Prupe.5G174500_v2.0.a1

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0010793
Physical Location & Seq
Reverse (-)
14858998 .. 14863060
4063 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G174500.2

Sequence Viewer

Length: 2199 bp
ATGCCTGGAATTGTTGAAGAGGTTGTATATGAATCGAATGGAAATTCCATGCCTAATAAGGAAAACCCAGCTCTAAATGGCTTCCCAAAGGGTACTATGAGTCAGCAAAGTCCTGGGAGTACAGGACCTGATCGTCCAGTTGATGGGGTGGTTGACACCTCAATTGAGCAGCTTTATGAGAATGTGTGCGATATGCAGAGTTCTGATCAGTCACCCTCAAGACGTAGTTTTCGATCGGATGGTGAGGAGTCTAGGATTGATTCGGAGTTACACCATCTTGTTGGAGGAGAGATGAGAGAGGTGGAGATAATGGAAGAGGAAGTTCTACAAAAGCCAGCGTATGATTCTCGTAGTGATTCAAGTTTTAAGAAGGAAGCTTCATCCTTGGATAGAAAACCAGTAAAGATGGATAAATCTGCAAGTACAAAATCCACTTCTTCAGGGAACTCTAAGAAAGTTGCTCACTTGCAGGTGGACACTGAAACTTCATCAAAACCAGTGTTGAAGGGAAGAAGTCCTGATAAACCTCCCATTTATGGGGTTAGTGATAAGAATCCACAAAAACAACATGCAGGACCCACTTCTGTGAAGAAACGCAGGAATGCATCTTCAGGAGGGTCAAAGTTGCAGATTGGAACTGAGGATGTGGCTGAATCAGGATTAAACAATCCGGATCTTGGGCCGTTTTTGCTTAAGCAAGCTAGGGATTTGATTTCTTCAGGGGATAATCCCCAGAAGGCTCTTGAATTAGCTCTTCGAGCTGCAAAATCGTTTGAATTATCTTCAAATGGGAAACCCTGTTTAGAGCTAGTAATGTGTTTGCATGTTACATCGGCGATTTACTGTAGCTTAGGCCAGTACAGTAAGGCAATTCCTGTTCTCGAGCGCTCAATTGAGATTTCAGCTATTGAGGAAGACCAAAATCATGCCCTTGCTAAATTTGCTGGCCACATGCAGTTGGGTGATACTTATGCTATGCTGGGCCAACTTGAGAATTCAATTATGCATTACACAAGTGGATTGGAAATCCAAAGACAAGTTTTGGGAGAAACAGATGTACGAGTGGGTGAGACTTGTCGGTATCTGGCTGAAGCTCATGTTCAAGCGCTGCAATTTGATGAGGCTCAGAGGCTTTGCCAGATGTCTCTTGACAGTCATAAAGAGAATGGTTCCCCAGCTTCTCTGGAAGAGGCAGCAGATAGGAGACTGATGGGTCTTATATGTGAAACGAAGGGAGATCATGAAGCTGCTCTTGAGCACCTTGTTTTAGCCAGCATGGCTATGGTTGCAAATGGCCAGGAAGTGGAGGTGGCTTCTGTCGATTGCAGCATTGGAGACACGTACTTATCTTTGTCTCGGTATGATGAAGCTACTTTTGCTTATCAGAAGGCACTGACTGTGTTCAAGACCACCAAAGGAGAGAACCATCCATCTGTTGGTTCAGTCTTTATCCGTCTGGCTGATTTGTATAACAGGACCGGGAAAGTTAGAGAATCAAAATCATACTGTGAGAATGCCCTTAGAATTTATGAAAAGCCCATGCCTGGAGTCCCTCCTGAGGAAATGGCAAGTGGTCTCACAGATGTTTCTGCTATATATGAATCAATGAATGACCTTGAGCAGGCAGTCAAGTTGCTACAGAAGGCGTTAAAAATATACAATGATGCCCCTGGTCAGCAAAGCACAATTGCCGGGATTGAAGCTCAAATGGGGGTCATGTACTACATGTTGGGGAATTATTCGGAGTCTTACGACTCCTTTAAAAGTGCGATTTCAAAGCTCCGTGCAACTGGAGAGAAGAAAACTGCCTTTTTCGGAATTGTTCTTAACCAAATGGGGCTTGCTTGTGTACAACGTTATTCCATAAATGAGGCTCAAGAATTCTTCGAAGAAGCCAGGACTGTCTTGGAACATGAGTGTGGGCGGTATCACCCTGATACACTTGGGGTTTATAGCAATCTTGCTGGCACTTATGATGCAACTGGCAGGTTGGAGGATGCAATTGAAATCTTGGAGTACGTCGTTGAGATGAGAGAAGAAAAACTTGGGACAGCTAATCCTGATGTAGATGATGAGAAAAGAAGGTTGGCTGAGTTATTGAAAGAAGCAGGCAGAGTTCGGAGCAGAAAAGCCAGATCACTAGAGAACCTCCTTGATGCCAACTCCCACAGTATAAGCAATGATGGTGTTAAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001655 