Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010793

Physical Location & Seq

Genomic Coordinates Reverse (-)

9551451 .. 9554422

Gene Structure 2972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G27500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGAAGGAGGGTCTGTTAATGAATCGCATTCTAATGCGGACCAAATGTTTGACACAACTATAGAAGAGTTATGTAAGAATCTCTGCGAATTGCAGAGTTCTAATCAATCTCCTTCAAGGCAGAGTTTTGGATCATATGGTGATGAGTCAAAGATTGATTCTGATCTACAACATCTTGCTTTGGGAGAGATGCGAGATATTGATATCTTGGAAGATGAAGGAGATGAGGACGAAGTGGCAAAGCCAGAAGAGTTTGATGTCAAGTCAAATTCTTCAAACTTGGATTTGGAAGTCATGCCCAGGGATATGGAGAAACAAACTGGTAAGAAGAATGTGACTAAATCGAACGTTGGAGTCGGTGGAATGAGGAAGAAGAAAGTCGGAGGTACCAAGTTACAAAATGGAAATGAAGAACCATCATCTGAAAATGTAGAGCTGGCACGTTTTTTACTGAACCAAGCGAGAAACTTGGTTAGTTCTGGTGACAGTACACACAAAGCTCTCGAGTTAACTCATCGAGCAGCTAAGTTGTTTGAGGCTTCTGCAGAGAATGGGAAACCATGTTTGGAATGGATCATGTGTTTGCATGTTACAGCAGCAGTCCATTGTAAGTTAAAAGAGTACAATGAGGCAATTCCGGTTCTACAGCGCTCTGTTGAGATTCCTGTTGTTGAAGAAGGTGAAGAGCATGCTCTAGCTAAATTTGCTGGTCTGATGCAGTTAGGTGACACTTACGCTATGGTGGGGCAGCTAGAGAGCTCGATATCGTGTTATACCGAGGGATTGAATATCCAGAAGAAGGTTTTGGGAGAAAATGACCCAAGAGTTGGTGAAACATGCAGATACCTAGCAGAAGCTCTTGTACAAGCATTACGGTTTGATGAGGCTCAACAGGTCTGCGAAACGGCTCTTTCTATACATAGAGAAAGCGGTTTACCAGGTTCAATCGCAGAGGCCGCGGATAGAAGACTCATGGGGCTTATATGTGAGACTAAGGGAGATCATGAGAATGCCCTTGAGCATTTGGTATTAGCCAGTATGGCCATGGCAGCAAATGGACAAGAGTCTGAGGTTGCTTTTGTTGATACTAGCATTGGTGACTCGTACTTGTCTTTGTCTCGGTTCGATGAAGCGATTTGTGCATACCAGAAATCTCTCACAGCACTGAAGACAGCAAAGGGAGAGAACCATCCAGCTGTTGGTTCAGTTTATATCCGTTTAGCTGATCTCTATAATCGGACAGGAAAAGTGCGTGAAGCAAAGTCTTATTGTGAAAATGCTCTTCGGATATACGAGTCTCATAACCTAGAGATTTCTCCTGAAGAGATTGCAAGTGGTCTTACAGATATCTCCGTGATATGCGAGTCTATGAACGAGGTGGAACAAGCTATTACCTTGCTACAAAAGGCGCTGAAGATATACGCGGATTCTCCTGGCCAGAAAATCATGATTGCAGGGATTGAAGCTCAAATGGGAGTGTTGTACTATATGATGGGGAAATACATGGAGTCGTACAACACATTTAAGAGCGCTATCTCAAAACTACGGGCGACTGGAAAGAAACAATCAACGTTTTTCGGGATTGCACTTAACCAAATGGGTTTAGCATGCATTCAGCTCGATGCAATAGAAGAGGCTGTTGAGTTGTTTGAAGAAGCCAAGTGTATTTTAGAACAAGAGTGTGGTCCTTATCACCCGGAAACACTTGGATTGTACAGTAACCTTGCAGGAGCTTATGATGCAATTGGCAGGTTGGATGATGCGATTAAGCTGCTAGGACATGTGGTTGGGGTTCGGGAGGAAAAGCTCGGGACAGCGAATCCTGTAACGGAAGACGAGAAGAGGAGGCTGGCCCAACTCTTGAAAGAAGCTGGTAACGTTACAGGAAGGAAAGCTAAATCCCTCAAGACTCTAATTGATTCCGATCTCACTTCTTCTTCAGCTCTTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0031347 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044464 GO:0044706 GO:0048468 GO:0048583 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0051704 GO:0060560 GO:0065007 GO:0071840 GO:0071944 GO:0080134

