Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003733

Physical Location & Seq

Genomic Coordinates Forward (+)

1266564 .. 1270286

Gene Structure 3723 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1021800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGCTACCTATTTCCAGAATTTGGGTAACCAGAACTTACTGAACCCTTATCAAGGGGACCCCGAACCGCCCGGAAACATGATGATGTATCTGAATCAGGCTTCCTATGCCGCCGGATCCTACTCCGAGGTCTTGTCTGGCGGCAATTTGCCCCCTCAGAAGTATGCTGACTCTGAGGGGGTTAGGAATGAAATGATGTTTATTCCGCCAACGAGTGATCAAGTCAGGGATTGTGACATTGGCGGCAATTCCTTGATTGGGAAACATGGTATTCAGGATCATGGATTGTCTCTCAGCCTTTCCACCCAAATTCCGCAAACGGTATCTCTGCCGTCGTTTCAGTACCAGTATCCGAATACAAGTCTCTCTTCGGTTTTGAGCAATGCTCCGGTGCTAGGGAAGGGCGACGAGTATAATCAAAGCGAGGAGTTTAGAAACTTCGAAAGTTTGGCATCGGGGTTATATGGAGGTGGCCATGAGGCTGTCAAGACACAGGCTTTCTACAATCCTTTGTGTTCATCTGAATCCAAAGAAATGCGCTCTGAAGCATACTTGTATGAATCATTAGGTTCAGCAAACACTATGTTAAGCTCCAAGTACCTCAAGGCAGCACAACAGTTGCTTGATGAAGTGGTAAATGTCCGAAAGGCTCTGAAGCAGTCTCGATTGAACAAGAACCAGAGCTTTAAGCGGAGTGGATTAGGCGGTTCCAAAGAGACTGATGGGAGTGATCAACATTTACGGAGATCATCAGATCCTAGCGAATCAAGCGCTGTCTCTTCTATCGAGTTATCACCATCAGAACGGCAGGATATGCAGAACAAGAAGACTAAACTTTTGTCCATGTTGAATGAGGTAGATCAAAGATACAAACAATATTACCATCAAATGCAAGCCGTGGTGTCATATTTTGACAAGGTGGCTGGGAACGGGGCTGCTGGACCATACACTGCCCTTGCTCTCCATGCAATTTCATGTCACTTTCGCAGTTTGCGTGATGCAATCAAGGGCCAAATTCAAGTGACGCGGAAAAGGTTGGGAGAGCAAGATAATTCATCTGATGGTCAAGGATCAGTAATACCCCGCCTCCGCTATGTGGACCAACAGCTCAGACAGCAGAGGGCATTTCAGCAGCTTGGTGGATTGCAGCATGCTTGGAGGCCTCAGAGAGGACTCCCGGAAAGCTCTGTTACAATCCTTCGTGCTTGGCTGTTTGAACATTTCCTTCTTCCTTACCCGAAGGATTCAGAAAAGATTATGCTTGCAAGGCAGACTGGATTAACCAGAAACCAGGTTGCCAACTGGTTTATCAATGCAAGGGTACGCCTTTGGAAACCCATGATTGAGGATATATACAAAGAAGAATTCGGTGATCTGGACATGGATTCGAAATCTTCACCTGAAAATGCACTCAAGGAAGAAGCAAGAGTTGATTTCTCAGCATCTGAGGACAGGAAAGAGGAGTTGCACGAAAGCCTGATATCCGCAACTGCTGATAGTATTGAACCAGGGAAATTGCATGACTCGAAGTCGGGTCACCATTCCACATGTGACATGCCAAGGTTGGATCATTTCACAGTTGGCAGCGATGTGTCACTTGCGTTGGAGTTACGGCATTGCGAAGAACACGATGGATTTCCTCCGTCTACCGGATCCCATGTAAGAGTTAACGATGCGGTAACTTCTTTGGATTGTCACTATGAGGATCCGGAGCAGCAACATTTAATACAGGTTTGGCAATTCCCACCCGTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048506 GO:0048509 GO:0048510 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

586

Amino Acids

65.47

Weight (kDa)

5.78

Isoelectric Point (pI)