GO:0001822 GO:0001889 GO:0001894 GO:0001895 GO:0001947 GO:0002009 GO:0003007 GO:0003143 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003341 GO:0003351 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005929 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007369 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0030323 GO:0030324 GO:0031016 GO:0032501 GO:0032502 GO:0035050 GO:0035239 GO:0035295 GO:0035469 GO:0042592 GO:0042995 GO:0043226 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044782 GO:0045494 GO:0045595 GO:0045596 GO:0045995 GO:0048496 GO:0048513 GO:0048519 GO:0048523 GO:0048562 GO:0048565 GO:0048568 GO:0048583 GO:0048585 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0048871 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051239 GO:0051960 GO:0055123 GO:0060026 GO:0060027 GO:0060249 GO:0060271 GO:0060287 GO:0060429 GO:0060541 GO:0060562 GO:0060828 GO:0060993 GO:0061008 GO:0061371 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071907 GO:0071908 GO:0071909 GO:0071910 GO:0072001 GO:0072189 GO:0072359 GO:0090090 GO:0090175 GO:0090178 GO:0120025 GO:0120031 GO:0120036 GO:1905276 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095 GO:2000167
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_7 TPR_8

Protein Analysis

733

Amino Acids

80.4

Weight (kDa)

5.19

Isoelectric Point (pI)

47.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010793)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27500 AT1G27500
fragaria_vesca FvH4_5g05250 FvH4_5g05250 FvH4_5g05250
malus_domestica MD06G1174800.v1.1 MD14G1181500.v1.1
prunus_persica Prupe.5G174500_v2.0.a1 Prupe.5G174500_v2.0.a1
pyrus_communis pycom06g15580 pycom14g15090
rosa_chinensis RchiOBHm_Chr7g0193621
rosa_laevigata RLG00000004255
rosa_multiflora Rmu_sc0042944.1_g000001
rosa_roxburghii Rroxscaffold_3G00261950
rosa_rugosa Rorug07G0011200
rosa_samantha Rh7BG137900 Rh7CG141500 Rh7DG139100
