FvH4_4g35050

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
32511917 .. 32513684
1768 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g35050.t1

Sequence Viewer

Length: 1404 bp
ATGGAGAATCCCAAACAATGCAGAGGTCATGTTGTGGTGCTTCCTTATCCTAGCCAAGGCCACATCAACCCTCTCCTCCAGTTCGCAAAGCGTCTGGCTTCTAAAGGCGTCAAGGCTACTTTCGCCACCACCAGTTACACTGTCAGCTCCATTTGTGTCCCTAACGTTGAGGTTGAACCCATCTCTGATGGTTTCGACGAGTCTGGCTTTGCTCAAGCGGCGGATGAGGAGACGTTTCTTCAGTCGTTCAAGGCCAACGGTTCGAGAACCCTATCTCAAGTCCTGAAGAAGTTCGAAGACTCTGAGTTCCCAGTGAATTGTGTTGTGTATGATTCATTTCTGCCTTGGGCTCTTGATGTGGCTAAGGAACATGGCATATATGGAGCCTCCTTTTTCACCAATTCAGCCAGTGTGTGCAGCATTCTTCTTCACATTCACCATGGTTTAATTTCTCTGCCTTTTAGTCTCGAAGACATACCCTTGTCGCTTCCTGGCTTGCCTCCGCTCGACATTGCTGACCTGCCTGGCATGCTTAAGAAGCCGGATAGTAACCCAGCTTACTTGAGGATGCAAATGAATCAGTATTCAAACTTATCCAAGGCTGACTGGATCTTTGCCAATACTTTCCAAGCACTAGAAAGCGACGCTGTCAAAGGAGTAGAAAAGCTATGGCCAGCGAAGTTGATAGGCCCTATGATCCCTTCAGCTTATTTGGATGGCCAGATTAAAGGAGATAGGGGATATGGAGCAAGCCTATGGAAGCCTCTTGGTGAAGAATGCATCAACTGGCTAGTTGCAAAGGCACCTAAATCAGTGGTGTATGTCTCCTTTGGAAGCATGGTGTCCCTGACAGCAGAGCAGATGGAAGAGTTTGCATTGGGCTTGATAGAGAGTGGGGTGCATTTCCTGTGGGTGGTAAGAGCATCAGAACTGAGTAAATTGCCAAATGAAATCATCGACTCAGTAAAGGAAAAGGGTCTGCTGGTGACTTGGTGTAACCAGCTGGAAGCGTTGGCACATGAAGCAATTGGGTATTTTGTGACTCATTGTGGTTGGAATTCGATACTCGAAGGGCTCAGCCTTGGGGTTCCGATGGTTGCAGTGCCAAAGTGGGCTGATCAAATGACCAATGCTAAGTTTGTGGAGGAGATTTGGGAGGTTGGGGTCAGAGCCAAGGAAGATGACGAGGGAATTGTGAGGAAAGAAGAGCTTGTTGGGTGTTTGAAGGAAGTTATTGAGGGAGAGAGAGGCAAAGTGATCAAGAAGAATTCAAGTAAATGGAGGGAAGTGGCTAAGAAGGAAATTAGTGAAGGGGGGAGCTCAGACAAGTGTATTAGTGAATTTGTAGAACTTCTGGTGCCTGCTAATAAGAATTCAGAGGCCAGGGCTTTCCTGAAGGATTAG
Functional Annotation

Protein Analysis

468

Amino Acids

51.45

Weight (kDa)

5.27

Isoelectric Point (pI)

