AT1G19700

BEL1-like homeodomain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
6809585 .. 6813063
3479 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19700.3

Sequence Viewer

Length: 1617 bp
ATGGCAGTTTATTACACAAGTAATGTCGGTTGTTACCAGCAAGAACCAATCTTTCTCAACCATCAACAACAAAACCAACAAGCTTCTTCTTCATCCGCCGCCGCTTCTTTCACCGTCACCGGCGGCGATACTGTTCGAAACGAGATGGTTTTTATCCCACCAACCACCACAGGAGACGTTGTAACAGGAAACGGTACCGTTTCAAGCAGCGATCTAAGCTTTCACGATGGTCAAGGACTGTCTTTGAGCCTTGGTACTCAGATCTCTGTTGCTCCGTTTCACTTTCATCAATACCAATTGGGGTTTACTAGTCAGAATCCTTCAATTTCAGTCAAGGAAACGTCACCGTTTCATGTGGATGAGATGAGTGTGAAGAGCAAAGAAATGATCTTGTTGGGTCAATCTGATCCTTCCTCTGGTTATGCTGGTAATGGTGGGAATGGCTTCTACAACAATTATCGGTATAATGAGACATCAGGAGGGTTTATGAGCAGCGTTCTGCGTTCTCGGTATCTTAAACCTGCTCAGAATTTGCTTGATGAAGTGGTTAGTGTCAAGAAAGAACTAAACCAAATGGGGAAGAAGAAGATGAAAGTTAATGACTTTAACAGTGGTTCTAAGGAGATAGAAGGAGGAGGTGGTGAGTTATCGAGTGATTCGAATGGGAAATCGATTGAGTTATCTACAATTGAACGTGAAGAGCTTCAGAACAAGAAGAACAAGCTTTTAACAATGGTTGATGAGGTAGATAAAAGATATAACCAATATTACCATCAAATGGAAGCATTAGCTTCATCATTTGAGATAGTAGCAGGACTTGGATCAGCTAAGCCTTACACATCAGTTGCTCTCAACAGAATCTCTCGCCATTTTCGTGCTCTTCGCGACGCAATAAAGGAACAAATTCAGATTGTTAGAGAAAAACTTGGGGAGAAAGGAGGAGAGTCGTTGGATGAGCAACAAGGAGAGAGGATACCAAGGTTGAGGTATTTAGATCAACGGTTGAGACAGCAAAGAGCTTTGCATCAACAGCTTGGAATGGTTCGACCTGCTTGGAGACCTCAAAGAGGTCTTCCTGAAAACTCTGTCTCTGTTCTTCGCGCTTGGCTCTTTGAACATTTCCTTCATCCATATCCGAAAGAATCTGAGAAAATCATGCTTGCAAAGCAGACAGGATTGTCAAAGAACCAGGTTGCTAATTGGTTCATAAACGCGAGAGTTCGTCTGTGGAAACCGATGATCGAAGAAATGTATAAAGAAGAGTTTGGTGATGAATCTGAGTTACTAATCTCCAAATCTTCCCAAGAACCCAACAGCACAAACCAAGAAGACTCCTCATCGCAGCAGCAGCAGCAGCAAGAGAACAACAACAACAGCAACCTCGCTTATTCATCTGCAGACACAACAAACATTGTCTTCTCATCAGAAACCAAACCAGATCGTGTTCTAGGCAATGATAACGACCCACAGCAACAACAGATAAACCGCTCATCGGATTACGACACTCTGATGAACTATCACGGGTTTGGTGTTGATGATTACCGTTACATTAGCGGAAGCAACCAGCAAGAAAGCAGATTCTCCAATTCCCATCACTTACACGACTTTGTTGTGTGA

Protein Analysis

538

Amino Acids

60.64

Weight (kDa)