rosa_wichuraiana Rw7G011730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 460
AasI GACNNNNNNGTC 2 cut(s) 132, 1212
Acc36I ACCTGC 2 cut(s) 460, 1977
AccB7I CCANNNNNTGG 3 cut(s) 143, 1303, 1436
AccIII TCCGGA 1 cut(s) 670
AciI CCGC 1 cut(s) 1924
AclI AACGTT 1 cut(s) 1855
AclWI GGATC 1 cut(s) 681
AcoI YGGCCR 2 cut(s) 946, 1294
AcsI RAATTY 5 cut(s) 43, 938, 994, 1524, 1880
AcuI CTGAAG 4 cut(s) 423, 594, 702, 1110
AfaI GTAC 9 cut(s) 94, 121, 424, 860, 1059, 1343, 1721, 1851, 2018
AfeI AGCGCT 2 cut(s) 887, 1107
AfiI CCNNNNNNNGG 9 cut(s) 143, 536, 537, 677, 1303, 1436, 1544, 1558, 1621
AflII CTTAAG 1 cut(s) 692
AflIII ACRYGT 2 cut(s) 1338, 1725
AjnI CCWGG 6 cut(s) 4, 112, 1296, 1543, 1669, 1895
AjuI GAANNNNNNNTTGG 4 cut(s) 2028, 2060, 2069, 2101
AleI CACNNNNGTG 1 cut(s) 584
Alw21I GWGCWC 1 cut(s) 1260
Alw26I GTCTC 6 cut(s) 1064, 1149, 1198, 1329, 1359, 1580
AlwI GGATC 1 cut(s) 681
AlwNI CAGNNNCTG 1 cut(s) 128
Ama87I CYCGRG 1 cut(s) 881
Aor13HI TCCGGA 1 cut(s) 670
Aor51HI AGCGCT 2 cut(s) 887, 1107
AoxI GGCC 5 cut(s) 680, 853, 946, 982, 1294
ApeKI GCWGC 6 cut(s) 169, 761, 1108, 1193, 1247, 1326
ApoI RAATTY 5 cut(s) 43, 938, 994, 1524, 1880
ArsI GACNNNNNNTTYG 2 cut(s) 213, 245
AspLEI GCGC 2 cut(s) 888, 1108
AspS9I GGNCC 5 cut(s) 125, 575, 680, 982, 1476
AsuC2I CCSGG 2 cut(s) 1480, 1693
AsuHPI GGTGA 5 cut(s) 204, 254, 974, 1079, 1922
AsuII TTCGAA 1 cut(s) 1887
AvaI CYCGRG 1 cut(s) 881
AvaII GGWCC 3 cut(s) 125, 575, 1476
AxyI CCTNAGG 1 cut(s) 1557
BalI TGGCCA 2 cut(s) 948, 1296
BbsI GAAGAC 1 cut(s) 921
Bbv12I GWGCWC 1 cut(s) 1260
BbvI GCAGC 6 cut(s) 181, 748, 1095, 1205, 1234, 1338
BccI CCATC 8 cut(s) 137, 233, 282, 400, 1204, 1434, 1438, 2177
BceAI ACGGC 1 cut(s) 667
BciT130I CCWGG 6 cut(s) 6, 114, 1298, 1545, 1671, 1897
BclI TGATCA 1 cut(s) 205
BcnI CCSGG 2 cut(s) 1480, 1693
BcoDI GTCTC 6 cut(s) 1064, 1149, 1198, 1329, 1359, 1580
BfaI CTAG 4 cut(s) 252, 702, 809, 2141
BfmI CTRYAG 2 cut(s) 844, 1637
BfoI RGCGCY 2 cut(s) 889, 1109
BfrI CTTAAG 1 cut(s) 692
BfuAI ACCTGC 2 cut(s) 460, 1977
BglI GCCNNNNNGGC 1 cut(s) 1277
BisI GCNGC 6 cut(s) 170, 762, 1109, 1194, 1248, 1327
BlsI GCNGC 6 cut(s) 171, 763, 1110, 1195, 1249, 1328
Bme1390I CCNGG 8 cut(s) 6, 114, 1298, 1480, 1545, 1671, 1693, 1897
Bme18I GGWCC 3 cut(s) 125, 575, 1476