50.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	195 - 335	1.1e-47	Associated with HOX
Homeobox_KN	PF05920	403 - 442	6.6e-18	Homeobox KN domain
Homeodomain	PF00046	411 - 442	1.9e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003733)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19700 AT1G19700 AT1G19700 AT1G19700 AT1G19700 AT1G75410 AT1G75410 AT1G75410
fragaria_vesca	FvH4_2g39260 FvH4_2g39260 FvH4_2g39260 FvH4_2g39260 FvH4_2g39260
malus_domestica	MD08G1024200.v1.1 MD15G1021800.v1.1
prunus_persica	Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1
pyrus_communis	pycom08g01900 pycom15g01810
rosa_chinensis	RchiOBHm_Chr6g0301751
rosa_laevigata	RLG00000011225
rosa_multiflora	Rmu_co8056140.1_g000001 Rmu_sc0005454.1_g000024
rosa_roxburghii	Rroxscaffold_7G00166450
rosa_rugosa	Rorug06G0309000.1 Rorug06G0309100.1 Rorug06G0309200
rosa_samantha	Rh6AG421200 Rh6BG427900 Rh6CG434500 Rh6DG421400
rosa_wichuraiana	Rw6G036460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	22
AccI	GTMKAC	1 cut(s)	1646
AccII	CGCG	1 cut(s)	1027
AccIII	TCCGGA	1 cut(s)	1708
AcoI	YGGCCR	1 cut(s)	472
AcsI	RAATTY	4 cut(s)	19, 309, 1014, 1364
AcuI	CTGAAG	2 cut(s)	564, 674
AfaI	GTAC	3 cut(s)	344, 599, 1323
AfeI	AGCGCT	1 cut(s)	772
AfiI	CCNNNNNNNGG	7 cut(s)	22, 53, 258, 395, 1096, 1169, 1649
AflIII	ACRYGT	1 cut(s)	1547
AgsI	TTSAA	5 cut(s)	670, 850, 1019, 1217, 1505
AhdI	GACNNNNNGTC	1 cut(s)	1528
AjnI	CCWGG	2 cut(s)	1290, 1507
AluBI	AGCT	5 cut(s)	591, 684, 1108, 1135, 1185
AluI	AGCT	5 cut(s)	591, 684, 1108, 1135, 1185
Alw26I	GTCTC	5 cut(s)	294, 368, 666, 710, 781
AlwNI	CAGNNNCTG	1 cut(s)	1445
Aor13HI	TCCGGA	1 cut(s)	1708
Aor51HI	AGCGCT	1 cut(s)	772
AoxI	GGCC	3 cut(s)	472, 1009, 1160
ApeKI	GCWGC	6 cut(s)	608, 935, 1132, 1147, 1584, 1714
ApoI	RAATTY	4 cut(s)	19, 309, 1014, 1364
ArsI	GACNNNNNNTTYG	2 cut(s)	820, 852
AspLEI	GCGC	2 cut(s)	540, 773
AspS9I	GGNCC	4 cut(s)	58, 941, 1009, 1099
AsuC2I	CCSGG	2 cut(s)	72, 1178
AsuHPI	GGTGA	4 cut(s)	786, 1382, 1389, 1529
AsuII	TTCGAA	2 cut(s)	441, 1388
AvaII	GGWCC	3 cut(s)	58, 941, 1099
BalI	TGGCCA	1 cut(s)	474
BamHI	GGATCC	3 cut(s)	116, 1652, 1705
BbsI	GAAGAC	1 cut(s)	833
BbvI	GCAGC	6 cut(s)	620, 922, 1144, 1159, 1596, 1726
BccI	CCATC	5 cut(s)	716, 805, 891, 1055, 1625
BceAI	ACGGC	4 cut(s)	316, 821, 881, 1628