5.92

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
POX PF07526 166 - 298 4.8e-47 Associated with HOX
Homeobox_KN PF05920 369 - 408 3.9e-19 Homeobox KN domain
Homeodomain PF00046 376 - 408 1.8e-07 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1177
Acc36I ACCTGC 2 cut(s) 529, 1057
Acc65I GGTACC 1 cut(s) 194
AccB1I GGYRCC 1 cut(s) 194
AccB7I CCANNNNNTGG 1 cut(s) 778
AccBSI CCGCTC 1 cut(s) 1488
AccII CGCG 3 cut(s) 885, 1101, 1214
AciI CCGC 6 cut(s) 96, 99, 102, 123, 1486, 1554
AclWI GGATC 2 cut(s) 401, 829
AcsI RAATTY 2 cut(s) 529, 903
AcuI CTGAAG 1 cut(s) 689
AfaI GTAC 2 cut(s) 196, 256
AfiI CCNNNNNNNGG 4 cut(s) 416, 778, 1067, 1492
AgsI TTSAA 4 cut(s) 204, 324, 692, 1115
AhlI ACTAGT 1 cut(s) 308
AjnI CCWGG 1 cut(s) 1188
AluBI AGCT 8 cut(s) 83, 219, 703, 724, 791, 827, 1019, 1033
AluI AGCT 8 cut(s) 83, 219, 703, 724, 791, 827, 1019, 1033
Alw21I GWGCWC 1 cut(s) 880
Alw26I GTCTC 5 cut(s) 168, 464, 1000, 1051, 1093
AlwI GGATC 2 cut(s) 401, 829
ApeKI GCWGC 7 cut(s) 207, 492, 1342, 1345, 1348, 1351, 1354
ApoI RAATTY 2 cut(s) 529, 903
Asp700I GAANNNNTTC 3 cut(s) 443, 702, 903
Asp718I GGTACC 1 cut(s) 194
AspLEI GCGC 1 cut(s) 1103
AsuHPI GGTGA 5 cut(s) 103, 109, 336, 653, 1280
AsuII TTCGAA 2 cut(s) 136, 659
BaeI ACNNNNGTAYC 2 cut(s) 965, 998
BanI GGYRCC 1 cut(s) 194
BbsI GAAGAC 3 cut(s) 1064, 1335, 1408
Bbv12I GWGCWC 1 cut(s) 880
BbvI GCAGC 7 cut(s) 219, 504, 1354, 1357, 1360, 1363, 1366
BccI CCATC 5 cut(s) 69, 139, 221, 780, 1599
BciT130I CCWGG 1 cut(s) 1190
BciVI GTATCC 1 cut(s) 966
BcoDI GTCTC 5 cut(s) 168, 464, 1000, 1051, 1093
BcuI ACTAGT 1 cut(s) 308
BfaI CTAG 2 cut(s) 309, 1448
BfmI CTRYAG 1 cut(s) 1395
BfuAI ACCTGC 2 cut(s) 529, 1057
BfuI GTATCC 1 cut(s) 966
BglII AGATCT 1 cut(s) 261
BlpI GCTNAGC 1 cut(s) 828
Bme1390I CCNGG 1 cut(s) 1190
BmiI GGNNCC 1 cut(s) 196
BmrFI CCNGG 1 cut(s) 1190
BmsI GCATC 1 cut(s) 1033
BpiI GAAGAC 3 cut(s) 1064, 1335, 1408
Bpu1102I GCTNAGC 1 cut(s) 828
Bpu14I TTCGAA 2 cut(s) 136, 659
Bsa29I ATCGAT 1 cut(s) 671
BsaI GGTCTC 1 cut(s) 1051
BsaJI CCNNGG 2 cut(s) 250, 977
BsaXI ACNNNNNCTCC 2 cut(s) 165, 195
Bsc4I CCNNNNNNNGG 4 cut(s) 416, 778, 1067, 1492
Bse118I RCCGGY 1 cut(s) 119
Bse3DI GCAATG 1 cut(s) 1459
BseBI CCWGG 1 cut(s) 1190
BseCI ATCGAT 1 cut(s) 671
BseDI CCNNGG 2 cut(s) 250, 977
BseGI GGATG 4 cut(s) 92, 364, 958, 1126
BseLI CCNNNNNNNGG 4 cut(s) 416, 778, 1067, 1492
BseMI GCAATG 1 cut(s) 1459
BseMII CTCAG 4 cut(s) 272, 539, 1137, 1269
BseRI GAGGAG 3 cut(s) 648, 954, 1324
