Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003733

Physical Location & Seq

Genomic Coordinates Reverse (-)

60914335 .. 60918255

Gene Structure 3921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G036460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCTACATATTTCCAAAATTTAAGTAATCAAAATTTGTTGACCCCCTACCCAGGGGATGAGAAGCTTGCTTCTTATCCTGAACAGCCTAGTAACATGATGATGTATATGAATCAAGCTTCATATCCCGGATCCTACACCGAGGTCTTGTCCGGTGGCTCTTTCTCCCCCAACAAATGTTCTGAGTCTGATGGTGGTAGGAATGAAATGATGTTTATTCCACCTACAAGTGGCCCGGTCAGAGATTGTGTGGGTGGGGATTCATTGATAGGGTCTCCTGATGGCAAACGTGGTATTCAGGATCATGGATTGTCTCTTAGCCTTGCCACACAAATTCCACCTGCAGTTTCTGTTCCTTCGTTTCAGTACCAGTATCTGAATTCAAGTCTCCCTTCGGTTTTGAGCACTTCTCAAATCCTAGGGAAGGGAGAATTTCAATGTAAAGGTGATGATTACAGCCAAAGTGACGAGTTTAGAAACTTTGAAAATTTGACATCTGGCTTATATGACTCTCTCAAAACACAGAATTTCTCCAATCCTATGTGCTCCATGGTCCCCAAAGAAATGCATTCCGAAGCATACTTGTATGACTCATTAGGTTTTTCAAACTCTTTATTAAACACCAAGTACCTCAAGGCAGCTCAGCAATTGCTTGATGAAGTGGTAAATGTACGAAAGGCTTTGAAGCAGTCTAGATCGAACAAACATCAAAGAACAGACGGTTCGAAAGAGACTGACGGGATAAGAATGTCATCCGACCCTAGTGAGCCAAGCGCCGTATCTTCTGTTGAGTTATCACCAGTAGAAAGGCAGGATTTACAGAACAAGAAGACCAAACTTTTGTCCATGTTGGATGAGGTAGATAGAAGATACAAGCAATATTACCATCAAATGCAAAGCGTGGTGGCATTTTTTGACAAGGCAGCTGGGAATGGGGCTGCCGGACCATACACAGCACTAGCTCTACAAGCAATTTCCCGTCATTTTCGCAGTTTGCATGATGCAATCAAGGGCCAGATTCAAGCGGCACAGAGAAGCCTGGGAGAGAAAGATACTCCACCAGATGCTCAAGGAGAAGTAATACCTCGCCTCCGTTACGTGGACCAGCAGCTCAGACAGCAGAGGGCATTTCAGCAGCATGGTGTAATGCAACATTCTTGGAGACCTCAAAGGGGACTTCCTGAAAGCTCTGTTGCAATCCTTCGCGCTTGGCTATTTGAGCACTTCCTTCTCCCTTACCCAAAGGATTCTGAAAAGGTTATGCTAGCAAGGCAGACCGGCTTAACCAGAAATCAGGTTGCCAACTGGTTTATTAATGCAAGGGTACGTCTTTGGAAGCCCATGATTGAGGAAATGTACAAAGAAGAATTTGGTGAAGAGATGGATTCGAAATCTTCACCAGAAAATGTGCTAAAAGAAGCCGAGTTGAATTCTCAGCATCTGAGGATAGGAGAGATGAGTTGCGGGAAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048506 GO:0048509 GO:0048510 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

491

Amino Acids

55.11

Weight (kDa)

6.4

Isoelectric Point (pI)