BciT130I	CCWGG	2 cut(s)	1292, 1509
BciVI	GTATCC	1 cut(s)	360
BclI	TGATCA	2 cut(s)	217, 730
BcnI	CCSGG	2 cut(s)	72, 1178
BcoDI	GTCTC	5 cut(s)	294, 368, 666, 710, 781
BfaI	CTAG	2 cut(s)	395, 759
BfoI	RGCGCY	1 cut(s)	774
BfuI	GTATCC	1 cut(s)	360
BisI	GCNGC	9 cut(s)	111, 142, 244, 609, 936, 1133, 1148, 1585, 1715
BlsI	GCNGC	9 cut(s)	112, 143, 245, 610, 937, 1134, 1149, 1586, 1716
Bme1390I	CCNGG	4 cut(s)	72, 1178, 1292, 1509
Bme18I	GGWCC	3 cut(s)	58, 941, 1099
BmeRI	GACNNNNNGTC	1 cut(s)	1528
BmgT120I	GGNCC	4 cut(s)	58, 941, 1009, 1099
BmiI	GGNNCC	6 cut(s)	59, 60, 118, 709, 1654, 1707
BmrFI	CCNGG	4 cut(s)	72, 1178, 1292, 1509
BmsI	GCATC	4 cut(s)	461, 988, 1451, 1663
BpiI	GAAGAC	1 cut(s)	833
BplI	GAGNNNNNCTC	2 cut(s)	370, 402
Bpu14I	TTCGAA	2 cut(s)	441, 1388
BpuEI	CTTGAG	2 cut(s)	587, 1397
BpuMI	CCSGG	2 cut(s)	72, 1178
BsaJI	CCNNGG	4 cut(s)	126, 897, 1508, 1559
BsaWI	WCCGGW	3 cut(s)	388, 1649, 1708
BsaXI	ACNNNNNCTCC	2 cut(s)	1071, 1101
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 53, 258, 395, 1096, 1169, 1649
Bse1I	ACTGG	3 cut(s)	346, 1279, 1307
Bse3DI	GCAATG	2 cut(s)	388, 1615
BseAI	TCCGGA	1 cut(s)	1708
BseBI	CCWGG	2 cut(s)	1292, 1509
BseDI	CCNNGG	4 cut(s)	126, 897, 1508, 1559
BseLI	CCNNNNNNNGG	7 cut(s)	22, 53, 258, 395, 1096, 1169, 1649
BseMI	GCAATG	2 cut(s)	388, 1615
BseMII	CTCAG	7 cut(s)	165, 170, 307, 1123, 1178, 1437, 1452
BseNI	ACTGG	3 cut(s)	346, 1279, 1307
BseRI	GAGGAG	2 cut(s)	440, 1475
BseXI	GCAGC	6 cut(s)	620, 922, 1144, 1159, 1596, 1726
BseYI	CCCAGC	1 cut(s)	923
Bsh1236I	CGCG	1 cut(s)	1027
BshFI	GGCC	3 cut(s)	474, 1011, 1162
BsiSI	CCGG	6 cut(s)	72, 114, 389, 1178, 1650, 1709
BslFI	GGGAC	1 cut(s)	71
BslI	CCNNNNNNNGG	7 cut(s)	22, 53, 258, 395, 1096, 1169, 1649
BsmAI	GTCTC	5 cut(s)	294, 368, 666, 710, 781
BsmFI	GGGAC	1 cut(s)	71
BsnI	GGCC	3 cut(s)	474, 1011, 1162
Bsp119I	TTCGAA	2 cut(s)	441, 1388
Bsp13I	TCCGGA	1 cut(s)	1708
BspANI	GGCC	3 cut(s)	474, 1011, 1162
BspCNI	CTCAG	7 cut(s)	166, 169, 306, 1122, 1177, 1438, 1451
BspEI	TCCGGA	1 cut(s)	1708
BspFNI	CGCG	1 cut(s)	1027
BspLI	GGNNCC	6 cut(s)	59, 60, 118, 709, 1654, 1707
BspT104I	TTCGAA	2 cut(s)	441, 1388
BsrDI	GCAATG	2 cut(s)	388, 1615
BsrI	ACTGG	3 cut(s)	346, 1279, 1307
BssECI	CCNNGG	4 cut(s)	126, 897, 1508, 1559
BssT1I	CCWWGG	1 cut(s)	1559
Bst2UI	CCWGG	2 cut(s)	1292, 1509
