Rorug07G0011200

serine threonine-protein kinase HT1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
921653 .. 930769
9117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0011200.1

Sequence Viewer

Length: 3906 bp
ATGGTGTTCAAGGGGAGGTTCTTCTCCTCCAAGAAATCAGACTCCTCCAACAGTCCTGATGGCTCCACCAACAGCCCCCGATCGCTCGGCTCCAACTCCCCAAGCAGATCCGATAAGAAGAAATCCAAATCCGCCGTTAAAGACGACTCCAAAGCCGCCACTACAAGCTCCGCCGCCGTCTTTGGCGGCGGCTCTAGTCGGCAAGCGCAGGTCAAAGACGGGACGAAGAAGAAGGACGCCAAGGGGAAAGACAGTCAACAGGCGCAGCTGAAAACGCCGATCAAGTCCAGCTTAGCTGGCCTGAGTTCGACCACGACGACTCCGAAGAAGTCGGCGGCGGTGGAGCCCGCGTCGGTGTCTCCCATTCTGGCATCGTCGCTCGGTTTGAACAGGATAAAGACGAGATCGGGGCCGCTGCCGCAGGAGAGCTTTTTCGGGTTTAGGGGAGACAAAGGCTCGGCGTTGGGGTCTAGTAATTTGTCTAGGCCCGGCGCCGGTGACGGTAGTGCAGGGTTGAAGAAGAAGGAGGCGGCGGCGAGTCTGAGCAGAACGGGGTTCAATGAGAGTGTGACAAGTGGGAGCTGGGTTGATAATGGCAGTAATTCGGATGGTATGTCAACTGGTAGTGTGCCTTCCAGAGACCAAAGCCCTAACATGCCTGTGCCGCCGTCGCGGTTGCAGAATGGTGGCGAATCCTCGGCTGAAGCTGGGCGAAAGATATCATCTCGAGGTCGCTCTGGAGTCTTGAGAAGTTCAGAAGTTTGCACACCAGAGCCTGCATATGATTGTGATAATCCCAAAGAGTCTGAATCTCCCCGTTTTCAAGCTATACTGCGCTTAACGAGTGCACCAAGGAAGAGGCATCCTGCTGATATAAAAAGTTTTTCCCATGAACTAAATTCCAAAGGTGTTCGACCTTTCCCATTTTGGAAGCCTCGGGGCTTGAACAACGTGGAGGAAATATTGGTTGTGATTCGGGCTAAATTTGACAAGGCAAAGGAAGAAGTGAACTCCGATCTAGCTGTATTTGCAGCAGATTTGGTTGGTGTTCTTGAAAAAAATGCAGATACTCATCCAGACTGGCAGGAAACCATTGAGGACTTGCTGGTTTTAGCTCGAAGTTGTGCAATGACATCATCTGGAGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGATTTGGATGATAGACGTCAAGAACTTCCTCCGGGTACACTTAAGCAGCTTCACACCCGAATGCTTTTCATACTCACTAGATGTACCAGGTTGTTGCAGTTCCATAAGGAAAGTGGATTGGCCGAGGATGTACCGGTTTTCCAGCTTCGTCAATCAAGAATTCTGAATTCCGTAGATAAAAGACTTAATTCTGCAGATAAAAGAATTCCTCCAAGTTTGGTAAAGGATACAAAAAGTTCAAGTGTTACAAAGACATCTAAAGCAGCTTCAGCTAGGAAATCTTACAGTCAGGAGCAGCATAGCTTGGATTGGAAGAGAGATCATGCGGTTACACAACCTGCAATCCCCCCTCCTGCCGATCTCCCCTCGAAGAGTTTGGAATCTCCTGCTAGTAGGGACCGAATTACCTCATGGAAGAAATTCCCATCTCCAGTCGGAAAAAGCATGAAAGAAGTTTCTAAAGTAAAGGATCAGAAGGATGTTAAGGTTGAGCAGTTGAAGGCTTCAGAACACAGGAGAGTGTCTTCTGATATTGATCAGACTACTGTGAAACCTCCCGAGCCTTCTGCCAAGGATTCTCATGAACCCAAGCATGGACACAAAGCTTCTTGGGGGTGGGGATATCCTCCTAGTGGATCTGATGACACTTCTATAATTTGTCGCATTTGTGAGGACGAGGTTCCAACTTCAAATGTGGAAGACCATTCAAGAATTTGTGCAATTGCTGATCGCTGTGATCAGAAAGGTCTAAGTGTCAATGAGCGTCTTGTCAGAATATCCGAAACTCTTGAAAAGATGATGGAGTCTTTCACTCAAAAGGACATCCAGCATGGCATAGGAAGTCCAGATGTTGCAAAAATATCAAATTCGAGTGTGACTGAAGAATCCGACGGTCTCTCTCCAAAACTCAGTGATTGGTCCCATAGAGGCTCTGAGGAAATGATTGATTGTTTTCCTGAAGCTGATAATTCATCTTTCATGGATGACCTGAAGGGTTTGCCTTCCATGTCATGTAGAACTCGTTTTGGGCCCAAGTCTGATCAAGGAATGACAACATCATCTGCAGGTAGCATGACGCCTAGGTCTCCTTTATTGACACCAAAGGCCAGTCAGATTGACTTGCTCCTGGCAGGCAAGGCTTCTTTTTCTGAGCAAGATGATCTTCCTCAGATGAATGAACTTTCTGATATTGCCCGTTGCGTGGCAAATACACCTTTGGAGGATGATCGTTCCATTCCATATTTACTGTCTTGTCTTGAAGACTTGAGAATTGTTATTGACCGCAGAAAGTTCGATGCACTTACGGTGGAAACATTTGGGGCACGCATTGAGAAGCTGATCCGGGAGAAGTATTTGCAGCTTTGTGAGTTAGTGGAAGATGAAAAGGTTGATATATCAAGTACCATAATTGATGAAGATGCTCCTCTTGATGATGATGTGGTTCGTACAAGCCCGATACATTTTAACAAGGACCGAACATCTATAGACGACTTTGAAATTATTAAACCAATAAGTCGTGGGGCATTTGGACGAGTTTTCCTAGCTAAAAAGAGAACAACAGGGGATCTTTTTGCAATTAAGGTCCTTAAAAAGGCAGATATGATCCGTAAAAATGCTGTTGAAAGTATATTAGCAGAACGAGACATCTTGATATCAGTCCGCAATCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACTTGCCGCGAAAACTTGTATCTTGTGATGGAGTATCTAAATGGAGGAGATTTGTACTCGTTGTTGAGAAATTTAGGCTGCTTAGATGAGGATGTTGCTCGTGTATATATAGCTGAAGTGGTGCTTGCTTTAGAATATTTACATTCACTTTATGTGGTTCATCGTGATTTGAAGCCTGACAATTTGTTAATTGCTCACGATGGCCATGTTAAGTTGACAGACTTTGGGCTTTCAAAGGTTGGTCTCATTAACAGCACTGATGATTTATCTGGTCCAGCGGTTAGTGAGACATCCCTACTTGGGGAAGATGAAGCCGAACTATCTCTGTCTGAGCATCAGCGAGAAAGGCGAAAGAAACGGTCGGCTGTGGGTACACCTGACTATTTGGCACCGGAGATACTGTTGGGAACAGGACATGCTGCAACTGCAGATTGGTGGTCTGTTGGGGTCATTTTGTTTGAATTGATTGTTGGCATTCCACCCTTCAATGCAGAACATCCTCAGACAATTTTTGATAATATACTCAACCGAAATATACCTTGGCCTCGGGTACCTGAAGAATTGAGTCCTGAAGCAGCAGATCTGATTGATCAGTTATTGACAGAAGATCCTACTCAGAGACTTGGAGCCAGAGGAGCATCAGAGGTAAAACAGCATCCATTCTTTAAGGATATCAACTGGGATACCCTTGCCAGGCAGAAGGCTGCGTTTGTTCCATCTTCAGACAGTGCAATGGACACCAGTTACTTCACCAGTCGTTACTCATGGAATCCTTCAGATGAACATGTTTATCCAGCTAGCGATCTTGACGATTCCAGTGATGCTGATAGCTTAAGTGGCAGCAGCAGTTTAAGCAACCGTCATGATGAAGTTGTTGACGAGTGTGGAGGCCTTGCAGAGTTTGAGTCTGGCTCGTCTATCAATTACTCTTTCAGTAATTTCTCATTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTGCTTTCAAAGGGTTTTAAGGATGATCCATCATCGCATCGCAGTGCATAG

Protein Analysis

1301

Amino Acids

142.91

Weight (kDa)

5.95

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IREH1 PF26031 310 - 428 5.2e-56 IREH1-like domain
Pkinase PF00069 890 - 1179 6.8e-65 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 891 - 1037 1.7e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000430)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g34920 FvH4_3g37340 FvH4_4g12931 FvH4_4g13090 FvH4_4g13100 FvH4_6g33904 FvH4_6g39874
malus_domestica MD04G1018800.v1.1 MD04G1020000.v1.1 MD04G1020500.v1.1 MD04G1021100.v1.1
prunus_persica Prupe.1G167600_v2.0.a1 Prupe.1G167800_v2.0.a1 Prupe.1G167900_v2.0.a1 Prupe.1G168000_v2.0.a1 Prupe.1G168100_v2.0.a1 Prupe.1G169600_v2.0.a1 Prupe.1G169800_v2.0.a1 Prupe.1G169900_v2.0.a1 Prupe.1G170000_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G187600_v2.0.a1
