AT1G26700

May be involved in modulation of pathogen defense and leaf cell death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008350
Physical Location & Seq
Forward (+)
9227378 .. 9232437
5060 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26700.2

Sequence Viewer

Length: 1665 bp
ATGAGAGAAGAAACAGAACCAAGCGAGAGAACGTTGGGTTTAACACCAACTTGGTCAGTTGCTACAGTATTGACTATCTTTGTATTTGTTTCTTTGATCGTTGAACGTTCCATTCATCGGCTTAGTAACTGGTTGCAAAAGACTAAGAGAAAACCTTTGTTTGCTGCATTGGAGAAAATGAAAGAAGAGCTGATGCTGCTCGGATTCATATCGCTTCTTCTTACAGCTACCTCTAGCACAATAGCTAACATATGCGTCTCTTCAAGTTTCCACAACGATAGATTTGTCCCATGTACGCCTTCTGAGATTAATGAGGAACTTGAAAGTACTATTTCTACTGTCAAGCGGACTCAGTTAACGAGATCTCTCTTCTTGCACACTCTGAGGAGAAGATTGAGTGGTATAGGAGAGGATACGTGCAGCGAGGGGCATGAGCCATTTCTTTCATATGAAGGCATGGAACAATTGCATCGCTTCATATTTATAATGGCAGTCACTCATGTAACTTACAGCTGCTTGACAATGCTTCTTGCAATCGTGAAGATTCATAGATGGAGGATATGGGAAGACGAGGTTCATATGGATCGAAATGATTGCTTAACTGTGGTTGCACGCGAAAAGATTTTCCGAAGGCAAACAACATTTGTCCAGTATCATACATCTGCTCCTCTGGTCAAGAATAGATTACTTATATGGGTGATATGTTTCTTCAGACAGTTTGGACATTCTGTTGTTCGTTCTGACTATCTTACACTCCGAAAGGGATTCATCATGAACCATCACTTAACATTGACATACGATTTTCATAGCTATATGATCCGCTCTATGGAAGAAGAGTTCCAAAAGATTGTTGGCGTCAGTGGGCCACTTTGGGGTTTTGTAGTTGGTTTCATGCTTTTCAACATAAAAGGATCAAATCTTTATTTCTGGCTAGCGATCATTCCAATCACTCTTGTTCTTTTGGTTGGTGCAAAGTTGCAACATGTCATCGCAACTTTAGCATTGGAGAACGCTAGTATAACAGAATATGCTTCTGGTATAAAGCTGAGACCTCGCGATGAACTTTTTTGGTTCAAGAAACCGGAATTACTCTTATCCCTTATCCACTTCATTCAGTTTCAGAATGCTTTTGAACTGGCTTCTTTCTTCTGGTTTTGGTGGCAATTTGGATACAATTCTTGCTTCCTAAGGAACCATTTACTTGTCTACTTGCGACTTATTCTAGGGTTTTCTGGACAATTTTTATGTAGCTACAGCACACTGCCACTCTATGCACTTGTCACTCAGATGGGAACAAACTACAAGGCAGCATTGTTACCTCAAAGGGTAAGAGAGACAATTAATGGTTGGGGAAAAGCAACAAGACGGAAAAGAAGACATGGTTTATATGGAGATGATTCAACTATTCGAACAGAAACAAGCACAATTGCATCTGTTGATGAATACAATGACCAGGTGCTTGATGTTTCCGAAACCTCTCCAGTTCAAGATAACGAGCTTGAGCTTCAGCTTATTCGCGGAGCTTGTGGAAATTCTAGTAGTGTTGAAACACCGATCTTGCGGCCTTGTGCTTCAATATCTTCAACGACTTTCTCGAGGCTACAGACAGAAACAACAGACTCACTCTCAAGGTCATCCTCATTGCCAATGAGAAGAGAATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

554

Amino Acids

63.92

Weight (kDa)