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

650

Amino Acids

71.18

Weight (kDa)

4.93

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	199 - 267	6e-06	Tetratricopeptide repeat
TPR_12	PF13424	238 - 298	3e-06	Tetratricopeptide repeat
TPR_12	PF13424	283 - 342	6.7e-07	Tetratricopeptide repeat
TPR_MalT	PF17874	324 - 489	1.8e-09	MalT-like TPR region
TPR_NPHP3	PF24885	352 - 473	3.2e-07	Nephrocystin-3 TPR domain
TPR_12	PF13424	363 - 433	5.5e-10	Tetratricopeptide repeat
TPR_12	PF13424	528 - 600	3.5e-10	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27500 AT1G27500
fragaria_vesca	FvH4_5g05250 FvH4_5g05250 FvH4_5g05250
malus_domestica	MD06G1174800.v1.1 MD14G1181500.v1.1
prunus_persica	Prupe.5G174500_v2.0.a1 Prupe.5G174500_v2.0.a1
pyrus_communis	pycom06g15580 pycom14g15090
rosa_chinensis	RchiOBHm_Chr7g0193621
rosa_laevigata	RLG00000004255
rosa_multiflora	Rmu_sc0042944.1_g000001
rosa_roxburghii	Rroxscaffold_3G00261950
rosa_rugosa	Rorug07G0011200
rosa_samantha	Rh7BG137900 Rh7CG141500 Rh7DG139100
rosa_wichuraiana	Rw7G011730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1740
Acc65I	GGTACC	1 cut(s)	386
AccB1I	GGYRCC	1 cut(s)	386
AccB7I	CCANNNNNTGG	2 cut(s)	827, 1199
AccII	CGCG	2 cut(s)	959, 1424
AciI	CCGC	5 cut(s)	38, 930, 957, 959, 1424
AclI	AACGTT	3 cut(s)	348, 1571, 1878
AclWI	GGATC	2 cut(s)	139, 581
AcoI	YGGCCR	2 cut(s)	1041, 1435
AcsI	RAATTY	2 cut(s)	268, 701
AcuI	CTGAAG	4 cut(s)	1187, 1341, 1433, 1923
AfaI	GTAC	8 cut(s)	388, 490, 623, 864, 1106, 1484, 1514, 1715
AfeI	AGCGCT	2 cut(s)	650, 1531
AfiI	CCNNNNNNNGG	3 cut(s)	799, 827, 1199
AflIII	ACRYGT	1 cut(s)	1780
AgsI	TTSAA	8 cut(s)	117, 276, 674, 787, 945, 1463, 1652, 1864
AjnI	CCWGG	3 cut(s)	299, 937, 1432
AjuI	GAANNNNNNNTTGG	4 cut(s)	548, 580, 788, 820
Alw21I	GWGCWC	1 cut(s)	761
Alw26I	GTCTC	3 cut(s)	983, 1122, 1302
AlwI	GGATC	2 cut(s)	139, 581
Ama87I	CYCGRG	2 cut(s)	503, 1808
Aor51HI	AGCGCT	2 cut(s)	650, 1531
AoxI	GGCC	4 cut(s)	954, 1041, 1435, 1851
ApeKI	GCWGC	5 cut(s)	521, 596, 748, 1049, 1771
ApoI	RAATTY	2 cut(s)	268, 701
