Rmu_sc0042944.1_g000001

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0042944.1
OG0010793
Physical Location & Seq
Forward (+)
22 .. 2570
2549 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0042944.1_g000001.1.cds

Sequence Viewer

Length: 2079 bp
atgcgaaatgatcatccggttgagggggcagttgacacctcaattgagcagctttatgagaatgtgtgtgacatgcagagctctgatcactcaccttcaaggcgtagttttcgatcagatggggaggagtctaggattgattccgagttgcgccatcttgttggaggagagatgagggaggtggagataatggaagaggaggtgcattcaaagccagtggatgattctcgtagtgagtcaagttccaagaaggaaggttcgtccattggaagaaagtcaggaaagattgataagcctcaatctccaagtacaaaatccacttctccacgcaactcaaagaaaagtgctcgcatgcaggtcgactccgagacttcatcaaaatcagtttccaagggaaaaagtcctgacaaacctcccctgcgtaagcatagtgataagactctaccaaaacctgtgggagcaactcctgttaagaaaaacaggaaatcaccttctggaggctccaagttgcagactggaaccgaggattcagctgaatcaggacttaattcggacctggggccatttttgttaaagcaagcaagggatttgatttcttcaggggataatccccagaaagctcttgagttagcccttcgagctacaaaatcgtttgaactatgtgcaaatgggaaaccctgcttagagctagtaatgtgtttgcatgttacatcggcaatttactgtagcttaggccagtacagtgaggcaattccggttcttgagcgctcaattgagatttcacccattgaggaaggccaagatcatgcccttgctaaatttgctggtcacatgcagttgggtgatacttatgctatgctgggccaactggaaaattcacttgcgcattacgcaactggattggaaattcagaaacaaattttgggagaaacggatccaagagttggtgaaacttgtagatatctggctgaagctcatgttcaagcattacaatttgaggaggctcaaaggctttgccagatagctcttgacactcacaaagagaatggttccccagcttctatggaagaggcagcagataggagactcatgggtcttatatgtgaaacaaagggagatcatgaagcagctcttgagcatcttgttttagccagcatggctatggtggcaaatggccaggaagtggaggtagcttctgttgacagcagcattggagacacatacttatccttgtctcggtatgatgaggctgtttttgcttatcagaaggcactgaatgtgttcaagaccactaaaggagagaatcatccatctgttggttcagttttcatccgtctggcagatttgtataacaggacagggaaagttaaggaatcagtatcatactgtgagaatgctcttcgaatttatgaaaaacccatgcccggagtccctcctgaggaaatggcaagtggtctcacagatattgcagctatctatgaatcaatgaatgagctcgagcaggcagtcaagttgttacagaaggcgttaaaaatatacaatgatgcccctggtcagcaaagcacagtagcagggatagaagcccaaatgggggtcatgaactacatgttggggaattattctgaatcttatgagtccttcaagaatgccatcacaaagctccgcgctactggagaaaagaaatctgccttctttgggattgttctgaaccaaatggggcttgcttgtgtacaacgttatgatataaatgaagctcaagaattctttgaagaagccagaactgttttggagcaagagtgtgggccatatcaccctgatacacttggcgtatatagcaatcttgcaggcacttatgatgcagttggaaggttggatgatgcaattgaactgttggaatttgttgttgggatgagggaagaaaagctagggacagctaatcctgatgtggatgatgagaaaagaaggttggctgatttattgaaagaaacgggcaaagttcggaacagaaaagccagatcactagagaacctccttgatgccaactctcatggtataaacaatgatggaatcaaggtatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001655 