RLG00000005817

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
2066043 .. 2067819
1777 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005817

Sequence Viewer

Length: 1404 bp
ATGGAGAGCAATAGAGAATACAGAGGTCATGTTGTGGTGCTTCCTTATCCTAGCCAGGGCCACATCAACCCTCTCCTCCAATTTGCAAAGCGCCTAGCCTCTAAAGGCGTCAAGGCCACACTAGCCACAACCAGCTACACTGTCAGCTCCATTAGCGTCCACAACATAGGAGTCGAGTCCATCTCCGATGGTTTCGACGAGTCTGGTTTTGCTCAAGCGGCCGACGAGGAAAGATTTCTTCAGTCGTTCAAGGCCAATGGCTCGAGAACCCTATCCCAAGTCCTGAAGAAGTTTGAAAACTCCGAGTTCCCGGTGAATTGTGTTGTGTATGATTCCTTTCTGCCTTGGGCTCTTGATGTGGCCAAGGAACATGGCATATATGGAGCCACTTTTTTCACCAATTCGGCTACTGTGTGTTGCATTGTGTGTCAAATTCATCATGGACTGCTTTCTCTGCCGTTTAAGCCTAAAGACATGCCCTTGTTGATTCCTGGCCTGCCTCCACTGAACCTTCTTGACCTGCCAAGTATGCTTCAGAAGCCAGATAGTCACCCAGCTTACTTGAAGATGAAATTGAACCAGTATTCTAACTTGGACGAGGCTGACTGGATCTTTGGAAATACTTTCCAAGCACTAGAAGGCGAGGCTGCCAAAGGAGTAGCAAAGCTGTGGCCAGCAAAGTTGATTGGCCCTATGGTCCCTTCAGCTTATTTGGATGGTCAGATCAAAGGGGATAGAGGATATGGAGCAAGCCTATGGAAGCCTCTTGGTGAAGAATGCATCAAATGGCTAGAAGCAAAGGCACCTAAATCAGTGGTGTATGTCTCCTTTGGAAGCATGGTGTCCCTGACAGCAGAGCAGATGGAAGAGTTTGCGTTGGGCTTGAAAGAAAGTGGGGTGCACTTTCTGTGGGTGGTAAGAGCATCTGAACTGAGTAAATTGCCGAATGAAATCATTGACTCAGTAAAGGGTCTACTAGTGACTTGGTGTAACCAGCTGGAAGCTTTGGCGCATGATGCAATTGGGTGCTTTGTGACTCATTGTGGTTGGAATTCGATTCTTGAAGGGCTCAGCCTTGGGGTTCCAATGGTTGCAGTGCCAAAGTGGGCTGATCAAATGACCAATGCTAAGTTTGTGGAGGAGATTTGGAAGGTTGGAGTCAGAGCCAAGGAAGATGATGGGGGAATTGTGAGGAAAGAAGAATTTGTTGGGTGTCTGAAGGAAGTGATGGAGGGAGAGAGAAGCAAAGAGATTAAGAAGAATTCGAGTAAATGGAGGGAGTTAGCTAAGAAGGAAATCAGTGAGGGGGGAAGCTCAGACAAGTGTATTAGTGAATTTGTAGCGCATTTGTGTGCTGATCAGACAAGAGAGGTCAAGACATTCCTGAATGACAAGGATTATTGA
Functional Annotation

Protein Analysis

468

Amino Acids

51.66

Weight (kDa)

5.85

Isoelectric Point (pI)

