AT1G24100

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003868
Physical Location & Seq
Reverse (-)
8525334 .. 8527087
1754 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G24100.1

Sequence Viewer

Length: 1383 bp
ATGGCGGAAACAACTCCCAAAGTGAAAGGCCACGTCGTAATCTTACCATACCCAGTTCAAGGCCACCTAAACCCAATGGTTCAATTCGCTAAACGTCTAGTCTCCAAAAACGTCAAAGTCACAATCGCCACCACTACCTACACCGCCTCCTCAATCACAACACCATCACTCTCCGTCGAACCAATCTCCGATGGATTCGATTTCATCCCCATAGGTATCCCCGGTTTCAGCGTCGATACTTACTCAGAATCCTTCAAGCTCAACGGATCCGAAACCCTAACTCTCCTAATCGAGAAATTCAAATCCACAGATTCACCAATCGATTGCTTAATCTACGATTCGTTTCTTCCTTGGGGACTTGAAGTTGCTAGATCTATGGAACTTTCAGCTGCTTCTTTCTTCACTAATAATCTCACTGTTTGTTCTGTGTTGCGTAAATTCTCTAACGGTGACTTTCCTCTTCCCGCTGATCCTAATTCGGCGCCGTTTCGTATCCGTGGCTTACCGTCTTTGAGCTACGATGAGTTACCTTCGTTTGTGGGACGTCATTGGTTGACTCATCCTGAGCATGGCAGAGTTCTTCTGAATCAGTTTCCTAACCATGAAAATGCTGATTGGTTATTCGTTAATGGCTTTGAAGGGTTAGAAGAAACACAAGATTGTGAAAATGGTGAGTCTGATGCAATGAAGGCGACGTTGATCGGACCGATGATTCCATCGGCTTATCTTGATGATCGGATGGAAGATGATAAAGACTATGGTGCGAGTCTGTTGAAACCGATATCGAAGGAGTGTATGGAGTGGCTTGAGACTAAGCAGGCTCAGTCAGTAGCATTTGTTTCGTTTGGTTCGTTTGGGATTCTCTTTGAGAAGCAACTTGCAGAGGTAGCTATTGCGCTACAAGAATCGGATTTGAACTTCTTGTGGGTGATTAAAGAAGCTCATATAGCGAAATTGCCTGAAGGGTTTGTGGAATCGACTAAAGATAGAGCCTTGTTGGTTTCTTGGTGTAACCAGCTTGAGGTTTTAGCTCATGAATCGATAGGTTGCTTTTTGACTCATTGTGGTTGGAACTCTACGTTGGAAGGGTTGAGTTTGGGAGTTCCGATGGTTGGTGTGCCTCAGTGGAGTGATCAGATGAATGATGCTAAGTTTGTGGAGGAAGTTTGGAAAGTTGGGTATAGAGCGAAAGAGGAAGCTGGGGAAGTAATCGTGAAGAGTGAAGAATTGGTGAGGTGTTTGAAAGGAGTGATGGAAGGAGAGAGTAGTGTGAAGATTAGAGAGAGTTCGAAGAAGTGGAAAGATTTGGCTGTGAAGGCAATGAGTGAAGGAGGAAGCTCTGATCGAAGCATTAACGAGTTTATAGAGAGTTTAGGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016043 GO:0016143 GO:0016144 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042545 GO:0042631 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045229 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0047251 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051179 GO:0051239 GO:0051240 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070727 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0098542 GO:0104004 GO:1900140 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901657 GO:1901659 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

460

Amino Acids

51.0

Weight (kDa)

4.9

Isoelectric Point (pI)