Bst4CI	ACNGT	3 cut(s)	322, 618, 1579
Bst6I	CTCTTC	2 cut(s)	373, 784
BstAPI	GCANNNNNTGC	1 cut(s)	814
BstBI	TTCGAA	2 cut(s)	441, 1388
BstC8I	GCNNGC	3 cut(s)	894, 1152, 1263
BstDEI	CTNAG	7 cut(s)	156, 174, 293, 1109, 1164, 1438, 1446
BstDSI	CCRYGG	1 cut(s)	897
BstEII	GGTNACC	2 cut(s)	26, 1535
BstENI	CCTNNNNNAGG	2 cut(s)	51, 1167
BstFNI	CGCG	1 cut(s)	1027
BstH2I	RGCGCY	1 cut(s)	774
BstHHI	GCGC	2 cut(s)	540, 773
BstMAI	GTCTC	5 cut(s)	294, 368, 666, 710, 781
BstMWI	GCNNNNNNNGC	6 cut(s)	107, 768, 814, 965, 1114, 1267
BstNI	CCWGG	2 cut(s)	1292, 1509
BstNSI	RCATGY	3 cut(s)	1154, 1551, 1558
BstPI	GGTNACC	2 cut(s)	26, 1535
BstSCI	CCNGG	4 cut(s)	70, 1176, 1290, 1507
BstUI	CGCG	1 cut(s)	1027
BstV1I	GCAGC	6 cut(s)	620, 922, 1144, 1159, 1596, 1726
BstV2I	GAAGAC	1 cut(s)	833
BstX2I	RGATCY	4 cut(s)	116, 754, 1652, 1705
BstYI	RGATCY	4 cut(s)	116, 754, 1652, 1705
BsuI	GTATCC	1 cut(s)	360
BsuRI	GGCC	3 cut(s)	474, 1011, 1162
BtgI	CCRYGG	1 cut(s)	897
BtgZI	GCGATG	1 cut(s)	1602
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	1 cut(s)	948
Cac8I	GCNNGC	3 cut(s)	894, 1152, 1263
CaiI	CAGNNNCTG	1 cut(s)	1445
CfoI	GCGC	2 cut(s)	540, 773
Cfr13I	GGNCC	4 cut(s)	58, 941, 1009, 1099
CseI	GACGC	1 cut(s)	1033
CsiI	ACCWGGT	1 cut(s)	1290
Csp6I	GTAC	3 cut(s)	343, 598, 1322
CviQI	GTAC	3 cut(s)	343, 598, 1322
DdeI	CTNAG	7 cut(s)	156, 174, 293, 1109, 1164, 1438, 1446
DriI	GACNNNNNGTC	1 cut(s)	1528
EaeI	YGGCCR	1 cut(s)	472
Eam1104I	CTCTTC	2 cut(s)	373, 784
Eam1105I	GACNNNNNGTC	1 cut(s)	1528
EarI	CTCTTC	2 cut(s)	373, 784
EciI	GGCGGA	1 cut(s)	195
Eco130I	CCWWGG	1 cut(s)	1559
Eco147I	AGGCCT	1 cut(s)	1162
Eco32I	GATATC	1 cut(s)	1482
Eco47I	GGWCC	3 cut(s)	58, 941, 1099
Eco47III	AGCGCT	1 cut(s)	772
Eco57I	CTGAAG	2 cut(s)	564, 674
Eco91I	GGTNACC	2 cut(s)	26, 1535
EcoNI	CCTNNNNNAGG	2 cut(s)	51, 1167
EcoO109I	RGGNCCY	1 cut(s)	58
EcoO65I	GGTNACC	2 cut(s)	26, 1535
EcoRI	GAATTC	1 cut(s)	1364
EcoRII	CCWGG	2 cut(s)	1290, 1507
EcoRV	GATATC	1 cut(s)	1482
EcoT14I	CCWWGG	1 cut(s)	1559
ErhI	CCWWGG	1 cut(s)	1559
FalI	AAGNNNNNCTT	2 cut(s)	352, 384
FaqI	GGGAC	1 cut(s)	71
FauI	CCCGC	1 cut(s)	1091
FbaI	TGATCA	2 cut(s)	217, 730
FblI	GTMKAC	1 cut(s)	1646
Fnu4HI	GCNGC	9 cut(s)	111, 142, 244, 609, 936, 1133, 1148, 1585, 1715
Fsp4HI	GCNGC	9 cut(s)	111, 142, 244, 609, 936, 1133, 1148, 1585, 1715
