MD04G1018800.v1.1

F-box protein At3g07870-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000430
Physical Location & Seq
Reverse (-)
2169307 .. 2170557
1251 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1018800.v1.1.491

Sequence Viewer

Length: 1251 bp
ATGAAGAAAACTAAAGCGTGCTGCAGGCACCCACCAAGCAGCAGCGACGGATCCCTGAAACTAGAAGTTAATGAAGAAGAAGAGCACGATCATAAACCCTACATCCTTCAGTTACCAGACGATGTAACAGTGCAGATCTTCTGCAAACTCCCAATCAAAACGCTCGTCGAGTGCAACCGTACATGCAAGTCCTGGCGTCGTTTGCTATCGGACCCTCAGTTCACAGAAGACCTATTTTCACGAACGCCGGATTGCCTTTTGTTCAACGAACTGAATCACCCCAAATGGAAAGGCCAGTTTCTGGTCGACTTCGACAGGGCTTCAAACCGAAACCAGGTCGTGCTCAAGCGCTTCAGTAAAATCATCTACCCAAATGTCAAAGCTAAAGTACTTGAATATTCCCTTGTGGGTTCGTGCAACGGCTTCCTCTGCTACCGCGAATCTCTCGTGTACCCTGCGATGACAGAGGTCCATCGTTTTTACTTGTCTAATCCTGTCACCGGTGAGTCTTTAACTCTTCCAACACCTACCGAACCTGCAAAGAGAGATTGTTTAGGGTTTGGGTTTAGTCCCATTAGCAACCTCTATAAAGTAGTCCGGATTATGAGTCCGTTTGAAGGATCTTGTGATGTAATGGTTTTGAAAGTTGGCTCTGGGATTTGGAGAAAAACTGGAGAATCCTTCGACAGTTTCCATGGAAATTCTCTTGGGGTTTATCTCAATGGATTTCTTTATTGGATTGCTCAAAGTCATAACAGGGACCGTCCCGTTCTATATGCATATGGCATCCCTGTTTCTCCAAGTGCAGGTGCTCCCTTTCTATGTGCATTTGACGTCGAAAGAGAGTGCTTCCAACAGTTACCACTACCGCCTTGCTGTTTGCATCTGACAGTTGCTCAGCTCAAGCTCGGAGTCCTCAAAGGTAGTCTCTTCCTAATTCTTAGATCAACACCTAGTATGATTGAGATTTGGGTGATGAAGGAGTCTTGGACTAAAGAGCATGAGTTCACATACTCTTCTAAGTTTTGTGTTACTGATATATTGAAATTCACAAAGGAAGGGAAGATCTGGTTTACGCATGAGAATCGATTGTGGGCTTATACTCCTAAGATGATTGTAAGATTTGACCTTGATGGTTTACCTTCAAATCTTTCAGAAGGATTTCTCCATATTCCCAACTTCACACCGCTTTGGCCATCTTTACTAAACAGGAATCAGGTCAAGCAGGAAAGCGACAAGGAATCAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

417

Amino Acids

47.73

Weight (kDa)

8.27

Isoelectric Point (pI)

46.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 35 - 74 1.2e-10 F-box-like
F-box PF00646 35 - 75 1.9e-08 F-box domain
FBA_1 PF07734 113 - 355 3.8e-19 F-box associated beta propeller domain
FBA_3 PF08268 131 - 359 2.4e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000430)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g34920 FvH4_3g37340 FvH4_4g12931 FvH4_4g13090 FvH4_4g13100 FvH4_6g33904 FvH4_6g39874
malus_domestica MD04G1018800.v1.1 MD04G1020000.v1.1 MD04G1020500.v1.1 MD04G1021100.v1.1