30.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 11 - 49 3.9e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 250 - 417 3.3e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 528
AccB1I GGYRCC 1 cut(s) 802
AccI GTMKAC 1 cut(s) 973
AciI CCGC 1 cut(s) 218
AclWI GGATC 1 cut(s) 617
AcoI YGGCCR 3 cut(s) 219, 360, 671
AcsI RAATTY 5 cut(s) 432, 1051, 1202, 1261, 1334
AcuI CTGAAG 5 cut(s) 224, 305, 518, 687, 1238
AcyI GRCGYC 1 cut(s) 108
AfiI CCNNNNNNNGG 1 cut(s) 56
AgsI TTSAA 6 cut(s) 250, 296, 565, 577, 886, 1064
AhlI ACTAGT 1 cut(s) 976
AjnI CCWGG 2 cut(s) 54, 490
AjuI GAANNNNNNNTTGG 2 cut(s) 1191, 1223
AluBI AGCT 9 cut(s) 135, 147, 557, 667, 707, 997, 1004, 1286, 1314
AluI AGCT 9 cut(s) 135, 147, 557, 667, 707, 997, 1004, 1286, 1314
Alw21I GWGCWC 1 cut(s) 903
Alw26I GTCTC 1 cut(s) 829
Alw44I GTGCAC 1 cut(s) 899
AlwI GGATC 1 cut(s) 617
Ama87I CYCGRG 1 cut(s) 262
AoxI GGCC 8 cut(s) 58, 114, 219, 252, 360, 493, 671, 688
ApaLI GTGCAC 1 cut(s) 899
ApeKI GCWGC 1 cut(s) 647
ApoI RAATTY 5 cut(s) 432, 1051, 1202, 1261, 1334
ArsI GACNNNNNNTTYG 2 cut(s) 596, 628
Asp700I GAANNNNTTC 1 cut(s) 234
AspLEI GCGC 3 cut(s) 93, 1012, 1345
AspS9I GGNCC 3 cut(s) 58, 689, 697
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 4 cut(s) 325, 388, 542, 782
AvaI CYCGRG 1 cut(s) 262
AvaII GGWCC 1 cut(s) 697
BaeGI GKGCMC 1 cut(s) 903
BalI TGGCCA 2 cut(s) 362, 673
BanI GGYRCC 1 cut(s) 802
BanII GRGCYC 2 cut(s) 352, 1071
Bbv12I GWGCWC 1 cut(s) 903
BbvI GCAGC 1 cut(s) 634
BccI CCATC 6 cut(s) 182, 188, 710, 856, 1172, 1222
BceAI ACGGC 1 cut(s) 442
BciT130I CCWGG 2 cut(s) 56, 492
BclI TGATCA 2 cut(s) 1111, 1357
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 1 cut(s) 829
BcuI ACTAGT 1 cut(s) 976
BfaI CTAG 6 cut(s) 51, 95, 122, 635, 791, 977
BfoI RGCGCY 1 cut(s) 94
BfuAI ACCTGC 1 cut(s) 528
BisI GCNGC 2 cut(s) 219, 648
BlpI GCTNAGC 1 cut(s) 1070
BlsI GCNGC 2 cut(s) 220, 649
Bme1390I CCNGG 3 cut(s) 56, 311, 492
Bme18I GGWCC 1 cut(s) 697
BmeT110I CYCGRG 1 cut(s) 262
BmgT120I GGNCC 3 cut(s) 58, 689, 697
BmiI GGNNCC 4 cut(s) 385, 699, 804, 1083
BmrFI CCNGG 3 cut(s) 56, 311, 492
BmsI GCATC 3 cut(s) 789, 932, 1006
BplI GAGNNNNNCTC 2 cut(s) 167, 199
Bpu1102I GCTNAGC 1 cut(s) 1070
BpuEI CTTGAG 1 cut(s) 198
BpuMI CCSGG 1 cut(s) 311
BsaHI GRCGYC 1 cut(s) 108
BsaJI CCNNGG 5 cut(s) 55, 344, 363, 1075, 1167
Bsc4I CCNNNNNNNGG 1 cut(s) 56
Bse1I ACTGG 2 cut(s) 580, 611
BseBI CCWGG 2 cut(s) 56, 492
BseDI CCNNGG 5 cut(s) 55, 344, 363, 1075, 1167
BseGI GGATG 1 cut(s) 721
BseLI CCNNNNNNNGG 1 cut(s) 56
BseMII CTCAG 4 cut(s) 923, 975, 1084, 1329