FspBI	CTAG	2 cut(s)	395, 759
GlaI	GCGC	2 cut(s)	539, 772
GluI	GCNGC	9 cut(s)	111, 142, 244, 609, 936, 1133, 1148, 1585, 1715
GsaI	CCCAGC	1 cut(s)	927
HaeII	RGCGCY	1 cut(s)	774
HaeIII	GGCC	3 cut(s)	474, 1011, 1162
HapII	CCGG	6 cut(s)	72, 114, 389, 1178, 1650, 1709
HgaI	GACGC	1 cut(s)	1033
HhaI	GCGC	2 cut(s)	540, 773
Hin6I	GCGC	2 cut(s)	538, 771
HinP1I	GCGC	2 cut(s)	538, 771
HincII	GTYRAC	1 cut(s)	1669
HindII	GTYRAC	1 cut(s)	1669
HinfI	GANTC	9 cut(s)	94, 170, 524, 560, 764, 1173, 1244, 1385, 1523
HpaI	GTTAAC	1 cut(s)	1669
HpaII	CCGG	6 cut(s)	72, 114, 389, 1178, 1650, 1709
HphI	GGTGA	4 cut(s)	786, 1382, 1389, 1529
Hpy166II	GTNNAC	3 cut(s)	1099, 1647, 1669
Hpy188III	TCNNGA	6 cut(s)	16, 275, 487, 663, 1376, 1709
Hpy8I	GTNNAC	3 cut(s)	1099, 1647, 1669
Hpy99I	CGWCG	2 cut(s)	337, 410
HpyAV	CCTTC	4 cut(s)	394, 1208, 1234, 1235
HpyCH4III	ACNGT	3 cut(s)	322, 618, 1579
HpyF10VI	GCNNNNNNNGC	6 cut(s)	107, 768, 814, 965, 1114, 1267
HpyF3I	CTNAG	7 cut(s)	156, 174, 293, 1109, 1164, 1438, 1446
HspAI	GCGC	2 cut(s)	538, 771
KflI	GGGWCCC	1 cut(s)	58
Kpn2I	TCCGGA	1 cut(s)	1708
Ksp22I	TGATCA	2 cut(s)	217, 730
KspAI	GTTAAC	1 cut(s)	1669
LmnI	GCTCC	3 cut(s)	391, 596, 1711
Lsp1109I	GCAGC	6 cut(s)	620, 922, 1144, 1159, 1596, 1726
LweI	GCATC	4 cut(s)	461, 988, 1451, 1663
MabI	ACCWGGT	1 cut(s)	1290
MaeI	CTAG	2 cut(s)	395, 759
MboII	GAAGA	8 cut(s)	360, 771, 838, 1220, 1373, 1386, 1430, 1634
MflI	RGATCY	4 cut(s)	116, 754, 1652, 1705
MlsI	TGGCCA	1 cut(s)	474
MluNI	TGGCCA	1 cut(s)	474
MlyI	GAGTC	3 cut(s)	164, 1167, 1517
MmeI	TCCRAC	2 cut(s)	1545, 1584
Mox20I	TGGCCA	1 cut(s)	474
MroI	TCCGGA	1 cut(s)	1708
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	5 cut(s)	587, 687, 1280, 1668, 1724
MslI	CAYNNNNRTG	1 cut(s)	83
Msp20I	TGGCCA	1 cut(s)	474
MspI	CCGG	6 cut(s)	72, 114, 389, 1178, 1650, 1709
MspR9I	CCNGG	4 cut(s)	72, 1178, 1292, 1509
MvaI	CCWGG	2 cut(s)	1292, 1509
MvnI	CGCG	1 cut(s)	1027
MwoI	GCNNNNNNNGC	6 cut(s)	107, 768, 814, 965, 1114, 1267
NciI	CCSGG	2 cut(s)	72, 1178
NlaIV	GGNNCC	6 cut(s)	59, 60, 118, 709, 1654, 1707
NmuCI	GTSAC	7 cut(s)	233, 977, 1021, 1535, 1550, 1593, 1694
NspI	RCATGY	3 cut(s)	1154, 1551, 1558
NspV	TTCGAA	2 cut(s)	441, 1388
PaeI	GCATGC	1 cut(s)	1154
PceI	AGGCCT	1 cut(s)	1162
PciI	ACATGT	1 cut(s)	1547
PcsI	WCGNNNNNNNCGW	1 cut(s)	991
