Rorug04G0117200

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000430
Physical Location & Seq
Forward (+)
18508840 .. 18510628
1789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0117200.1

Sequence Viewer

Length: 1494 bp
ATGGCAGCTATTAGTCGTAGCTCCTCGTCCTCTTCCACCCCCATTATGAGGTATTTCACCGGTTTGTCTCTAATTCTAAGCCTGACTCTGTGTTCTTTGGACAAGGGCTTTGCCTTAGCAGAAGGAGATTCAAAAGAACGTCTCCTTCATCATCAATACACCCACACAGTTGATCTCCGCTCTCTACTGCCAGCAACCACCTGCAGCCCCTCCACCAGAGGTAATAAAAGGATGGCATCTCTTGAAGTGGTACACAAGCATGGGCCATGCTCTCATCTTCCTCAACTCAAAGCGACTGCTATGAATCACACTCTAATTCTCGAGCAAGACCAAACGCGAGTCAACTCAATCAACTCCCGGATTTCCAAGAAATTGAACGGCAATGAGGATCTAAGCCAATTGGAGGCCACCACCGTTCCGGCCCGGTGGGCAAGCAGCCAAAATGCAGGCAACTACATGGTGACGGTGGGATTGGGCACACCTAAAAAACAACTTTCACTCGTATTTGACACCGGAAGCGACCTCACTTGGACTCAATGCCAACCTTGTTCTGAATCTTGCTACCCACAAGAGGAGCCCATTTTCGATCCCTCGGCCTCTTCCTCATATACCAACGTTTCCTGTAACAGCACAGAGTGCGTCCAACTCAGGACATCTACGGAATCTGACAAATGCTTAGGAGACACATGCCCATATTCCGTGACGTACGGAGACTCATCTTACACCACTGGATATTTCGCCACAGACAAGCTGACCTTAACTCCTAACGACGTGTTCGATGGGTTCTTCTTCGGCTGCGGCCAAGAAAACGTAGGTTTCCACGACGGCTCGGCCGGTTTACTTGGTCTCTCCCTCAACAAGTTCTCCATCGTCGAACAAACCGCACAAAAGTACAGCCGCTTCTTCTCCTACTGTCTGCCACCAACCGCAAGCTCCACCGGTTACCTCAGCTTCGGCGCACCCAGTGGAGCTTCCAATGCTGCCGTCAAATACACGCGAATCACTAACTTATCCTCGAGCTTAGAGCTTTACTGCCTAGACCTGGTTGGAATCAATGTGAATGGACAAAAGCTCTCAATTCCTGCTTCGGTGTTTTCGTCGCCAGGGACGATCATCGACTCCGGGACCGTCATATCGCGACTGCCGCCCACCGCGTATACCGCTTTGCGGGACGTGTTTCGGGCAGCGATGATAAGCTATCCGTTAGTTCCGGGGCCGGAAAAGCTCCTAGATACATGCTACGACCTTAGTGGCTATCCAACGGTGACGTATCCGAAAATAGAATTTGTGTTCGGCGACGGGGTTACGTTGGAATTGGACGCAACCGGCATTGTCTACCTTTTCAACGGTTCGAATAAGCAGGTTTGCTTGGCTTTTGCTGGGAATGATGATGCTAACGACATTGCGATTTTCGGGAATACTCAGCAGAAGAATATGGAGGTGTTGTATGACGTTGCCGGAGGGAGAGTTGGATTTGCTCCCGGCGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

497

Amino Acids

53.44

Weight (kDa)

5.43

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 151 - 494 2.2e-23 Eukaryotic aspartyl protease
TAXi_N PF14543 152 - 319 3.9e-52 Xylanase inhibitor N-terminal
TAXi_C PF14541 344 - 493 4.4e-27 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000430)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g34920 FvH4_3g37340 FvH4_4g12931 FvH4_4g13090 FvH4_4g13100 FvH4_6g33904 FvH4_6g39874