prunus_persica Prupe.1G167600_v2.0.a1 Prupe.1G167800_v2.0.a1 Prupe.1G167900_v2.0.a1 Prupe.1G168000_v2.0.a1 Prupe.1G168100_v2.0.a1 Prupe.1G169600_v2.0.a1 Prupe.1G169800_v2.0.a1 Prupe.1G169900_v2.0.a1 Prupe.1G170000_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G187600_v2.0.a1
pyrus_communis pycom04g01610 pycom04g01630 pycom04g01660
rosa_chinensis RchiOBHm_Chr3g0474061 RchiOBHm_Chr3g0474071 RchiOBHm_Chr3g0494781 RchiOBHm_Chr4g0412631 RchiOBHm_Chr4g0412831 RchiOBHm_Chr4g0412861
rosa_laevigata RLG00000008252 RLG00000008255 RLG00000008272 RLG00000023952 RLG00000026909 RLG00000026910
rosa_multiflora Rmu_co8499129.1_g000001 Rmu_sc0001755.1_g000010 Rmu_sc0001755.1_g000011 Rmu_sc0002068.1_g000006 Rmu_sc0002072.1_g000048 Rmu_sc0002878.1_g000004 Rmu_sc0003022.1_g000007 Rmu_sc0003961.1_g000002 Rmu_sc0010735.1_g000006 Rmu_sc0016141.1_g000002
rosa_roxburghii Rroxscaffold_3G00261940 Rroxscaffold_4G00285070 Rroxscaffold_5G00356800 Rroxscaffold_5G00357100 Rroxscaffold_5G00357120 Rroxscaffold_6G00407500
rosa_rugosa Rorug01G0370900 Rorug03G0138300 Rorug03G0138700 Rorug04G0117100 Rorug04G0117200 Rorug04G0117300 Rorug04G0117300 Rorug07G0011200
rosa_samantha Rh1AG379300 Rh1BG342700 Rh1BG342800 Rh1BG384500 Rh1BG384800 Rh1CG356400 Rh1CG398400 Rh1CG398800 Rh1DG374100 Rh1DG415800 Rh1DG416000 Rh3AG188500 Rh3BG217500 Rh3BG217700 Rh3CG213400 Rh3CG213600 Rh4AG174500 Rh4AG175800 Rh4AG175900 Rh4AG176000 Rh4BG176100 Rh4BG176400 Rh4CG185400 Rh4CG186900 Rh4CG187100 Rh4DG172900 Rh4DG173100 Rh7AG137700 Rh7BG138000 Rh7CG141600
rosa_wichuraiana Rw4G014620 Rw4G014750 Rw4G014760 Rw4G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 797
AatII GACGTC 1 cut(s) 837
Acc36I ACCTGC 2 cut(s) 544, 797
AccB1I GGYRCC 1 cut(s) 27
AccB7I CCANNNNNTGG 1 cut(s) 301
AccI GTMKAC 1 cut(s) 306
AccII CGCG 1 cut(s) 438
AccIII TCCGGA 1 cut(s) 597
AciI CCGC 3 cut(s) 436, 869, 1187
AclWI GGATC 3 cut(s) 45, 58, 628
AcoI YGGCCR 1 cut(s) 1193
AcsI RAATTY 2 cut(s) 700, 1046
AcuI CTGAAG 2 cut(s) 92, 337
AcyI GRCGYC 2 cut(s) 196, 834
AfaI GTAC 3 cut(s) 181, 390, 452
AfeI AGCGCT 1 cut(s) 350
AfiI CCNNNNNNNGG 5 cut(s) 301, 334, 500, 617, 806
AgeI ACCGGT 1 cut(s) 500
AgsI TTSAA 7 cut(s) 265, 324, 395, 617, 643, 1045, 1146
AjnI CCWGG 2 cut(s) 191, 333
AloI GAACNNNNNNTCC 2 cut(s) 203, 235