BseNI ACTGG 2 cut(s) 580, 611
BseRI GAGGAG 2 cut(s) 65, 1154
BseSI GKGCMC 1 cut(s) 903
BseX3I CGGCCG 1 cut(s) 219
BseXI GCAGC 1 cut(s) 634
BseYI CCCAGC 1 cut(s) 553
Bsh1285I CGRYCG 1 cut(s) 222
BshFI GGCC 8 cut(s) 60, 116, 221, 254, 362, 495, 673, 690
BshNI GGYRCC 1 cut(s) 802
BsiEI CGRYCG 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 903
BsiHKCI CYCGRG 1 cut(s) 262
BsiSI CCGG 1 cut(s) 311
BslFI GGGAC 2 cut(s) 683, 829
BslI CCNNNNNNNGG 1 cut(s) 56
BsmAI GTCTC 1 cut(s) 829
BsmFI GGGAC 2 cut(s) 683, 829
BsmI GAATGC 1 cut(s) 782
BsnI GGCC 8 cut(s) 60, 116, 221, 254, 362, 495, 673, 690
BsoBI CYCGRG 1 cut(s) 262
Bsp1286I GDGCHC 3 cut(s) 352, 903, 1071
Bsp143I GATC 4 cut(s) 609, 723, 1111, 1357
Bsp1720I GCTNAGC 1 cut(s) 1070
BspACI CCGC 1 cut(s) 218
BspANI GGCC 8 cut(s) 60, 116, 221, 254, 362, 495, 673, 690
BspCNI CTCAG 4 cut(s) 924, 974, 1083, 1328
BspLI GGNNCC 4 cut(s) 385, 699, 804, 1083
BspMI ACCTGC 1 cut(s) 528
BspPI GGATC 1 cut(s) 617
BspT107I GGYRCC 1 cut(s) 802
BsrI ACTGG 2 cut(s) 580, 611
BssECI CCNNGG 5 cut(s) 55, 344, 363, 1075, 1167
BssMI GATC 4 cut(s) 609, 723, 1111, 1357
BssNI GRCGYC 1 cut(s) 108
BssT1I CCWWGG 4 cut(s) 344, 363, 1075, 1167
Bst2UI CCWGG 2 cut(s) 56, 492
Bst4CI ACNGT 2 cut(s) 142, 412
Bst6I CTCTTC 1 cut(s) 861
BstACI GRCGYC 1 cut(s) 108
BstC8I GCNNGC 3 cut(s) 497, 675, 751
BstDEI CTNAG 6 cut(s) 932, 961, 1070, 1128, 1287, 1315
BstF5I GGATG 1 cut(s) 721
BstH2I RGCGCY 1 cut(s) 94
BstHHI GCGC 3 cut(s) 93, 1012, 1345
BstKTI GATC 4 cut(s) 612, 726, 1114, 1360
BstMAI GTCTC 1 cut(s) 829
BstMBI GATC 4 cut(s) 609, 723, 1111, 1357
BstMCI CGRYCG 1 cut(s) 222
BstMWI GCNNNNNNNGC 8 cut(s) 122, 153, 218, 454, 463, 529, 538, 1016
BstNI CCWGG 2 cut(s) 56, 492
BstNSI RCATGY 1 cut(s) 478
BstSCI CCNGG 3 cut(s) 54, 309, 490
BstSLI GKGCMC 1 cut(s) 903
BstV1I GCAGC 1 cut(s) 634
BstX2I RGATCY 1 cut(s) 609
BstYI RGATCY 1 cut(s) 609
BstZI CGGCCG 1 cut(s) 219
BsuRI GGCC 8 cut(s) 60, 116, 221, 254, 362, 495, 673, 690
BtsCI GGATG 1 cut(s) 721
BtsI GCAGTG 1 cut(s) 1101
BtsIMutI CAGTG 5 cut(s) 138, 503, 819, 1101, 1306
BveI ACCTGC 1 cut(s) 528
Cac8I GCNNGC 3 cut(s) 497, 675, 751
CfoI GCGC 3 cut(s) 93, 1012, 1345
Cfr13I GGNCC 3 cut(s) 58, 689, 697
CseI GACGC 2 cut(s) 97, 145
CviAII CATG 6 cut(s) 29, 371, 440, 475, 838, 1013
DdeI CTNAG 6 cut(s) 932, 961, 1070, 1128, 1287, 1315
DpnI GATC 4 cut(s) 611, 725, 1113, 1359
DpnII GATC 4 cut(s) 609, 723, 1111, 1357
EaeI YGGCCR 3 cut(s) 219, 360, 671
EagI CGGCCG 1 cut(s) 219
Eam1104I CTCTTC 1 cut(s) 861
EarI CTCTTC 1 cut(s) 861
EclXI CGGCCG 1 cut(s) 219
Eco130I CCWWGG 4 cut(s) 344, 363, 1075, 1167