BmeT110I CYCGRG 1 cut(s) 881
BmgT120I GGNCC 5 cut(s) 125, 575, 680, 982, 1476
BmiI GGNNCC 2 cut(s) 577, 1171
BmrFI CCNGG 8 cut(s) 6, 114, 1298, 1480, 1545, 1671, 1693, 1897
BmsI GCATC 5 cut(s) 614, 1654, 1966, 1987, 2146
BpiI GAAGAC 1 cut(s) 921
BpmI CTGGAG 2 cut(s) 1566, 1812
Bpu10I CCTNAGC 1 cut(s) 850
Bpu14I TTCGAA 1 cut(s) 1887
BpuEI CTTGAG 5 cut(s) 202, 1010, 1274, 1637, 1860
BpuMI CCSGG 2 cut(s) 1480, 1693
BsaAI YACGTR 1 cut(s) 1341
BsaBI GATNNNNATC 1 cut(s) 552
BsaI GGTCTC 1 cut(s) 1580
BsaJI CCNNGG 3 cut(s) 113, 384, 1669
BsaWI WCCGGW 1 cut(s) 670
Bsc4I CCNNNNNNNGG 9 cut(s) 143, 536, 537, 677, 1303, 1436, 1544, 1558, 1621
Bse1I ACTGG 6 cut(s) 137, 398, 497, 856, 1795, 1987
Bse21I CCTNAGG 1 cut(s) 1557
Bse3DI GCAATG 1 cut(s) 2185
Bse8I GATNNNNATC 1 cut(s) 552
BseAI TCCGGA 1 cut(s) 670
BseBI CCWGG 6 cut(s) 6, 114, 1298, 1545, 1671, 1897
BseDI CCNNGG 3 cut(s) 113, 384, 1669
BseGI GGATG 5 cut(s) 244, 380, 649, 1426, 2002
BseJI GATNNNNATC 1 cut(s) 552
BseLI CCNNNNNNNGG 9 cut(s) 143, 536, 537, 677, 1303, 1436, 1544, 1558, 1621
BseMI GCAATG 1 cut(s) 2185
BseMII CTCAG 4 cut(s) 630, 1139, 1548, 2082
BseNI ACTGG 6 cut(s) 137, 398, 497, 856, 1795, 1987
BseRI GAGGAG 2 cut(s) 260, 300
BseXI GCAGC 6 cut(s) 181, 748, 1095, 1205, 1234, 1338
BseYI CCCAGC 3 cut(s) 67, 979, 1174
Bsh1285I CGRYCG 1 cut(s) 236
BshFI GGCC 5 cut(s) 682, 855, 948, 984, 1296
BsiEI CGRYCG 1 cut(s) 236
BsiHKAI GWGCWC 1 cut(s) 1260
BsiHKCI CYCGRG 1 cut(s) 881
BsiSI CCGG 3 cut(s) 671, 1479, 1692
BslFI GGGAC 2 cut(s) 1535, 2062
BslI CCNNNNNNNGG 9 cut(s) 143, 536, 537, 677, 1303, 1436, 1544, 1558, 1621
BsmAI GTCTC 6 cut(s) 1064, 1149, 1198, 1329, 1359, 1580
BsmFI GGGAC 2 cut(s) 1535, 2062
BsmI GAATGC 2 cut(s) 607, 1519
BsnI GGCC 5 cut(s) 682, 855, 948, 984, 1296
Bso31I GGTCTC 1 cut(s) 1580
BsoBI CYCGRG 1 cut(s) 881
Bsp119I TTCGAA 1 cut(s) 1887
Bsp1286I GDGCHC 1 cut(s) 1260
Bsp13I TCCGGA 1 cut(s) 670
Bsp1407I TGTACA 1 cut(s) 1849
Bsp143I GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
BspACI CCGC 1 cut(s) 1924
BspANI GGCC 5 cut(s) 682, 855, 948, 984, 1296
BspCNI CTCAG 4 cut(s) 631, 1138, 1549, 2083
BspEI TCCGGA 1 cut(s) 670
BspHI TCATGA 1 cut(s) 1240
BspLI GGNNCC 2 cut(s) 577, 1171
BspMI ACCTGC 2 cut(s) 460, 1977