35.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 12 - 47 6.7e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 247 - 422 5.3e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 547
AccB1I GGYRCC 1 cut(s) 481
AciI CCGC 3 cut(s) 5, 144, 465
AclWI GGATC 3 cut(s) 261, 274, 464
AcsI RAATTY 2 cut(s) 296, 437
AcuI CTGAAG 1 cut(s) 981
AcyI GRCGYC 2 cut(s) 482, 544
AfiI CCNNNNNNNGG 4 cut(s) 59, 569, 1021, 1112
AgsI TTSAA 9 cut(s) 59, 83, 256, 301, 362, 638, 775, 916, 1243
AjiI CACGTC 1 cut(s) 34
AjuI GAANNNNNNNTTGG 2 cut(s) 1064, 1096
AluBI AGCT 9 cut(s) 259, 389, 516, 890, 941, 1018, 1031, 1199, 1338
AluI AGCT 9 cut(s) 259, 389, 516, 890, 941, 1018, 1031, 1199, 1338
Alw26I GTCTC 2 cut(s) 106, 803
AlwI GGATC 3 cut(s) 261, 274, 464
AoxI GGCC 2 cut(s) 28, 61
ApeKI GCWGC 1 cut(s) 389
ApoI RAATTY 2 cut(s) 296, 437
AspLEI GCGC 2 cut(s) 484, 898
AspS9I GGNCC 1 cut(s) 704
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 5 cut(s) 306, 461, 683, 940, 1243
AsuII TTCGAA 1 cut(s) 1289
AvaII GGWCC 1 cut(s) 704
BamHI GGATCC 1 cut(s) 266
BanI GGYRCC 1 cut(s) 481
BbvI GCAGC 1 cut(s) 376
BccI CCATC 6 cut(s) 172, 185, 724, 733, 1102, 1246
BceAI ACGGC 1 cut(s) 469
BcgI CGANNNNNNTGC 2 cut(s) 822, 856
BciVI GTATCC 2 cut(s) 227, 503
BclI TGATCA 1 cut(s) 1132
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 2 cut(s) 106, 803
BfaI CTAG 2 cut(s) 98, 369
BfoI RGCGCY 1 cut(s) 485
BfuI GTATCC 2 cut(s) 227, 503
BglII AGATCT 1 cut(s) 371
BisI GCNGC 1 cut(s) 390
BlsI GCNGC 1 cut(s) 391
Bme1390I CCNGG 1 cut(s) 222
Bme18I GGWCC 1 cut(s) 704
BmgBI CACGTC 1 cut(s) 34
BmgT120I GGNCC 1 cut(s) 704
BmiI GGNNCC 2 cut(s) 268, 483
BmrFI CCNGG 1 cut(s) 222
BmrI ACTGGG 1 cut(s) 47
BmsI GCATC 2 cut(s) 670, 1135
BmuI ACTGGG 1 cut(s) 47
Bpu10I CCTNAGC 1 cut(s) 564
Bpu14I TTCGAA 1 cut(s) 1289
BpuEI CTTGAG 2 cut(s) 827, 1040
BpuMI CCSGG 1 cut(s) 222
Bsa29I ATCGAT 2 cut(s) 321, 1040
BsaHI GRCGYC 2 cut(s) 482, 544
BsaJI CCNNGG 3 cut(s) 220, 350, 496
BsaXI ACNNNNNCTCC 2 cut(s) 131, 161
Bsc4I CCNNNNNNNGG 4 cut(s) 59, 569, 1021, 1112
Bse1I ACTGG 1 cut(s) 53
Bse3DI GCAATG 2 cut(s) 690, 1326
BseCI ATCGAT 2 cut(s) 321, 1040
BseDI CCNNGG 3 cut(s) 220, 350, 496
BseGI GGATG 3 cut(s) 204, 559, 744
BseLI CCNNNNNNNGG 4 cut(s) 59, 569, 1021, 1112