malus_domestica MD04G1018800.v1.1 MD04G1020000.v1.1 MD04G1020500.v1.1 MD04G1021100.v1.1
prunus_persica Prupe.1G167600_v2.0.a1 Prupe.1G167800_v2.0.a1 Prupe.1G167900_v2.0.a1 Prupe.1G168000_v2.0.a1 Prupe.1G168100_v2.0.a1 Prupe.1G169600_v2.0.a1 Prupe.1G169800_v2.0.a1 Prupe.1G169900_v2.0.a1 Prupe.1G170000_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G187600_v2.0.a1
pyrus_communis pycom04g01610 pycom04g01630 pycom04g01660
rosa_chinensis RchiOBHm_Chr3g0474061 RchiOBHm_Chr3g0474071 RchiOBHm_Chr3g0494781 RchiOBHm_Chr4g0412631 RchiOBHm_Chr4g0412831 RchiOBHm_Chr4g0412861
rosa_laevigata RLG00000008252 RLG00000008255 RLG00000008272 RLG00000023952 RLG00000026909 RLG00000026910
rosa_multiflora Rmu_co8499129.1_g000001 Rmu_sc0001755.1_g000010 Rmu_sc0001755.1_g000011 Rmu_sc0002068.1_g000006 Rmu_sc0002072.1_g000048 Rmu_sc0002878.1_g000004 Rmu_sc0003022.1_g000007 Rmu_sc0003961.1_g000002 Rmu_sc0010735.1_g000006 Rmu_sc0016141.1_g000002
rosa_roxburghii Rroxscaffold_3G00261940 Rroxscaffold_4G00285070 Rroxscaffold_5G00356800 Rroxscaffold_5G00357100 Rroxscaffold_5G00357120 Rroxscaffold_6G00407500
rosa_rugosa Rorug01G0370900 Rorug03G0138300 Rorug03G0138700 Rorug04G0117100 Rorug04G0117200 Rorug04G0117300 Rorug04G0117300 Rorug07G0011200
rosa_samantha Rh1AG379300 Rh1BG342700 Rh1BG342800 Rh1BG384500 Rh1BG384800 Rh1CG356400 Rh1CG398400 Rh1CG398800 Rh1DG374100 Rh1DG415800 Rh1DG416000 Rh3AG188500 Rh3BG217500 Rh3BG217700 Rh3CG213400 Rh3CG213600 Rh4AG174500 Rh4AG175800 Rh4AG175900 Rh4AG176000 Rh4BG176100 Rh4BG176400 Rh4CG185400 Rh4CG186900 Rh4CG187100 Rh4DG172900 Rh4DG173100 Rh7AG137700 Rh7BG138000 Rh7CG141600
rosa_wichuraiana Rw4G014620 Rw4G014750 Rw4G014760 Rw4G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 209
Acc36I ACCTGC 2 cut(s) 209, 1351
AccBSI CCGCTC 1 cut(s) 180
AccI GTMKAC 2 cut(s) 1157, 1335
AccII CGCG 4 cut(s) 337, 997, 1138, 1154
AclI AACGTT 1 cut(s) 615
AclWI GGATC 2 cut(s) 396, 581
AcoI YGGCCR 2 cut(s) 799, 831
AcsI RAATTY 1 cut(s) 1283
AdeI CACNNNGTG 2 cut(s) 636, 965
AfaI GTAC 3 cut(s) 252, 707, 893
AfiI CCNNNNNNNGG 5 cut(s) 48, 403, 571, 1042, 1167
AflIII ACRYGT 2 cut(s) 771, 1173
AgeI ACCGGT 2 cut(s) 59, 938
AgsI TTSAA 4 cut(s) 132, 245, 376, 1345
AjiI CACGTC 2 cut(s) 772, 1174
AjnI CCWGG 2 cut(s) 1041, 1102
Alw26I GTCTC 5 cut(s) 72, 146, 675, 705, 851