BspPI GGATC 1 cut(s) 681
BspQI GCTCTTC 1 cut(s) 759
BspT104I TTCGAA 1 cut(s) 1887
BspTI CTTAAG 1 cut(s) 692
BspTNI GGTCTC 1 cut(s) 1580
BsrDI GCAATG 1 cut(s) 2185
BsrGI TGTACA 1 cut(s) 1849
BsrI ACTGG 6 cut(s) 137, 398, 497, 856, 1795, 1987
BssECI CCNNGG 3 cut(s) 113, 384, 1669
BssMI GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
BssT1I CCWWGG 1 cut(s) 384
Bst2UI CCWGG 6 cut(s) 6, 114, 1298, 1545, 1671, 1897
Bst4CI ACNGT 7 cut(s) 845, 863, 1154, 1399, 1508, 1903, 2171
Bst6I CTCTTC 4 cut(s) 12, 309, 759, 1182
BstAFI CTTAAG 1 cut(s) 692
BstAUI TGTACA 1 cut(s) 1849
BstBAI YACGTR 1 cut(s) 1341
BstBI TTCGAA 1 cut(s) 1887
BstC8I GCNNGC 8 cut(s) 336, 699, 946, 1273, 1623, 1842, 1966, 2110
BstDEI CTNAG 7 cut(s) 450, 639, 850, 1125, 1520, 1557, 2091
BstENI CCTNNNNNAGG 1 cut(s) 1619
BstF5I GGATG 5 cut(s) 244, 380, 649, 1426, 2002
BstH2I RGCGCY 2 cut(s) 889, 1109
BstHHI GCGC 2 cut(s) 888, 1108
BstKTI GATC 6 cut(s) 133, 208, 236, 676, 1240, 2138
BstMAI GTCTC 6 cut(s) 1064, 1149, 1198, 1329, 1359, 1580
BstMBI GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
BstMCI CGRYCG 1 cut(s) 236
BstMWI GCNNNNNNNGC 6 cut(s) 688, 758, 941, 1277, 1286, 1376
BstNI CCWGG 6 cut(s) 6, 114, 1298, 1545, 1671, 1897
BstNSI RCATGY 4 cut(s) 572, 827, 955, 1729
BstSCI CCNGG 8 cut(s) 4, 112, 1296, 1478, 1543, 1669, 1691, 1895
BstSFI CTRYAG 2 cut(s) 844, 1637
BstV1I GCAGC 6 cut(s) 181, 748, 1095, 1205, 1234, 1338
BstV2I GAAGAC 1 cut(s) 921
BstX2I RGATCY 1 cut(s) 673
BstXI CCANNNNNNTGG 1 cut(s) 281
BstYI RGATCY 1 cut(s) 673
Bsu36I CCTNAGG 1 cut(s) 1557
BsuRI GGCC 5 cut(s) 682, 855, 948, 984, 1296
BtsCI GGATG 5 cut(s) 244, 380, 649, 1426, 2002
BtsIMutI CAGTG 3 cut(s) 477, 504, 1391
BveI ACCTGC 2 cut(s) 460, 1977
Cac8I GCNNGC 8 cut(s) 336, 699, 946, 1273, 1623, 1842, 1966, 2110
CaiI CAGNNNCTG 1 cut(s) 128
CciI TCATGA 1 cut(s) 1240
CfoI GCGC 2 cut(s) 888, 1108
Cfr13I GGNCC 5 cut(s) 125, 575, 680, 982, 1476
Csp6I GTAC 9 cut(s) 93, 120, 423, 859, 1058, 1342, 1720, 1850, 2017
CviQI GTAC 9 cut(s) 93, 120, 423, 859, 1058, 1342, 1720, 1850, 2017
DdeI CTNAG 7 cut(s) 450, 639, 850, 1125, 1520, 1557, 2091
DpnI GATC 6 cut(s) 132, 207, 235, 675, 1239, 2137
DpnII GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
DraI TTTAAA 1 cut(s) 1762