Eco24I GRGCYC 2 cut(s) 352, 1071
Eco47I GGWCC 1 cut(s) 697
Eco52I CGGCCG 1 cut(s) 219
Eco57I CTGAAG 5 cut(s) 224, 305, 518, 687, 1238
Eco88I CYCGRG 1 cut(s) 262
EcoRI GAATTC 2 cut(s) 1051, 1261
EcoRII CCWGG 2 cut(s) 54, 490
EcoT14I CCWWGG 4 cut(s) 344, 363, 1075, 1167
EcoT22I ATGCAT 1 cut(s) 782
EcoT38I GRGCYC 2 cut(s) 352, 1071
ErhI CCWWGG 4 cut(s) 344, 363, 1075, 1167
FaeI CATG 6 cut(s) 32, 374, 443, 478, 841, 1016
FaqI GGGAC 2 cut(s) 683, 829
FatI CATG 6 cut(s) 28, 370, 439, 474, 837, 1012
FbaI TGATCA 2 cut(s) 1111, 1357
FblI GTMKAC 1 cut(s) 973
Fnu4HI GCNGC 2 cut(s) 219, 648
FokI GGATG 1 cut(s) 728
FriOI GRGCYC 2 cut(s) 352, 1071
Fsp4HI GCNGC 2 cut(s) 219, 648
FspBI CTAG 6 cut(s) 51, 95, 122, 635, 791, 977
GlaI GCGC 3 cut(s) 92, 1011, 1344
GluI GCNGC 2 cut(s) 219, 648
GsaI CCCAGC 1 cut(s) 557
HaeII RGCGCY 1 cut(s) 94
HaeIII GGCC 8 cut(s) 60, 116, 221, 254, 362, 495, 673, 690
HapII CCGG 1 cut(s) 311
HgaI GACGC 2 cut(s) 97, 145
HhaI GCGC 3 cut(s) 93, 1012, 1345
Hin1I GRCGYC 1 cut(s) 108
Hin1II CATG 6 cut(s) 32, 374, 443, 478, 841, 1016
Hin6I GCGC 3 cut(s) 91, 1010, 1343
HinP1I GCGC 3 cut(s) 91, 1010, 1343
HindIII AAGCTT 1 cut(s) 1002
HinfI GANTC 9 cut(s) 171, 176, 200, 332, 487, 959, 1036, 1057, 1158
HpaII CCGG 1 cut(s) 311
HphI GGTGA 4 cut(s) 325, 388, 542, 782
Hpy166II GTNNAC 3 cut(s) 160, 901, 974
Hpy188I TCNGA 9 cut(s) 187, 304, 537, 723, 928, 1163, 1218, 1318, 1362
Hpy188III TCNNGA 7 cut(s) 264, 283, 353, 515, 1061, 1375, 1384
Hpy8I GTNNAC 3 cut(s) 160, 901, 974
Hpy99I CGWCG 2 cut(s) 200, 227
HpyAV CCTTC 7 cut(s) 521, 632, 711, 1058, 1144, 1213, 1285
HpyCH4III ACNGT 2 cut(s) 142, 412
HpyCH4V TGCA 6 cut(s) 86, 420, 780, 901, 1019, 1094
HpyF10VI GCNNNNNNNGC 8 cut(s) 122, 153, 218, 454, 463, 529, 538, 1016
HpyF3I CTNAG 6 cut(s) 932, 961, 1070, 1128, 1287, 1315
Hsp92I GRCGYC 1 cut(s) 108
Hsp92II CATG 6 cut(s) 32, 374, 443, 478, 841, 1016
HspAI GCGC 3 cut(s) 91, 1010, 1343
Ksp22I TGATCA 2 cut(s) 1111, 1357
Kzo9I GATC 4 cut(s) 609, 723, 1111, 1357
LmnI GCTCC 3 cut(s) 152, 383, 746
Lsp1109I GCAGC 1 cut(s) 634
LweI GCATC 3 cut(s) 789, 932, 1006
MaeI CTAG 6 cut(s) 51, 95, 122, 635, 791, 977
MaeIII GTNAC 4 cut(s) 548, 979, 989, 1033
MalI GATC 4 cut(s) 611, 725, 1113, 1359
MboI GATC 4 cut(s) 609, 723, 1111, 1357
MboII GAAGA 8 cut(s) 230, 298, 577, 785, 878, 1184, 1211, 1270
MfeI CAATTG 1 cut(s) 1020
MflI RGATCY 1 cut(s) 609
MhlI GDGCHC 3 cut(s) 352, 903, 1071
MlsI TGGCCA 2 cut(s) 362, 673
MluNI TGGCCA 2 cut(s) 362, 673
MlyI GAGTC 6 cut(s) 180, 185, 209, 953, 1030, 1167
MmeI TCCRAC 2 cut(s) 1028, 1135
Mox20I TGGCCA 2 cut(s) 362, 673