AlwI GGATC 2 cut(s) 396, 581
Ama87I CYCGRG 2 cut(s) 320, 1015
AoxI GGCC 7 cut(s) 263, 405, 420, 594, 799, 831, 1214
ApeKI GCWGC 6 cut(s) 5, 204, 435, 795, 980, 1184
ApoI RAATTY 1 cut(s) 1283
ArsI GACNNNNNNTTYG 2 cut(s) 92, 124
AsiGI ACCGGT 2 cut(s) 59, 938
AspLEI GCGC 1 cut(s) 959
AspS9I GGNCC 4 cut(s) 263, 421, 1125, 1214
AsuC2I CCSGG 5 cut(s) 358, 424, 1123, 1212, 1482
AsuHPI GGTGA 3 cut(s) 49, 472, 1276
AsuII TTCGAA 1 cut(s) 1352
AvaI CYCGRG 2 cut(s) 320, 1015
AvaII GGWCC 1 cut(s) 1125
BaeGI GKGCMC 1 cut(s) 479
BanII GRGCYC 1 cut(s) 579
BarI GAAGNNNNNNTAC 2 cut(s) 884, 916
BbvCI CCTCAGC 1 cut(s) 947
BbvI GCAGC 6 cut(s) 17, 216, 447, 782, 967, 1196
BccI CCATC 3 cut(s) 226, 773, 875
BceAI ACGGC 3 cut(s) 394, 841, 968
BciT130I CCWGG 2 cut(s) 1043, 1104
BciVI GTATCC 1 cut(s) 1281
BcnI CCSGG 5 cut(s) 358, 424, 1123, 1212, 1482
BcoDI GTCTC 5 cut(s) 72, 146, 675, 705, 851
BfaI CTAG 2 cut(s) 1037, 1229
BfmI CTRYAG 1 cut(s) 202
BfuAI ACCTGC 2 cut(s) 209, 1351
BfuI GTATCC 1 cut(s) 1281
BglI GCCNNNNNGGC 1 cut(s) 428
BisI GCNGC 9 cut(s) 6, 205, 436, 796, 799, 898, 981, 1145, 1185
BlsI GCNGC 9 cut(s) 7, 206, 437, 797, 800, 899, 982, 1146, 1186
Bme1390I CCNGG 7 cut(s) 358, 424, 1043, 1104, 1123, 1212, 1482
Bme18I GGWCC 1 cut(s) 1125
BmeT110I CYCGRG 2 cut(s) 320, 1015
BmgBI CACGTC 2 cut(s) 772, 1174
BmgT120I GGNCC 4 cut(s) 263, 421, 1125, 1214
BmiI GGNNCC 3 cut(s) 576, 1126, 1215
BmrFI CCNGG 7 cut(s) 358, 424, 1043, 1104, 1123, 1212, 1482
BmrI ACTGGG 1 cut(s) 957
BmsI GCATC 2 cut(s) 245, 1381
BmuI ACTGGG 1 cut(s) 957
Bpu10I CCTNAGC 3 cut(s) 115, 676, 947
Bpu14I TTCGAA 1 cut(s) 1352
BpuMI CCSGG 5 cut(s) 358, 424, 1123, 1212, 1482
BsaI GGTCTC 1 cut(s) 851
BsaJI CCNNGG 3 cut(s) 591, 1103, 1211
BsaWI WCCGGW 3 cut(s) 59, 512, 938
BsaXI ACNNNNNCTCC 8 cut(s) 745, 775, 848, 878, 1430, 1452, 1460, 1482
Bsc4I CCNNNNNNNGG 5 cut(s) 48, 403, 571, 1042, 1167
Bse118I RCCGGY 4 cut(s) 59, 833, 938, 1325
Bse1I ACTGG 2 cut(s) 733, 963
Bse3DI GCAATG 2 cut(s) 388, 1401
BseBI CCWGG 2 cut(s) 1043, 1104
BseDI CCNNGG 3 cut(s) 591, 1103, 1211
BseGI GGATG 1 cut(s) 237
BseLI CCNNNNNNNGG 5 cut(s) 48, 403, 571, 1042, 1167
BseMI GCAATG 2 cut(s) 388, 1401
BseMII CTCAG 3 cut(s) 661, 961, 1436
BseNI ACTGG 2 cut(s) 733, 963
BseRI GAGGAG 2 cut(s) 13, 587
BseSI GKGCMC 1 cut(s) 479