DrdI GACNNNNNNGTC 2 cut(s) 132, 1212
DseDI GACNNNNNNGTC 2 cut(s) 132, 1212
EaeI YGGCCR 2 cut(s) 946, 1294
Eam1104I CTCTTC 4 cut(s) 12, 309, 759, 1182
EarI CTCTTC 4 cut(s) 12, 309, 759, 1182
Eco130I CCWWGG 1 cut(s) 384
Eco31I GGTCTC 1 cut(s) 1580
Eco47I GGWCC 3 cut(s) 125, 575, 1476
Eco47III AGCGCT 2 cut(s) 887, 1107
Eco57I CTGAAG 4 cut(s) 423, 594, 702, 1110
Eco81I CCTNAGG 1 cut(s) 1557
Eco88I CYCGRG 1 cut(s) 881
EcoNI CCTNNNNNAGG 1 cut(s) 1619
EcoO109I RGGNCCY 2 cut(s) 125, 575
EcoRI GAATTC 2 cut(s) 994, 1880
EcoRII CCWGG 6 cut(s) 4, 112, 1296, 1543, 1669, 1895
EcoT14I CCWWGG 1 cut(s) 384
EcoT22I ATGCAT 2 cut(s) 607, 1008
ErhI CCWWGG 1 cut(s) 384
FalI AAGNNNNNCTT 4 cut(s) 1236, 1268, 2028, 2060
FaqI GGGAC 2 cut(s) 1535, 2062
FbaI TGATCA 1 cut(s) 205
Fnu4HI GCNGC 6 cut(s) 170, 762, 1109, 1194, 1248, 1327
FokI GGATG 5 cut(s) 251, 367, 656, 1413, 2009
Fsp4HI GCNGC 6 cut(s) 170, 762, 1109, 1194, 1248, 1327
FspBI CTAG 4 cut(s) 252, 702, 809, 2141
GlaI GCGC 2 cut(s) 887, 1107
GluI GCNGC 6 cut(s) 170, 762, 1109, 1194, 1248, 1327
GsaI CCCAGC 3 cut(s) 71, 983, 1178
GsuI CTGGAG 2 cut(s) 1566, 1812
HaeII RGCGCY 2 cut(s) 889, 1109
HaeIII GGCC 5 cut(s) 682, 855, 948, 984, 1296
HapII CCGG 3 cut(s) 671, 1479, 1692
HhaI GCGC 2 cut(s) 888, 1108
Hin6I GCGC 2 cut(s) 886, 1106
HinP1I GCGC 2 cut(s) 886, 1106
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HindIII AAGCTT 1 cut(s) 375
HpaII CCGG 3 cut(s) 671, 1479, 1692
HphI GGTGA 5 cut(s) 204, 254, 974, 1079, 1922
Hpy166II GTNNAC 3 cut(s) 154, 475, 1850
Hpy188I TCNGA 8 cut(s) 205, 238, 265, 1128, 1386, 1744, 1817, 2121
Hpy8I GTNNAC 3 cut(s) 154, 475, 1850
Hpy99I CGWCG 1 cut(s) 2024
HpyAV CCTTC 7 cut(s) 364, 499, 730, 1225, 1381, 1636, 2076
HpyCH4III ACNGT 7 cut(s) 845, 863, 1154, 1399, 1508, 1903, 2171
HpyCH4IV ACGT 4 cut(s) 223, 1340, 1855, 2019
HpyF10VI GCNNNNNNNGC 6 cut(s) 688, 758, 941, 1277, 1286, 1376
HpyF3I CTNAG 7 cut(s) 450, 639, 850, 1125, 1520, 1557, 2091
HpySE526I ACGT 4 cut(s) 223, 1340, 1855, 2019
HspAI GCGC 2 cut(s) 886, 1106
Kpn2I TCCGGA 1 cut(s) 670
Ksp22I TGATCA 1 cut(s) 205
Kzo9I GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
LguI GCTCTTC 1 cut(s) 759
LmnI GCTCC 2 cut(s) 1785, 2121
Lsp1109I GCAGC 6 cut(s) 181, 748, 1095, 1205, 1234, 1338