33.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 11 - 48 8.7e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 249 - 416 1.6e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 528
AccB1I GGYRCC 2 cut(s) 802, 1357
AccBSI CCGCTC 1 cut(s) 505
AciI CCGC 3 cut(s) 218, 221, 503
AclI AACGTT 1 cut(s) 165
AclWI GGATC 2 cut(s) 617, 691
AcoI YGGCCR 2 cut(s) 671, 718
AcsI RAATTY 4 cut(s) 1057, 1267, 1340, 1372
AcuI CTGAAG 3 cut(s) 224, 305, 687
AcyI GRCGYC 1 cut(s) 108
AfiI CCNNNNNNNGG 2 cut(s) 56, 913
AflII CTTAAG 1 cut(s) 533
AgsI TTSAA 5 cut(s) 176, 250, 588, 1225, 1272
AjnI CCWGG 3 cut(s) 490, 523, 1382
AjuI GAANNNNNNNTTGG 2 cut(s) 1197, 1229
AluBI AGCT 7 cut(s) 147, 557, 667, 707, 1003, 1210, 1320
AluI AGCT 7 cut(s) 147, 557, 667, 707, 1003, 1210, 1320
Alw21I GWGCWC 1 cut(s) 1322
Alw26I GTCTC 3 cut(s) 224, 470, 829
AlwI GGATC 2 cut(s) 617, 691
AoxI GGCC 6 cut(s) 58, 252, 671, 688, 718, 1380
ApeKI GCWGC 1 cut(s) 417
ApoI RAATTY 4 cut(s) 1057, 1267, 1340, 1372
ArsI GACNNNNNNTTYG 2 cut(s) 596, 628
Asp700I GAANNNNTTC 1 cut(s) 290
AspS9I GGNCC 1 cut(s) 689
AsuHPI GGTGA 4 cut(s) 388, 428, 782, 997
AsuII TTCGAA 1 cut(s) 294
BalI TGGCCA 2 cut(s) 673, 720
BanI GGYRCC 2 cut(s) 802, 1357
BanII GRGCYC 3 cut(s) 352, 1077, 1322
BbsI GAAGAC 2 cut(s) 303, 477
Bbv12I GWGCWC 1 cut(s) 1322
BbvI GCAGC 1 cut(s) 429
BccI CCATC 5 cut(s) 182, 188, 710, 856, 1087
BciT130I CCWGG 3 cut(s) 492, 525, 1384
BclI TGATCA 2 cut(s) 1117, 1257
BcoDI GTCTC 3 cut(s) 224, 470, 829
BfaI CTAG 3 cut(s) 51, 635, 791
BfrI CTTAAG 1 cut(s) 533
BfuAI ACCTGC 1 cut(s) 528
BisI GCNGC 2 cut(s) 219, 418
BlpI GCTNAGC 1 cut(s) 1076
BlsI GCNGC 2 cut(s) 220, 419
Bme1390I CCNGG 3 cut(s) 492, 525, 1384
BmgT120I GGNCC 1 cut(s) 689
BmiI GGNNCC 4 cut(s) 385, 804, 1089, 1359
BmrFI CCNGG 3 cut(s) 492, 525, 1384
BmrI ACTGGG 1 cut(s) 305
BmsI GCATC 3 cut(s) 558, 789, 932
BmuI ACTGGG 1 cut(s) 305
BpiI GAAGAC 2 cut(s) 303, 477
BpmI CTGGAG 1 cut(s) 62
Bpu10I CCTNAGC 1 cut(s) 363
Bpu1102I GCTNAGC 1 cut(s) 1076
Bpu14I TTCGAA 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 198, 261, 583
BsaHI GRCGYC 1 cut(s) 108
BsaJI CCNNGG 7 cut(s) 55, 344, 439, 597, 1081, 1173, 1383
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 913
Bse1I ACTGG 6 cut(s) 79, 132, 311, 408, 611, 791
Bse3DI GCAATG 1 cut(s) 510
BseBI CCWGG 3 cut(s) 492, 525, 1384
BseDI CCNNGG 7 cut(s) 55, 344, 439, 597, 1081, 1173, 1383
BseGI GGATG 3 cut(s) 229, 573, 721
BseLI CCNNNNNNNGG 2 cut(s) 56, 913
BseMI GCAATG 1 cut(s) 510
BseMII CTCAG 5 cut(s) 294, 923, 975, 1090, 1335
BseNI ACTGG 6 cut(s) 79, 132, 311, 408, 611, 791
BseRI GAGGAG 3 cut(s) 65, 242, 1160