GO:0001822 GO:0001889 GO:0001894 GO:0001895 GO:0001947 GO:0002009 GO:0003007 GO:0003143 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003341 GO:0003351 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005929 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007369 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0030323 GO:0030324 GO:0031016 GO:0032501 GO:0032502 GO:0035050 GO:0035239 GO:0035295 GO:0035469 GO:0042592 GO:0042995 GO:0043226 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044782 GO:0045494 GO:0045595 GO:0045596 GO:0045995 GO:0048496 GO:0048513 GO:0048519 GO:0048523 GO:0048562 GO:0048565 GO:0048568 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0048871 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051239 GO:0051960 GO:0055123 GO:0060026 GO:0060027 GO:0060249 GO:0060271 GO:0060287 GO:0060429 GO:0060541 GO:0060562 GO:0060828 GO:0060993 GO:0061008 GO:0061371 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071907 GO:0071908 GO:0071909 GO:0071910 GO:0072001 GO:0072189 GO:0072359 GO:0090090 GO:0090175 GO:0090178 GO:0120025 GO:0120031 GO:0120036 GO:1905276 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095 GO:2000167
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_7 TPR_8

Protein Analysis

692

Amino Acids

75.92

Weight (kDa)

5.29

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010793)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27500 AT1G27500
fragaria_vesca FvH4_5g05250 FvH4_5g05250 FvH4_5g05250
malus_domestica MD06G1174800.v1.1 MD14G1181500.v1.1
prunus_persica Prupe.5G174500_v2.0.a1 Prupe.5G174500_v2.0.a1
pyrus_communis pycom06g15580 pycom14g15090
rosa_chinensis RchiOBHm_Chr7g0193621
rosa_laevigata RLG00000004255
rosa_multiflora Rmu_sc0042944.1_g000001
rosa_roxburghii Rroxscaffold_3G00261950
rosa_rugosa Rorug07G0011200
rosa_samantha Rh7BG137900 Rh7CG141500 Rh7DG139100
rosa_wichuraiana Rw7G011730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1092
Acc16I TGCGCA 1 cut(s) 885
Acc36I ACCTGC 1 cut(s) 346
AccB7I CCANNNNNTGG 3 cut(s) 944, 1183, 1316
AccI GTMKAC 1 cut(s) 360
AccII CGCG 1 cut(s) 1665
AciI CCGC 1 cut(s) 1663
AclI AACGTT 1 cut(s) 1735
AclWI GGATC 2 cut(s) 929, 942
AcoI YGGCCR 1 cut(s) 1174
AcsI RAATTY 7 cut(s) 818, 874, 906, 918, 1404, 1760, 1895
AcuI CTGAAG 2 cut(s) 582, 990