50.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	205 - 336	5.5e-47	Associated with HOX
Homeobox_KN	PF05920	404 - 443	5.9e-18	Homeobox KN domain
Homeodomain	PF00046	412 - 443	2e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003733)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19700 AT1G19700 AT1G19700 AT1G19700 AT1G19700 AT1G75410 AT1G75410 AT1G75410
fragaria_vesca	FvH4_2g39260 FvH4_2g39260 FvH4_2g39260 FvH4_2g39260 FvH4_2g39260
malus_domestica	MD08G1024200.v1.1 MD15G1021800.v1.1
prunus_persica	Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1 Prupe.1G373600_v2.0.a1
pyrus_communis	pycom08g01900 pycom15g01810
rosa_chinensis	RchiOBHm_Chr6g0301751
rosa_laevigata	RLG00000011225
rosa_multiflora	Rmu_co8056140.1_g000001 Rmu_sc0005454.1_g000024
rosa_roxburghii	Rroxscaffold_7G00166450
rosa_rugosa	Rorug06G0309000.1 Rorug06G0309100.1 Rorug06G0309200
rosa_samantha	Rh6AG421200 Rh6BG427900 Rh6CG434500 Rh6DG421400
rosa_wichuraiana	Rw6G036460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	349
Acc36I	ACCTGC	1 cut(s)	349
AccII	CGCG	1 cut(s)	1206
AciI	CCGC	2 cut(s)	1025, 1464
AclWI	GGATC	3 cut(s)	126, 139, 309
AcsI	RAATTY	9 cut(s)	19, 34, 333, 379, 431, 487, 526, 1367, 1429
AfaI	GTAC	5 cut(s)	368, 629, 672, 1326, 1358
AfiI	CCNNNNNNNGG	6 cut(s)	53, 54, 230, 424, 1099, 1172
AgsI	TTSAA	7 cut(s)	384, 437, 485, 606, 685, 1022, 1429
AjnI	CCWGG	2 cut(s)	52, 1038
AluBI	AGCT	7 cut(s)	67, 119, 641, 926, 962, 1111, 1188
AluI	AGCT	7 cut(s)	67, 119, 641, 926, 962, 1111, 1188
Alw21I	GWGCWC	3 cut(s)	407, 548, 1224
Alw26I	GTCTC	5 cut(s)	279, 318, 392, 725, 1156
AlwI	GGATC	3 cut(s)	126, 139, 309
AlwNI	CAGNNNCTG	3 cut(s)	350, 376, 1441
AoxI	GGCC	2 cut(s)	232, 1012
ApeKI	GCWGC	5 cut(s)	638, 923, 938, 1108, 1135
ApoI	RAATTY	9 cut(s)	19, 34, 333, 379, 431, 487, 526, 1367, 1429
ArsI	GACNNNNNNTTYG	2 cut(s)	823, 855
AseI	ATTAAT	1 cut(s)	1314
AspA2I	CCTAGG	1 cut(s)	418
AspLEI	GCGC	2 cut(s)	776, 1208
AspS9I	GGNCC	5 cut(s)	233, 553, 944, 1012, 1102
AsuC2I	CCSGG	2 cut(s)	129, 236
AsuHPI	GGTGA	4 cut(s)	458, 789, 1385, 1389
AsuII	TTCGAA	2 cut(s)	725, 1388
AsuNHI	GCTAGC	1 cut(s)	1264
AvaII	GGWCC	3 cut(s)	553, 944, 1102
AvrII	CCTAGG	1 cut(s)	418
BamHI	GGATCC	1 cut(s)	131
BbsI	GAAGAC	1 cut(s)	836
Bbv12I	GWGCWC	3 cut(s)	407, 548, 1224
BbvI	GCAGC	5 cut(s)	650, 925, 935, 1120, 1147
BccI	CCATC	4 cut(s)	185, 275, 894, 1375
BceAI	ACGGC	1 cut(s)	761