LweI GCATC 5 cut(s) 614, 1654, 1966, 1987, 2146
MaeI CTAG 4 cut(s) 252, 702, 809, 2141
MaeII ACGT 4 cut(s) 223, 1340, 1855, 2019
MaeIII GTNAC 3 cut(s) 210, 267, 826
MalI GATC 6 cut(s) 132, 207, 235, 675, 1239, 2137
MboI GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
MfeI CAATTG 4 cut(s) 162, 891, 1686, 2001
MflI RGATCY 1 cut(s) 673
MhlI GDGCHC 1 cut(s) 1260
MlsI TGGCCA 2 cut(s) 948, 1296
MluNI TGGCCA 2 cut(s) 948, 1296
MlyI GAGTC 5 cut(s) 109, 257, 1557, 1748, 1754
MmeI TCCRAC 2 cut(s) 262, 1971
Mox20I TGGCCA 2 cut(s) 948, 1296
Mph1103I ATGCAT 2 cut(s) 607, 1008
MroI TCCGGA 1 cut(s) 670
MscI TGGCCA 2 cut(s) 948, 1296
MseI TTAA 7 cut(s) 366, 662, 693, 1649, 1761, 1827, 2190
MslI CAYNNNNRTG 3 cut(s) 584, 1280, 1917
Msp20I TGGCCA 2 cut(s) 948, 1296
MspCI CTTAAG 1 cut(s) 692
MspI CCGG 3 cut(s) 671, 1479, 1692
MspR9I CCNGG 8 cut(s) 6, 114, 1298, 1480, 1545, 1671, 1693, 1897
MunI CAATTG 4 cut(s) 162, 891, 1686, 2001
Mva1269I GAATGC 2 cut(s) 607, 1519
MvaI CCWGG 6 cut(s) 6, 114, 1298, 1545, 1671, 1897
MwoI GCNNNNNNNGC 6 cut(s) 688, 758, 941, 1277, 1286, 1376
NciI CCSGG 2 cut(s) 1480, 1693
NdeII GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
NlaIV GGNNCC 2 cut(s) 577, 1171
NmuCI GTSAC 1 cut(s) 210
NsiI ATGCAT 2 cut(s) 607, 1008
NspI RCATGY 4 cut(s) 572, 827, 955, 1729
NspV TTCGAA 1 cut(s) 1887
OliI CACNNNNGTG 1 cut(s) 584
PaeR7I CTCGAG 1 cut(s) 881
PagI TCATGA 1 cut(s) 1240
PaqCI CACCTGC 1 cut(s) 460
PciI ACATGT 1 cut(s) 1725
PciSI GCTCTTC 1 cut(s) 759
PcsI WCGNNNNNNNCGW 1 cut(s) 229
PctI GAATGC 2 cut(s) 607, 1519
PfeI GAWTC 8 cut(s) 32, 260, 344, 356, 553, 653, 1493, 1601
PflMI CCANNNNNTGG 3 cut(s) 143, 1303, 1436
PkrI GCNGC 6 cut(s) 171, 763, 1110, 1195, 1249, 1328
Ple19I CGATCG 1 cut(s) 236
PleI GAGTC 5 cut(s) 108, 256, 1556, 1748, 1753
PpsI GAGTC 5 cut(s) 108, 256, 1556, 1748, 1753
Ppu21I YACGTR 1 cut(s) 1341
PpuMI RGGWCCY 2 cut(s) 125, 575
PscI ACATGT 1 cut(s) 1725
Psp1406I AACGTT 1 cut(s) 1855
Psp5II RGGWCCY 2 cut(s) 125, 575
Psp6I CCWGG 6 cut(s) 4, 112, 1296, 1543, 1669, 1895
PspFI CCCAGC 3 cut(s) 67, 979, 1174
PspGI CCWGG 6 cut(s) 4, 112, 1296, 1543, 1669, 1895
PspN4I GGNNCC 2 cut(s) 577, 1171
PspPI GGNCC 5 cut(s) 125, 575, 680, 982, 1476