8.78

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 9 - 469 3.3e-164 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 485
AccBSI CCGCTC 1 cut(s) 822
AccI GTMKAC 1 cut(s) 1206
AccII CGCG 3 cut(s) 615, 1056, 1518
AciI CCGC 4 cut(s) 346, 820, 1518, 1561
AclI AACGTT 2 cut(s) 32, 106
AclWI GGATC 3 cut(s) 591, 811, 919
AcsI RAATTY 1 cut(s) 1531
AcuI CTGAAG 2 cut(s) 694, 1490
AcyI GRCGYC 1 cut(s) 855
AfaI GTAC 2 cut(s) 295, 328
AfiI CCNNNNNNNGG 3 cut(s) 117, 826, 872
AflIII ACRYGT 1 cut(s) 982
AjnI CCWGG 1 cut(s) 1452
AloI GAACNNNNNNTCC 2 cut(s) 821, 853
Alw26I GTCTC 3 cut(s) 262, 1042, 1328
AlwI GGATC 3 cut(s) 591, 811, 919
Ama87I CYCGRG 1 cut(s) 1594
AoxI GGCC 2 cut(s) 863, 1562
ApeKI GCWGC 5 cut(s) 164, 196, 420, 513, 1307
ApoI RAATTY 1 cut(s) 1531
AseI ATTAAT 2 cut(s) 309, 1341
AspS9I GGNCC 1 cut(s) 863
AsuHPI GGTGA 1 cut(s) 709
AsuII TTCGAA 1 cut(s) 1408
AsuNHI GCTAGC 1 cut(s) 931
AvaI CYCGRG 1 cut(s) 1594
AxyI CCTNAGG 1 cut(s) 1187
BbsI GAAGAC 2 cut(s) 573, 1381
BbvI GCAGC 5 cut(s) 151, 183, 432, 500, 1319
BccI CCATC 3 cut(s) 546, 786, 1282
BcgI CGANNNNNNTGC 2 cut(s) 576, 610
BciT130I CCWGG 1 cut(s) 1454
BciVI GTATCC 2 cut(s) 406, 1163
BcoDI GTCTC 3 cut(s) 262, 1042, 1328
BfaI CTAG 5 cut(s) 234, 932, 1014, 1223, 1536
BfmI CTRYAG 3 cut(s) 63, 1252, 1601
BfuI GTATCC 2 cut(s) 406, 1163
BglII AGATCT 1 cut(s) 362
BisI GCNGC 6 cut(s) 165, 197, 421, 514, 1308, 1562
BlsI GCNGC 6 cut(s) 166, 198, 422, 515, 1309, 1563
BmcAI AGTACT 1 cut(s) 328
Bme1390I CCNGG 1 cut(s) 1454
BmeT110I CYCGRG 1 cut(s) 1594
BmgT120I GGNCC 1 cut(s) 863
BmiI GGNNCC 1 cut(s) 1193
BmrFI CCNGG 1 cut(s) 1454
BmsI GCATC 3 cut(s) 183, 478, 1439
BmtI GCTAGC 1 cut(s) 935
BpiI GAAGAC 2 cut(s) 573, 1381
BpmI CTGGAG 1 cut(s) 1464
Bpu14I TTCGAA 1 cut(s) 1408
BpuEI CTTGAG 2 cut(s) 1520, 1612
BsaAI YACGTR 1 cut(s) 417
BsaBI GATNNNNATC 1 cut(s) 208
BsaHI GRCGYC 1 cut(s) 855
BsaI GGTCTC 1 cut(s) 1042
BsaWI WCCGGW 1 cut(s) 1081
BsaXI ACNNNNNCTCC 2 cut(s) 649, 679
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 826, 872
Bse1I ACTGG 4 cut(s) 134, 649, 1140, 1481
Bse21I CCTNAGG 1 cut(s) 1187
Bse3DI GCAATG 1 cut(s) 1640
Bse8I GATNNNNATC 1 cut(s) 208
BseBI CCWGG 1 cut(s) 1454
BseGI GGATG 1 cut(s) 1634
BseJI GATNNNNATC 1 cut(s) 208
BseLI CCNNNNNNNGG 3 cut(s) 117, 826, 872
BseMI GCAATG 1 cut(s) 1640
BseMII CTCAG 5 cut(s) 294, 365, 374, 1037, 1298
BseNI ACTGG 4 cut(s) 134, 649, 1140, 1481
BseRI GAGGAG 2 cut(s) 400, 657
BseXI GCAGC 5 cut(s) 151, 183, 432, 500, 1319
BsgI GTGCAG 1 cut(s) 439
Bsh1236I CGCG 3 cut(s) 615, 1056, 1518
BshFI GGCC 2 cut(s) 865, 1564