ArsI	GACNNNNNNTTYG	2 cut(s)	32, 64
Asp718I	GGTACC	1 cut(s)	386
AspLEI	GCGC	3 cut(s)	651, 1411, 1532
AspS9I	GGNCC	3 cut(s)	40, 1685, 1852
AsuC2I	CCSGG	1 cut(s)	1697
AsuHPI	GGTGA	7 cut(s)	152, 494, 692, 737, 842, 1109, 1685
AvaI	CYCGRG	2 cut(s)	503, 1808
AvaII	GGWCC	2 cut(s)	40, 1685
BalI	TGGCCA	2 cut(s)	1043, 1437
BanI	GGYRCC	1 cut(s)	386
BanII	GRGCYC	1 cut(s)	761
BarI	GAAGNNNNNNTAC	2 cut(s)	846, 878
BbsI	GAAGAC	3 cut(s)	973, 1175, 1839
Bbv12I	GWGCWC	1 cut(s)	761
BbvI	GCAGC	5 cut(s)	533, 608, 760, 1061, 1758
BccI	CCATC	3 cut(s)	424, 1197, 1486
BceAI	ACGGC	1 cut(s)	921
BcgI	CGANNNNNNTGC	4 cut(s)	1600, 1634, 1753, 1787
BciT130I	CCWGG	3 cut(s)	301, 939, 1434
BcnI	CCSGG	1 cut(s)	1697
BcoDI	GTCTC	3 cut(s)	983, 1122, 1302
BfaI	CTAG	6 cut(s)	695, 752, 848, 1089, 1307, 1775
BfmI	CTRYAG	3 cut(s)	60, 543, 644
BfoI	RGCGCY	3 cut(s)	652, 1412, 1533
BfuAI	ACCTGC	1 cut(s)	1740
BglI	GCCNNNNNGGC	1 cut(s)	1040
BisI	GCNGC	6 cut(s)	522, 597, 749, 957, 1050, 1772
BlsI	GCNGC	6 cut(s)	523, 598, 750, 958, 1051, 1773
Bme1390I	CCNGG	4 cut(s)	301, 939, 1434, 1697
Bme18I	GGWCC	2 cut(s)	40, 1685
BmeT110I	CYCGRG	2 cut(s)	503, 1808
BmgT120I	GGNCC	3 cut(s)	40, 1685, 1852
BmiI	GGNNCC	1 cut(s)	388
BmrFI	CCNGG	4 cut(s)	301, 939, 1434, 1697
BmsI	GCATC	5 cut(s)	180, 705, 1612, 1729, 1750
BoxI	GACNNNNGTC	1 cut(s)	1063
BpiI	GAAGAC	3 cut(s)	973, 1175, 1839
BpuEI	CTTGAG	2 cut(s)	1037, 1889
BpuMI	CCSGG	1 cut(s)	1697
BsaBI	GATNNNNATC	2 cut(s)	162, 1923
BsaJI	CCNNGG	5 cut(s)	299, 300, 777, 957, 1044
BsaWI	WCCGGW	1 cut(s)	637
BsaXI	ACNNNNNCTCC	1 cut(s)	30
Bsc4I	CCNNNNNNNGG	3 cut(s)	799, 827, 1199
Bse1I	ACTGG	3 cut(s)	325, 1035, 1558
Bse8I	GATNNNNATC	2 cut(s)	162, 1923
BseBI	CCWGG	3 cut(s)	301, 939, 1434
BseDI	CCNNGG	5 cut(s)	299, 300, 777, 957, 1044
BseGI	GGATG	2 cut(s)	1189, 1762
BseJI	GATNNNNATC	2 cut(s)	162, 1923
BseLI	CCNNNNNNNGG	3 cut(s)	799, 827, 1199
BseMII	CTCAG	1 cut(s)	1059
BseNI	ACTGG	3 cut(s)	325, 1035, 1558
BseRI	GAGGAG	1 cut(s)	1858
BseXI	GCAGC	5 cut(s)	533, 608, 760, 1061, 1758
Bsh1236I	CGCG	2 cut(s)	959, 1424
BshFI	GGCC	4 cut(s)	956, 1043, 1437, 1853
BshNI	GGYRCC	1 cut(s)	386
BsiHKAI	GWGCWC	1 cut(s)	761
BsiHKCI	CYCGRG	2 cut(s)	503, 1808
BsiSI	CCGG	2 cut(s)	638, 1697
BslFI	GGGAC	1 cut(s)	1825
BslI	CCNNNNNNNGG	3 cut(s)	799, 827, 1199