PspPPI RGGWCCY 2 cut(s) 125, 575
PstNI CAGNNNCTG 1 cut(s) 128
PsuI RGATCY 1 cut(s) 673
PvuI CGATCG 1 cut(s) 236
RsaI GTAC 9 cut(s) 94, 121, 424, 860, 1059, 1343, 1721, 1851, 2018
RsaNI GTAC 9 cut(s) 93, 120, 423, 859, 1058, 1342, 1720, 1850, 2017
RseI CAYNNNNRTG 3 cut(s) 584, 1280, 1917
SapI GCTCTTC 1 cut(s) 759
SaqAI TTAA 7 cut(s) 366, 662, 693, 1649, 1761, 1827, 2190
SatI GCNGC 6 cut(s) 170, 762, 1109, 1194, 1248, 1327
Sau3AI GATC 6 cut(s) 130, 205, 233, 673, 1237, 2135
Sau96I GGNCC 5 cut(s) 125, 575, 680, 982, 1476
SchI GAGTC 5 cut(s) 109, 257, 1557, 1748, 1754
ScrFI CCNGG 8 cut(s) 6, 114, 1298, 1480, 1545, 1671, 1693, 1897
SduI GDGCHC 1 cut(s) 1260
SfaNI GCATC 5 cut(s) 614, 1654, 1966, 1987, 2146
SfcI CTRYAG 2 cut(s) 844, 1637
Sfr274I CTCGAG 1 cut(s) 881
SfuI TTCGAA 1 cut(s) 1887
SinI GGWCC 3 cut(s) 125, 575, 1476
SlaI CTCGAG 1 cut(s) 881
SmiMI CAYNNNNRTG 3 cut(s) 584, 1280, 1917
SmlI CTYRAG 7 cut(s) 217, 692, 881, 989, 1253, 1616, 1875
SmoI CTYRAG 7 cut(s) 217, 692, 881, 989, 1253, 1616, 1875
SsiI CCGC 1 cut(s) 1924
SspMI CTAG 4 cut(s) 252, 702, 809, 2141
StyD4I CCNGG 8 cut(s) 4, 112, 1296, 1478, 1543, 1669, 1691, 1895
StyI CCWWGG 1 cut(s) 384
TaaI ACNGT 7 cut(s) 845, 863, 1154, 1399, 1508, 1903, 2171
TaiI ACGT 4 cut(s) 226, 1343, 1858, 2022
TaqI TCGA 6 cut(s) 35, 232, 757, 882, 1320, 1887
TatI WGTACW 5 cut(s) 119, 422, 858, 1719, 1849
TfiI GAWTC 8 cut(s) 32, 260, 344, 356, 553, 653, 1493, 1601
Tru1I TTAA 7 cut(s) 366, 662, 693, 1649, 1761, 1827, 2190
Tru9I TTAA 7 cut(s) 366, 662, 693, 1649, 1761, 1827, 2190
TscAI CASTG 3 cut(s) 484, 504, 1398
TseFI GTSAC 1 cut(s) 210
TseI GCWGC 6 cut(s) 169, 761, 1108, 1193, 1247, 1326
Tsp45I GTSAC 1 cut(s) 210
TspDTI ATGAA 8 cut(s) 45, 369, 477, 1257, 1380, 1545, 1614, 1622
TspGWI ACGGA 2 cut(s) 1442, 1772
TspRI CASTG 3 cut(s) 484, 504, 1398
Van91I CCANNNNNTGG 3 cut(s) 143, 1303, 1436
Vha464I CTTAAG 1 cut(s) 692
VpaK11BI GGWCC 3 cut(s) 125, 575, 1476
XagI CCTNNNNNAGG 1 cut(s) 1619
XapI RAATTY 5 cut(s) 43, 938, 994, 1524, 1880
XceI RCATGY 4 cut(s) 572, 827, 955, 1729
XcmI CCANNNNNNNNNTGG 3 cut(s) 1279, 1433, 1903
XhoI CTCGAG 1 cut(s) 881
XspI CTAG 4 cut(s) 252, 702, 809, 2141
Zsp2I ATGCAT 2 cut(s) 607, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.