AfaI GTAC 3 cut(s) 310, 740, 1731
AfeI AGCGCT 1 cut(s) 767
AflIII ACRYGT 1 cut(s) 1605
AgsI TTSAA 9 cut(s) 99, 210, 656, 983, 1285, 1642, 1769, 1886, 1981
AjnI CCWGG 3 cut(s) 555, 1176, 1549
AjuI GAANNNNNNNTTGG 8 cut(s) 905, 937, 1592, 1624, 1887, 1919, 1949, 1981
Alw21I GWGCWC 3 cut(s) 83, 349, 1497
Alw26I GTCTC 5 cut(s) 362, 1078, 1209, 1239, 1460
AlwI GGATC 2 cut(s) 929, 942
Ama87I CYCGRG 1 cut(s) 1496
Aor51HI AGCGCT 1 cut(s) 767
AoxI GGCC 6 cut(s) 560, 733, 796, 862, 1174, 1802
ApeKI GCWGC 5 cut(s) 49, 1073, 1127, 1206, 1469
ApoI RAATTY 7 cut(s) 818, 874, 906, 918, 1404, 1760, 1895
Asp700I GAANNNNTTC 1 cut(s) 1280
AspLEI GCGC 4 cut(s) 153, 768, 886, 1667
AspS9I GGNCC 4 cut(s) 553, 560, 862, 1802
AsuC2I CCSGG 1 cut(s) 1425
AsuHPI GGTGA 6 cut(s) 84, 480, 774, 854, 959, 1802
AsuII TTCGAA 1 cut(s) 1402
AvaI CYCGRG 1 cut(s) 1496
AvaII GGWCC 1 cut(s) 553
AxyI CCTNAGG 1 cut(s) 1437
BalI TGGCCA 1 cut(s) 1176
BamHI GGATCC 1 cut(s) 934
BanII GRGCYC 2 cut(s) 83, 1497
Bbv12I GWGCWC 3 cut(s) 83, 349, 1497
BbvI GCAGC 5 cut(s) 61, 1085, 1139, 1218, 1481
BccI CCATC 5 cut(s) 113, 162, 1318, 1658, 2057
BcgI CGANNNNNNTGC 2 cut(s) 340, 374
BciT130I CCWGG 3 cut(s) 557, 1178, 1551
BclI TGATCA 2 cut(s) 10, 85
BcnI CCSGG 1 cut(s) 1425
BcoDI GTCTC 5 cut(s) 362, 1078, 1209, 1239, 1460
BfaI CTAG 4 cut(s) 132, 689, 1925, 2021
BfmI CTRYAG 1 cut(s) 724
BfoI RGCGCY 1 cut(s) 769
BfuAI ACCTGC 1 cut(s) 346
BglI GCCNNNNNGGC 1 cut(s) 1157
BisI GCNGC 5 cut(s) 50, 1074, 1128, 1207, 1470
BlsI GCNGC 5 cut(s) 51, 1075, 1129, 1208, 1471
Bme1390I CCNGG 4 cut(s) 557, 1178, 1425, 1551
Bme18I GGWCC 1 cut(s) 553
BmeT110I CYCGRG 1 cut(s) 1496
BmgT120I GGNCC 4 cut(s) 553, 560, 862, 1802
BmiI GGNNCC 5 cut(s) 502, 520, 561, 936, 1051
BmrFI CCNGG 4 cut(s) 557, 1178, 1425, 1551
BmsI GCATC 5 cut(s) 1147, 1534, 1846, 1867, 2026
BpmI CTGGAG 2 cut(s) 516, 1692
Bpu10I CCTNAGC 1 cut(s) 730
Bpu14I TTCGAA 1 cut(s) 1402
BpuEI CTTGAG 4 cut(s) 644, 782, 1154, 1740
BpuMI CCSGG 1 cut(s) 1425
BsaI GGTCTC 1 cut(s) 1460
BsaJI CCNNGG 4 cut(s) 390, 522, 556, 1549
BsaWI WCCGGW 2 cut(s) 16, 754
BsaXI ACNNNNNCTCC 2 cut(s) 1781, 1811
Bse1I ACTGG 6 cut(s) 215, 520, 736, 873, 901, 1675
Bse21I CCTNAGG 1 cut(s) 1437
BseBI CCWGG 3 cut(s) 557, 1178, 1551
BseDI CCNNGG 4 cut(s) 390, 522, 556, 1549
BseGI GGATG 7 cut(s) 13, 226, 1306, 1329, 1879, 1914, 1954
BseMII CTCAG 1 cut(s) 1428