BseMI GCAATG 2 cut(s) 690, 1326
BseMII CTCAG 4 cut(s) 258, 555, 836, 1136
BseNI ACTGG 1 cut(s) 53
BseRI GAGGAG 1 cut(s) 139
BseXI GCAGC 1 cut(s) 376
BseYI CCCAGC 1 cut(s) 1199
BshFI GGCC 2 cut(s) 30, 63
BshNI GGYRCC 1 cut(s) 481
BshVI ATCGAT 2 cut(s) 321, 1040
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 2 cut(s) 369, 555
BslI CCNNNNNNNGG 4 cut(s) 59, 569, 1021, 1112
BsmAI GTCTC 2 cut(s) 106, 803
BsmFI GGGAC 2 cut(s) 369, 555
BsnI GGCC 2 cut(s) 30, 63
Bsp119I TTCGAA 1 cut(s) 1289
Bsp143I GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
BspACI CCGC 3 cut(s) 5, 144, 465
BspANI GGCC 2 cut(s) 30, 63
BspCNI CTCAG 4 cut(s) 257, 556, 835, 1135
BspDI ATCGAT 2 cut(s) 321, 1040
BspHI TCATGA 1 cut(s) 1033
BspLI GGNNCC 2 cut(s) 268, 483
BspPI GGATC 3 cut(s) 261, 274, 464
BspT104I TTCGAA 1 cut(s) 1289
BspT107I GGYRCC 1 cut(s) 481
BsrDI GCAATG 2 cut(s) 690, 1326
BsrI ACTGG 1 cut(s) 53
BssECI CCNNGG 3 cut(s) 220, 350, 496
BssMI GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
BssNI GRCGYC 2 cut(s) 482, 544
BssT1I CCWWGG 1 cut(s) 350
Bst4CI ACNGT 3 cut(s) 418, 449, 507
Bst6I CTCTTC 2 cut(s) 465, 1211
BstACI GRCGYC 2 cut(s) 482, 544
BstBI TTCGAA 1 cut(s) 1289
BstC8I GCNNGC 1 cut(s) 819
BstDEI CTNAG 6 cut(s) 244, 564, 813, 822, 1122, 1149
BstDSI CCRYGG 1 cut(s) 496
BstF5I GGATG 3 cut(s) 204, 559, 744
BstH2I RGCGCY 1 cut(s) 485
BstHHI GCGC 2 cut(s) 484, 898
BstKTI GATC 7 cut(s) 269, 374, 472, 702, 736, 1135, 1345
BstMAI GTCTC 2 cut(s) 106, 803
BstMBI GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
BstMWI GCNNNNNNNGC 4 cut(s) 689, 887, 947, 1316
BstSCI CCNGG 1 cut(s) 220
BstV1I GCAGC 1 cut(s) 376
BstX2I RGATCY 2 cut(s) 266, 371
BstYI RGATCY 2 cut(s) 266, 371
Bsu15I ATCGAT 2 cut(s) 321, 1040
BsuI GTATCC 2 cut(s) 227, 503
BsuRI GGCC 2 cut(s) 30, 63
BsuTUI ATCGAT 2 cut(s) 321, 1040
BtgI CCRYGG 1 cut(s) 496
BtrI CACGTC 1 cut(s) 34
BtsCI GGATG 3 cut(s) 204, 559, 744
BtsIMutI CAGTG 2 cut(s) 414, 1130
Cac8I GCNNGC 1 cut(s) 819
CciI TCATGA 1 cut(s) 1033
CfoI GCGC 2 cut(s) 484, 898
Cfr13I GGNCC 1 cut(s) 704
ClaI ATCGAT 2 cut(s) 321, 1040
CpoI CGGWCCG 1 cut(s) 704
CseI GACGC 1 cut(s) 220
CspI CGGWCCG 1 cut(s) 704
CviAII CATG 3 cut(s) 569, 602, 1034