BsmAI	GTCTC	3 cut(s)	983, 1122, 1302
BsmFI	GGGAC	1 cut(s)	1825
BsmI	GAATGC	3 cut(s)	28, 1015, 1611
BsnI	GGCC	4 cut(s)	956, 1043, 1437, 1853
BsoBI	CYCGRG	2 cut(s)	503, 1808
Bsp1286I	GDGCHC	1 cut(s)	761
Bsp1407I	TGTACA	2 cut(s)	862, 1713
Bsp143I	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
Bsp19I	CCATGG	1 cut(s)	1044
BspACI	CCGC	5 cut(s)	38, 930, 957, 959, 1424
BspANI	GGCC	4 cut(s)	956, 1043, 1437, 1853
BspCNI	CTCAG	1 cut(s)	1060
BspFNI	CGCG	2 cut(s)	959, 1424
BspHI	TCATGA	2 cut(s)	1003, 1446
BspLI	GGNNCC	1 cut(s)	388
BspMAI	CTGCAG	1 cut(s)	547
BspMI	ACCTGC	1 cut(s)	1740
BspPI	GGATC	2 cut(s)	139, 581
BspQI	GCTCTTC	3 cut(s)	678, 1287, 1950
BspT107I	GGYRCC	1 cut(s)	386
BsrGI	TGTACA	2 cut(s)	862, 1713
BsrI	ACTGG	3 cut(s)	325, 1035, 1558
BssECI	CCNNGG	5 cut(s)	299, 300, 777, 957, 1044
BssMI	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
BssT1I	CCWWGG	1 cut(s)	1044
Bst2UI	CCWGG	3 cut(s)	301, 939, 1434
Bst4CI	ACNGT	3 cut(s)	488, 876, 1718
Bst6I	CTCTTC	8 cut(s)	60, 243, 678, 1287, 1317, 1626, 1835, 1950
BstAUI	TGTACA	2 cut(s)	862, 1713
BstC8I	GCNNGC	4 cut(s)	438, 690, 1609, 1851
BstDEI	CTNAG	3 cut(s)	525, 993, 1068
BstDSI	CCRYGG	2 cut(s)	957, 1044
BstF5I	GGATG	2 cut(s)	1189, 1762
BstFNI	CGCG	2 cut(s)	959, 1424
BstH2I	RGCGCY	3 cut(s)	652, 1412, 1533
BstHHI	GCGC	3 cut(s)	651, 1411, 1532
BstKTI	GATC	6 cut(s)	134, 166, 576, 1003, 1228, 1927
BstMAI	GTCTC	3 cut(s)	983, 1122, 1302
BstMBI	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
BstMWI	GCNNNNNNNGC	6 cut(s)	704, 956, 1040, 1049, 1139, 1739
BstNI	CCWGG	3 cut(s)	301, 939, 1434
BstNSI	RCATGY	5 cut(s)	590, 692, 840, 1611, 1784
BstPAI	GACNNNNGTC	1 cut(s)	1063
BstSCI	CCNGG	4 cut(s)	299, 937, 1432, 1695
BstSFI	CTRYAG	3 cut(s)	60, 543, 644
BstUI	CGCG	2 cut(s)	959, 1424
BstV1I	GCAGC	5 cut(s)	533, 608, 760, 1061, 1758
BstV2I	GAAGAC	3 cut(s)	973, 1175, 1839
BstXI	CCANNNNNNTGG	1 cut(s)	307
BsuRI	GGCC	4 cut(s)	956, 1043, 1437, 1853
BtgI	CCRYGG	2 cut(s)	957, 1044
BtsCI	GGATG	2 cut(s)	1189, 1762
BtsIMutI	CAGTG	1 cut(s)	1163
BveI	ACCTGC	1 cut(s)	1740
Cac8I	GCNNGC	4 cut(s)	438, 690, 1609, 1851
CciI	TCATGA	2 cut(s)	1003, 1446
CfoI	GCGC	3 cut(s)	651, 1411, 1532
Cfr13I	GGNCC	3 cut(s)	40, 1685, 1852
Cfr42I	CCGCGG	1 cut(s)	960
CsiI	ACCWGGT	1 cut(s)	937