BsiHKCI CYCGRG 1 cut(s) 1594
BsiSI CCGG 1 cut(s) 1082
BslFI GGGAC 1 cut(s) 272
BslI CCNNNNNNNGG 3 cut(s) 117, 826, 872
BsmAI GTCTC 3 cut(s) 262, 1042, 1328
BsmBI CGTCTC 1 cut(s) 262
BsmFI GGGAC 1 cut(s) 272
BsmI GAATGC 1 cut(s) 1129
BsnI GGCC 2 cut(s) 865, 1564
Bso31I GGTCTC 1 cut(s) 1042
BsoBI CYCGRG 1 cut(s) 1594
Bsp119I TTCGAA 1 cut(s) 1408
Bsp143I GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
Bsp68I TCGCGA 1 cut(s) 1056
BspACI CCGC 4 cut(s) 346, 820, 1518, 1561
BspANI GGCC 2 cut(s) 865, 1564
BspCNI CTCAG 5 cut(s) 295, 364, 375, 1038, 1297
BspFNI CGCG 3 cut(s) 615, 1056, 1518
BspHI TCATGA 1 cut(s) 771
BspLI GGNNCC 1 cut(s) 1193
BspOI GCTAGC 1 cut(s) 935
BspPI GGATC 3 cut(s) 591, 811, 919
BspQI GCTCTTC 1 cut(s) 180
BspT104I TTCGAA 1 cut(s) 1408
BspTNI GGTCTC 1 cut(s) 1042
BsrBI CCGCTC 1 cut(s) 822
BsrDI GCAATG 1 cut(s) 1640
BsrI ACTGG 4 cut(s) 134, 649, 1140, 1481
BssMI GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
BssNI GRCGYC 1 cut(s) 855
Bst2UI CCWGG 1 cut(s) 1454
Bst4CI ACNGT 4 cut(s) 67, 340, 604, 717
Bst6I CTCTTC 5 cut(s) 180, 265, 374, 828, 1648
BstACI GRCGYC 1 cut(s) 855
BstBAI YACGTR 1 cut(s) 417
BstBI TTCGAA 1 cut(s) 1408
BstC8I GCNNGC 2 cut(s) 613, 933
BstDEI CTNAG 8 cut(s) 122, 144, 303, 351, 383, 1046, 1187, 1284
BstF5I GGATG 1 cut(s) 1634
BstFNI CGCG 3 cut(s) 615, 1056, 1518
BstKTI GATC 7 cut(s) 99, 365, 586, 819, 914, 939, 1557
BstMAI GTCTC 3 cut(s) 262, 1042, 1328
BstMBI GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
BstMWI GCNNNNNNNGC 2 cut(s) 196, 998
BstNI CCWGG 1 cut(s) 1454
BstNSI RCATGY 1 cut(s) 986
BstSCI CCNGG 1 cut(s) 1452
BstSFI CTRYAG 3 cut(s) 63, 1252, 1601
BstUI CGCG 3 cut(s) 615, 1056, 1518
BstV1I GCAGC 5 cut(s) 151, 183, 432, 500, 1319
BstV2I GAAGAC 2 cut(s) 573, 1381
BstX2I RGATCY 1 cut(s) 362
BstYI RGATCY 1 cut(s) 362
Bsu36I CCTNAGG 1 cut(s) 1187
BsuI GTATCC 2 cut(s) 406, 1163
BsuRI GGCC 2 cut(s) 865, 1564
BtgZI GCGATG 3 cut(s) 455, 973, 1071
BtsCI GGATG 1 cut(s) 1634
BtsI GCAGTG 1 cut(s) 1259
BtsIMutI CAGTG 2 cut(s) 865, 1259
BtuMI TCGCGA 1 cut(s) 1056
Cac8I GCNNGC 2 cut(s) 613, 933
CciI TCATGA 1 cut(s) 771
Cfr13I GGNCC 1 cut(s) 863
CseI GACGC 2 cut(s) 244, 844
CsiI ACCWGGT 1 cut(s) 1452
Csp6I GTAC 2 cut(s) 294, 327
CviAII CATG 8 cut(s) 291, 431, 457, 500, 772, 892, 983, 1379
CviQI GTAC 2 cut(s) 294, 327
DdeI CTNAG 8 cut(s) 122, 144, 303, 351, 383, 1046, 1187, 1284
DpnI GATC 7 cut(s) 98, 364, 585, 818, 913, 938, 1556
DpnII GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
Eam1104I CTCTTC 5 cut(s) 180, 265, 374, 828, 1648
EarI CTCTTC 5 cut(s) 180, 265, 374, 828, 1648