BseNI ACTGG 6 cut(s) 215, 520, 736, 873, 901, 1675
BseRI GAGGAG 4 cut(s) 140, 180, 212, 1013
BseXI GCAGC 5 cut(s) 61, 1085, 1139, 1218, 1481
BseYI CCCAGC 2 cut(s) 859, 1054
Bsh1236I CGCG 1 cut(s) 1665
BshFI GGCC 6 cut(s) 562, 735, 798, 864, 1176, 1804
BsiHKAI GWGCWC 3 cut(s) 83, 349, 1497
BsiHKCI CYCGRG 1 cut(s) 1496
BsiSI CCGG 3 cut(s) 17, 755, 1425
BslFI GGGAC 2 cut(s) 1415, 1942
BsmAI GTCTC 5 cut(s) 362, 1078, 1209, 1239, 1460
BsmFI GGGAC 2 cut(s) 1415, 1942
BsmI GAATGC 3 cut(s) 205, 1399, 1651
BsnI GGCC 6 cut(s) 562, 735, 798, 864, 1176, 1804
Bso31I GGTCTC 1 cut(s) 1460
BsoBI CYCGRG 1 cut(s) 1496
Bsp119I TTCGAA 1 cut(s) 1402
Bsp1286I GDGCHC 3 cut(s) 83, 349, 1497
Bsp1407I TGTACA 1 cut(s) 1729
Bsp143I GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
BspACI CCGC 1 cut(s) 1663
BspANI GGCC 6 cut(s) 562, 735, 798, 864, 1176, 1804
BspCNI CTCAG 1 cut(s) 1429
BspFNI CGCG 1 cut(s) 1665
BspHI TCATGA 2 cut(s) 1120, 1596
BspLI GGNNCC 5 cut(s) 502, 520, 561, 936, 1051
BspMI ACCTGC 1 cut(s) 346
BspPI GGATC 2 cut(s) 929, 942
BspQI GCTCTTC 1 cut(s) 1404
BspT104I TTCGAA 1 cut(s) 1402
BspTNI GGTCTC 1 cut(s) 1460
BsrGI TGTACA 1 cut(s) 1729
BsrI ACTGG 6 cut(s) 215, 520, 736, 873, 901, 1675
BssECI CCNNGG 4 cut(s) 390, 522, 556, 1549
BssMI GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
BssT1I CCWWGG 1 cut(s) 390
Bst2UI CCWGG 3 cut(s) 557, 1178, 1551
Bst4CI ACNGT 6 cut(s) 725, 743, 1388, 1567, 1783, 1890
Bst6I CTCTTC 3 cut(s) 189, 1062, 1404
BstAUI TGTACA 1 cut(s) 1729
BstBI TTCGAA 1 cut(s) 1402
BstC8I GCNNGC 7 cut(s) 349, 353, 579, 1153, 1503, 1722, 1846
BstDEI CTNAG 3 cut(s) 682, 730, 1437
BstENI CCTNNNNNAGG 1 cut(s) 495
BstF5I GGATG 7 cut(s) 13, 226, 1306, 1329, 1879, 1914, 1954
BstFNI CGCG 1 cut(s) 1665
BstH2I RGCGCY 1 cut(s) 769
BstHHI GCGC 4 cut(s) 153, 768, 886, 1667
BstKTI GATC 7 cut(s) 13, 88, 116, 805, 937, 1120, 2018
BstMAI GTCTC 5 cut(s) 362, 1078, 1209, 1239, 1460
BstMBI GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
BstMWI GCNNNNNNNGC 8 cut(s) 211, 638, 821, 890, 1157, 1166, 1256, 1833
BstNI CCWGG 3 cut(s) 557, 1178, 1551
BstNSI RCATGY 5 cut(s) 76, 355, 707, 835, 1609
BstSCI CCNGG 4 cut(s) 555, 1176, 1423, 1549
BstSFI CTRYAG 1 cut(s) 724
BstUI CGCG 1 cut(s) 1665
BstV1I GCAGC 5 cut(s) 61, 1085, 1139, 1218, 1481
BstX2I RGATCY 1 cut(s) 934
BstXI CCANNNNNNTGG 1 cut(s) 161
BstYI RGATCY 1 cut(s) 934