Csp6I	GTAC	8 cut(s)	387, 489, 622, 863, 1105, 1483, 1513, 1714
CviQI	GTAC	8 cut(s)	387, 489, 622, 863, 1105, 1483, 1513, 1714
DdeI	CTNAG	3 cut(s)	525, 993, 1068
DpnI	GATC	6 cut(s)	133, 165, 575, 1002, 1227, 1926
DpnII	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
EaeI	YGGCCR	2 cut(s)	1041, 1435
Eam1104I	CTCTTC	8 cut(s)	60, 243, 678, 1287, 1317, 1626, 1835, 1950
EarI	CTCTTC	8 cut(s)	60, 243, 678, 1287, 1317, 1626, 1835, 1950
Ecl136II	GAGCTC	1 cut(s)	759
Eco130I	CCWWGG	1 cut(s)	1044
Eco24I	GRGCYC	1 cut(s)	761
Eco32I	GATATC	3 cut(s)	205, 765, 1348
Eco47I	GGWCC	2 cut(s)	40, 1685
Eco47III	AGCGCT	2 cut(s)	650, 1531
Eco53kI	GAGCTC	1 cut(s)	759
Eco57I	CTGAAG	4 cut(s)	1187, 1341, 1433, 1923
Eco88I	CYCGRG	2 cut(s)	503, 1808
EcoICRI	GAGCTC	1 cut(s)	759
EcoRII	CCWGG	3 cut(s)	299, 937, 1432
EcoRV	GATATC	3 cut(s)	205, 765, 1348
EcoT14I	CCWWGG	1 cut(s)	1044
EcoT22I	ATGCAT	1 cut(s)	1613
EcoT38I	GRGCYC	1 cut(s)	761
ErhI	CCWWGG	1 cut(s)	1044
FaqI	GGGAC	1 cut(s)	1825
FauNDI	CATATG	1 cut(s)	136
Fnu4HI	GCNGC	6 cut(s)	522, 597, 749, 957, 1050, 1772
FokI	GGATG	2 cut(s)	1176, 1769
FriOI	GRGCYC	1 cut(s)	761
Fsp4HI	GCNGC	6 cut(s)	522, 597, 749, 957, 1050, 1772
FspBI	CTAG	6 cut(s)	695, 752, 848, 1089, 1307, 1775
GlaI	GCGC	3 cut(s)	650, 1410, 1531
GluI	GCNGC	6 cut(s)	522, 597, 749, 957, 1050, 1772
HaeII	RGCGCY	3 cut(s)	652, 1412, 1533
HaeIII	GGCC	4 cut(s)	956, 1043, 1437, 1853
HapII	CCGG	2 cut(s)	638, 1697
HhaI	GCGC	3 cut(s)	651, 1411, 1532
Hin6I	GCGC	3 cut(s)	649, 1409, 1530
HinP1I	GCGC	3 cut(s)	649, 1409, 1530
HincII	GTYRAC	1 cut(s)	510
HindII	GTYRAC	1 cut(s)	510
HpaI	GTTAAC	1 cut(s)	510
HpaII	CCGG	2 cut(s)	638, 1697
HphI	GGTGA	7 cut(s)	152, 494, 692, 737, 842, 1109, 1685
Hpy166II	GTNNAC	3 cut(s)	491, 510, 935
Hpy188I	TCNGA	8 cut(s)	163, 383, 424, 714, 1069, 1239, 1287, 1924
Hpy8I	GTNNAC	3 cut(s)	491, 510, 935
HpyAV	CCTTC	5 cut(s)	123, 212, 671, 793, 1881
HpyCH4III	ACNGT	3 cut(s)	488, 876, 1718
HpyCH4IV	ACGT	4 cut(s)	348, 442, 1571, 1878
HpyF10VI	GCNNNNNNNGC	6 cut(s)	704, 956, 1040, 1049, 1139, 1739
HpyF3I	CTNAG	3 cut(s)	525, 993, 1068
HpySE526I	ACGT	4 cut(s)	348, 442, 1571, 1878
HspAI	GCGC	3 cut(s)	649, 1409, 1530
KpnI	GGTACC	1 cut(s)	390
KspAI	GTTAAC	1 cut(s)	510
KspI	CCGCGG	1 cut(s)	960
Kzo9I	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