BseXI GCAGC 7 cut(s) 219, 504, 1354, 1357, 1360, 1363, 1366
Bsh1236I CGCG 3 cut(s) 885, 1101, 1214
BshNI GGYRCC 1 cut(s) 194
BshVI ATCGAT 1 cut(s) 671
BsiHKAI GWGCWC 1 cut(s) 880
BsiSI CCGG 1 cut(s) 120
BslI CCNNNNNNNGG 4 cut(s) 416, 778, 1067, 1492
BsmAI GTCTC 5 cut(s) 168, 464, 1000, 1051, 1093
BsmBI CGTCTC 1 cut(s) 168
Bso31I GGTCTC 1 cut(s) 1051
Bsp119I TTCGAA 2 cut(s) 136, 659
Bsp1286I GDGCHC 1 cut(s) 880
Bsp143I GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
Bsp1720I GCTNAGC 1 cut(s) 828
Bsp68I TCGCGA 1 cut(s) 885
BspACI CCGC 6 cut(s) 96, 99, 102, 123, 1486, 1554
BspCNI CTCAG 4 cut(s) 271, 538, 1138, 1270
BspDI ATCGAT 1 cut(s) 671
BspFNI CGCG 3 cut(s) 885, 1101, 1214
BspLI GGNNCC 1 cut(s) 196
BspMAI CTGCAG 1 cut(s) 1399
BspMI ACCTGC 2 cut(s) 529, 1057
BspPI GGATC 2 cut(s) 401, 829
BspQI GCTCTTC 3 cut(s) 368, 693, 885
BspT104I TTCGAA 2 cut(s) 136, 659
BspT107I GGYRCC 1 cut(s) 194
BspTNI GGTCTC 1 cut(s) 1051
BsrBI CCGCTC 1 cut(s) 1488
BsrDI GCAATG 1 cut(s) 1459
BsrFI RCCGGY 1 cut(s) 119
BssAI RCCGGY 1 cut(s) 119
BssECI CCNNGG 2 cut(s) 250, 977
BssMI GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
BssT1I CCWWGG 2 cut(s) 250, 977
Bst2UI CCWGG 1 cut(s) 1190
Bst4CI ACNGT 9 cut(s) 115, 133, 194, 199, 240, 348, 611, 1002, 1544
Bst6I CTCTTC 4 cut(s) 368, 693, 885, 1254
BstBI TTCGAA 2 cut(s) 136, 659
BstC8I GCNNGC 1 cut(s) 1161
BstDEI CTNAG 7 cut(s) 215, 258, 525, 618, 828, 1146, 1278
BstENI CCTNNNNNAGG 1 cut(s) 1065
BstF5I GGATG 4 cut(s) 92, 364, 958, 1126
BstFNI CGCG 3 cut(s) 885, 1101, 1214
BstHHI GCGC 1 cut(s) 1103
BstKTI GATC 8 cut(s) 214, 264, 390, 409, 824, 997, 1242, 1441
BstMAI GTCTC 5 cut(s) 168, 464, 1000, 1051, 1093
BstMBI GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
BstMWI GCNNNNNNNGC 6 cut(s) 216, 1030, 1165, 1348, 1351, 1354
BstNI CCWGG 1 cut(s) 1190
BstSCI CCNGG 1 cut(s) 1188
BstSFI CTRYAG 1 cut(s) 1395
BstUI CGCG 3 cut(s) 885, 1101, 1214
BstV1I GCAGC 7 cut(s) 219, 504, 1354, 1357, 1360, 1363, 1366
BstV2I GAAGAC 3 cut(s) 1064, 1335, 1408
BstX2I RGATCY 1 cut(s) 261
BstYI RGATCY 1 cut(s) 261
Bsu15I ATCGAT 1 cut(s) 671
BsuI GTATCC 1 cut(s) 966
BsuTUI ATCGAT 1 cut(s) 671
BtgZI GCGATG 1 cut(s) 1323
BtsCI GGATG 4 cut(s) 92, 364, 958, 1126
BtsIMutI CAGTG 1 cut(s) 616
BtuMI TCGCGA 1 cut(s) 885
BveI ACCTGC 2 cut(s) 529, 1057
Cac8I GCNNGC 1 cut(s) 1161
CfoI GCGC 1 cut(s) 1103
Cfr10I RCCGGY 1 cut(s) 119
ClaI ATCGAT 1 cut(s) 671
CseI GACGC 1 cut(s) 896
CsiI ACCWGGT 1 cut(s) 1188