pyrus_communis pycom04g01610 pycom04g01630 pycom04g01660
rosa_chinensis RchiOBHm_Chr3g0474061 RchiOBHm_Chr3g0474071 RchiOBHm_Chr3g0494781 RchiOBHm_Chr4g0412631 RchiOBHm_Chr4g0412831 RchiOBHm_Chr4g0412861
rosa_laevigata RLG00000008252 RLG00000008255 RLG00000008272 RLG00000023952 RLG00000026909 RLG00000026910
rosa_multiflora Rmu_co8499129.1_g000001 Rmu_sc0001755.1_g000010 Rmu_sc0001755.1_g000011 Rmu_sc0002068.1_g000006 Rmu_sc0002072.1_g000048 Rmu_sc0002878.1_g000004 Rmu_sc0003022.1_g000007 Rmu_sc0003961.1_g000002 Rmu_sc0010735.1_g000006 Rmu_sc0016141.1_g000002
rosa_roxburghii Rroxscaffold_3G00261940 Rroxscaffold_4G00285070 Rroxscaffold_5G00356800 Rroxscaffold_5G00357100 Rroxscaffold_5G00357120 Rroxscaffold_6G00407500
rosa_rugosa Rorug01G0370900 Rorug03G0138300 Rorug03G0138700 Rorug04G0117100 Rorug04G0117200 Rorug04G0117300 Rorug04G0117300 Rorug07G0011200
rosa_samantha Rh1AG379300 Rh1BG342700 Rh1BG342800 Rh1BG384500 Rh1BG384800 Rh1CG356400 Rh1CG398400 Rh1CG398800 Rh1DG374100 Rh1DG415800 Rh1DG416000 Rh3AG188500 Rh3BG217500 Rh3BG217700 Rh3CG213400 Rh3CG213600 Rh4AG174500 Rh4AG175800 Rh4AG175900 Rh4AG176000 Rh4BG176100 Rh4BG176400 Rh4CG185400 Rh4CG186900 Rh4CG187100 Rh4DG172900 Rh4DG173100 Rh7AG137700 Rh7BG138000 Rh7CG141600
rosa_wichuraiana Rw4G014620 Rw4G014750 Rw4G014760 Rw4G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2257
AatII GACGTC 1 cut(s) 1195
Acc36I ACCTGC 3 cut(s) 199, 1522, 2231
Acc65I GGTACC 1 cut(s) 3421
AccB1I GGYRCC 3 cut(s) 491, 3259, 3421
AccII CGCG 3 cut(s) 350, 673, 2880
AclWI GGATC 8 cut(s) 102, 1653, 1819, 2509, 2748, 2773, 3473, 3875
AcoI YGGCCR 2 cut(s) 1296, 3073
AcsI RAATTY 9 cut(s) 898, 983, 1335, 1342, 1380, 1595, 1887, 2041, 2941
AcyI GRCGYC 4 cut(s) 237, 492, 1192, 2252
AfaI GTAC 8 cut(s) 1213, 1261, 1308, 2578, 2623, 2927, 3244, 3423
AfiI CCNNNNNNNGG 8 cut(s) 494, 1769, 1808, 2377, 2767, 3171, 3172, 3564
AflII CTTAAG 2 cut(s) 1217, 3703
AflIII ACRYGT 1 cut(s) 3655
AgeI ACCGGT 1 cut(s) 1309
AjnI CCWGG 3 cut(s) 1262, 2301, 3563
AjuI GAANNNNNNNTTGG 4 cut(s) 3324, 3356, 3394, 3426
Alw21I GWGCWC 1 cut(s) 850
Alw26I GTCTC 9 cut(s) 363, 441, 633, 2075, 2265, 2811, 3119, 3152, 3484
Alw44I GTGCAC 1 cut(s) 846
AlwI GGATC 8 cut(s) 102, 1653, 1819, 2509, 2748, 2773, 3473, 3875
AlwNI CAGNNNCTG 1 cut(s) 776
Ama87I CYCGRG 4 cut(s) 726, 936, 1733, 3417
AoxI GGCC 9 cut(s) 298, 410, 485, 1296, 2204, 2280, 3073, 3413, 3760
ApaI GGGCCC 1 cut(s) 2208
ApaLI GTGCAC 1 cut(s) 846
ApoI RAATTY 9 cut(s) 898, 983, 1335, 1342, 1380, 1595, 1887, 2041, 2941