BseX3I CGGCCG 1 cut(s) 831
BseXI GCAGC 6 cut(s) 17, 216, 447, 782, 967, 1196
BseYI CCCAGC 1 cut(s) 1379
Bsh1236I CGCG 4 cut(s) 337, 997, 1138, 1154
Bsh1285I CGRYCG 1 cut(s) 834
BshFI GGCC 7 cut(s) 265, 407, 422, 596, 801, 833, 1216
BshTI ACCGGT 2 cut(s) 59, 938
BsiEI CGRYCG 1 cut(s) 834
BsiHKCI CYCGRG 2 cut(s) 320, 1015
BsiWI CGTACG 1 cut(s) 705
BslFI GGGAC 3 cut(s) 1120, 1138, 1184
BslI CCNNNNNNNGG 5 cut(s) 48, 403, 571, 1042, 1167
BsmAI GTCTC 5 cut(s) 72, 146, 675, 705, 851
BsmBI CGTCTC 1 cut(s) 146
BsmFI GGGAC 3 cut(s) 1120, 1138, 1184
BsnI GGCC 7 cut(s) 265, 407, 422, 596, 801, 833, 1216
Bso31I GGTCTC 1 cut(s) 851
BsoBI CYCGRG 2 cut(s) 320, 1015
Bsp119I TTCGAA 1 cut(s) 1352
Bsp1286I GDGCHC 2 cut(s) 479, 579
Bsp143I GATC 4 cut(s) 172, 388, 586, 1110
Bsp68I TCGCGA 1 cut(s) 1138
BspANI GGCC 7 cut(s) 265, 407, 422, 596, 801, 833, 1216
BspCNI CTCAG 3 cut(s) 660, 960, 1435
BspFNI CGCG 4 cut(s) 337, 997, 1138, 1154
BspLI GGNNCC 3 cut(s) 576, 1126, 1215
BspMAI CTGCAG 1 cut(s) 206
BspMI ACCTGC 2 cut(s) 209, 1351
BspPI GGATC 2 cut(s) 396, 581
BspT104I TTCGAA 1 cut(s) 1352
BspTNI GGTCTC 1 cut(s) 851
BsrBI CCGCTC 1 cut(s) 180
BsrDI GCAATG 2 cut(s) 388, 1401
BsrFI RCCGGY 4 cut(s) 59, 833, 938, 1325
BsrI ACTGG 2 cut(s) 733, 963
BssAI RCCGGY 4 cut(s) 59, 833, 938, 1325
BssECI CCNNGG 3 cut(s) 591, 1103, 1211
BssMI GATC 4 cut(s) 172, 388, 586, 1110
BssNAI GTATAC 1 cut(s) 1158
Bst1107I GTATAC 1 cut(s) 1158
Bst2UI CCWGG 2 cut(s) 1043, 1104
Bst4CI ACNGT 7 cut(s) 169, 415, 466, 914, 1129, 1264, 1349
Bst6I CTCTTC 2 cut(s) 37, 604
BstAPI GCANNNNNTGC 1 cut(s) 636
BstBI TTCGAA 1 cut(s) 1352
BstC8I GCNNGC 4 cut(s) 192, 433, 448, 931
BstDEI CTNAG 9 cut(s) 77, 115, 392, 647, 676, 947, 1021, 1247, 1422
BstEII GGTNACC 1 cut(s) 941
BstF5I GGATG 1 cut(s) 237
BstFNI CGCG 4 cut(s) 337, 997, 1138, 1154
BstHHI GCGC 1 cut(s) 959
BstKTI GATC 4 cut(s) 175, 391, 589, 1113
BstMAI GTCTC 5 cut(s) 72, 146, 675, 705, 851
BstMBI GATC 4 cut(s) 172, 388, 586, 1110
BstMCI CGRYCG 1 cut(s) 834
BstMWI GCNNNNNNNGC 6 cut(s) 428, 636, 977, 1144, 1160, 1222
BstNI CCWGG 2 cut(s) 1043, 1104
BstNSI RCATGY 2 cut(s) 690, 1239
BstPI GGTNACC 1 cut(s) 941
BstSCI CCNGG 7 cut(s) 356, 422, 1041, 1102, 1121, 1210, 1480
BstSFI CTRYAG 1 cut(s) 202
BstSLI GKGCMC 1 cut(s) 479