Mph1103I ATGCAT 1 cut(s) 782
MroXI GAANNNNTTC 1 cut(s) 234
MscI TGGCCA 2 cut(s) 362, 673
MseI TTAA 2 cut(s) 462, 1254
MslI CAYNNNNRTG 1 cut(s) 1350
Msp20I TGGCCA 2 cut(s) 362, 673
MspA1I CMGCKG 1 cut(s) 997
MspI CCGG 1 cut(s) 311
MspR9I CCNGG 3 cut(s) 56, 311, 492
MunI CAATTG 1 cut(s) 1020
Mva1269I GAATGC 1 cut(s) 782
MvaI CCWGG 2 cut(s) 56, 492
MwoI GCNNNNNNNGC 8 cut(s) 122, 153, 218, 454, 463, 529, 538, 1016
NciI CCSGG 1 cut(s) 311
NdeII GATC 4 cut(s) 609, 723, 1111, 1357
NlaIII CATG 6 cut(s) 32, 374, 443, 478, 841, 1016
NlaIV GGNNCC 4 cut(s) 385, 699, 804, 1083
NmuCI GTSAC 3 cut(s) 548, 979, 1033
NsiI ATGCAT 1 cut(s) 782
NspI RCATGY 1 cut(s) 478
PaeR7I CTCGAG 1 cut(s) 262
PctI GAATGC 1 cut(s) 782
PdmI GAANNNNTTC 1 cut(s) 234
PfeI GAWTC 3 cut(s) 332, 487, 1057
PkrI GCNGC 2 cut(s) 220, 649
PleI GAGTC 6 cut(s) 179, 184, 208, 953, 1030, 1166
PpsI GAGTC 6 cut(s) 179, 184, 208, 953, 1030, 1166
Psp6I CCWGG 2 cut(s) 54, 490
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 2 cut(s) 54, 490
PspN4I GGNNCC 4 cut(s) 385, 699, 804, 1083
PspPI GGNCC 3 cut(s) 58, 689, 697
PsuI RGATCY 1 cut(s) 609
PvuII CAGCTG 1 cut(s) 997
RseI CAYNNNNRTG 1 cut(s) 1350
SaqAI TTAA 2 cut(s) 462, 1254
SatI GCNGC 2 cut(s) 219, 648
Sau3AI GATC 4 cut(s) 609, 723, 1111, 1357
Sau96I GGNCC 3 cut(s) 58, 689, 697
SchI GAGTC 6 cut(s) 180, 185, 209, 953, 1030, 1167
ScrFI CCNGG 3 cut(s) 56, 311, 492
SduI GDGCHC 3 cut(s) 352, 903, 1071
SfaNI GCATC 3 cut(s) 789, 932, 1006
Sfr274I CTCGAG 1 cut(s) 262
SinI GGWCC 1 cut(s) 697
SlaI CTCGAG 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 1350
SmlI CTYRAG 2 cut(s) 213, 262
SmoI CTYRAG 2 cut(s) 213, 262
SpeI ACTAGT 1 cut(s) 976
SsiI CCGC 1 cut(s) 218
SspMI CTAG 6 cut(s) 51, 95, 122, 635, 791, 977
StyD4I CCNGG 3 cut(s) 54, 309, 490
StyI CCWWGG 4 cut(s) 344, 363, 1075, 1167
TaaI ACNGT 2 cut(s) 142, 412
TaqI TCGA 5 cut(s) 174, 195, 263, 1055, 1265
TauI GCSGC 1 cut(s) 221
TfiI GAWTC 3 cut(s) 332, 487, 1057
Tru1I TTAA 2 cut(s) 462, 1254
Tru9I TTAA 2 cut(s) 462, 1254
TscAI CASTG 5 cut(s) 145, 510, 819, 1101, 1306
TseFI GTSAC 3 cut(s) 548, 979, 1033
TseI GCWGC 1 cut(s) 647
Tsp45I GTSAC 3 cut(s) 548, 979, 1033
TspDTI ATGAA 3 cut(s) 425, 584, 963
TspRI CASTG 5 cut(s) 145, 510, 819, 1101, 1306
VneI GTGCAC 1 cut(s) 899
VpaK11BI GGWCC 1 cut(s) 697
XapI RAATTY 5 cut(s) 432, 1051, 1202, 1261, 1334
XceI RCATGY 1 cut(s) 478
XhoI CTCGAG 1 cut(s) 262
XmiI GTMKAC 1 cut(s) 973
XmnI GAANNNNTTC 1 cut(s) 234
XspI CTAG 6 cut(s) 51, 95, 122, 635, 791, 977
Zsp2I ATGCAT 1 cut(s) 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.