AsiGI ACCGGT 1 cut(s) 1309
Asp700I GAANNNNTTC 1 cut(s) 1595
Asp718I GGTACC 1 cut(s) 3421
AspA2I CCTAGG 1 cut(s) 2255
AspLEI GCGC 4 cut(s) 208, 265, 494, 837
AspS9I GGNCC 9 cut(s) 410, 486, 1573, 2094, 2204, 2205, 2647, 2758, 3143
AsuC2I CCSGG 3 cut(s) 489, 1209, 2519
AsuHPI GGTGA 2 cut(s) 509, 3613
AsuNHI GCTAGC 1 cut(s) 3668
AvaI CYCGRG 4 cut(s) 726, 936, 1733, 3417
AvaII GGWCC 5 cut(s) 1573, 2094, 2647, 2758, 3143
AvrII CCTAGG 1 cut(s) 2255
BaeGI GKGCMC 3 cut(s) 850, 2208, 2500
BalI TGGCCA 1 cut(s) 3075
BanI GGYRCC 3 cut(s) 491, 3259, 3421
BanII GRGCYC 2 cut(s) 348, 2208
BarI GAAGNNNNNNTAC 2 cut(s) 616, 648
BauI CACGAG 1 cut(s) 2970
BbsI GAAGAC 3 cut(s) 1692, 1881, 2442
Bbv12I GWGCWC 1 cut(s) 850
BccI CCATC 8 cut(s) 53, 602, 1609, 1969, 2893, 3065, 3595, 3892
BceAI ACGGC 3 cut(s) 119, 161, 652
BcgI CGANNNNNNTGC 4 cut(s) 1724, 1758, 2449, 2483
BciT130I CCWGG 3 cut(s) 1264, 2303, 3565
BciVI GTATCC 2 cut(s) 1396, 3547
BclI TGATCA 4 cut(s) 1711, 1912, 2215, 3460
BcnI CCSGG 3 cut(s) 489, 1209, 2519
BcoDI GTCTC 9 cut(s) 363, 441, 633, 2075, 2265, 2811, 3119, 3152, 3484
BfmI CTRYAG 4 cut(s) 1368, 2238, 2658, 3297
BfoI RGCGCY 1 cut(s) 495
BfrI CTTAAG 2 cut(s) 1217, 3703
BfuAI ACCTGC 3 cut(s) 199, 1522, 2231
BfuI GTATCC 2 cut(s) 1396, 3547
BglII AGATCT 1 cut(s) 3451
BlnI CCTAGG 1 cut(s) 2255
BlpI GCTNAGC 1 cut(s) 292
Bme1390I CCNGG 6 cut(s) 489, 1209, 1264, 2303, 2519, 3565
Bme18I GGWCC 5 cut(s) 1573, 2094, 2647, 2758, 3143
BmeT110I CYCGRG 4 cut(s) 726, 936, 1733, 3417
BmgT120I GGNCC 9 cut(s) 410, 486, 1573, 2094, 2204, 2205, 2647, 2758, 3143
BmrFI CCNGG 6 cut(s) 489, 1209, 1264, 2303, 2519, 3565
BmrI ACTGGG 1 cut(s) 3559
BmtI GCTAGC 1 cut(s) 3672
BmuI ACTGGG 1 cut(s) 3559
BpiI GAAGAC 3 cut(s) 1692, 1881, 2442
BplI GAGNNNNNCTC 2 cut(s) 3767, 3799
BpmI CTGGAG 3 cut(s) 759, 1161, 1590
Bpu1102I GCTNAGC 1 cut(s) 292
BpuEI CTTGAG 2 cut(s) 766, 2461
BpuMI CCSGG 3 cut(s) 489, 1209, 2519
BsaBI GATNNNNATC 2 cut(s) 1071, 1710
BsaHI GRCGYC 4 cut(s) 237, 492, 1192, 2252
BsaI GGTCTC 4 cut(s) 633, 2075, 2265, 3119
BsaJI CCNNGG 9 cut(s) 240, 696, 851, 935, 1299, 1746, 2255, 3410, 3416
BsaWI WCCGGW 2 cut(s) 1309, 3262
BsaXI ACNNNNNCTCC 6 cut(s) 304, 334, 335, 365, 3257, 3287
Bsc4I CCNNNNNNNGG 8 cut(s) 494, 1769, 1808, 2377, 2767, 3171, 3172, 3564
Bse118I RCCGGY 2 cut(s) 494, 1309
Bse1I ACTGG 8 cut(s) 625, 1085, 1607, 2283, 3554, 3612, 3624, 3687
Bse3DI GCAATG 2 cut(s) 1134, 3609
Bse8I GATNNNNATC 2 cut(s) 1071, 1710
BseBI CCWGG 3 cut(s) 1264, 2303, 3565
BseDI CCNNGG 9 cut(s) 240, 696, 851, 935, 1299, 1746, 2255, 3410, 3416