PfeI	GAWTC	6 cut(s)	94, 524, 560, 764, 1244, 1385
PflMI	CCANNNNNTGG	1 cut(s)	22
PfoI	TCCNGGA	1 cut(s)	1176
PkrI	GCNGC	9 cut(s)	112, 143, 245, 610, 937, 1134, 1149, 1586, 1716
PleI	GAGTC	3 cut(s)	164, 1167, 1517
PpsI	GAGTC	3 cut(s)	164, 1167, 1517
PpuMI	RGGWCCY	1 cut(s)	58
PscI	ACATGT	1 cut(s)	1547
Psp5II	RGGWCCY	1 cut(s)	58
Psp6I	CCWGG	2 cut(s)	1290, 1507
PspEI	GGTNACC	2 cut(s)	26, 1535
PspFI	CCCAGC	1 cut(s)	923
PspGI	CCWGG	2 cut(s)	1290, 1507
PspN4I	GGNNCC	6 cut(s)	59, 60, 118, 709, 1654, 1707
PspPI	GGNCC	4 cut(s)	58, 941, 1009, 1099
PspPPI	RGGWCCY	1 cut(s)	58
PstNI	CAGNNNCTG	1 cut(s)	1445
PsuI	RGATCY	4 cut(s)	116, 754, 1652, 1705
RsaI	GTAC	3 cut(s)	344, 599, 1323
RsaNI	GTAC	3 cut(s)	343, 598, 1322
RseI	CAYNNNNRTG	1 cut(s)	83
SaqAI	TTAA	5 cut(s)	587, 687, 1280, 1668, 1724
SatI	GCNGC	9 cut(s)	111, 142, 244, 609, 936, 1133, 1148, 1585, 1715
Sau96I	GGNCC	4 cut(s)	58, 941, 1009, 1099
SchI	GAGTC	3 cut(s)	164, 1167, 1517
ScrFI	CCNGG	4 cut(s)	72, 1178, 1292, 1509
SexAI	ACCWGGT	1 cut(s)	1290
SfaNI	GCATC	4 cut(s)	461, 988, 1451, 1663
SfuI	TTCGAA	2 cut(s)	441, 1388
SinI	GGWCC	3 cut(s)	58, 941, 1099
SmiMI	CAYNNNNRTG	1 cut(s)	83
SmlI	CTYRAG	2 cut(s)	602, 1412
SmoI	CTYRAG	2 cut(s)	602, 1412
SphI	GCATGC	1 cut(s)	1154
SseBI	AGGCCT	1 cut(s)	1162
SspI	AATATT	1 cut(s)	878
SspMI	CTAG	2 cut(s)	395, 759
StuI	AGGCCT	1 cut(s)	1162
StyD4I	CCNGG	4 cut(s)	70, 1176, 1290, 1507
StyI	CCWWGG	1 cut(s)	1559
TaaI	ACNGT	3 cut(s)	322, 618, 1579
TaqI	TCGA	5 cut(s)	441, 664, 786, 1388, 1526
TauI	GCSGC	3 cut(s)	113, 144, 246
TfiI	GAWTC	6 cut(s)	94, 524, 560, 764, 1244, 1385
Tru1I	TTAA	5 cut(s)	587, 687, 1280, 1668, 1724
Tru9I	TTAA	5 cut(s)	587, 687, 1280, 1668, 1724
TscAI	CASTG	1 cut(s)	955
TseFI	GTSAC	7 cut(s)	233, 977, 1021, 1535, 1550, 1593, 1694
TseI	GCWGC	6 cut(s)	608, 935, 1132, 1147, 1584, 1714
Tsp45I	GTSAC	7 cut(s)	233, 977, 1021, 1535, 1550, 1593, 1694
TspDTI	ATGAA	6 cut(s)	204, 507, 573, 642, 963, 1044
TspGWI	ACGGA	2 cut(s)	757, 1632
TspRI	CASTG	1 cut(s)	955
Van91I	CCANNNNNTGG	1 cut(s)	22
VpaK11BI	GGWCC	3 cut(s)	58, 941, 1099
XagI	CCTNNNNNAGG	2 cut(s)	51, 1167
XapI	RAATTY	4 cut(s)	19, 309, 1014, 1364
XceI	RCATGY	3 cut(s)	1154, 1551, 1558
XmiI	GTMKAC	1 cut(s)	1646
XspI	CTAG	2 cut(s)	395, 759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.