AluBI AGCT 3 cut(s) 383, 901, 907
AluI AGCT 3 cut(s) 383, 901, 907
Alw21I GWGCWC 3 cut(s) 87, 345, 814
Alw26I GTCTC 1 cut(s) 932
AlwI GGATC 3 cut(s) 45, 58, 628
AlwNI CAGNNNCTG 1 cut(s) 301
Aor13HI TCCGGA 1 cut(s) 597
Aor51HI AGCGCT 1 cut(s) 350
AoxI GGCC 2 cut(s) 292, 1193
ApeKI GCWGC 3 cut(s) 21, 39, 42
ApoI RAATTY 2 cut(s) 700, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
AsiGI ACCGGT 1 cut(s) 500
Asp700I GAANNNNTTC 1 cut(s) 1161
AspLEI GCGC 1 cut(s) 351
AspS9I GGNCC 3 cut(s) 211, 469, 760
AsuHPI GGTGA 4 cut(s) 269, 490, 515, 985
AvaII GGWCC 3 cut(s) 211, 469, 760
BalI TGGCCA 1 cut(s) 1195
BamHI GGATCC 1 cut(s) 50
BanI GGYRCC 1 cut(s) 27
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 1 cut(s) 234
Bbv12I GWGCWC 3 cut(s) 87, 345, 814
BbvI GCAGC 3 cut(s) 8, 51, 54
BccI CCATC 3 cut(s) 480, 1127, 1204
BceAI ACGGC 1 cut(s) 436
BcgI CGANNNNNNTGC 2 cut(s) 1067, 1101
BciT130I CCWGG 2 cut(s) 193, 335
BcoDI GTCTC 1 cut(s) 932
BfaI CTAG 2 cut(s) 62, 954
BfmI CTRYAG 1 cut(s) 22
BfoI RGCGCY 1 cut(s) 352
BfuAI ACCTGC 2 cut(s) 544, 797
BglII AGATCT 2 cut(s) 135, 1065
BisI GCNGC 3 cut(s) 22, 40, 43
BlpI GCTNAGC 1 cut(s) 897
BlsI GCNGC 3 cut(s) 23, 41, 44
BmcAI AGTACT 1 cut(s) 390
Bme1390I CCNGG 2 cut(s) 193, 335
Bme18I GGWCC 3 cut(s) 211, 469, 760
BmgT120I GGNCC 3 cut(s) 211, 469, 760
BmiI GGNNCC 4 cut(s) 29, 52, 213, 761
BmrFI CCNGG 2 cut(s) 193, 335
BmsI GCATC 2 cut(s) 795, 892
BoxI GACNNNNGTC 1 cut(s) 467
BpiI GAAGAC 1 cut(s) 234
BpmI CTGGAG 1 cut(s) 693
Bpu1102I GCTNAGC 1 cut(s) 897
BpuEI CTTGAG 2 cut(s) 329, 887
Bsa29I ATCGAT 1 cut(s) 1087
BsaHI GRCGYC 2 cut(s) 196, 834
BsaJI CCNNGG 1 cut(s) 694
BsaWI WCCGGW 2 cut(s) 500, 597
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 334, 500, 617, 806
Bse118I RCCGGY 1 cut(s) 500
Bse1I ACTGG 2 cut(s) 295, 676
BseAI TCCGGA 1 cut(s) 597
BseBI CCWGG 2 cut(s) 193, 335
BseCI ATCGAT 1 cut(s) 1087
BseDI CCNNGG 1 cut(s) 694
BseGI GGATG 2 cut(s) 102, 786
BseLI CCNNNNNNNGG 5 cut(s) 301, 334, 500, 617, 806
BseMII CTCAG 2 cut(s) 230, 911
BseNI ACTGG 2 cut(s) 295, 676
BseXI GCAGC 3 cut(s) 8, 51, 54
BsgI GTGCAG 2 cut(s) 152, 825
Bsh1236I CGCG 1 cut(s) 438
BshFI GGCC 2 cut(s) 294, 1195
BshNI GGYRCC 1 cut(s) 27