BseJI GATNNNNATC 2 cut(s) 1071, 1710
BseLI CCNNNNNNNGG 8 cut(s) 494, 1769, 1808, 2377, 2767, 3171, 3172, 3564
BseMI GCAATG 2 cut(s) 1134, 3609
BseMII CTCAG 9 cut(s) 293, 533, 2098, 2100, 2316, 2357, 3192, 3386, 3500
BseNI ACTGG 8 cut(s) 625, 1085, 1607, 2283, 3554, 3612, 3624, 3687
BseRI GAGGAG 5 cut(s) 16, 34, 2589, 2931, 3519
BseSI GKGCMC 3 cut(s) 850, 2208, 2500
BseYI CCCAGC 3 cut(s) 582, 707, 3831
BsgI GTGCAG 1 cut(s) 528
Bsh1236I CGCG 3 cut(s) 350, 673, 2880
Bsh1285I CGRYCG 2 cut(s) 83, 3233
BshFI GGCC 9 cut(s) 300, 412, 487, 1298, 2206, 2282, 3075, 3415, 3762
BshNI GGYRCC 3 cut(s) 491, 3259, 3421
BshTI ACCGGT 1 cut(s) 1309
BsiEI CGRYCG 2 cut(s) 83, 3233
BsiHKAI GWGCWC 1 cut(s) 850
BsiHKCI CYCGRG 4 cut(s) 726, 936, 1733, 3417
BsiSI CCGG 6 cut(s) 489, 495, 1208, 1310, 2518, 3263
BslFI GGGAC 3 cut(s) 235, 1586, 2080
BslI CCNNNNNNNGG 8 cut(s) 494, 1769, 1808, 2377, 2767, 3171, 3172, 3564
BsmAI GTCTC 9 cut(s) 363, 441, 633, 2075, 2265, 2811, 3119, 3152, 3484
BsmFI GGGAC 3 cut(s) 235, 1586, 2080
BsmI GAATGC 2 cut(s) 1242, 3345
BsnI GGCC 9 cut(s) 300, 412, 487, 1298, 2206, 2282, 3075, 3415, 3762
Bso31I GGTCTC 4 cut(s) 633, 2075, 2265, 3119
BsoBI CYCGRG 4 cut(s) 726, 936, 1733, 3417
Bsp120I GGGCCC 1 cut(s) 2204
Bsp1286I GDGCHC 4 cut(s) 348, 850, 2208, 2500
Bsp1720I GCTNAGC 1 cut(s) 292
BspANI GGCC 9 cut(s) 300, 412, 487, 1298, 2206, 2282, 3075, 3415, 3762
BspCNI CTCAG 9 cut(s) 294, 534, 2097, 2101, 2317, 2356, 3193, 3385, 3499
BspFNI CGCG 3 cut(s) 350, 673, 2880
BspHI TCATGA 2 cut(s) 1756, 3733
BspMAI CTGCAG 3 cut(s) 1372, 2242, 3301
BspMI ACCTGC 3 cut(s) 199, 1522, 2231
BspOI GCTAGC 1 cut(s) 3672
BspPI GGATC 8 cut(s) 102, 1653, 1819, 2509, 2748, 2773, 3473, 3875
BspT107I GGYRCC 3 cut(s) 491, 3259, 3421
BspTI CTTAAG 2 cut(s) 1217, 3703
BspTNI GGTCTC 4 cut(s) 633, 2075, 2265, 3119
BsrDI GCAATG 2 cut(s) 1134, 3609
BsrFI RCCGGY 2 cut(s) 494, 1309
BsrI ACTGG 8 cut(s) 625, 1085, 1607, 2283, 3554, 3612, 3624, 3687
BssAI RCCGGY 2 cut(s) 494, 1309
BssECI CCNNGG 9 cut(s) 240, 696, 851, 935, 1299, 1746, 2255, 3410, 3416
BssNI GRCGYC 4 cut(s) 237, 492, 1192, 2252
BssSI CACGAG 1 cut(s) 2970
BssT1I CCWWGG 5 cut(s) 240, 851, 1746, 2255, 3410
Bst2BI CACGAG 1 cut(s) 2970
Bst2UI CCWGG 3 cut(s) 1264, 2303, 3565
Bst6I CTCTTC 3 cut(s) 851, 1484, 1541
BstACI GRCGYC 4 cut(s) 237, 492, 1192, 2252
BstAFI CTTAAG 2 cut(s) 1217, 3703
BstC8I GCNNGC 9 cut(s) 204, 298, 348, 777, 2308, 2500, 2997, 3670, 3837
BstENI CCTNNNNNAGG 1 cut(s) 2765
BstFNI CGCG 3 cut(s) 350, 673, 2880
