Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003733

Physical Location & Seq

Genomic Coordinates Forward (+)

1406101 .. 1408360

Gene Structure 2260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g01900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGCTACGTATTTCCAAAATTTGAGTAATCAAAACTTACTGAACCCTTATCAAGGGGACGAGAAACTTCCCTCGTACCCCGAACCACCCGGAAACATGATGATGTATCTGAATCAGACTTCCTATGCTGCCGGATCCTACTCCGAGGTCTTGTCCGGTGGCAACTTCTCCCCTCAGAAATATGCTGACTCTGATGGGGGCAGGAGTGAAATGATGTTTATTCCGCCAACGAGTGATCCAGTCAGGGACTGTAACGTTGGCGGCGGGTCCTTGATTGGGAAACATAGTATGCAGGATCATGGATTGTCTCTTAGCCTTTCCACCCAAATTCCGCAACCAGTTTCTCTGCCTTCCTTTCAGTACCAATATCCGAATTCAAGTCTCTCTTCGGTTTTGAGCAATGCTCCAATGATAGGGAAGGGTGAGGAGTACAATCAGAGCGAGGAGTTTAGAAACTTCGAAAGCTTGGCATCGGGGTTATATGGAGGCGGCCATGAGGCTGTCAAAACACAGGCTTTCTACAATCCAATGTGTTCATCGGGATCCAAAGAAATGCATTCGGAATATGTGTATGACTCACTAGGTTCCACGAACGCTATGTTAAGCTCTAAGTACCTCAAGGCCGCACAACAGTTGCTTGATGAAGTGGTCAATGTCAAAAAGGCTTTGAAGCAATCTCGATTGGACAAGAACCAAAGCTTTAAGCGGAGTGGATCAGATGGTTCCAAAGAGACCGATGGGAATGATCAACATTTACCGAGGTCATCAGATCCTGGTGAATCGAGCACCATTTCTTCTGTCGAGTTATCAGCAGCAGAACGGCAGGATTTGCAGAACAAGAAGACCAAACTTTTATCCATGTTGGATGAGGTAGATAGAAGATACAAACAATATTACCATCAAATGCAAGCTGTGGTGTCATTTTTTGACAAGGTGGCTGGGAACGGGGCTGCTGGACCGTACACTGCACTTGCTCTCCAAGCAATTTCCCGTCACTTTCGCAGTTTGCGTGATGCAATCAAGGGCCAAATTCAAGTGACGCGGAAAAGACTGGGAGAGCAAGATAATTCATCGGATGGTCAAGGATCAGTAATACCCCGCCTCCGCTACGTGGACCAGCAACTCAGACAGCAGAGGGCATTTCAGCAGCTTGGTGGATTGCAGCATGCTTGGAGGCCTCAAAGAGGACTTCCGGAAAGCTCTGTTTCAATCCTTCGTGCTTGGCTGTTCGAACATTTCCTTCTTCCCTACCCAAAGGATTCAGAAAAGATTATGCTTGCAAGGCAGACAGGATTAACCAGAAACCAGGTTGCCAACTGGTTTATCAATGCAAGGGTACGGCTTTGGAAGCCCATGATTGAGGAAATGTACAAAGAAGAATTCGGTGATTTGGACACGGATGCGAAATCTTCACCAGAAAATGCACTCAAAGAAGCAGCAAGAGTTGATCTCTCAGCATCTGAGGACAGGAAAGAGGAGTTGCACGAAAGCCTGATATCCACAACTGCTGACAGCATCGAACCAGGGCAAATGCATGACTCGAAGTCGGGTCACAGTTCCACATATGACATGCCAGGGTTGGATCATTTCGCAGTTGGCAACGACGTGTCACTTGCATTGGAGTTGCGGCATTGCGAAGAGCACGATGGATTTCCTCCATCAACCGGATCCCATGTAACAGTTAGCGATGCGGCAGCTTCTTTGGATTGTCACTATGAGGATCCGGAGCAGCAACATTTGATTCAGGTTTGGCAATACCCACGCGTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048506 GO:0048509 GO:0048510 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

591

Amino Acids

65.73

Weight (kDa)

5.61

Isoelectric Point (pI)