DdeI CTNAG 6 cut(s) 244, 564, 813, 822, 1122, 1149
DinI GGCGCC 1 cut(s) 483
DpnI GATC 7 cut(s) 268, 373, 471, 701, 735, 1134, 1344
DpnII GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
Eam1104I CTCTTC 2 cut(s) 465, 1211
EarI CTCTTC 2 cut(s) 465, 1211
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 350
Eco32I GATATC 1 cut(s) 783
Eco47I GGWCC 1 cut(s) 704
Eco57I CTGAAG 1 cut(s) 981
EcoRV GATATC 1 cut(s) 783
EcoT14I CCWWGG 1 cut(s) 350
EgeI GGCGCC 1 cut(s) 483
EheI GGCGCC 1 cut(s) 483
ErhI CCWWGG 1 cut(s) 350
FaeI CATG 3 cut(s) 572, 605, 1037
FaqI GGGAC 2 cut(s) 369, 555
FatI CATG 3 cut(s) 568, 601, 1033
FauI CCCGC 1 cut(s) 472
FbaI TGATCA 1 cut(s) 1132
Fnu4HI GCNGC 1 cut(s) 390
FokI GGATG 3 cut(s) 191, 546, 751
Fsp4HI GCNGC 1 cut(s) 390
FspBI CTAG 2 cut(s) 98, 369
GlaI GCGC 2 cut(s) 483, 897
GluI GCNGC 1 cut(s) 390
GsaI CCCAGC 1 cut(s) 1203
HaeII RGCGCY 1 cut(s) 485
HaeIII GGCC 2 cut(s) 30, 63
HapII CCGG 1 cut(s) 222
HgaI GACGC 1 cut(s) 220
HhaI GCGC 2 cut(s) 484, 898
Hin1I GRCGYC 2 cut(s) 482, 544
Hin1II CATG 3 cut(s) 572, 605, 1037
Hin6I GCGC 2 cut(s) 482, 896
HinP1I GCGC 2 cut(s) 482, 896
HincII GTYRAC 1 cut(s) 555
HindII GTYRAC 1 cut(s) 555
HpaII CCGG 1 cut(s) 222
HphI GGTGA 5 cut(s) 306, 461, 683, 940, 1243
Hpy166II GTNNAC 1 cut(s) 555
Hpy188III TCNNGA 5 cut(s) 292, 563, 728, 1034, 1213
Hpy8I GTNNAC 1 cut(s) 555
Hpy99I CGWCG 4 cut(s) 38, 179, 236, 697
HpyCH4III ACNGT 3 cut(s) 418, 449, 507
HpyCH4IV ACGT 6 cut(s) 33, 94, 111, 544, 695, 1079
HpyCH4V TGCA 2 cut(s) 683, 881
HpyF10VI GCNNNNNNNGC 4 cut(s) 689, 887, 947, 1316
HpyF3I CTNAG 6 cut(s) 244, 564, 813, 822, 1122, 1149
HpySE526I ACGT 6 cut(s) 33, 94, 111, 544, 695, 1079
Hsp92I GRCGYC 2 cut(s) 482, 544
Hsp92II CATG 3 cut(s) 572, 605, 1037
HspAI GCGC 2 cut(s) 482, 896
KasI GGCGCC 1 cut(s) 481
Ksp22I TGATCA 1 cut(s) 1132
Kzo9I GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
LpnPI CCDG 7 cut(s) 66, 235, 576, 803, 972, 1028, 1185
Lsp1109I GCAGC 1 cut(s) 376
LweI GCATC 2 cut(s) 670, 1135
MaeI CTAG 2 cut(s) 98, 369
MaeII ACGT 6 cut(s) 33, 94, 111, 544, 695, 1079
MaeIII GTNAC 4 cut(s) 118, 449, 525, 1010
MalI GATC 7 cut(s) 268, 373, 471, 701, 735, 1134, 1344
MboI GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
MflI RGATCY 2 cut(s) 266, 371
