s)	2255, 2397, 2799
MunI	CAATTG	4 cut(s)	1630, 1964, 1998, 2206
Mva1269I	GAATGC	3 cut(s)	350, 2161, 2739
MvaI	CCWGG	2 cut(s)	2255, 2397
MwoI	GCNNNNNNNGC	7 cut(s)	149, 158, 276, 488, 1464, 2412, 2782
NarI	GGCGCC	1 cut(s)	1982
NciI	CCSGG	1 cut(s)	2799
NcoI	CCATGG	1 cut(s)	2556
NdeI	CATATG	3 cut(s)	1617, 2185, 2545
NheI	GCTAGC	1 cut(s)	1058
NlaIV	GGNNCC	8 cut(s)	360, 1409, 1586, 1587, 1983, 2597, 2691, 2803
NmeAIII	GCCGAG	1 cut(s)	893
NmuCI	GTSAC	1 cut(s)	2099
NsiI	ATGCAT	1 cut(s)	2161
NspI	RCATGY	1 cut(s)	1562
PagI	TCATGA	3 cut(s)	412, 1254, 1822
PceI	AGGCCT	1 cut(s)	2621
PciI	ACATGT	1 cut(s)	1558
PctI	GAATGC	3 cut(s)	350, 2161, 2739
PdmI	GAANNNNTTC	2 cut(s)	408, 2525
PfeI	GAWTC	7 cut(s)	404, 662, 884, 1187, 1883, 2077, 2935
PinAI	ACCGGT	1 cut(s)	28
PkrI	GCNGC	8 cut(s)	142, 181, 269, 2417, 2822, 2869, 2876, 2879
PleI	GAGTC	4 cut(s)	103, 1834, 1897, 2642
PluTI	GGCGCC	1 cut(s)	1985
PpsI	GAGTC	4 cut(s)	103, 1834, 1897, 2642
PpuMI	RGGWCCY	2 cut(s)	1342, 2295
PscI	ACATGT	1 cut(s)	1558
PshAI	GACNNNNGTC	1 cut(s)	2847
Psp124BI	GAGCTC	2 cut(s)	1081, 2955
Psp5II	RGGWCCY	2 cut(s)	1342, 2295
Psp6I	CCWGG	2 cut(s)	2253, 2395
PspEI	GGTNACC	1 cut(s)	1319
PspFI	CCCAGC	1 cut(s)	1720
PspGI	CCWGG	2 cut(s)	2253, 2395
PspN4I	GGNNCC	8 cut(s)	360, 1409, 1586, 1587, 1983, 2597, 2691, 2803
PspOMI	GGGCCC	1 cut(s)	1585
PspPI	GGNCC	9 cut(s)	31, 1342, 1408, 1585, 1586, 2295, 2595, 2849, 2885
PspPPI	RGGWCCY	2 cut(s)	1342, 2295
PstI	CTGCAG	2 cut(s)	145, 354
PsuI	RGATCY	4 cut(s)	704, 1852, 2689, 2801
PvuII	CAGCTG	2 cut(s)	497, 2877
RsaI	GTAC	8 cut(s)	54, 253, 452, 1373, 1946, 2641, 2659, 2791
RsaNI	GTAC	8 cut(s)	53, 252, 451, 1372, 1945, 2640, 2658, 2790
RseI	CAYNNNNRTG	4 cut(s)	846, 951, 1259, 2561
SacI	GAGCTC	2 cut(s)	1081, 2955
SaqAI	TTAA	8 cut(s)	635, 717, 734, 905, 990, 1071, 1460, 1676
SatI	GCNGC	8 cut(s)	141, 180, 268, 2416, 2821, 2868, 2875, 2878
Sau96I	GGNCC	9 cut(s)	31, 1342, 1408, 1585, 1586, 2295, 2595, 2849, 2885
ScaI	AGTACT	4 cut(s)	452, 1373, 2641, 2659
SchI	GAGTC	4 cut(s)	104, 1835, 1897, 2642
ScrFI	CCNGG	3 cut(s)	2255, 2397, 2799
SduI	GDGCHC	4 cut(s)	1081, 1589, 2556, 2955
SfcI	CTRYAG	3 cut(s)	141, 247, 350
SfoI	GGCGCC	1 cut(s)	1983
SinI	GGWCC	6 cut(s)	31, 1342, 2295, 2595, 2849, 2885
SmiMI	CAYNNNNRTG	4 cut(s)	846, 951, 1259, 2561
SmlI	CTYRAG	5 cut(s)	5, 205, 570, 858, 1675
SmoI	CTYRAG	5 cut(s)	5, 205, 570, 858, 1675
SseBI	AGGCCT	1 cut(s)	2621
SspDI	GGCGCC	1 cut(s)	1981
SspI	AATATT	1 cut(s)	1002
SspMI	CTAG	9 cut(s)	1059, 1200, 1271, 1599, 1685, 1746, 2427, 2643, 2766
SstI	GAGCTC	2 cut(s)	1081, 2955
StuI	AGGCCT	1 cut(s)	2621
StyD4I	CCNGG	3 cut(s)	2253, 2395, 2797
StyI	CCWWGG	4 cut(s)	11, 2556, 2845, 2939
TaaI	ACNGT	6 cut(s)	175, 450, 551, 1247, 1430, 2662
TaiI	ACGT	4 cut(s)	75, 1694, 2067, 2585
TaqI	TCGA	3 cut(s)	1792, 2375, 2757
TaqII	GACCGA	1 cut(s)	2873
TatI	WGTACW	7 cut(s)	52, 251, 450, 1371, 1944, 2639, 2657
TauI	GCSGC	2 cut(s)	2823, 2870
TfiI	GAWTC	7 cut(s)	404, 662, 884, 1187, 1883, 2077, 2935
Tru1I	TTAA	8 cut(s)	635, 717, 734, 905, 990, 1071, 1460, 1676
Tru9I	TTAA	8 cut(s)	635, 717, 734, 905, 990, 1071, 1460, 1676
TscAI	CASTG	5 cut(s)	532, 1151, 1222, 1460, 2233
TseFI	GTSAC	1 cut(s)	2099
TseI	GCWGC	6 cut(s)	140, 179, 267, 2415, 2874, 2877
Tsp45I	GTSAC	1 cut(s)	2099
TspGWI	ACGGA	2 cut(s)	568, 2492
TspRI	CASTG	5 cut(s)	532, 1151, 1222, 1460, 2233
Vha464I	CTTAAG	1 cut(s)	1675
VpaK11BI	GGWCC	6 cut(s)	31, 1342, 2295, 2595, 2849, 2885
XagI	CCTNNNNNAGG	1 cut(s)	2313
XapI	RAATTY	5 cut(s)	982, 1117, 1605, 1670, 2353
XbaI	TCTAGA	2 cut(s)	1199, 1270
XceI	RCATGY	1 cut(s)	1562
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1643
XmnI	GAANNNNTTC	2 cut(s)	408, 2525
XspI	CTAG	9 cut(s)	1059, 1200, 1271, 1599, 1685, 1746, 2427, 2643, 2766
ZrmI	AGTACT	4 cut(s)	452, 1373, 2641, 2659
Zsp2I	ATGCAT	1 cut(s)	2161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.