49.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	200 - 340	3.6e-50	Associated with HOX
Homeobox_KN	PF05920	408 - 447	6.7e-18	Homeobox KN domain
Homeodomain	PF00046	416 - 447	2e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003733)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19700 AT1G19700 AT1G19700 AT1G19700 AT1G19700 AT1G75410 AT1G75410 AT1G75410
fragaria_vesca	FvH4_2g39260 FvH4_2g39260 FvH4_2g39260 FvH4_2g39260 FvH4_2g39260
malus_domestica	MD08G1024200.v1.1 MD15G1021800.v1.1
prunus_persica	Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1
pyrus_communis	pycom08g01900 pycom15g01810
rosa_chinensis	RchiOBHm_Chr6g0301751
rosa_laevigata	RLG00000011225
rosa_multiflora	Rmu_co8056140.1_g000001 Rmu_sc0005454.1_g000024
rosa_roxburghii	Rroxscaffold_7G00166450
rosa_rugosa	Rorug06G0309000.1 Rorug06G0309100.1 Rorug06G0309200
rosa_samantha	Rh6AG421200 Rh6BG427900 Rh6CG434500 Rh6DG421400
rosa_wichuraiana	Rw6G036460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	1042, 1764
AccIII	TCCGGA	2 cut(s)	1192, 1723
AclI	AACGTT	1 cut(s)	255
AcoI	YGGCCR	1 cut(s)	490
AcsI	RAATTY	5 cut(s)	19, 327, 373, 1029, 1379
AfaI	GTAC	7 cut(s)	77, 362, 431, 614, 962, 1338, 1370
AfiI	CCNNNNNNNGG	6 cut(s)	53, 276, 413, 1111, 1184, 1664
AflIII	ACRYGT	2 cut(s)	1605, 1762
AgsI	TTSAA	4 cut(s)	378, 670, 1034, 1209
AhdI	GACNNNNNGTC	1 cut(s)	1543
AjiI	CACGTC	1 cut(s)	1606
AjnI	CCWGG	4 cut(s)	772, 1305, 1522, 1573
AluBI	AGCT	7 cut(s)	465, 606, 699, 911, 1150, 1200, 1697
AluI	AGCT	7 cut(s)	465, 606, 699, 911, 1150, 1200, 1697
Alw21I	GWGCWC	2 cut(s)	788, 1644
Alw26I	GTCTC	3 cut(s)	312, 386, 725
AlwNI	CAGNNNCTG	3 cut(s)	249, 773, 1460
Aor13HI	TCCGGA	2 cut(s)	1192, 1723
AoxI	GGCC	4 cut(s)	490, 621, 1024, 1175
ApeKI	GCWGC	8 cut(s)	128, 812, 950, 1147, 1162, 1436, 1694, 1729
ApoI	RAATTY	5 cut(s)	19, 327, 373, 1029, 1379
AspS9I	GGNCC	4 cut(s)	267, 956, 1024, 1114
AsuC2I	CCSGG	1 cut(s)	90
AsuHPI	GGTGA	4 cut(s)	434, 788, 1397, 1404
AsuII	TTCGAA	2 cut(s)	459, 1230
AvaII	GGWCC	3 cut(s)	267, 956, 1114
BamHI	GGATCC	4 cut(s)	134, 542, 1667, 1720
BbsI	GAAGAC	1 cut(s)	848
Bbv12I	GWGCWC	2 cut(s)	788, 1644
BbvI	GCAGC	8 cut(s)	115, 824, 937, 1159, 1174, 1448, 1706, 1741
BccI	CCATC	7 cut(s)	188, 713, 731, 906, 1070, 1640, 1666
BceAI	ACGGC	2 cut(s)	836, 1355
BciT130I	CCWGG	4 cut(s)	774, 1307, 1524, 1575
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	1 cut(s)	90