BciT130I	CCWGG	2 cut(s)	54, 1040
BcnI	CCSGG	2 cut(s)	129, 236
BcoDI	GTCTC	5 cut(s)	279, 318, 392, 725, 1156
BfaI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
BfmI	CTRYAG	1 cut(s)	342
BfoI	RGCGCY	1 cut(s)	777
BfuAI	ACCTGC	1 cut(s)	349
BisI	GCNGC	6 cut(s)	639, 924, 939, 1026, 1109, 1136
BlnI	CCTAGG	1 cut(s)	418
BlpI	GCTNAGC	1 cut(s)	642
BlsI	GCNGC	6 cut(s)	640, 925, 940, 1027, 1110, 1137
Bme1390I	CCNGG	4 cut(s)	54, 129, 236, 1040
Bme18I	GGWCC	3 cut(s)	553, 944, 1102
BmgT120I	GGNCC	5 cut(s)	233, 553, 944, 1012, 1102
BmiI	GGNNCC	2 cut(s)	133, 555
BmrFI	CCNGG	4 cut(s)	54, 129, 236, 1040
BmsI	GCATC	3 cut(s)	991, 1054, 1447
BmtI	GCTAGC	1 cut(s)	1268
BpiI	GAAGAC	1 cut(s)	836
BplI	GAGNNNNNCTC	2 cut(s)	394, 426
Bpu1102I	GCTNAGC	1 cut(s)	642
Bpu14I	TTCGAA	2 cut(s)	725, 1388
BpuEI	CTTGAG	2 cut(s)	617, 1053
BpuMI	CCSGG	2 cut(s)	129, 236
BsaAI	YACGTR	1 cut(s)	1099
BsaI	GGTCTC	2 cut(s)	279, 1156
BsaJI	CCNNGG	6 cut(s)	52, 53, 141, 418, 549, 1039
BsaWI	WCCGGW	1 cut(s)	152
BsaXI	ACNNNNNCTCC	2 cut(s)	1074, 1104
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 54, 230, 424, 1099, 1172
Bse118I	RCCGGY	1 cut(s)	1277
Bse1I	ACTGG	3 cut(s)	370, 800, 1310
BseBI	CCWGG	2 cut(s)	54, 1040
BseDI	CCNNGG	6 cut(s)	52, 53, 141, 418, 549, 1039
BseGI	GGATG	3 cut(s)	64, 752, 859
BseLI	CCNNNNNNNGG	6 cut(s)	53, 54, 230, 424, 1099, 1172
BseMII	CTCAG	5 cut(s)	174, 656, 1126, 1433, 1448
BseNI	ACTGG	3 cut(s)	370, 800, 1310
BseXI	GCAGC	5 cut(s)	650, 925, 935, 1120, 1147
BseYI	CCCAGC	1 cut(s)	926
Bsh1236I	CGCG	1 cut(s)	1206
BshFI	GGCC	2 cut(s)	234, 1014
BsiHKAI	GWGCWC	3 cut(s)	407, 548, 1224
BsiSI	CCGG	5 cut(s)	129, 153, 236, 942, 1278
BslFI	GGGAC	2 cut(s)	539, 1188
BslI	CCNNNNNNNGG	6 cut(s)	53, 54, 230, 424, 1099, 1172
BsmAI	GTCTC	5 cut(s)	279, 318, 392, 725, 1156
BsmFI	GGGAC	2 cut(s)	539, 1188
BsmI	GAATGC	1 cut(s)	568
BsnI	GGCC	2 cut(s)	234, 1014
Bso31I	GGTCTC	2 cut(s)	279, 1156
Bsp119I	TTCGAA	2 cut(s)	725, 1388
Bsp1286I	GDGCHC	3 cut(s)	407, 548, 1224
Bsp1407I	TGTACA	1 cut(s)	1356
Bsp143I	GATC	3 cut(s)	131, 301, 695
Bsp1720I	GCTNAGC	1 cut(s)	642
Bsp19I	CCATGG	1 cut(s)	549
BspACI	CCGC	2 cut(s)	1025, 1464
BspANI	GGCC	2 cut(s)	234, 1014
BspCNI	CTCAG	5 cut(s)	175, 655, 1125, 1434, 1447
BspFNI	CGCG	1 cut(s)	1206
BspLI	GGNNCC	2 cut(s)	133, 555
BspMAI	CTGCAG	1 cut(s)	346
BspMI	ACCTGC	1 cut(s)	349
BspOI	GCTAGC	1 cut(s)	1268
BspPI	GGATC	3 cut(s)	126, 139, 309