BseXI GCAGC 1 cut(s) 429
BseYI CCCAGC 1 cut(s) 553
BsgI GTGCAG 1 cut(s) 436
BshFI GGCC 6 cut(s) 60, 254, 673, 690, 720, 1382
BshNI GGYRCC 2 cut(s) 802, 1357
BsiHKAI GWGCWC 1 cut(s) 1322
BsiSI CCGG 1 cut(s) 542
BslFI GGGAC 2 cut(s) 143, 829
BslI CCNNNNNNNGG 2 cut(s) 56, 913
BsmAI GTCTC 3 cut(s) 224, 470, 829
BsmBI CGTCTC 1 cut(s) 224
BsmFI GGGAC 2 cut(s) 143, 829
BsmI GAATGC 2 cut(s) 420, 782
BsnI GGCC 6 cut(s) 60, 254, 673, 690, 720, 1382
Bsp119I TTCGAA 1 cut(s) 294
Bsp1286I GDGCHC 3 cut(s) 352, 1077, 1322
Bsp143I GATC 4 cut(s) 609, 696, 1117, 1257
Bsp1720I GCTNAGC 1 cut(s) 1076
Bsp19I CCATGG 1 cut(s) 439
BspACI CCGC 3 cut(s) 218, 221, 503
BspANI GGCC 6 cut(s) 60, 254, 673, 690, 720, 1382
BspCNI CTCAG 5 cut(s) 295, 924, 974, 1089, 1334
BspLI GGNNCC 4 cut(s) 385, 804, 1089, 1359
BspMI ACCTGC 1 cut(s) 528
BspPI GGATC 2 cut(s) 617, 691
BspQI GCTCTTC 1 cut(s) 1200
BspT104I TTCGAA 1 cut(s) 294
BspT107I GGYRCC 2 cut(s) 802, 1357
BspTI CTTAAG 1 cut(s) 533
BsrBI CCGCTC 1 cut(s) 505
BsrDI GCAATG 1 cut(s) 510
BsrI ACTGG 6 cut(s) 79, 132, 311, 408, 611, 791
BssECI CCNNGG 7 cut(s) 55, 344, 439, 597, 1081, 1173, 1383
BssMI GATC 4 cut(s) 609, 696, 1117, 1257
BssNI GRCGYC 1 cut(s) 108
BssT1I CCWWGG 6 cut(s) 55, 344, 439, 597, 1081, 1173
Bst2UI CCWGG 3 cut(s) 492, 525, 1384
Bst4CI ACNGT 2 cut(s) 142, 260
Bst6I CTCTTC 2 cut(s) 861, 1200
BstACI GRCGYC 1 cut(s) 108
BstAFI CTTAAG 1 cut(s) 533
BstBI TTCGAA 1 cut(s) 294
BstC8I GCNNGC 5 cut(s) 497, 530, 675, 751, 1362
BstDEI CTNAG 8 cut(s) 303, 363, 932, 961, 1076, 1134, 1293, 1321
BstDSI CCRYGG 1 cut(s) 439
BstENI CCTNNNNNAGG 1 cut(s) 54
BstF5I GGATG 3 cut(s) 229, 573, 721
BstKTI GATC 4 cut(s) 612, 699, 1120, 1260
BstMAI GTCTC 3 cut(s) 224, 470, 829
BstMBI GATC 4 cut(s) 609, 696, 1117, 1257
BstMWI GCNNNNNNNGC 5 cut(s) 122, 218, 529, 538, 1022
BstNI CCWGG 3 cut(s) 492, 525, 1384
BstNSI RCATGY 1 cut(s) 532
BstSCI CCNGG 3 cut(s) 490, 523, 1382
BstV1I GCAGC 1 cut(s) 429
BstV2I GAAGAC 2 cut(s) 303, 477
BstX2I RGATCY 1 cut(s) 609
BstYI RGATCY 1 cut(s) 609
BsuRI GGCC 6 cut(s) 60, 254, 673, 690, 720, 1382
BtgI CCRYGG 1 cut(s) 439
BtsCI GGATG 3 cut(s) 229, 573, 721
BtsI GCAGTG 1 cut(s) 1107
BtsIMutI CAGTG 5 cut(s) 138, 318, 415, 819, 1107
BveI ACCTGC 1 cut(s) 528
Cac8I GCNNGC 5 cut(s) 497, 530, 675, 751, 1362
Cfr13I GGNCC 1 cut(s) 689
CseI GACGC 3 cut(s) 80, 97, 653
CviAII CATG 6 cut(s) 29, 371, 440, 529, 838, 1019
DdeI CTNAG 8 cut(s) 303, 363, 932, 961, 1076, 1134, 1293, 1321
DpnI GATC 4 cut(s) 611, 698, 1119, 1259
DpnII GATC 4 cut(s) 609, 696, 1117, 1257
EaeI YGGCCR 2 cut(s) 671, 718
Eam1104I CTCTTC 2 cut(s) 861, 1200
EarI CTCTTC 2 cut(s) 861, 1200