Bsu36I CCTNAGG 1 cut(s) 1437
BsuRI GGCC 6 cut(s) 562, 735, 798, 864, 1176, 1804
BtsCI GGATG 7 cut(s) 13, 226, 1306, 1329, 1879, 1914, 1954
BtsIMutI CAGTG 3 cut(s) 222, 748, 1271
BveI ACCTGC 1 cut(s) 346
Cac8I GCNNGC 7 cut(s) 349, 353, 579, 1153, 1503, 1722, 1846
CciI TCATGA 2 cut(s) 1120, 1596
CfoI GCGC 4 cut(s) 153, 768, 886, 1667
Cfr13I GGNCC 4 cut(s) 553, 560, 862, 1802
Csp6I GTAC 3 cut(s) 309, 739, 1730
CspCI CAANNNNNGTGG 4 cut(s) 198, 233, 435, 470
CviQI GTAC 3 cut(s) 309, 739, 1730
DdeI CTNAG 3 cut(s) 682, 730, 1437
DpnI GATC 7 cut(s) 12, 87, 115, 804, 936, 1119, 2017
DpnII GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
DrdI GACNNNNNNGTC 1 cut(s) 1092
DseDI GACNNNNNNGTC 1 cut(s) 1092
EaeI YGGCCR 1 cut(s) 1174
Eam1104I CTCTTC 3 cut(s) 189, 1062, 1404
EarI CTCTTC 3 cut(s) 189, 1062, 1404
Ecl136II GAGCTC 2 cut(s) 81, 1495
Eco130I CCWWGG 1 cut(s) 390
Eco24I GRGCYC 2 cut(s) 83, 1497
Eco31I GGTCTC 1 cut(s) 1460
Eco32I GATATC 1 cut(s) 962
Eco47I GGWCC 1 cut(s) 553
Eco47III AGCGCT 1 cut(s) 767
Eco53kI GAGCTC 2 cut(s) 81, 1495
Eco57I CTGAAG 2 cut(s) 582, 990
Eco81I CCTNAGG 1 cut(s) 1437
Eco88I CYCGRG 1 cut(s) 1496
EcoICRI GAGCTC 2 cut(s) 81, 1495
EcoNI CCTNNNNNAGG 1 cut(s) 495
EcoRI GAATTC 1 cut(s) 1760
EcoRII CCWGG 3 cut(s) 555, 1176, 1549
EcoRV GATATC 1 cut(s) 962
EcoT14I CCWWGG 1 cut(s) 390
EcoT38I GRGCYC 2 cut(s) 83, 1497
ErhI CCWWGG 1 cut(s) 390
FalI AAGNNNNNCTT 2 cut(s) 1116, 1148
FaqI GGGAC 2 cut(s) 1415, 1942
FbaI TGATCA 2 cut(s) 10, 85
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 5 cut(s) 50, 1074, 1128, 1207, 1470
FokI GGATG 6 cut(s) 233, 1293, 1316, 1886, 1921, 1961
FriOI GRGCYC 2 cut(s) 83, 1497
Fsp4HI GCNGC 5 cut(s) 50, 1074, 1128, 1207, 1470
FspBI CTAG 4 cut(s) 132, 689, 1925, 2021
FspI TGCGCA 1 cut(s) 885
GlaI GCGC 4 cut(s) 152, 767, 885, 1666
GluI GCNGC 5 cut(s) 50, 1074, 1128, 1207, 1470
GsaI CCCAGC 2 cut(s) 863, 1058
GsuI CTGGAG 2 cut(s) 516, 1692
HaeII RGCGCY 1 cut(s) 769
HaeIII GGCC 6 cut(s) 562, 735, 798, 864, 1176, 1804
HapII CCGG 3 cut(s) 17, 755, 1425
HhaI GCGC 4 cut(s) 153, 768, 886, 1667
Hin6I GCGC 4 cut(s) 151, 766, 884, 1665
HinP1I GCGC 4 cut(s) 151, 766, 884, 1665
HincII GTYRAC 3 cut(s) 34, 361, 1201
HindII GTYRAC 3 cut(s) 34, 361, 1201
HpaII CCGG 3 cut(s) 17, 755, 1425
HphI GGTGA 6 cut(s) 84, 480, 774, 854, 959, 1802
Hpy166II GTNNAC 4 cut(s) 34, 361, 1201, 1730
Hpy8I GTNNAC 4 cut(s) 34, 361, 1201, 1730