BspT104I	TTCGAA	2 cut(s)	725, 1388
BspTNI	GGTCTC	2 cut(s)	279, 1156
BsrFI	RCCGGY	1 cut(s)	1277
BsrGI	TGTACA	1 cut(s)	1356
BsrI	ACTGG	3 cut(s)	370, 800, 1310
BssAI	RCCGGY	1 cut(s)	1277
BssECI	CCNNGG	6 cut(s)	52, 53, 141, 418, 549, 1039
BssMI	GATC	3 cut(s)	131, 301, 695
BssT1I	CCWWGG	2 cut(s)	418, 549
Bst2UI	CCWGG	2 cut(s)	54, 1040
Bst4CI	ACNGT	1 cut(s)	722
Bst6I	CTCTTC	1 cut(s)	1371
BstAUI	TGTACA	1 cut(s)	1356
BstBAI	YACGTR	1 cut(s)	1099
BstBI	TTCGAA	2 cut(s)	725, 1388
BstC8I	GCNNGC	2 cut(s)	69, 1266
BstDEI	CTNAG	6 cut(s)	183, 317, 642, 1112, 1434, 1442
BstDSI	CCRYGG	1 cut(s)	549
BstENI	CCTNNNNNAGG	1 cut(s)	422
BstF5I	GGATG	3 cut(s)	64, 752, 859
BstFNI	CGCG	1 cut(s)	1206
BstH2I	RGCGCY	1 cut(s)	777
BstHHI	GCGC	2 cut(s)	776, 1208
BstKTI	GATC	3 cut(s)	134, 304, 698
BstMAI	GTCTC	5 cut(s)	279, 318, 392, 725, 1156
BstMBI	GATC	3 cut(s)	131, 301, 695
BstMWI	GCNNNNNNNGC	4 cut(s)	968, 1117, 1219, 1270
BstNI	CCWGG	2 cut(s)	54, 1040
BstSCI	CCNGG	4 cut(s)	52, 127, 234, 1038
BstSFI	CTRYAG	1 cut(s)	342
BstUI	CGCG	1 cut(s)	1206
BstV1I	GCAGC	5 cut(s)	650, 925, 935, 1120, 1147
BstV2I	GAAGAC	1 cut(s)	836
BstX2I	RGATCY	1 cut(s)	131
BstYI	RGATCY	1 cut(s)	131
BsuRI	GGCC	2 cut(s)	234, 1014
BtgI	CCRYGG	1 cut(s)	549
BtsCI	GGATG	3 cut(s)	64, 752, 859
BveI	ACCTGC	1 cut(s)	349
Cac8I	GCNNGC	2 cut(s)	69, 1266
CaiI	CAGNNNCTG	3 cut(s)	350, 376, 1441
CfoI	GCGC	2 cut(s)	776, 1208
Cfr10I	RCCGGY	1 cut(s)	1277
Cfr13I	GGNCC	5 cut(s)	233, 553, 944, 1012, 1102
Csp6I	GTAC	5 cut(s)	367, 628, 671, 1325, 1357
CviAII	CATG	7 cut(s)	97, 305, 550, 847, 998, 1139, 1342
CviQI	GTAC	5 cut(s)	367, 628, 671, 1325, 1357
DdeI	CTNAG	6 cut(s)	183, 317, 642, 1112, 1434, 1442
DpnI	GATC	3 cut(s)	133, 303, 697
DpnII	GATC	3 cut(s)	131, 301, 695
Eam1104I	CTCTTC	1 cut(s)	1371
EarI	CTCTTC	1 cut(s)	1371
Eco130I	CCWWGG	2 cut(s)	418, 549
Eco31I	GGTCTC	2 cut(s)	279, 1156
Eco47I	GGWCC	3 cut(s)	553, 944, 1102
EcoNI	CCTNNNNNAGG	1 cut(s)	422
EcoRI	GAATTC	2 cut(s)	379, 1429
EcoRII	CCWGG	2 cut(s)	52, 1038
EcoT14I	CCWWGG	2 cut(s)	418, 549
EcoT22I	ATGCAT	1 cut(s)	570
ErhI	CCWWGG	2 cut(s)	418, 549
FaeI	CATG	7 cut(s)	100, 308, 553, 850, 1001, 1142, 1345
FalI	AAGNNNNNCTT	2 cut(s)	376, 408
FaqI	GGGAC	2 cut(s)	539, 1188
FatI	CATG	7 cut(s)	96, 304, 549, 846, 997, 1138, 1341
FauI	CCCGC	1 cut(s)	1457
Fnu4HI	GCNGC	6 cut(s)	639, 924, 939, 1026, 1109, 1136
FokI	GGATG	3 cut(s)	71, 739, 866
Fsp4HI	GCNGC	6 cut(s)	639, 924, 939, 1026, 1109, 1136