BshTI ACCGGT 1 cut(s) 500
BshVI ATCGAT 1 cut(s) 1087
BsiHKAI GWGCWC 3 cut(s) 87, 345, 814
BsiSI CCGG 3 cut(s) 248, 501, 598
BslFI GGGAC 3 cut(s) 555, 750, 773
BslI CCNNNNNNNGG 5 cut(s) 301, 334, 500, 617, 806
BsmAI GTCTC 1 cut(s) 932
BsmFI GGGAC 3 cut(s) 555, 750, 773
BsnI GGCC 2 cut(s) 294, 1195
Bsp1286I GDGCHC 3 cut(s) 87, 345, 814
Bsp13I TCCGGA 1 cut(s) 597
Bsp143I GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
Bsp1720I GCTNAGC 1 cut(s) 897
Bsp19I CCATGG 1 cut(s) 694
BspACI CCGC 3 cut(s) 436, 869, 1187
BspANI GGCC 2 cut(s) 294, 1195
BspCNI CTCAG 2 cut(s) 229, 910
BspDI ATCGAT 1 cut(s) 1087
BspEI TCCGGA 1 cut(s) 597
BspFNI CGCG 1 cut(s) 438
BspLI GGNNCC 4 cut(s) 29, 52, 213, 761
BspMAI CTGCAG 1 cut(s) 26
BspMI ACCTGC 2 cut(s) 544, 797
BspPI GGATC 3 cut(s) 45, 58, 628
BspQI GCTCTTC 1 cut(s) 75
BspT107I GGYRCC 1 cut(s) 27
BsrFI RCCGGY 1 cut(s) 500
BsrI ACTGG 2 cut(s) 295, 676
BssAI RCCGGY 1 cut(s) 500
BssECI CCNNGG 1 cut(s) 694
BssMI GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
BssNI GRCGYC 2 cut(s) 196, 834
BssSI CACGAG 1 cut(s) 446
BssT1I CCWWGG 1 cut(s) 694
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 2 cut(s) 193, 335
Bst4CI ACNGT 6 cut(s) 130, 179, 689, 764, 858, 892
Bst6I CTCTTC 4 cut(s) 75, 522, 935, 1021
BstACI GRCGYC 2 cut(s) 196, 834
BstC8I GCNNGC 2 cut(s) 19, 26
BstDEI CTNAG 5 cut(s) 216, 897, 941, 1020, 1107
BstDSI CCRYGG 1 cut(s) 694
BstF5I GGATG 2 cut(s) 102, 786
BstFNI CGCG 1 cut(s) 438
BstH2I RGCGCY 1 cut(s) 352
BstHHI GCGC 1 cut(s) 351
BstKTI GATC 6 cut(s) 53, 91, 138, 623, 947, 1068
BstMAI GTCTC 1 cut(s) 932
BstMBI GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
BstMWI GCNNNNNNNGC 2 cut(s) 202, 429
BstNI CCWGG 2 cut(s) 193, 335
BstNSI RCATGY 1 cut(s) 186
BstPAI GACNNNNGTC 1 cut(s) 467
BstSCI CCNGG 2 cut(s) 191, 333
BstSFI CTRYAG 1 cut(s) 22
BstUI CGCG 1 cut(s) 438
BstV1I GCAGC 3 cut(s) 8, 51, 54
BstV2I GAAGAC 1 cut(s) 234
BstX2I RGATCY 4 cut(s) 50, 135, 620, 1065
BstYI RGATCY 4 cut(s) 50, 135, 620, 1065
Bsu15I ATCGAT 1 cut(s) 1087
BsuRI GGCC 2 cut(s) 294, 1195
BsuTUI ATCGAT 1 cut(s) 1087
BtgI CCRYGG 1 cut(s) 694
BtgZI GCGATG 1 cut(s) 473
BtsCI GGATG 2 cut(s) 102, 786
BtsIMutI CAGTG 1 cut(s) 135