MluCI AATT 6 cut(s) 83, 296, 437, 475, 953, 1226
Mly113I GGCGCC 1 cut(s) 482
MlyI GAGTC 4 cut(s) 550, 683, 775, 1051
MmeI TCCRAC 2 cut(s) 1049, 1062
MseI TTAA 4 cut(s) 329, 627, 933, 1353
MslI CAYNNNNRTG 1 cut(s) 606
MspA1I CMGCKG 2 cut(s) 389, 467
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 222
MwoI GCNNNNNNNGC 4 cut(s) 689, 887, 947, 1316
NarI GGCGCC 1 cut(s) 482
NciI CCSGG 1 cut(s) 222
NdeII GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
NlaIII CATG 3 cut(s) 572, 605, 1037
NlaIV GGNNCC 2 cut(s) 268, 483
NmuCI GTSAC 2 cut(s) 118, 449
NspV TTCGAA 1 cut(s) 1289
PagI TCATGA 1 cut(s) 1033
PcsI WCGNNNNNNNCGW 1 cut(s) 848
PkrI GCNGC 1 cut(s) 391
PleI GAGTC 4 cut(s) 550, 682, 774, 1051
PluTI GGCGCC 1 cut(s) 485
PpsI GAGTC 4 cut(s) 550, 682, 774, 1051
PspFI CCCAGC 1 cut(s) 1199
PspN4I GGNNCC 2 cut(s) 268, 483
PspPI GGNCC 1 cut(s) 704
PsuI RGATCY 2 cut(s) 266, 371
PvuII CAGCTG 1 cut(s) 389
RseI CAYNNNNRTG 1 cut(s) 606
Rsr2I CGGWCCG 1 cut(s) 704
RsrII CGGWCCG 1 cut(s) 704
SaqAI TTAA 4 cut(s) 329, 627, 933, 1353
SatI GCNGC 1 cut(s) 390
Sau3AI GATC 7 cut(s) 266, 371, 469, 699, 733, 1132, 1342
Sau96I GGNCC 1 cut(s) 704
SchI GAGTC 4 cut(s) 550, 683, 775, 1051
ScrFI CCNGG 1 cut(s) 222
SfaNI GCATC 2 cut(s) 670, 1135
SfoI GGCGCC 1 cut(s) 483
SfuI TTCGAA 1 cut(s) 1289
SinI GGWCC 1 cut(s) 704
SmiMI CAYNNNNRTG 1 cut(s) 606
SmlI CTYRAG 2 cut(s) 806, 1019
SmoI CTYRAG 2 cut(s) 806, 1019
Sse9I AATT 6 cut(s) 83, 296, 437, 475, 953, 1226
SsiI CCGC 3 cut(s) 5, 144, 465
SspDI GGCGCC 1 cut(s) 481
SspMI CTAG 2 cut(s) 98, 369
StyD4I CCNGG 1 cut(s) 220
StyI CCWWGG 1 cut(s) 350
TaaI ACNGT 3 cut(s) 418, 449, 507
TaiI ACGT 6 cut(s) 36, 97, 114, 547, 698, 1082
TaqII GACCGA 1 cut(s) 721
TasI AATT 6 cut(s) 83, 296, 437, 475, 953, 1226
Tru1I TTAA 4 cut(s) 329, 627, 933, 1353
Tru9I TTAA 4 cut(s) 329, 627, 933, 1353
TscAI CASTG 2 cut(s) 421, 1130
TseFI GTSAC 2 cut(s) 118, 449
TseI GCWGC 1 cut(s) 389
Tsp45I GTSAC 2 cut(s) 118, 449
TspDTI ATGAA 5 cut(s) 193, 618, 701, 1050, 1154
TspGWI ACGGA 3 cut(s) 163, 279, 485
TspRI CASTG 2 cut(s) 421, 1130
VpaK11BI GGWCC 1 cut(s) 704
XapI RAATTY 2 cut(s) 296, 437
XspI CTAG 2 cut(s) 98, 369
ZraI GACGTC 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.