BstH2I RGCGCY 1 cut(s) 495
BstHHI GCGC 4 cut(s) 208, 265, 494, 837
BstMAI GTCTC 9 cut(s) 363, 441, 633, 2075, 2265, 2811, 3119, 3152, 3484
BstMCI CGRYCG 2 cut(s) 83, 3233
BstNI CCWGG 3 cut(s) 1264, 2303, 3565
BstNSI RCATGY 3 cut(s) 658, 3290, 3659
BstSCI CCNGG 6 cut(s) 487, 1207, 1262, 2301, 2517, 3563
BstSFI CTRYAG 4 cut(s) 1368, 2238, 2658, 3297
BstSLI GKGCMC 3 cut(s) 850, 2208, 2500
BstUI CGCG 3 cut(s) 350, 673, 2880
BstV2I GAAGAC 3 cut(s) 1692, 1881, 2442
BstX2I RGATCY 5 cut(s) 107, 1811, 2740, 3451, 3478
BstYI RGATCY 5 cut(s) 107, 1811, 2740, 3451, 3478
BsuI GTATCC 2 cut(s) 1396, 3547
BsuRI GGCC 9 cut(s) 300, 412, 487, 1298, 2206, 2282, 3075, 3415, 3762
BtgZI GCGATG 2 cut(s) 3873, 3878
BtsI GCAGTG 1 cut(s) 3904
BtsIMutI CAGTG 6 cut(s) 1163, 2092, 3126, 3604, 3694, 3904
BveI ACCTGC 3 cut(s) 199, 1522, 2231
Cac8I GCNNGC 9 cut(s) 204, 298, 348, 777, 2308, 2500, 2997, 3670, 3837
CaiI CAGNNNCTG 1 cut(s) 776
CciI TCATGA 2 cut(s) 1756, 3733
CfoI GCGC 4 cut(s) 208, 265, 494, 837
Cfr10I RCCGGY 2 cut(s) 494, 1309
Cfr13I GGNCC 9 cut(s) 410, 486, 1573, 2094, 2204, 2205, 2647, 2758, 3143
CseI GACGC 4 cut(s) 245, 339, 1928, 2260
CsiI ACCWGGT 1 cut(s) 1262
Csp6I GTAC 8 cut(s) 1212, 1260, 1307, 2577, 2622, 2926, 3243, 3422
CspAI ACCGGT 1 cut(s) 1309
CviQI GTAC 8 cut(s) 1212, 1260, 1307, 2577, 2622, 2926, 3243, 3422
DinI GGCGCC 1 cut(s) 493
DrdI GACNNNNNNGTC 1 cut(s) 2257
DseDI GACNNNNNNGTC 1 cut(s) 2257
EaeI YGGCCR 2 cut(s) 1296, 3073
Eam1104I CTCTTC 3 cut(s) 851, 1484, 1541
EarI CTCTTC 3 cut(s) 851, 1484, 1541
EciI GGCGGA 2 cut(s) 121, 160
Eco130I CCWWGG 5 cut(s) 240, 851, 1746, 2255, 3410
Eco147I AGGCCT 1 cut(s) 3762
Eco24I GRGCYC 2 cut(s) 348, 2208
Eco31I GGTCTC 4 cut(s) 633, 2075, 2265, 3119
Eco32I GATATC 4 cut(s) 720, 1799, 2829, 3544
Eco47I GGWCC 5 cut(s) 1573, 2094, 2647, 2758, 3143
Eco88I CYCGRG 4 cut(s) 726, 936, 1733, 3417
EcoNI CCTNNNNNAGG 1 cut(s) 2765
EcoO109I RGGNCCY 1 cut(s) 2758
EcoRI GAATTC 3 cut(s) 1335, 1342, 1380
EcoRII CCWGG 3 cut(s) 1262, 2301, 3563
EcoRV GATATC 4 cut(s) 720, 1799, 2829, 3544
EcoT14I CCWWGG 5 cut(s) 240, 851, 1746, 2255, 3410
EcoT38I GRGCYC 2 cut(s) 348, 2208
EgeI GGCGCC 1 cut(s) 493
EheI GGCGCC 1 cut(s) 493
ErhI CCWWGG 5 cut(s) 240, 851, 1746, 2255, 3410
FalI AAGNNNNNCTT 6 cut(s) 275, 307, 2322, 2354, 2979, 3011
FaqI GGGAC 3 cut(s) 235, 1586, 2080
FauI CCCGC 1 cut(s) 355
FauNDI CATATG 1 cut(s) 781
FbaI TGATCA 4 cut(s) 1711, 1912, 2215, 3460
FriOI GRGCYC 2 cut(s) 348, 2208
GlaI GCGC 4 cut(s) 207, 264, 493, 836
GsaI CCCAGC 3 cut(s) 586, 711, 3835