BveI ACCTGC 2 cut(s) 544, 797
Cac8I GCNNGC 2 cut(s) 19, 26
CaiI CAGNNNCTG 1 cut(s) 301
CfoI GCGC 1 cut(s) 351
Cfr10I RCCGGY 1 cut(s) 500
Cfr13I GGNCC 3 cut(s) 211, 469, 760
ClaI ATCGAT 1 cut(s) 1087
CseI GACGC 1 cut(s) 185
CsiI ACCWGGT 1 cut(s) 333
Csp6I GTAC 3 cut(s) 180, 389, 451
CspAI ACCGGT 1 cut(s) 500
CviAII CATG 4 cut(s) 183, 695, 1001, 1079
CviJI RGCY 9 cut(s) 294, 320, 383, 423, 651, 901, 907, 1097, 1195
CviKI_1 RGCY 9 cut(s) 294, 320, 383, 423, 651, 901, 907, 1097, 1195
CviQI GTAC 3 cut(s) 180, 389, 451
DdeI CTNAG 5 cut(s) 216, 897, 941, 1020, 1107
DpnI GATC 6 cut(s) 52, 90, 137, 622, 946, 1067
DpnII GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
EaeI YGGCCR 1 cut(s) 1193
Eam1104I CTCTTC 4 cut(s) 75, 522, 935, 1021
EarI CTCTTC 4 cut(s) 75, 522, 935, 1021
Eco130I CCWWGG 1 cut(s) 694
Eco47I GGWCC 3 cut(s) 211, 469, 760
Eco47III AGCGCT 1 cut(s) 350
Eco57I CTGAAG 2 cut(s) 92, 337
EcoRII CCWGG 2 cut(s) 191, 333
EcoT14I CCWWGG 1 cut(s) 694
EcoT22I ATGCAT 1 cut(s) 781
ErhI CCWWGG 1 cut(s) 694
FaeI CATG 4 cut(s) 186, 698, 1004, 1082
FaqI GGGAC 3 cut(s) 555, 750, 773
FatI CATG 4 cut(s) 182, 694, 1000, 1078
FauNDI CATATG 1 cut(s) 781
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 3 cut(s) 22, 40, 43
FokI GGATG 2 cut(s) 89, 773
Fsp4HI GCNGC 3 cut(s) 22, 40, 43
FspBI CTAG 2 cut(s) 62, 954
GlaI GCGC 1 cut(s) 350
GluI GCNGC 3 cut(s) 22, 40, 43
GsuI CTGGAG 1 cut(s) 693
HaeII RGCGCY 1 cut(s) 352
HaeIII GGCC 2 cut(s) 294, 1195
HapII CCGG 3 cut(s) 248, 501, 598
HgaI GACGC 1 cut(s) 185
HhaI GCGC 1 cut(s) 351
Hin1I GRCGYC 2 cut(s) 196, 834
Hin1II CATG 4 cut(s) 186, 698, 1004, 1082
Hin6I GCGC 1 cut(s) 349
HinP1I GCGC 1 cut(s) 349
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HpaII CCGG 3 cut(s) 248, 501, 598
HphI GGTGA 4 cut(s) 269, 490, 515, 985
Hpy166II GTNNAC 6 cut(s) 222, 307, 451, 1008, 1074, 1139
Hpy188I TCNGA 5 cut(s) 211, 888, 911, 1156, 1246
Hpy188III TCNNGA 2 cut(s) 240, 598
Hpy8I GTNNAC 6 cut(s) 222, 307, 451, 1008, 1074, 1139
Hpy99I CGWCG 4 cut(s) 50, 170, 201, 839
HpyAV CCTTC 7 cut(s) 116, 611, 691, 973, 1052, 1151, 1152
HpyCH4III ACNGT 6 cut(s) 130, 179, 689, 764, 858, 892
HpyCH4IV ACGT 1 cut(s) 834
HpyF10VI GCNNNNNNNGC 2 cut(s) 202, 429