EciI GGCGGA 1 cut(s) 236
Ecl136II GAGCTC 1 cut(s) 1320
Eco130I CCWWGG 6 cut(s) 55, 344, 439, 597, 1081, 1173
Eco24I GRGCYC 3 cut(s) 352, 1077, 1322
Eco53kI GAGCTC 1 cut(s) 1320
Eco57I CTGAAG 3 cut(s) 224, 305, 687
EcoICRI GAGCTC 1 cut(s) 1320
EcoNI CCTNNNNNAGG 1 cut(s) 54
EcoO109I RGGNCCY 1 cut(s) 689
EcoRI GAATTC 3 cut(s) 1057, 1267, 1372
EcoRII CCWGG 3 cut(s) 490, 523, 1382
EcoT14I CCWWGG 6 cut(s) 55, 344, 439, 597, 1081, 1173
EcoT22I ATGCAT 1 cut(s) 782
EcoT38I GRGCYC 3 cut(s) 352, 1077, 1322
ErhI CCWWGG 6 cut(s) 55, 344, 439, 597, 1081, 1173
Esp3I CGTCTC 1 cut(s) 224
FaeI CATG 6 cut(s) 32, 374, 443, 532, 841, 1022
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 2 cut(s) 143, 829
FatI CATG 6 cut(s) 28, 370, 439, 528, 837, 1018
FbaI TGATCA 2 cut(s) 1117, 1257
Fnu4HI GCNGC 2 cut(s) 219, 418
FokI GGATG 3 cut(s) 236, 580, 728
FriOI GRGCYC 3 cut(s) 352, 1077, 1322
Fsp4HI GCNGC 2 cut(s) 219, 418
FspBI CTAG 3 cut(s) 51, 635, 791
GluI GCNGC 2 cut(s) 219, 418
GsaI CCCAGC 1 cut(s) 557
GsuI CTGGAG 1 cut(s) 62
HaeIII GGCC 6 cut(s) 60, 254, 673, 690, 720, 1382
HapII CCGG 1 cut(s) 542
HgaI GACGC 3 cut(s) 80, 97, 653
Hin1I GRCGYC 1 cut(s) 108
Hin1II CATG 6 cut(s) 32, 374, 443, 532, 841, 1022
HinfI GANTC 7 cut(s) 7, 200, 299, 332, 577, 959, 1042
HpaII CCGG 1 cut(s) 542
HphI GGTGA 4 cut(s) 388, 428, 782, 997
Hpy188I TCNGA 7 cut(s) 187, 304, 928, 1092, 1169, 1324, 1378
Hpy188III TCNNGA 6 cut(s) 264, 283, 353, 467, 1261, 1393
Hpy99I CGWCG 2 cut(s) 200, 647
HpyAV CCTTC 6 cut(s) 711, 1064, 1219, 1291, 1304, 1390
HpyCH4III ACNGT 2 cut(s) 142, 260
HpyCH4IV ACGT 2 cut(s) 165, 233
HpyCH4V TGCA 8 cut(s) 21, 417, 571, 780, 797, 875, 901, 1100
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 218, 529, 538, 1022
HpyF3I CTNAG 8 cut(s) 303, 363, 932, 961, 1076, 1134, 1293, 1321
HpySE526I ACGT 2 cut(s) 165, 233
Hsp92I GRCGYC 1 cut(s) 108
Hsp92II CATG 6 cut(s) 32, 374, 443, 532, 841, 1022
Ksp22I TGATCA 2 cut(s) 1117, 1257
Kzo9I GATC 4 cut(s) 609, 696, 1117, 1257
LguI GCTCTTC 1 cut(s) 1200
LmnI GCTCC 4 cut(s) 152, 383, 746, 1317
Lsp1109I GCAGC 1 cut(s) 429
LweI GCATC 3 cut(s) 558, 789, 932
MaeI CTAG 3 cut(s) 51, 635, 791
MaeII ACGT 2 cut(s) 165, 233
MaeIII GTNAC 5 cut(s) 134, 548, 985, 995, 1039
MalI GATC 4 cut(s) 611, 698, 1119, 1259
MbiI CCGCTC 1 cut(s) 505
MboI GATC 4 cut(s) 609, 696, 1117, 1257
MfeI CAATTG 1 cut(s) 1026
MflI RGATCY 1 cut(s) 609
MhlI GDGCHC 3 cut(s) 352, 1077, 1322
MlsI TGGCCA 2 cut(s) 673, 720
MluNI TGGCCA 2 cut(s) 673, 720
MlyI GAGTC 4 cut(s) 209, 293, 953, 1036
MmeI TCCRAC 1 cut(s) 1034
Mox20I TGGCCA 2 cut(s) 673, 720
Mph1103I ATGCAT 1 cut(s) 782
MroXI GAANNNNTTC 1 cut(s) 290