FspBI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
GlaI	GCGC	2 cut(s)	775, 1207
GluI	GCNGC	6 cut(s)	639, 924, 939, 1026, 1109, 1136
GsaI	CCCAGC	1 cut(s)	930
HaeII	RGCGCY	1 cut(s)	777
HaeIII	GGCC	2 cut(s)	234, 1014
HapII	CCGG	5 cut(s)	129, 153, 236, 942, 1278
HhaI	GCGC	2 cut(s)	776, 1208
Hin1II	CATG	7 cut(s)	100, 308, 553, 850, 1001, 1142, 1345
Hin6I	GCGC	2 cut(s)	774, 1206
HinP1I	GCGC	2 cut(s)	774, 1206
HincII	GTYRAC	1 cut(s)	42
HindII	GTYRAC	1 cut(s)	42
HindIII	AAGCTT	2 cut(s)	65, 117
HinfI	GANTC	8 cut(s)	112, 185, 260, 509, 590, 1018, 1247, 1385
HpaII	CCGG	5 cut(s)	129, 153, 236, 942, 1278
HphI	GGTGA	4 cut(s)	458, 789, 1385, 1389
Hpy166II	GTNNAC	2 cut(s)	42, 1102
Hpy188I	TCNGA	9 cut(s)	184, 190, 242, 378, 574, 757, 1115, 1252, 1443
Hpy188III	TCNNGA	5 cut(s)	80, 278, 299, 693, 1181
Hpy8I	GTNNAC	2 cut(s)	42, 1102
HpyAV	CCTTC	5 cut(s)	366, 402, 418, 1211, 1238
HpyCH4III	ACNGT	1 cut(s)	722
HpyCH4IV	ACGT	3 cut(s)	289, 1098, 1327
HpyCH4V	TGCA	8 cut(s)	344, 568, 895, 997, 1004, 1150, 1196, 1319
HpyF10VI	GCNNNNNNNGC	4 cut(s)	968, 1117, 1219, 1270
HpyF3I	CTNAG	6 cut(s)	183, 317, 642, 1112, 1434, 1442
HpySE526I	ACGT	3 cut(s)	289, 1098, 1327
Hsp92II	CATG	7 cut(s)	100, 308, 553, 850, 1001, 1142, 1345
HspAI	GCGC	2 cut(s)	774, 1206
Kzo9I	GATC	3 cut(s)	131, 301, 695
LmnI	GCTCC	1 cut(s)	551
Lsp1109I	GCAGC	5 cut(s)	650, 925, 935, 1120, 1147
LweI	GCATC	3 cut(s)	991, 1054, 1447
MaeI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
MaeII	ACGT	3 cut(s)	289, 1098, 1327
MaeIII	GTNAC	3 cut(s)	92, 464, 1094
MalI	GATC	3 cut(s)	133, 303, 697
MboI	GATC	3 cut(s)	131, 301, 695
MboII	GAAGA	6 cut(s)	774, 841, 879, 1376, 1386, 1388
MfeI	CAATTG	1 cut(s)	647
MflI	RGATCY	1 cut(s)	131
MhlI	GDGCHC	3 cut(s)	407, 548, 1224
MlyI	GAGTC	3 cut(s)	194, 503, 584
MmeI	TCCRAC	2 cut(s)	780, 831
MnlI	CCTC	9 cut(s)	136, 641, 850, 1095, 1100, 1116, 1176, 1342, 1437
Mph1103I	ATGCAT	1 cut(s)	570
MseI	TTAA	4 cut(s)	23, 617, 1283, 1314
MslI	CAYNNNNRTG	1 cut(s)	101
MspA1I	CMGCKG	1 cut(s)	926
MspI	CCGG	5 cut(s)	129, 153, 236, 942, 1278
MspR9I	CCNGG	4 cut(s)	54, 129, 236, 1040
MunI	CAATTG	1 cut(s)	647
Mva1269I	GAATGC	1 cut(s)	568
MvaI	CCWGG	2 cut(s)	54, 1040
MvnI	CGCG	1 cut(s)	1206
MwoI	GCNNNNNNNGC	4 cut(s)	968, 1117, 1219, 1270
NciI	CCSGG	2 cut(s)	129, 236
NcoI	CCATGG	1 cut(s)	549
NdeII	GATC	3 cut(s)	131, 301, 695
NheI	GCTAGC	1 cut(s)	1264