BcoDI	GTCTC	3 cut(s)	312, 386, 725
BfaI	CTAG	1 cut(s)	581
Bme1390I	CCNGG	5 cut(s)	90, 774, 1307, 1524, 1575
Bme18I	GGWCC	3 cut(s)	267, 956, 1114
BmeRI	GACNNNNNGTC	1 cut(s)	1543
BmgBI	CACGTC	1 cut(s)	1606
BmgT120I	GGNCC	4 cut(s)	267, 956, 1024, 1114
BmiI	GGNNCC	7 cut(s)	136, 268, 544, 586, 724, 1669, 1722
BmrFI	CCNGG	5 cut(s)	90, 774, 1307, 1524, 1575
BmrI	ACTGGG	1 cut(s)	1061
BmsI	GCATC	6 cut(s)	479, 1003, 1390, 1466, 1524, 1678
BmuI	ACTGGG	1 cut(s)	1061
BpiI	GAAGAC	1 cut(s)	848
BplI	GAGNNNNNCTC	4 cut(s)	388, 420, 1434, 1466
Bpu14I	TTCGAA	2 cut(s)	459, 1230
BpuEI	CTTGAG	1 cut(s)	602
BpuMI	CCSGG	1 cut(s)	90
BsaAI	YACGTR	2 cut(s)	9, 1111
BsaI	GGTCTC	1 cut(s)	725
BsaJI	CCNNGG	4 cut(s)	144, 758, 1523, 1574
BsaWI	WCCGGW	4 cut(s)	155, 1192, 1664, 1723
BsaXI	ACNNNNNCTCC	4 cut(s)	960, 990, 1086, 1116
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 276, 413, 1111, 1184, 1664
Bse1I	ACTGG	4 cut(s)	239, 338, 1056, 1322
Bse3DI	GCAATG	2 cut(s)	406, 1630
BseAI	TCCGGA	2 cut(s)	1192, 1723
BseBI	CCWGG	4 cut(s)	774, 1307, 1524, 1575
BseDI	CCNNGG	4 cut(s)	144, 758, 1523, 1574
BseGI	GGATG	3 cut(s)	871, 1081, 1405
BseLI	CCNNNNNNNGG	6 cut(s)	53, 276, 413, 1111, 1184, 1664
BseMI	GCAATG	2 cut(s)	406, 1630
BseMII	CTCAG	4 cut(s)	188, 1138, 1452, 1467
BseNI	ACTGG	4 cut(s)	239, 338, 1056, 1322
BseRI	GAGGAG	3 cut(s)	440, 458, 1490
BseXI	GCAGC	8 cut(s)	115, 824, 937, 1159, 1174, 1448, 1706, 1741
BseYI	CCCAGC	1 cut(s)	938
BsgI	GTGCAG	1 cut(s)	951
Bsh1236I	CGCG	2 cut(s)	1042, 1764
BshFI	GGCC	4 cut(s)	492, 623, 1026, 1177
BsiHKAI	GWGCWC	2 cut(s)	788, 1644
BsiSI	CCGG	6 cut(s)	90, 132, 156, 1193, 1665, 1724
BslFI	GGGAC	2 cut(s)	71, 260
BslI	CCNNNNNNNGG	6 cut(s)	53, 276, 413, 1111, 1184, 1664
BsmAI	GTCTC	3 cut(s)	312, 386, 725
BsmFI	GGGAC	2 cut(s)	71, 260
BsmI	GAATGC	1 cut(s)	556
BsnI	GGCC	4 cut(s)	492, 623, 1026, 1177
Bso31I	GGTCTC	1 cut(s)	725
Bsp119I	TTCGAA	2 cut(s)	459, 1230
Bsp1286I	GDGCHC	2 cut(s)	788, 1644
Bsp13I	TCCGGA	2 cut(s)	1192, 1723
Bsp1407I	TGTACA	1 cut(s)	1368
BspANI	GGCC	4 cut(s)	492, 623, 1026, 1177
BspCNI	CTCAG	4 cut(s)	187, 1137, 1453, 1466
BspEI	TCCGGA	2 cut(s)	1192, 1723
BspFNI	CGCG	2 cut(s)	1042, 1764
BspLI	GGNNCC	7 cut(s)	136, 268, 544, 586, 724, 1669, 1722
BspQI	GCTCTTC	1 cut(s)	1632
BspT104I	TTCGAA	2 cut(s)	459, 1230
BspTNI	GGTCTC	1 cut(s)	725
BsrDI	GCAATG	2 cut(s)	406, 1630
BsrGI	TGTACA	1 cut(s)	1368
BsrI	ACTGG	4 cut(s)	239, 338, 1056, 1322