MscI TGGCCA 2 cut(s) 673, 720
MseI TTAA 3 cut(s) 446, 534, 726
Msp20I TGGCCA 2 cut(s) 673, 720
MspA1I CMGCKG 1 cut(s) 1003
MspCI CTTAAG 1 cut(s) 533
MspI CCGG 1 cut(s) 542
MspR9I CCNGG 3 cut(s) 492, 525, 1384
MunI CAATTG 1 cut(s) 1026
Mva1269I GAATGC 2 cut(s) 420, 782
MvaI CCWGG 3 cut(s) 492, 525, 1384
MwoI GCNNNNNNNGC 5 cut(s) 122, 218, 529, 538, 1022
NcoI CCATGG 1 cut(s) 439
NdeII GATC 4 cut(s) 609, 696, 1117, 1257
NlaIII CATG 6 cut(s) 32, 374, 443, 532, 841, 1022
NlaIV GGNNCC 4 cut(s) 385, 804, 1089, 1359
NmuCI GTSAC 2 cut(s) 985, 1039
NsiI ATGCAT 1 cut(s) 782
NspI RCATGY 1 cut(s) 532
NspV TTCGAA 1 cut(s) 294
PaeI GCATGC 1 cut(s) 532
PciSI GCTCTTC 1 cut(s) 1200
PctI GAATGC 2 cut(s) 420, 782
PdmI GAANNNNTTC 1 cut(s) 290
PfeI GAWTC 3 cut(s) 7, 332, 577
PflFI GACNNNGTC 1 cut(s) 647
PkrI GCNGC 2 cut(s) 220, 419
PleI GAGTC 4 cut(s) 208, 293, 953, 1036
PpsI GAGTC 4 cut(s) 208, 293, 953, 1036
Psp124BI GAGCTC 1 cut(s) 1322
Psp1406I AACGTT 1 cut(s) 165
Psp6I CCWGG 3 cut(s) 490, 523, 1382
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 3 cut(s) 490, 523, 1382
PspN4I GGNNCC 4 cut(s) 385, 804, 1089, 1359
PspPI GGNCC 1 cut(s) 689
PsuI RGATCY 1 cut(s) 609
PsyI GACNNNGTC 1 cut(s) 647
PvuII CAGCTG 1 cut(s) 1003
SacI GAGCTC 1 cut(s) 1322
SapI GCTCTTC 1 cut(s) 1200
SaqAI TTAA 3 cut(s) 446, 534, 726
SatI GCNGC 2 cut(s) 219, 418
Sau3AI GATC 4 cut(s) 609, 696, 1117, 1257
Sau96I GGNCC 1 cut(s) 689
SchI GAGTC 4 cut(s) 209, 293, 953, 1036
ScrFI CCNGG 3 cut(s) 492, 525, 1384
SduI GDGCHC 3 cut(s) 352, 1077, 1322
SfaNI GCATC 3 cut(s) 558, 789, 932
SfuI TTCGAA 1 cut(s) 294
SmlI CTYRAG 4 cut(s) 213, 276, 533, 562
SmoI CTYRAG 4 cut(s) 213, 276, 533, 562
SphI GCATGC 1 cut(s) 532
SsiI CCGC 3 cut(s) 218, 221, 503
SspMI CTAG 3 cut(s) 51, 635, 791
SstI GAGCTC 1 cut(s) 1322
StyD4I CCNGG 3 cut(s) 490, 523, 1382
StyI CCWWGG 6 cut(s) 55, 344, 439, 597, 1081, 1173
TaaI ACNGT 2 cut(s) 142, 260
TaiI ACGT 2 cut(s) 168, 236
TaqI TCGA 8 cut(s) 195, 263, 294, 468, 507, 957, 1061, 1068
TauI GCSGC 1 cut(s) 221
TfiI GAWTC 3 cut(s) 7, 332, 577
Tru1I TTAA 3 cut(s) 446, 534, 726
Tru9I TTAA 3 cut(s) 446, 534, 726
TscAI CASTG 5 cut(s) 145, 318, 415, 819, 1107
TseFI GTSAC 2 cut(s) 985, 1039
TseI GCWGC 1 cut(s) 417
Tsp45I GTSAC 2 cut(s) 985, 1039
TspDTI ATGAA 4 cut(s) 324, 590, 963, 1035
TspRI CASTG 5 cut(s) 145, 318, 415, 819, 1107
Tth111I GACNNNGTC 1 cut(s) 647
Vha464I CTTAAG 1 cut(s) 533
XagI CCTNNNNNAGG 1 cut(s) 54
XapI RAATTY 4 cut(s) 1057, 1267, 1340, 1372
XceI RCATGY 1 cut(s) 532
XmnI GAANNNNTTC 1 cut(s) 290
XspI CTAG 3 cut(s) 51, 635, 791
Zsp2I ATGCAT 1 cut(s) 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.