NlaIII	CATG	7 cut(s)	100, 308, 553, 850, 1001, 1142, 1345
NlaIV	GGNNCC	2 cut(s)	133, 555
NmeAIII	GCCGAG	1 cut(s)	1447
NmuCI	GTSAC	1 cut(s)	464
NsiI	ATGCAT	1 cut(s)	570
NspV	TTCGAA	2 cut(s)	725, 1388
PaqCI	CACCTGC	1 cut(s)	349
PasI	CCCWGGG	1 cut(s)	53
PctI	GAATGC	1 cut(s)	568
PfeI	GAWTC	5 cut(s)	112, 260, 1018, 1247, 1385
PfoI	TCCNGGA	1 cut(s)	127
PkrI	GCNGC	6 cut(s)	640, 925, 940, 1027, 1110, 1137
PleI	GAGTC	3 cut(s)	193, 503, 584
PpsI	GAGTC	3 cut(s)	193, 503, 584
Ppu21I	YACGTR	1 cut(s)	1099
PshBI	ATTAAT	1 cut(s)	1314
Psp6I	CCWGG	2 cut(s)	52, 1038
PspFI	CCCAGC	1 cut(s)	926
PspGI	CCWGG	2 cut(s)	52, 1038
PspN4I	GGNNCC	2 cut(s)	133, 555
PspPI	GGNCC	5 cut(s)	233, 553, 944, 1012, 1102
PstI	CTGCAG	1 cut(s)	346
PstNI	CAGNNNCTG	3 cut(s)	350, 376, 1441
PsuI	RGATCY	1 cut(s)	131
PvuII	CAGCTG	1 cut(s)	926
RsaI	GTAC	5 cut(s)	368, 629, 672, 1326, 1358
RsaNI	GTAC	5 cut(s)	367, 628, 671, 1325, 1357
RseI	CAYNNNNRTG	1 cut(s)	101
SaqAI	TTAA	4 cut(s)	23, 617, 1283, 1314
SatI	GCNGC	6 cut(s)	639, 924, 939, 1026, 1109, 1136
Sau3AI	GATC	3 cut(s)	131, 301, 695
Sau96I	GGNCC	5 cut(s)	233, 553, 944, 1012, 1102
SchI	GAGTC	3 cut(s)	194, 503, 584
ScrFI	CCNGG	4 cut(s)	54, 129, 236, 1040
SduI	GDGCHC	3 cut(s)	407, 548, 1224
SfaNI	GCATC	3 cut(s)	991, 1054, 1447
SfcI	CTRYAG	1 cut(s)	342
SfuI	TTCGAA	2 cut(s)	725, 1388
SinI	GGWCC	3 cut(s)	553, 944, 1102
SmiMI	CAYNNNNRTG	1 cut(s)	101
SmlI	CTYRAG	2 cut(s)	632, 1068
SmoI	CTYRAG	2 cut(s)	632, 1068
SsiI	CCGC	2 cut(s)	1025, 1464
SspI	AATATT	1 cut(s)	881
SspMI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
StyD4I	CCNGG	4 cut(s)	52, 127, 234, 1038
StyI	CCWWGG	2 cut(s)	418, 549
TaaI	ACNGT	1 cut(s)	722
TaiI	ACGT	3 cut(s)	292, 1101, 1330
TaqI	TCGA	3 cut(s)	698, 725, 1388
TatI	WGTACW	1 cut(s)	1356
TauI	GCSGC	1 cut(s)	1028
TfiI	GAWTC	5 cut(s)	112, 260, 1018, 1247, 1385
Tru1I	TTAA	4 cut(s)	23, 617, 1283, 1314
Tru9I	TTAA	4 cut(s)	23, 617, 1283, 1314
TseFI	GTSAC	1 cut(s)	464
TseI	GCWGC	5 cut(s)	638, 923, 938, 1108, 1135
Tsp45I	GTSAC	1 cut(s)	464
TspDTI	ATGAA	5 cut(s)	111, 125, 219, 252, 672
TspGWI	ACGGA	1 cut(s)	1082
VpaK11BI	GGWCC	3 cut(s)	553, 944, 1102
VspI	ATTAAT	1 cut(s)	1314
XagI	CCTNNNNNAGG	1 cut(s)	422
XapI	RAATTY	9 cut(s)	19, 34, 333, 379, 431, 487, 526, 1367, 1429
XbaI	TCTAGA	1 cut(s)	692
XmaJI	CCTAGG	1 cut(s)	418
XspI	CTAG	6 cut(s)	90, 419, 693, 762, 959, 1265
Zsp2I	ATGCAT	1 cut(s)	570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.