Eco31I GGTCTC 1 cut(s) 1042
Eco57I CTGAAG 2 cut(s) 694, 1490
Eco81I CCTNAGG 1 cut(s) 1187
Eco88I CYCGRG 1 cut(s) 1594
EcoRII CCWGG 1 cut(s) 1452
Esp3I CGTCTC 1 cut(s) 262
FaeI CATG 8 cut(s) 294, 434, 460, 503, 775, 895, 986, 1382
FaqI GGGAC 1 cut(s) 272
FatI CATG 8 cut(s) 290, 430, 456, 499, 771, 891, 982, 1378
FauNDI CATATG 3 cut(s) 251, 448, 579
FblI GTMKAC 1 cut(s) 1206
Fnu4HI GCNGC 6 cut(s) 165, 197, 421, 514, 1308, 1562
FokI GGATG 1 cut(s) 1621
Fsp4HI GCNGC 6 cut(s) 165, 197, 421, 514, 1308, 1562
FspBI CTAG 5 cut(s) 234, 932, 1014, 1223, 1536
GluI GCNGC 6 cut(s) 165, 197, 421, 514, 1308, 1562
GsuI CTGGAG 1 cut(s) 1464
HaeIII GGCC 2 cut(s) 865, 1564
HapII CCGG 1 cut(s) 1082
HgaI GACGC 2 cut(s) 244, 844
Hin1I GRCGYC 1 cut(s) 855
Hin1II CATG 8 cut(s) 294, 434, 460, 503, 775, 895, 986, 1382
HincII GTYRAC 1 cut(s) 357
HindII GTYRAC 1 cut(s) 357
HinfI GANTC 6 cut(s) 204, 349, 544, 765, 1397, 1619
HpaI GTTAAC 1 cut(s) 357
HpaII CCGG 1 cut(s) 1082
HphI GGTGA 1 cut(s) 709
Hpy166II GTNNAC 2 cut(s) 357, 1207
Hpy188III TCNNGA 8 cut(s) 538, 676, 772, 1055, 1075, 1233, 1487, 1594
Hpy8I GTNNAC 2 cut(s) 357, 1207
HpyAV CCTTC 3 cut(s) 309, 446, 624
HpyCH4III ACNGT 4 cut(s) 67, 340, 604, 717
HpyCH4IV ACGT 3 cut(s) 32, 106, 416
HpyF10VI GCNNNNNNNGC 2 cut(s) 196, 998
HpyF3I CTNAG 8 cut(s) 122, 144, 303, 351, 383, 1046, 1187, 1284
HpySE526I ACGT 3 cut(s) 32, 106, 416
Hsp92I GRCGYC 1 cut(s) 855
Hsp92II CATG 8 cut(s) 294, 434, 460, 503, 775, 895, 986, 1382
KspAI GTTAAC 1 cut(s) 357
Kzo9I GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
LguI GCTCTTC 1 cut(s) 180
LmnI GCTCC 2 cut(s) 670, 1520
Lsp1109I GCAGC 5 cut(s) 151, 183, 432, 500, 1319
LweI GCATC 3 cut(s) 183, 478, 1439
MabI ACCWGGT 1 cut(s) 1452
MaeI CTAG 5 cut(s) 234, 932, 1014, 1223, 1536
MaeII ACGT 3 cut(s) 32, 106, 416
MaeIII GTNAC 5 cut(s) 125, 493, 502, 1279, 1314
MalI GATC 7 cut(s) 98, 364, 585, 818, 913, 938, 1556
MbiI CCGCTC 1 cut(s) 822
MboI GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
MfeI CAATTG 2 cut(s) 464, 1425
MflI RGATCY 1 cut(s) 362
MluCI AATT 8 cut(s) 464, 1085, 1163, 1174, 1238, 1338, 1425, 1531
MlyI GAGTC 2 cut(s) 343, 1613
MseI TTAA 7 cut(s) 41, 309, 356, 599, 785, 1341, 1663
MslI CAYNNNNRTG 1 cut(s) 1286
MspA1I CMGCKG 1 cut(s) 513
MspI CCGG 1 cut(s) 1082
MspR9I CCNGG 1 cut(s) 1454
MunI CAATTG 2 cut(s) 464, 1425
Mva1269I GAATGC 1 cut(s) 1129
MvaI CCWGG 1 cut(s) 1454
MvnI CGCG 3 cut(s) 615, 1056, 1518
MwoI GCNNNNNNNGC 2 cut(s) 196, 998
NdeI CATATG 3 cut(s) 251, 448, 579
NdeII GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