LguI	GCTCTTC	3 cut(s)	678, 1287, 1950
LmnI	GCTCC	1 cut(s)	1730
Lsp1109I	GCAGC	5 cut(s)	533, 608, 760, 1061, 1758
LweI	GCATC	5 cut(s)	180, 705, 1612, 1729, 1750
MabI	ACCWGGT	1 cut(s)	937
MaeI	CTAG	6 cut(s)	695, 752, 848, 1089, 1307, 1775
MaeII	ACGT	4 cut(s)	348, 442, 1571, 1878
MalI	GATC	6 cut(s)	133, 165, 575, 1002, 1227, 1926
MboI	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
MfeI	CAATTG	1 cut(s)	1743
MhlI	GDGCHC	1 cut(s)	761
MlsI	TGGCCA	2 cut(s)	1043, 1437
MluCI	AATT	6 cut(s)	89, 268, 633, 701, 1743, 1914
MluNI	TGGCCA	2 cut(s)	1043, 1437
MlyI	GAGTC	9 cut(s)	155, 363, 963, 1073, 1094, 1304, 1373, 1517, 1903
MmeI	TCCRAC	3 cut(s)	331, 361, 1734
Mox20I	TGGCCA	2 cut(s)	1043, 1437
Mph1103I	ATGCAT	1 cut(s)	1613
MscI	TGGCCA	2 cut(s)	1043, 1437
MseI	TTAA	7 cut(s)	18, 509, 614, 1524, 1590, 1767, 1951
MslI	CAYNNNNRTG	2 cut(s)	33, 1008
Msp20I	TGGCCA	2 cut(s)	1043, 1437
MspA1I	CMGCKG	2 cut(s)	959, 1196
MspI	CCGG	2 cut(s)	638, 1697
MspR9I	CCNGG	4 cut(s)	301, 939, 1434, 1697
MunI	CAATTG	1 cut(s)	1743
Mva1269I	GAATGC	3 cut(s)	28, 1015, 1611
MvaI	CCWGG	3 cut(s)	301, 939, 1434
MvnI	CGCG	2 cut(s)	959, 1424
MwoI	GCNNNNNNNGC	6 cut(s)	704, 956, 1040, 1049, 1139, 1739
NciI	CCSGG	1 cut(s)	1697
NcoI	CCATGG	1 cut(s)	1044
NdeI	CATATG	1 cut(s)	136
NdeII	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
NlaIV	GGNNCC	1 cut(s)	388
NmuCI	GTSAC	4 cut(s)	334, 482, 725, 1097
NsiI	ATGCAT	1 cut(s)	1613
NspI	RCATGY	5 cut(s)	590, 692, 840, 1611, 1784
PaeI	GCATGC	2 cut(s)	692, 1611
PaeR7I	CTCGAG	1 cut(s)	503
PagI	TCATGA	2 cut(s)	1003, 1446
PasI	CCCWGGG	1 cut(s)	300
PciI	ACATGT	1 cut(s)	1780
PciSI	GCTCTTC	3 cut(s)	678, 1287, 1950
PctI	GAATGC	3 cut(s)	28, 1015, 1611
PfeI	GAWTC	7 cut(s)	23, 79, 158, 661, 1427, 1819, 1919
PflMI	CCANNNNNTGG	2 cut(s)	827, 1199
PkrI	GCNGC	6 cut(s)	523, 598, 750, 958, 1051, 1773
PleI	GAGTC	9 cut(s)	154, 362, 963, 1072, 1094, 1303, 1372, 1516, 1903
PpsI	GAGTC	9 cut(s)	154, 362, 963, 1072, 1094, 1303, 1372, 1516, 1903
PscI	ACATGT	1 cut(s)	1780
PshAI	GACNNNNGTC	1 cut(s)	1063
Psp124BI	GAGCTC	1 cut(s)	761
Psp1406I	AACGTT	3 cut(s)	348, 1571, 1878
Psp6I	CCWGG	3 cut(s)	299, 937, 1432
PspGI	CCWGG	3 cut(s)	299, 937, 1432
PspN4I	GGNNCC	1 cut(s)	388
PspPI	GGNCC	3 cut(s)	40, 1685, 1852
PstI	CTGCAG	1 cut(s)	547