Csp6I GTAC 2 cut(s) 195, 255
CviAII CATG 2 cut(s) 353, 1156
CviQI GTAC 2 cut(s) 195, 255
DdeI CTNAG 7 cut(s) 215, 258, 525, 618, 828, 1146, 1278
DpnI GATC 8 cut(s) 213, 263, 389, 408, 823, 996, 1241, 1440
DpnII GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
DrdI GACNNNNNNGTC 1 cut(s) 1177
DseDI GACNNNNNNGTC 1 cut(s) 1177
Eam1104I CTCTTC 4 cut(s) 368, 693, 885, 1254
EarI CTCTTC 4 cut(s) 368, 693, 885, 1254
EciI GGCGGA 1 cut(s) 85
Eco130I CCWWGG 2 cut(s) 250, 977
Eco31I GGTCTC 1 cut(s) 1051
Eco57I CTGAAG 1 cut(s) 689
EcoNI CCTNNNNNAGG 1 cut(s) 1065
EcoRII CCWGG 1 cut(s) 1188
EcoT14I CCWWGG 2 cut(s) 250, 977
ErhI CCWWGG 2 cut(s) 250, 977
Esp3I CGTCTC 1 cut(s) 168
FaeI CATG 2 cut(s) 356, 1159
FaiI YATR 9 cut(s) 354, 423, 465, 488, 759, 1132, 1157, 1208, 1254
FatI CATG 2 cut(s) 352, 1155
FokI GGATG 4 cut(s) 79, 371, 965, 1113
FspBI CTAG 2 cut(s) 309, 1448
GlaI GCGC 1 cut(s) 1102
HapII CCGG 1 cut(s) 120
HgaI GACGC 1 cut(s) 896
HhaI GCGC 1 cut(s) 1103
Hin1II CATG 2 cut(s) 356, 1159
Hin6I GCGC 1 cut(s) 1101
HinP1I GCGC 1 cut(s) 1101
HindIII AAGCTT 3 cut(s) 81, 217, 722
HinfI GANTC 8 cut(s) 316, 656, 858, 944, 1142, 1274, 1331, 1578
HpaII CCGG 1 cut(s) 120
HphI GGTGA 5 cut(s) 103, 109, 336, 653, 1280
Hpy166II GTNNAC 1 cut(s) 306
Hpy188III TCNNGA 5 cut(s) 224, 477, 556, 884, 1076
Hpy8I GTNNAC 1 cut(s) 306
Hpy99I CGWCG 1 cut(s) 890
HpyAV CCTTC 4 cut(s) 330, 420, 623, 1133
HpyCH4III ACNGT 9 cut(s) 115, 133, 194, 199, 240, 348, 611, 1002, 1544
HpyCH4IV ACGT 3 cut(s) 177, 341, 694
HpyCH4V TGCA 3 cut(s) 1024, 1163, 1397
HpyF10VI GCNNNNNNNGC 6 cut(s) 216, 1030, 1165, 1348, 1351, 1354
HpyF3I CTNAG 7 cut(s) 215, 258, 525, 618, 828, 1146, 1278
HpySE526I ACGT 3 cut(s) 177, 341, 694
Hsp92II CATG 2 cut(s) 356, 1159
HspAI GCGC 1 cut(s) 1101
KpnI GGTACC 1 cut(s) 198
Kzo9I GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
LguI GCTCTTC 3 cut(s) 368, 693, 885
LmnI GCTCC 1 cut(s) 277
Lsp1109I GCAGC 7 cut(s) 219, 504, 1354, 1357, 1360, 1363, 1366
LweI GCATC 1 cut(s) 1033
MabI ACCWGGT 1 cut(s) 1188
MaeI CTAG 2 cut(s) 309, 1448
MaeII ACGT 3 cut(s) 177, 341, 694
MaeIII GTNAC 6 cut(s) 32, 115, 181, 342, 1281, 1544
MalI GATC 8 cut(s) 213, 263, 389, 408, 823, 996, 1241, 1440
MbiI CCGCTC 1 cut(s) 1488
MboI GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
MfeI CAATTG 2 cut(s) 296, 687
MflI RGATCY 1 cut(s) 261
MhlI GDGCHC 1 cut(s) 880
MluCI AATT 8 cut(s) 296, 324, 454, 529, 687, 903, 1198, 1585
MlyI GAGTC 2 cut(s) 953, 1325
MmeI TCCRAC 1 cut(s) 930