GsuI CTGGAG 3 cut(s) 759, 1161, 1590
HaeII RGCGCY 1 cut(s) 495
HaeIII GGCC 9 cut(s) 300, 412, 487, 1298, 2206, 2282, 3075, 3415, 3762
HapII CCGG 6 cut(s) 489, 495, 1208, 1310, 2518, 3263
HgaI GACGC 4 cut(s) 245, 339, 1928, 2260
HhaI GCGC 4 cut(s) 208, 265, 494, 837
Hin1I GRCGYC 4 cut(s) 237, 492, 1192, 2252
Hin6I GCGC 4 cut(s) 206, 263, 492, 835
HinP1I GCGC 4 cut(s) 206, 263, 492, 835
HincII GTYRAC 4 cut(s) 257, 618, 3087, 3748
HindII GTYRAC 4 cut(s) 257, 618, 3087, 3748
HindIII AAGCTT 1 cut(s) 1779
HpaII CCGG 6 cut(s) 489, 495, 1208, 1310, 2518, 3263
HphI GGTGA 2 cut(s) 509, 3613
Hpy166II GTNNAC 8 cut(s) 257, 618, 848, 1009, 1214, 3087, 3245, 3748
Hpy8I GTNNAC 8 cut(s) 257, 618, 848, 1009, 1214, 3087, 3245, 3748
Hpy99I CGWCG 5 cut(s) 319, 355, 379, 673, 2069
HpyCH4IV ACGT 2 cut(s) 951, 1192
HpySE526I ACGT 2 cut(s) 951, 1192
Hsp92I GRCGYC 4 cut(s) 237, 492, 1192, 2252
HspAI GCGC 4 cut(s) 206, 263, 492, 835
KasI GGCGCC 1 cut(s) 491
KpnI GGTACC 1 cut(s) 3425
Ksp22I TGATCA 4 cut(s) 1711, 1912, 2215, 3460
MabI ACCWGGT 1 cut(s) 1262
MaeII ACGT 2 cut(s) 951, 1192
MaeIII GTNAC 7 cut(s) 497, 568, 1420, 1504, 2050, 3614, 3629
MfeI CAATTG 1 cut(s) 1896
MflI RGATCY 5 cut(s) 107, 1811, 2740, 3451, 3478
MhlI GDGCHC 4 cut(s) 348, 850, 2208, 2500
MlsI TGGCCA 1 cut(s) 3075
MluNI TGGCCA 1 cut(s) 3075
Mly113I GGCGCC 1 cut(s) 492
MlyI GAGTC 9 cut(s) 35, 140, 313, 547, 750, 812, 1988, 3445, 3785
MmeI TCCRAC 5 cut(s) 72, 117, 1591, 1883, 2088
Mox20I TGGCCA 1 cut(s) 3075
MroXI GAANNNNTTC 1 cut(s) 1595
MscI TGGCCA 1 cut(s) 3075
MslI CAYNNNNRTG 3 cut(s) 659, 1235, 3897
Msp20I TGGCCA 1 cut(s) 3075
MspA1I CMGCKG 3 cut(s) 268, 415, 3149
MspCI CTTAAG 2 cut(s) 1217, 3703
MspI CCGG 6 cut(s) 489, 495, 1208, 1310, 2518, 3263
MspR9I CCNGG 6 cut(s) 489, 1209, 1264, 2303, 2519, 3565
MunI CAATTG 1 cut(s) 1896
Mva1269I GAATGC 2 cut(s) 1242, 3345
MvaI CCWGG 3 cut(s) 1264, 2303, 3565
MvnI CGCG 3 cut(s) 350, 673, 2880
NarI GGCGCC 1 cut(s) 492
NciI CCSGG 3 cut(s) 489, 1209, 2519
NdeI CATATG 1 cut(s) 781
NheI GCTAGC 1 cut(s) 3668
NmeAIII GCCGAG 4 cut(s) 66, 437, 677, 1324
NmuCI GTSAC 3 cut(s) 497, 568, 2050
NspI RCATGY 3 cut(s) 658, 3290, 3659
PaeR7I CTCGAG 1 cut(s) 726
PagI TCATGA 2 cut(s) 1756, 3733
PceI AGGCCT 1 cut(s) 3762
PciI ACATGT 1 cut(s) 3655
PcsI WCGNNNNNNNCGW 2 cut(s) 314, 320
PctI GAATGC 2 cut(s) 1242, 3345
PdmI GAANNNNTTC 1 cut(s) 1595
PfeI GAWTC 9 cut(s) 692, 809, 973, 1556, 1751, 2060, 3640, 3683, 3823
PfoI TCCNGGA 1 cut(s) 2517
PinAI ACCGGT 1 cut(s) 1309
Ple19I CGATCG 1 cut(s) 83