NheI GCTAGC 1 cut(s) 931
NlaIII CATG 8 cut(s) 294, 434, 460, 503, 775, 895, 986, 1382
NlaIV GGNNCC 1 cut(s) 1193
NmuCI GTSAC 2 cut(s) 493, 1279
NruI TCGCGA 1 cut(s) 1056
NspI RCATGY 1 cut(s) 986
NspV TTCGAA 1 cut(s) 1408
PaeR7I CTCGAG 1 cut(s) 1594
PagI TCATGA 1 cut(s) 771
PciI ACATGT 1 cut(s) 982
PciSI GCTCTTC 1 cut(s) 180
PcsI WCGNNNNNNNCGW 1 cut(s) 1592
PctI GAATGC 1 cut(s) 1129
PfeI GAWTC 4 cut(s) 204, 544, 765, 1397
PkrI GCNGC 6 cut(s) 166, 198, 422, 515, 1309, 1563
PleI GAGTC 2 cut(s) 343, 1613
PpsI GAGTC 2 cut(s) 343, 1613
Ppu21I YACGTR 1 cut(s) 417
PscI ACATGT 1 cut(s) 982
PshBI ATTAAT 2 cut(s) 309, 1341
PsiI TTATAA 1 cut(s) 485
Psp1406I AACGTT 2 cut(s) 32, 106
Psp6I CCWGG 1 cut(s) 1452
PspGI CCWGG 1 cut(s) 1452
PspN4I GGNNCC 1 cut(s) 1193
PspPI GGNCC 1 cut(s) 863
PsuI RGATCY 1 cut(s) 362
PvuII CAGCTG 1 cut(s) 513
RruI TCGCGA 1 cut(s) 1056
RsaI GTAC 2 cut(s) 295, 328
RsaNI GTAC 2 cut(s) 294, 327
RseI CAYNNNNRTG 1 cut(s) 1286
SapI GCTCTTC 1 cut(s) 180
SaqAI TTAA 7 cut(s) 41, 309, 356, 599, 785, 1341, 1663
SatI GCNGC 6 cut(s) 165, 197, 421, 514, 1308, 1562
Sau3AI GATC 7 cut(s) 96, 362, 583, 816, 911, 936, 1554
Sau96I GGNCC 1 cut(s) 863
ScaI AGTACT 1 cut(s) 328
SchI GAGTC 2 cut(s) 343, 1613
ScrFI CCNGG 1 cut(s) 1454
SexAI ACCWGGT 1 cut(s) 1452
SfaNI GCATC 3 cut(s) 183, 478, 1439
SfcI CTRYAG 3 cut(s) 63, 1252, 1601
Sfr274I CTCGAG 1 cut(s) 1594
SfuI TTCGAA 1 cut(s) 1408
SlaI CTCGAG 1 cut(s) 1594
SmiMI CAYNNNNRTG 1 cut(s) 1286
SmlI CTYRAG 3 cut(s) 1499, 1594, 1627
SmoI CTYRAG 3 cut(s) 1499, 1594, 1627
Sse9I AATT 8 cut(s) 464, 1085, 1163, 1174, 1238, 1338, 1425, 1531
SsiI CCGC 4 cut(s) 346, 820, 1518, 1561
SspMI CTAG 5 cut(s) 234, 932, 1014, 1223, 1536
StyD4I CCNGG 1 cut(s) 1452
TaaI ACNGT 4 cut(s) 67, 340, 604, 717
TaiI ACGT 3 cut(s) 35, 109, 419
TaqI TCGA 3 cut(s) 586, 1408, 1595
TasI AATT 8 cut(s) 464, 1085, 1163, 1174, 1238, 1338, 1425, 1531
TatI WGTACW 1 cut(s) 326
TauI GCSGC 1 cut(s) 1564
TfiI GAWTC 4 cut(s) 204, 544, 765, 1397
Tru1I TTAA 7 cut(s) 41, 309, 356, 599, 785, 1341, 1663
Tru9I TTAA 7 cut(s) 41, 309, 356, 599, 785, 1341, 1663
TscAI CASTG 2 cut(s) 865, 1266
TseFI GTSAC 2 cut(s) 493, 1279
TseI GCWGC 5 cut(s) 164, 196, 420, 513, 1307
Tsp45I GTSAC 2 cut(s) 493, 1279
TspGWI ACGGA 1 cut(s) 1381
TspRI CASTG 2 cut(s) 865, 1266
VspI ATTAAT 2 cut(s) 309, 1341
XapI RAATTY 1 cut(s) 1531
XceI RCATGY 1 cut(s) 986
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XhoI CTCGAG 1 cut(s) 1594
XmiI GTMKAC 1 cut(s) 1206
XspI CTAG 5 cut(s) 234, 932, 1014, 1223, 1536
ZrmI AGTACT 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.