HpyCH4III ACNGT 6 cut(s) 725, 743, 1388, 1567, 1783, 1890
HpyCH4IV ACGT 1 cut(s) 1735
HpyF10VI GCNNNNNNNGC 8 cut(s) 211, 638, 821, 890, 1157, 1166, 1256, 1833
HpyF3I CTNAG 3 cut(s) 682, 730, 1437
HpySE526I ACGT 1 cut(s) 1735
HspAI GCGC 4 cut(s) 151, 766, 884, 1665
Ksp22I TGATCA 2 cut(s) 10, 85
Kzo9I GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
LguI GCTCTTC 1 cut(s) 1404
LmnI GCTCC 4 cut(s) 458, 506, 1665, 1789
Lsp1109I GCAGC 5 cut(s) 61, 1085, 1139, 1218, 1481
LweI GCATC 5 cut(s) 1147, 1534, 1846, 1867, 2026
MaeI CTAG 4 cut(s) 132, 689, 1925, 2021
MaeII ACGT 1 cut(s) 1735
MaeIII GTNAC 4 cut(s) 68, 706, 827, 1515
MalI GATC 7 cut(s) 12, 87, 115, 804, 936, 1119, 2017
MboI GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
MboII GAAGA 7 cut(s) 206, 282, 588, 1079, 1391, 1781, 1928
MfeI CAATTG 3 cut(s) 42, 771, 1881
MflI RGATCY 1 cut(s) 934
MhlI GDGCHC 3 cut(s) 83, 349, 1497
MlsI TGGCCA 1 cut(s) 1176
MluNI TGGCCA 1 cut(s) 1176
MlyI GAGTC 7 cut(s) 137, 245, 356, 433, 1080, 1437, 1643
MmeI TCCRAC 4 cut(s) 142, 1843, 1851, 1872
Mox20I TGGCCA 1 cut(s) 1176
MroXI GAANNNNTTC 1 cut(s) 1280
MscI TGGCCA 1 cut(s) 1176
MseI TTAA 5 cut(s) 471, 546, 572, 1368, 1529
MslI CAYNNNNRTG 1 cut(s) 1160
Msp20I TGGCCA 1 cut(s) 1176
MspA1I CMGCKG 1 cut(s) 533
MspI CCGG 3 cut(s) 17, 755, 1425
MspR9I CCNGG 4 cut(s) 557, 1178, 1425, 1551
MunI CAATTG 3 cut(s) 42, 771, 1881
Mva1269I GAATGC 3 cut(s) 205, 1399, 1651
MvaI CCWGG 3 cut(s) 557, 1178, 1551
MvnI CGCG 1 cut(s) 1665
MwoI GCNNNNNNNGC 8 cut(s) 211, 638, 821, 890, 1157, 1166, 1256, 1833
NciI CCSGG 1 cut(s) 1425
NdeII GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
NlaIV GGNNCC 5 cut(s) 502, 520, 561, 936, 1051
NmuCI GTSAC 2 cut(s) 68, 827
NsbI TGCGCA 1 cut(s) 885
NspI RCATGY 5 cut(s) 76, 355, 707, 835, 1609
NspV TTCGAA 1 cut(s) 1402
PaeI GCATGC 1 cut(s) 355
PaeR7I CTCGAG 1 cut(s) 1496
PagI TCATGA 2 cut(s) 1120, 1596
PciI ACATGT 1 cut(s) 1605
PciSI GCTCTTC 1 cut(s) 1404
PctI GAATGC 3 cut(s) 205, 1399, 1651
PdmI GAANNNNTTC 1 cut(s) 1280
PfeI GAWTC 9 cut(s) 140, 224, 527, 536, 1303, 1373, 1481, 1625, 2067
PflMI CCANNNNNTGG 3 cut(s) 944, 1183, 1316
PkrI GCNGC 5 cut(s) 51, 1075, 1129, 1208, 1471
PleI GAGTC 7 cut(s) 136, 244, 356, 433, 1080, 1436, 1642
PpsI GAGTC 7 cut(s) 136, 244, 356, 433, 1080, 1436, 1642
PscI ACATGT 1 cut(s) 1605
Psp124BI GAGCTC 2 cut(s) 83, 1497