BssECI	CCNNGG	4 cut(s)	144, 758, 1523, 1574
Bst2UI	CCWGG	4 cut(s)	774, 1307, 1524, 1575
Bst4CI	ACNGT	5 cut(s)	251, 633, 960, 1556, 1681
Bst6I	CTCTTC	2 cut(s)	391, 1632
BstAPI	GCANNNNNTGC	1 cut(s)	829
BstAUI	TGTACA	1 cut(s)	1368
BstBAI	YACGTR	2 cut(s)	9, 1111
BstBI	TTCGAA	2 cut(s)	459, 1230
BstC8I	GCNNGC	3 cut(s)	909, 1167, 1278
BstDEI	CTNAG	6 cut(s)	174, 311, 609, 1124, 1453, 1461
BstENI	CCTNNNNNAGG	2 cut(s)	51, 1182
BstF5I	GGATG	3 cut(s)	871, 1081, 1405
BstFNI	CGCG	2 cut(s)	1042, 1764
BstMAI	GTCTC	3 cut(s)	312, 386, 725
BstMWI	GCNNNNNNNGC	4 cut(s)	829, 980, 1282, 1348
BstNI	CCWGG	4 cut(s)	774, 1307, 1524, 1575
BstNSI	RCATGY	2 cut(s)	1169, 1573
BstSCI	CCNGG	5 cut(s)	88, 772, 1305, 1522, 1573
BstSNI	TACGTA	1 cut(s)	9
BstUI	CGCG	2 cut(s)	1042, 1764
BstV1I	GCAGC	8 cut(s)	115, 824, 937, 1159, 1174, 1448, 1706, 1741
BstV2I	GAAGAC	1 cut(s)	848
BstX2I	RGATCY	5 cut(s)	134, 542, 769, 1667, 1720
BstYI	RGATCY	5 cut(s)	134, 542, 769, 1667, 1720
BsuRI	GGCC	4 cut(s)	492, 623, 1026, 1177
BtgZI	GCGATG	1 cut(s)	1701
BtrI	CACGTC	1 cut(s)	1606
BtsCI	GGATG	3 cut(s)	871, 1081, 1405
BtsI	GCAGTG	1 cut(s)	963
BtsIMutI	CAGTG	1 cut(s)	963
Cac8I	GCNNGC	3 cut(s)	909, 1167, 1278
CaiI	CAGNNNCTG	3 cut(s)	249, 773, 1460
Cfr13I	GGNCC	4 cut(s)	267, 956, 1024, 1114
CseI	GACGC	1 cut(s)	1048
CsiI	ACCWGGT	1 cut(s)	1305
Csp6I	GTAC	7 cut(s)	76, 361, 430, 613, 961, 1337, 1369
CviAII	CATG	9 cut(s)	97, 299, 494, 859, 1166, 1354, 1535, 1570, 1673
CviQI	GTAC	7 cut(s)	76, 361, 430, 613, 961, 1337, 1369
DdeI	CTNAG	6 cut(s)	174, 311, 609, 1124, 1453, 1461
DriI	GACNNNNNGTC	1 cut(s)	1543
EaeI	YGGCCR	1 cut(s)	490
Eam1104I	CTCTTC	2 cut(s)	391, 1632
Eam1105I	GACNNNNNGTC	1 cut(s)	1543
EarI	CTCTTC	2 cut(s)	391, 1632
EciI	GGCGGA	1 cut(s)	213
Eco105I	TACGTA	1 cut(s)	9
Eco147I	AGGCCT	1 cut(s)	1177
Eco31I	GGTCTC	1 cut(s)	725
Eco32I	GATATC	1 cut(s)	1497
Eco47I	GGWCC	3 cut(s)	267, 956, 1114
EcoNI	CCTNNNNNAGG	2 cut(s)	51, 1182
EcoO109I	RGGNCCY	1 cut(s)	267
EcoRI	GAATTC	2 cut(s)	373, 1379
EcoRII	CCWGG	4 cut(s)	772, 1305, 1522, 1573
EcoRV	GATATC	1 cut(s)	1497
EcoT22I	ATGCAT	2 cut(s)	558, 1536
FaeI	CATG	9 cut(s)	100, 302, 497, 862, 1169, 1357, 1538, 1573, 1676
FalI	AAGNNNNNCTT	2 cut(s)	370, 402
FaqI	GGGAC	2 cut(s)	71, 260
FatI	CATG	9 cut(s)	96, 298, 493, 858, 1165, 1353, 1534, 1569, 1672
FauI	CCCGC	2 cut(s)	257, 1106
FauNDI	CATATG	1 cut(s)	1564
FbaI	TGATCA	1 cut(s)	745
FokI	GGATG	3 cut(s)	878, 1088, 1412