PleI GAGTC 9 cut(s) 35, 140, 313, 546, 749, 811, 1987, 3444, 3784
PluTI GGCGCC 1 cut(s) 495
PpsI GAGTC 9 cut(s) 35, 140, 313, 546, 749, 811, 1987, 3444, 3784
PpuMI RGGWCCY 1 cut(s) 2758
PscI ACATGT 1 cut(s) 3655
Psp5II RGGWCCY 1 cut(s) 2758
Psp6I CCWGG 3 cut(s) 1262, 2301, 3563
PspFI CCCAGC 3 cut(s) 582, 707, 3831
PspGI CCWGG 3 cut(s) 1262, 2301, 3563
PspOMI GGGCCC 1 cut(s) 2204
PspPI GGNCC 9 cut(s) 410, 486, 1573, 2094, 2204, 2205, 2647, 2758, 3143
PspPPI RGGWCCY 1 cut(s) 2758
PstI CTGCAG 3 cut(s) 1372, 2242, 3301
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 5 cut(s) 107, 1811, 2740, 3451, 3478
PvuI CGATCG 1 cut(s) 83
PvuII CAGCTG 1 cut(s) 268
RsaI GTAC 8 cut(s) 1213, 1261, 1308, 2578, 2623, 2927, 3244, 3423
RsaNI GTAC 8 cut(s) 1212, 1260, 1307, 2577, 2622, 2926, 3243, 3422
RseI CAYNNNNRTG 3 cut(s) 659, 1235, 3897
Sau96I GGNCC 9 cut(s) 410, 486, 1573, 2094, 2204, 2205, 2647, 2758, 3143
SchI GAGTC 9 cut(s) 35, 140, 313, 547, 750, 812, 1988, 3445, 3785
ScrFI CCNGG 6 cut(s) 489, 1209, 1264, 2303, 2519, 3565
SduI GDGCHC 4 cut(s) 348, 850, 2208, 2500
SexAI ACCWGGT 1 cut(s) 1262
SfcI CTRYAG 4 cut(s) 1368, 2238, 2658, 3297
SfoI GGCGCC 1 cut(s) 493
Sfr274I CTCGAG 1 cut(s) 726
SgrAI CRCCGGYG 1 cut(s) 494
SinI GGWCC 5 cut(s) 1573, 2094, 2647, 2758, 3143
SlaI CTCGAG 1 cut(s) 726
SmiMI CAYNNNNRTG 3 cut(s) 659, 1235, 3897
SmlI CTYRAG 5 cut(s) 726, 745, 1217, 2440, 3703
SmoI CTYRAG 5 cut(s) 726, 745, 1217, 2440, 3703
SseBI AGGCCT 1 cut(s) 3762
SspDI GGCGCC 1 cut(s) 491
SspI AATATT 2 cut(s) 963, 3008
StuI AGGCCT 1 cut(s) 3762
StyD4I CCNGG 6 cut(s) 487, 1207, 1262, 2301, 2517, 3563
StyI CCWWGG 5 cut(s) 240, 851, 1746, 2255, 3410
TaiI ACGT 2 cut(s) 954, 1195
TaqI TCGA 7 cut(s) 308, 727, 913, 1117, 1544, 2045, 2469
TaqII GACCGA 2 cut(s) 1590, 2664
TatI WGTACW 1 cut(s) 2925
TfiI GAWTC 9 cut(s) 692, 809, 973, 1556, 1751, 2060, 3640, 3683, 3823
TscAI CASTG 6 cut(s) 1163, 2092, 3133, 3604, 3694, 3904
TseFI GTSAC 3 cut(s) 497, 568, 2050
Tsp45I GTSAC 3 cut(s) 497, 568, 2050
TspGWI ACGGA 2 cut(s) 1336, 2771
TspRI CASTG 6 cut(s) 1163, 2092, 3133, 3604, 3694, 3904
Vha464I CTTAAG 2 cut(s) 1217, 3703
VneI GTGCAC 1 cut(s) 846
VpaK11BI GGWCC 5 cut(s) 1573, 2094, 2647, 2758, 3143
XagI CCTNNNNNAGG 1 cut(s) 2765
XapI RAATTY 9 cut(s) 898, 983, 1335, 1342, 1380, 1595, 1887, 2041, 2941
XceI RCATGY 3 cut(s) 658, 3290, 3659
XcmI CCANNNNNNNNNTGG 1 cut(s) 1286
XhoI CTCGAG 1 cut(s) 726
XmaJI CCTAGG 1 cut(s) 2255
XmnI GAANNNNTTC 1 cut(s) 1595
ZraI GACGTC 1 cut(s) 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.