BstUI CGCG 4 cut(s) 337, 997, 1138, 1154
BstV1I GCAGC 6 cut(s) 17, 216, 447, 782, 967, 1196
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BstZ17I GTATAC 1 cut(s) 1158
BstZI CGGCCG 1 cut(s) 831
BsuI GTATCC 1 cut(s) 1281
BsuRI GGCC 7 cut(s) 265, 407, 422, 596, 801, 833, 1216
BtgZI GCGATG 1 cut(s) 1202
BtrI CACGTC 2 cut(s) 772, 1174
BtsCI GGATG 1 cut(s) 237
BtsIMutI CAGTG 2 cut(s) 726, 970
BtuMI TCGCGA 1 cut(s) 1138
BveI ACCTGC 2 cut(s) 209, 1351
Cac8I GCNNGC 4 cut(s) 192, 433, 448, 931
CfoI GCGC 1 cut(s) 959
Cfr10I RCCGGY 4 cut(s) 59, 833, 938, 1325
Cfr13I GGNCC 4 cut(s) 263, 421, 1125, 1214
CseI GACGC 2 cut(s) 628, 1328
CsiI ACCWGGT 1 cut(s) 1041
Csp6I GTAC 3 cut(s) 251, 706, 892
CspAI ACCGGT 2 cut(s) 59, 938
CviAII CATG 5 cut(s) 260, 267, 457, 687, 1236
CviQI GTAC 3 cut(s) 251, 706, 892
DdeI CTNAG 9 cut(s) 77, 115, 392, 647, 676, 947, 1021, 1247, 1422
DpnI GATC 4 cut(s) 174, 390, 588, 1112
DpnII GATC 4 cut(s) 172, 388, 586, 1110
DraIII CACNNNGTG 2 cut(s) 636, 965
EaeI YGGCCR 2 cut(s) 799, 831
EagI CGGCCG 1 cut(s) 831
Eam1104I CTCTTC 2 cut(s) 37, 604
EarI CTCTTC 2 cut(s) 37, 604
EclXI CGGCCG 1 cut(s) 831
Eco24I GRGCYC 1 cut(s) 579
Eco31I GGTCTC 1 cut(s) 851
Eco47I GGWCC 1 cut(s) 1125
Eco52I CGGCCG 1 cut(s) 831
Eco88I CYCGRG 2 cut(s) 320, 1015
Eco91I GGTNACC 1 cut(s) 941
EcoO65I GGTNACC 1 cut(s) 941
EcoRII CCWGG 2 cut(s) 1041, 1102
EcoT38I GRGCYC 1 cut(s) 579
Esp3I CGTCTC 1 cut(s) 146
FaeI CATG 5 cut(s) 263, 270, 460, 690, 1239
FalI AAGNNNNNCTT 2 cut(s) 740, 772
FaqI GGGAC 3 cut(s) 1120, 1138, 1184
FatI CATG 5 cut(s) 259, 266, 456, 686, 1235
FauI CCCGC 1 cut(s) 1161
FblI GTMKAC 2 cut(s) 1157, 1335
Fnu4HI GCNGC 9 cut(s) 6, 205, 436, 796, 799, 898, 981, 1145, 1185
FokI GGATG 1 cut(s) 244
FriOI GRGCYC 1 cut(s) 579
Fsp4HI GCNGC 9 cut(s) 6, 205, 436, 796, 799, 898, 981, 1145, 1185
FspBI CTAG 2 cut(s) 1037, 1229
GlaI GCGC 1 cut(s) 958
GluI GCNGC 9 cut(s) 6, 205, 436, 796, 799, 898, 981, 1145, 1185
GsaI CCCAGC 1 cut(s) 1383
HaeIII GGCC 7 cut(s) 265, 407, 422, 596, 801, 833, 1216
HgaI GACGC 2 cut(s) 628, 1328
HhaI GCGC 1 cut(s) 959
Hin1II CATG 5 cut(s) 263, 270, 460, 690, 1239
Hin6I GCGC 1 cut(s) 957
HinP1I GCGC 1 cut(s) 957
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HphI GGTGA 3 cut(s) 49, 472, 1276