FspBI	CTAG	1 cut(s)	581
GsaI	CCCAGC	1 cut(s)	942
HaeIII	GGCC	4 cut(s)	492, 623, 1026, 1177
HapII	CCGG	6 cut(s)	90, 132, 156, 1193, 1665, 1724
HgaI	GACGC	1 cut(s)	1048
Hin1II	CATG	9 cut(s)	100, 302, 497, 862, 1169, 1357, 1538, 1573, 1676
HindIII	AAGCTT	2 cut(s)	463, 697
HinfI	GANTC	7 cut(s)	112, 188, 575, 779, 1259, 1538, 1741
HpaII	CCGG	6 cut(s)	90, 132, 156, 1193, 1665, 1724
HphI	GGTGA	4 cut(s)	434, 788, 1397, 1404
Hpy166II	GTNNAC	2 cut(s)	963, 1114
Hpy188III	TCNNGA	4 cut(s)	540, 678, 1193, 1724
Hpy8I	GTNNAC	2 cut(s)	963, 1114
Hpy99I	CGWCG	1 cut(s)	1607
HpyAV	CCTTC	4 cut(s)	360, 412, 1223, 1250
HpyCH4III	ACNGT	5 cut(s)	251, 633, 960, 1556, 1681
HpyCH4IV	ACGT	4 cut(s)	8, 255, 1110, 1605
HpyF10VI	GCNNNNNNNGC	4 cut(s)	829, 980, 1282, 1348
HpyF3I	CTNAG	6 cut(s)	174, 311, 609, 1124, 1453, 1461
HpySE526I	ACGT	4 cut(s)	8, 255, 1110, 1605
Hsp92II	CATG	9 cut(s)	100, 302, 497, 862, 1169, 1357, 1538, 1573, 1676
Kpn2I	TCCGGA	2 cut(s)	1192, 1723
Ksp22I	TGATCA	1 cut(s)	745
LguI	GCTCTTC	1 cut(s)	1632
LmnI	GCTCC	2 cut(s)	409, 1726
Lsp1109I	GCAGC	8 cut(s)	115, 824, 937, 1159, 1174, 1448, 1706, 1741
LweI	GCATC	6 cut(s)	479, 1003, 1390, 1466, 1524, 1678
MabI	ACCWGGT	1 cut(s)	1305
MaeI	CTAG	1 cut(s)	581
MaeII	ACGT	4 cut(s)	8, 255, 1110, 1605
MaeIII	GTNAC	8 cut(s)	251, 992, 1036, 1550, 1608, 1675, 1709, 1765
MboII	GAAGA	8 cut(s)	378, 786, 853, 891, 1235, 1388, 1401, 1649
MflI	RGATCY	5 cut(s)	134, 542, 769, 1667, 1720
MhlI	GDGCHC	2 cut(s)	788, 1644
MluCI	AATT	7 cut(s)	19, 327, 373, 984, 1029, 1066, 1379
MluI	ACGCGT	1 cut(s)	1762
MlyI	GAGTC	3 cut(s)	182, 569, 1532
MmeI	TCCRAC	2 cut(s)	843, 1560
Mph1103I	ATGCAT	2 cut(s)	558, 1536
MroI	TCCGGA	2 cut(s)	1192, 1723
MseI	TTAA	3 cut(s)	602, 702, 1295
MslI	CAYNNNNRTG	1 cut(s)	101
MspI	CCGG	6 cut(s)	90, 132, 156, 1193, 1665, 1724
MspR9I	CCNGG	5 cut(s)	90, 774, 1307, 1524, 1575
Mva1269I	GAATGC	1 cut(s)	556
MvaI	CCWGG	4 cut(s)	774, 1307, 1524, 1575
MvnI	CGCG	2 cut(s)	1042, 1764
MwoI	GCNNNNNNNGC	4 cut(s)	829, 980, 1282, 1348
NciI	CCSGG	1 cut(s)	90
NdeI	CATATG	1 cut(s)	1564
NlaIII	CATG	9 cut(s)	100, 302, 497, 862, 1169, 1357, 1538, 1573, 1676
NlaIV	GGNNCC	7 cut(s)	136, 268, 544, 586, 724, 1669, 1722
NmuCI	GTSAC	5 cut(s)	992, 1036, 1550, 1608, 1709
NsiI	ATGCAT	2 cut(s)	558, 1536
NspI	RCATGY	2 cut(s)	1169, 1573
NspV	TTCGAA	2 cut(s)	459, 1230
PaeI	GCATGC	1 cut(s)	1169
PceI	AGGCCT	1 cut(s)	1177
PciSI	GCTCTTC	1 cut(s)	1632
PcsI	WCGNNNNNNNCGW	1 cut(s)	1006