MroXI GAANNNNTTC 3 cut(s) 443, 702, 903
MseI TTAA 4 cut(s) 516, 597, 606, 728
MslI CAYNNNNRTG 3 cut(s) 357, 873, 1508
MspI CCGG 1 cut(s) 120
MspR9I CCNGG 1 cut(s) 1190
MunI CAATTG 2 cut(s) 296, 687
MvaI CCWGG 1 cut(s) 1190
MvnI CGCG 3 cut(s) 885, 1101, 1214
MwoI GCNNNNNNNGC 6 cut(s) 216, 1030, 1165, 1348, 1351, 1354
NdeII GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
NlaIII CATG 2 cut(s) 356, 1159
NlaIV GGNNCC 1 cut(s) 196
NmuCI GTSAC 2 cut(s) 115, 342
NruI TCGCGA 1 cut(s) 885
NspV TTCGAA 2 cut(s) 136, 659
PciSI GCTCTTC 3 cut(s) 368, 693, 885
PcsI WCGNNNNNNNCGW 2 cut(s) 656, 871
PdmI GAANNNNTTC 3 cut(s) 443, 702, 903
PfeI GAWTC 6 cut(s) 316, 656, 858, 1142, 1274, 1578
PflMI CCANNNNNTGG 1 cut(s) 778
PleI GAGTC 2 cut(s) 952, 1325
PpsI GAGTC 2 cut(s) 952, 1325
Psp6I CCWGG 1 cut(s) 1188
PspGI CCWGG 1 cut(s) 1188
PspN4I GGNNCC 1 cut(s) 196
PstI CTGCAG 1 cut(s) 1399
PsuI RGATCY 1 cut(s) 261
RruI TCGCGA 1 cut(s) 885
RsaI GTAC 2 cut(s) 196, 256
RsaNI GTAC 2 cut(s) 195, 255
RseI CAYNNNNRTG 3 cut(s) 357, 873, 1508
SapI GCTCTTC 3 cut(s) 368, 693, 885
SaqAI TTAA 4 cut(s) 516, 597, 606, 728
Sau3AI GATC 8 cut(s) 211, 261, 387, 406, 821, 994, 1239, 1438
SchI GAGTC 2 cut(s) 953, 1325
ScrFI CCNGG 1 cut(s) 1190
SduI GDGCHC 1 cut(s) 880
SexAI ACCWGGT 1 cut(s) 1188
SfaNI GCATC 1 cut(s) 1033
SfcI CTRYAG 1 cut(s) 1395
SfuI TTCGAA 2 cut(s) 136, 659
SgrAI CRCCGGYG 1 cut(s) 119
SmiMI CAYNNNNRTG 3 cut(s) 357, 873, 1508
SpeI ACTAGT 1 cut(s) 308
Sse9I AATT 8 cut(s) 296, 324, 454, 529, 687, 903, 1198, 1585
SsiI CCGC 6 cut(s) 96, 99, 102, 123, 1486, 1554
SspI AATATT 1 cut(s) 767
SspMI CTAG 2 cut(s) 309, 1448
StyD4I CCNGG 1 cut(s) 1188
StyI CCWWGG 2 cut(s) 250, 977
TaaI ACNGT 9 cut(s) 115, 133, 194, 199, 240, 348, 611, 1002, 1544
TaiI ACGT 3 cut(s) 180, 344, 697
TaqI TCGA 6 cut(s) 136, 650, 659, 671, 1045, 1242
TasI AATT 8 cut(s) 296, 324, 454, 529, 687, 903, 1198, 1585
TauI GCSGC 3 cut(s) 101, 104, 126
TfiI GAWTC 6 cut(s) 316, 656, 858, 1142, 1274, 1578
Tru1I TTAA 4 cut(s) 516, 597, 606, 728
Tru9I TTAA 4 cut(s) 516, 597, 606, 728
TscAI CASTG 1 cut(s) 616
TseFI GTSAC 2 cut(s) 115, 342
TseI GCWGC 7 cut(s) 207, 492, 1342, 1345, 1348, 1351, 1354
Tsp45I GTSAC 2 cut(s) 115, 342
TspGWI ACGGA 1 cut(s) 264
TspRI CASTG 1 cut(s) 616
Van91I CCANNNNNTGG 1 cut(s) 778
XagI CCTNNNNNAGG 1 cut(s) 1065
XapI RAATTY 2 cut(s) 529, 903
XmnI GAANNNNTTC 3 cut(s) 443, 702, 903
XspI CTAG 2 cut(s) 309, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.