Hpy166II GTNNAC 5 cut(s) 253, 343, 839, 1158, 1336
Hpy188I TCNGA 3 cut(s) 553, 667, 1275
Hpy188III TCNNGA 5 cut(s) 242, 320, 649, 1137, 1414
Hpy8I GTNNAC 5 cut(s) 253, 343, 839, 1158, 1336
Hpy99I CGWCG 5 cut(s) 773, 827, 875, 1102, 1301
HpyAV CCTTC 2 cut(s) 116, 155
HpyCH4III ACNGT 7 cut(s) 169, 415, 466, 914, 1129, 1264, 1349
HpyCH4IV ACGT 9 cut(s) 139, 615, 704, 771, 810, 1173, 1268, 1307, 1452
HpyCH4V TGCA 2 cut(s) 204, 446
HpyF10VI GCNNNNNNNGC 6 cut(s) 428, 636, 977, 1144, 1160, 1222
HpyF3I CTNAG 9 cut(s) 77, 115, 392, 647, 676, 947, 1021, 1247, 1422
HpySE526I ACGT 9 cut(s) 139, 615, 704, 771, 810, 1173, 1268, 1307, 1452
Hsp92II CATG 5 cut(s) 263, 270, 460, 690, 1239
HspAI GCGC 1 cut(s) 957
Kzo9I GATC 4 cut(s) 172, 388, 586, 1110
LmnI GCTCC 6 cut(s) 26, 574, 938, 968, 1230, 1483
Lsp1109I GCAGC 6 cut(s) 17, 216, 447, 782, 967, 1196
LweI GCATC 2 cut(s) 245, 1381
MabI ACCWGGT 1 cut(s) 1041
MaeI CTAG 2 cut(s) 1037, 1229
MaeII ACGT 9 cut(s) 139, 615, 704, 771, 810, 1173, 1268, 1307, 1452
MaeIII GTNAC 6 cut(s) 460, 623, 700, 941, 1264, 1303
MalI GATC 4 cut(s) 174, 390, 588, 1112
MbiI CCGCTC 1 cut(s) 180
MboI GATC 4 cut(s) 172, 388, 586, 1110
MboII GAAGA 7 cut(s) 24, 269, 591, 778, 781, 895, 1441
MfeI CAATTG 1 cut(s) 398
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 2 cut(s) 479, 579
MluCI AATT 7 cut(s) 72, 315, 371, 398, 1077, 1283, 1313
MlyI GAGTC 5 cut(s) 79, 348, 526, 707, 1112
MmeI TCCRAC 5 cut(s) 667, 1027, 1283, 1290, 1450
MseI TTAA 1 cut(s) 758
MslI CAYNNNNRTG 1 cut(s) 258
MspR9I CCNGG 7 cut(s) 358, 424, 1043, 1104, 1123, 1212, 1482
MunI CAATTG 1 cut(s) 398
MvaI CCWGG 2 cut(s) 1043, 1104
MvnI CGCG 4 cut(s) 337, 997, 1138, 1154
MwoI GCNNNNNNNGC 6 cut(s) 428, 636, 977, 1144, 1160, 1222
NciI CCSGG 5 cut(s) 358, 424, 1123, 1212, 1482
NdeII GATC 4 cut(s) 172, 388, 586, 1110
NlaIII CATG 5 cut(s) 263, 270, 460, 690, 1239
NlaIV GGNNCC 3 cut(s) 576, 1126, 1215
NmeAIII GCCGAG 2 cut(s) 572, 809
NmuCI GTSAC 3 cut(s) 460, 700, 1264
NruI TCGCGA 1 cut(s) 1138
NspI RCATGY 2 cut(s) 690, 1239
NspV TTCGAA 1 cut(s) 1352
PaeR7I CTCGAG 2 cut(s) 320, 1015
PaqCI CACCTGC 1 cut(s) 209
PcsI WCGNNNNNNNCGW 3 cut(s) 774, 1094, 1106
PfeI GAWTC 6 cut(s) 128, 304, 554, 662, 999, 1050
Pfl23II CGTACG 1 cut(s) 705
PfoI TCCNGGA 2 cut(s) 356, 1121