PctI	GAATGC	1 cut(s)	556
PfeI	GAWTC	4 cut(s)	112, 779, 1259, 1741
PleI	GAGTC	3 cut(s)	182, 569, 1532
PpsI	GAGTC	3 cut(s)	182, 569, 1532
Ppu21I	YACGTR	2 cut(s)	9, 1111
PpuMI	RGGWCCY	1 cut(s)	267
Psp1406I	AACGTT	1 cut(s)	255
Psp5II	RGGWCCY	1 cut(s)	267
Psp6I	CCWGG	4 cut(s)	772, 1305, 1522, 1573
PspFI	CCCAGC	1 cut(s)	938
PspGI	CCWGG	4 cut(s)	772, 1305, 1522, 1573
PspN4I	GGNNCC	7 cut(s)	136, 268, 544, 586, 724, 1669, 1722
PspPI	GGNCC	4 cut(s)	267, 956, 1024, 1114
PspPPI	RGGWCCY	1 cut(s)	267
PstNI	CAGNNNCTG	3 cut(s)	249, 773, 1460
PsuI	RGATCY	5 cut(s)	134, 542, 769, 1667, 1720
RsaI	GTAC	7 cut(s)	77, 362, 431, 614, 962, 1338, 1370
RsaNI	GTAC	7 cut(s)	76, 361, 430, 613, 961, 1337, 1369
RseI	CAYNNNNRTG	1 cut(s)	101
SapI	GCTCTTC	1 cut(s)	1632
SaqAI	TTAA	3 cut(s)	602, 702, 1295
Sau96I	GGNCC	4 cut(s)	267, 956, 1024, 1114
SchI	GAGTC	3 cut(s)	182, 569, 1532
ScrFI	CCNGG	5 cut(s)	90, 774, 1307, 1524, 1575
SduI	GDGCHC	2 cut(s)	788, 1644
SexAI	ACCWGGT	1 cut(s)	1305
SfaNI	GCATC	6 cut(s)	479, 1003, 1390, 1466, 1524, 1678
SfuI	TTCGAA	2 cut(s)	459, 1230
SinI	GGWCC	3 cut(s)	267, 956, 1114
SmiMI	CAYNNNNRTG	1 cut(s)	101
SmlI	CTYRAG	1 cut(s)	617
SmoI	CTYRAG	1 cut(s)	617
SnaBI	TACGTA	1 cut(s)	9
SphI	GCATGC	1 cut(s)	1169
Sse9I	AATT	7 cut(s)	19, 327, 373, 984, 1029, 1066, 1379
SseBI	AGGCCT	1 cut(s)	1177
SspI	AATATT	1 cut(s)	893
SspMI	CTAG	1 cut(s)	581
StuI	AGGCCT	1 cut(s)	1177
StyD4I	CCNGG	5 cut(s)	88, 772, 1305, 1522, 1573
TaaI	ACNGT	5 cut(s)	251, 633, 960, 1556, 1681
TaiI	ACGT	4 cut(s)	11, 258, 1113, 1608
TaqI	TCGA	7 cut(s)	459, 679, 782, 801, 1230, 1518, 1541
TaqII	GACCGA	1 cut(s)	749
TasI	AATT	7 cut(s)	19, 327, 373, 984, 1029, 1066, 1379
TatI	WGTACW	2 cut(s)	429, 1368
TauI	GCSGC	5 cut(s)	264, 492, 626, 1630, 1694
TfiI	GAWTC	4 cut(s)	112, 779, 1259, 1741
Tru1I	TTAA	3 cut(s)	602, 702, 1295
Tru9I	TTAA	3 cut(s)	602, 702, 1295
TscAI	CASTG	1 cut(s)	970
TseFI	GTSAC	5 cut(s)	992, 1036, 1550, 1608, 1709
TseI	GCWGC	8 cut(s)	128, 812, 950, 1147, 1162, 1436, 1694, 1729
Tsp45I	GTSAC	5 cut(s)	992, 1036, 1550, 1608, 1709
TspDTI	ATGAA	3 cut(s)	525, 657, 1059
TspGWI	ACGGA	1 cut(s)	1412
TspRI	CASTG	1 cut(s)	970
VpaK11BI	GGWCC	3 cut(s)	267, 956, 1114
XagI	CCTNNNNNAGG	2 cut(s)	51, 1182
XapI	RAATTY	5 cut(s)	19, 327, 373, 1029, 1379
XceI	RCATGY	2 cut(s)	1169, 1573
XspI	CTAG	1 cut(s)	581
Zsp2I	ATGCAT	2 cut(s)	558, 1536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.