PvuII	CAGCTG	1 cut(s)	1196
RsaI	GTAC	8 cut(s)	388, 490, 623, 864, 1106, 1484, 1514, 1715
RsaNI	GTAC	8 cut(s)	387, 489, 622, 863, 1105, 1483, 1513, 1714
RseI	CAYNNNNRTG	2 cut(s)	33, 1008
SacI	GAGCTC	1 cut(s)	761
SacII	CCGCGG	1 cut(s)	960
SapI	GCTCTTC	3 cut(s)	678, 1287, 1950
SaqAI	TTAA	7 cut(s)	18, 509, 614, 1524, 1590, 1767, 1951
SatI	GCNGC	6 cut(s)	522, 597, 749, 957, 1050, 1772
Sau3AI	GATC	6 cut(s)	131, 163, 573, 1000, 1225, 1924
Sau96I	GGNCC	3 cut(s)	40, 1685, 1852
SchI	GAGTC	9 cut(s)	155, 363, 963, 1073, 1094, 1304, 1373, 1517, 1903
ScrFI	CCNGG	4 cut(s)	301, 939, 1434, 1697
SduI	GDGCHC	1 cut(s)	761
SexAI	ACCWGGT	1 cut(s)	937
SfaNI	GCATC	5 cut(s)	180, 705, 1612, 1729, 1750
SfcI	CTRYAG	3 cut(s)	60, 543, 644
Sfr274I	CTCGAG	1 cut(s)	503
Sfr303I	CCGCGG	1 cut(s)	960
SgrBI	CCGCGG	1 cut(s)	960
SinI	GGWCC	2 cut(s)	40, 1685
SlaI	CTCGAG	1 cut(s)	503
SmiMI	CAYNNNNRTG	2 cut(s)	33, 1008
SmlI	CTYRAG	3 cut(s)	503, 1016, 1904
SmoI	CTYRAG	3 cut(s)	503, 1016, 1904
SphI	GCATGC	2 cut(s)	692, 1611
Sse9I	AATT	6 cut(s)	89, 268, 633, 701, 1743, 1914
SsiI	CCGC	5 cut(s)	38, 930, 957, 959, 1424
SspMI	CTAG	6 cut(s)	695, 752, 848, 1089, 1307, 1775
SstI	GAGCTC	1 cut(s)	761
StyD4I	CCNGG	4 cut(s)	299, 937, 1432, 1695
StyI	CCWWGG	1 cut(s)	1044
TaaI	ACNGT	3 cut(s)	488, 876, 1718
TaiI	ACGT	4 cut(s)	351, 445, 1574, 1881
TaqI	TCGA	6 cut(s)	344, 504, 517, 761, 1125, 1620
TasI	AATT	6 cut(s)	89, 268, 633, 701, 1743, 1914
TatI	WGTACW	5 cut(s)	488, 621, 862, 1482, 1713
TauI	GCSGC	1 cut(s)	959
TfiI	GAWTC	7 cut(s)	23, 79, 158, 661, 1427, 1819, 1919
Tru1I	TTAA	7 cut(s)	18, 509, 614, 1524, 1590, 1767, 1951
Tru9I	TTAA	7 cut(s)	18, 509, 614, 1524, 1590, 1767, 1951
TscAI	CASTG	1 cut(s)	1170
TseFI	GTSAC	4 cut(s)	334, 482, 725, 1097
TseI	GCWGC	5 cut(s)	521, 596, 748, 1049, 1771
Tsp45I	GTSAC	4 cut(s)	334, 482, 725, 1097
TspDTI	ATGAA	5 cut(s)	36, 231, 423, 1143, 1385
TspGWI	ACGGA	3 cut(s)	1205, 1342, 1844
TspRI	CASTG	1 cut(s)	1170
Van91I	CCANNNNNTGG	2 cut(s)	827, 1199
VpaK11BI	GGWCC	2 cut(s)	40, 1685
XapI	RAATTY	2 cut(s)	268, 701
XceI	RCATGY	5 cut(s)	590, 692, 840, 1611, 1784
XcmI	CCANNNNNNNNNTGG	3 cut(s)	567, 1042, 1196
XhoI	CTCGAG	1 cut(s)	503
XspI	CTAG	6 cut(s)	695, 752, 848, 1089, 1307, 1775
Zsp2I	ATGCAT	1 cut(s)	1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.