PinAI ACCGGT 2 cut(s) 59, 938
PkrI GCNGC 9 cut(s) 7, 206, 437, 797, 800, 899, 982, 1146, 1186
PleI GAGTC 5 cut(s) 79, 347, 526, 707, 1112
PpsI GAGTC 5 cut(s) 79, 347, 526, 707, 1112
Psp1406I AACGTT 1 cut(s) 615
Psp6I CCWGG 2 cut(s) 1041, 1102
PspEI GGTNACC 1 cut(s) 941
PspFI CCCAGC 1 cut(s) 1379
PspGI CCWGG 2 cut(s) 1041, 1102
PspLI CGTACG 1 cut(s) 705
PspN4I GGNNCC 3 cut(s) 576, 1126, 1215
PspPI GGNCC 4 cut(s) 263, 421, 1125, 1214
PspXI VCTCGAGB 1 cut(s) 1015
PstI CTGCAG 1 cut(s) 206
PsuI RGATCY 1 cut(s) 388
RruI TCGCGA 1 cut(s) 1138
RsaI GTAC 3 cut(s) 252, 707, 893
RsaNI GTAC 3 cut(s) 251, 706, 892
RseI CAYNNNNRTG 1 cut(s) 258
SaqAI TTAA 1 cut(s) 758
SatI GCNGC 9 cut(s) 6, 205, 436, 796, 799, 898, 981, 1145, 1185
Sau3AI GATC 4 cut(s) 172, 388, 586, 1110
Sau96I GGNCC 4 cut(s) 263, 421, 1125, 1214
SchI GAGTC 5 cut(s) 79, 348, 526, 707, 1112
ScrFI CCNGG 7 cut(s) 358, 424, 1043, 1104, 1123, 1212, 1482
SduI GDGCHC 2 cut(s) 479, 579
SexAI ACCWGGT 1 cut(s) 1041
SfaNI GCATC 2 cut(s) 245, 1381
SfcI CTRYAG 1 cut(s) 202
Sfr274I CTCGAG 2 cut(s) 320, 1015
SfuI TTCGAA 1 cut(s) 1352
SinI GGWCC 1 cut(s) 1125
SlaI CTCGAG 2 cut(s) 320, 1015
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 2 cut(s) 320, 1015
SmoI CTYRAG 2 cut(s) 320, 1015
Sse9I AATT 7 cut(s) 72, 315, 371, 398, 1077, 1283, 1313
SspMI CTAG 2 cut(s) 1037, 1229
StyD4I CCNGG 7 cut(s) 356, 422, 1041, 1102, 1121, 1210, 1480
TaaI ACNGT 7 cut(s) 169, 415, 466, 914, 1129, 1264, 1349
TaiI ACGT 9 cut(s) 142, 618, 707, 774, 813, 1176, 1271, 1310, 1455
TaqI TCGA 7 cut(s) 321, 585, 777, 873, 1016, 1116, 1352
TasI AATT 7 cut(s) 72, 315, 371, 398, 1077, 1283, 1313
TatI WGTACW 1 cut(s) 891
TauI GCSGC 3 cut(s) 801, 900, 1147
TfiI GAWTC 6 cut(s) 128, 304, 554, 662, 999, 1050
Tru1I TTAA 1 cut(s) 758
Tru9I TTAA 1 cut(s) 758
TscAI CASTG 2 cut(s) 733, 970
TseFI GTSAC 3 cut(s) 460, 700, 1264
TseI GCWGC 6 cut(s) 5, 204, 435, 795, 980, 1184
Tsp45I GTSAC 3 cut(s) 460, 700, 1264
TspDTI ATGAA 2 cut(s) 137, 317
TspGWI ACGGA 4 cut(s) 674, 688, 723, 1191
TspRI CASTG 2 cut(s) 733, 970
VpaK11BI GGWCC 1 cut(s) 1125
XapI RAATTY 1 cut(s) 1283
XceI RCATGY 2 cut(s) 690, 1239
XhoI CTCGAG 2 cut(s) 320, 1015
XmiI GTMKAC 2 cut(s) 1157, 1335
XspI CTAG 2 cut(s) 1037, 1229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.