Psp1406I AACGTT 1 cut(s) 1735
Psp6I CCWGG 3 cut(s) 555, 1176, 1549
PspFI CCCAGC 2 cut(s) 859, 1054
PspGI CCWGG 3 cut(s) 555, 1176, 1549
PspN4I GGNNCC 5 cut(s) 502, 520, 561, 936, 1051
PspPI GGNCC 4 cut(s) 553, 560, 862, 1802
PspXI VCTCGAGB 1 cut(s) 1496
PsuI RGATCY 1 cut(s) 934
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 3 cut(s) 310, 740, 1731
RsaNI GTAC 3 cut(s) 309, 739, 1730
RseI CAYNNNNRTG 1 cut(s) 1160
SacI GAGCTC 2 cut(s) 83, 1497
SalI GTCGAC 1 cut(s) 359
SapI GCTCTTC 1 cut(s) 1404
SaqAI TTAA 5 cut(s) 471, 546, 572, 1368, 1529
SatI GCNGC 5 cut(s) 50, 1074, 1128, 1207, 1470
Sau3AI GATC 7 cut(s) 10, 85, 113, 802, 934, 1117, 2015
Sau96I GGNCC 4 cut(s) 553, 560, 862, 1802
SchI GAGTC 7 cut(s) 137, 245, 356, 433, 1080, 1437, 1643
ScrFI CCNGG 4 cut(s) 557, 1178, 1425, 1551
SduI GDGCHC 3 cut(s) 83, 349, 1497
SfaNI GCATC 5 cut(s) 1147, 1534, 1846, 1867, 2026
SfcI CTRYAG 1 cut(s) 724
Sfr274I CTCGAG 1 cut(s) 1496
SfuI TTCGAA 1 cut(s) 1402
SinI GGWCC 1 cut(s) 553
SlaI CTCGAG 1 cut(s) 1496
SmiMI CAYNNNNRTG 1 cut(s) 1160
SmlI CTYRAG 5 cut(s) 623, 761, 1133, 1496, 1755
SmoI CTYRAG 5 cut(s) 623, 761, 1133, 1496, 1755
SphI GCATGC 1 cut(s) 355
SsiI CCGC 1 cut(s) 1663
SspMI CTAG 4 cut(s) 132, 689, 1925, 2021
SstI GAGCTC 2 cut(s) 83, 1497
StyD4I CCNGG 4 cut(s) 555, 1176, 1423, 1549
StyI CCWWGG 1 cut(s) 390
TaaI ACNGT 6 cut(s) 725, 743, 1388, 1567, 1783, 1890
TaiI ACGT 1 cut(s) 1738
TaqI TCGA 5 cut(s) 112, 360, 637, 1402, 1497
TatI WGTACW 3 cut(s) 308, 738, 1729
TfiI GAWTC 9 cut(s) 140, 224, 527, 536, 1303, 1373, 1481, 1625, 2067
Tru1I TTAA 5 cut(s) 471, 546, 572, 1368, 1529
Tru9I TTAA 5 cut(s) 471, 546, 572, 1368, 1529
TscAI CASTG 3 cut(s) 222, 748, 1278
TseFI GTSAC 2 cut(s) 68, 827
TseI GCWGC 5 cut(s) 49, 1073, 1127, 1206, 1469
Tsp45I GTSAC 2 cut(s) 68, 827
TspDTI ATGAA 8 cut(s) 363, 1137, 1318, 1425, 1494, 1502, 1613, 1764
TspGWI ACGGA 2 cut(s) 947, 1322
TspRI CASTG 3 cut(s) 222, 748, 1278
Van91I CCANNNNNTGG 3 cut(s) 944, 1183, 1316
VpaK11BI GGWCC 1 cut(s) 553
XagI CCTNNNNNAGG 1 cut(s) 495
XapI RAATTY 7 cut(s) 818, 874, 906, 918, 1404, 1760, 1895
XceI RCATGY 5 cut(s) 76, 355, 707, 835, 1609
XcmI CCANNNNNNNNNTGG 2 cut(s) 1159, 1783
XhoI CTCGAG 1 cut(s) 1496
XmiI GTMKAC 1 cut(s) 360
XmnI GAANNNNTTC 1 cut(s) 1280
XspI CTAG 4 cut(s) 132, 689, 1925, 2021
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.