HpyF3I CTNAG 5 cut(s) 216, 897, 941, 1020, 1107
HpySE526I ACGT 1 cut(s) 834
Hsp92I GRCGYC 2 cut(s) 196, 834
Hsp92II CATG 4 cut(s) 186, 698, 1004, 1082
HspAI GCGC 1 cut(s) 349
Kpn2I TCCGGA 1 cut(s) 597
Kzo9I GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 1 cut(s) 817
Lsp1109I GCAGC 3 cut(s) 8, 51, 54
LweI GCATC 2 cut(s) 795, 892
MabI ACCWGGT 1 cut(s) 333
MaeI CTAG 2 cut(s) 62, 954
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 5 cut(s) 111, 124, 496, 858, 1030
MalI GATC 6 cut(s) 52, 90, 137, 622, 946, 1067
MboI GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
MflI RGATCY 4 cut(s) 50, 135, 620, 1065
MhlI GDGCHC 3 cut(s) 87, 345, 814
MlsI TGGCCA 1 cut(s) 1195
MluCI AATT 3 cut(s) 700, 936, 1046
MluNI TGGCCA 1 cut(s) 1195
MlyI GAGTC 4 cut(s) 515, 616, 921, 992
MmeI TCCRAC 2 cut(s) 545, 877
MnlI CCTC 5 cut(s) 225, 437, 460, 593, 926
Mox20I TGGCCA 1 cut(s) 1195
Mph1103I ATGCAT 1 cut(s) 781
MroI TCCGGA 1 cut(s) 597
MroXI GAANNNNTTC 1 cut(s) 1161
MscI TGGCCA 1 cut(s) 1195
MseI TTAA 2 cut(s) 69, 512
Msp20I TGGCCA 1 cut(s) 1195
MspI CCGG 3 cut(s) 248, 501, 598
MspR9I CCNGG 2 cut(s) 193, 335
MvaI CCWGG 2 cut(s) 193, 335
MvnI CGCG 1 cut(s) 438
MwoI GCNNNNNNNGC 2 cut(s) 202, 429
NcoI CCATGG 1 cut(s) 694
NdeI CATATG 1 cut(s) 781
NdeII GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
NlaIII CATG 4 cut(s) 186, 698, 1004, 1082
NlaIV GGNNCC 4 cut(s) 29, 52, 213, 761
NmuCI GTSAC 1 cut(s) 496
NsiI ATGCAT 1 cut(s) 781
NspI RCATGY 1 cut(s) 186
PaqCI CACCTGC 1 cut(s) 797
PciSI GCTCTTC 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 1161
PfeI GAWTC 6 cut(s) 274, 440, 677, 1084, 1213, 1241
PflMI CCANNNNNTGG 1 cut(s) 301
PinAI ACCGGT 1 cut(s) 500
PkrI GCNGC 3 cut(s) 23, 41, 44
PleI GAGTC 4 cut(s) 514, 615, 920, 991
PpsI GAGTC 4 cut(s) 514, 615, 920, 991
PshAI GACNNNNGTC 1 cut(s) 467
Psp6I CCWGG 2 cut(s) 191, 333
PspGI CCWGG 2 cut(s) 191, 333
PspN4I GGNNCC 4 cut(s) 29, 52, 213, 761
PspPI GGNCC 3 cut(s) 211, 469, 760
PstI CTGCAG 1 cut(s) 26
PstNI CAGNNNCTG 1 cut(s) 301
PsuI RGATCY 4 cut(s) 50, 135, 620, 1065
RsaI GTAC 3 cut(s) 181, 390, 452
RsaNI GTAC 3 cut(s) 180, 389, 451
SalI GTCGAC 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 2 cut(s) 69, 512
SatI GCNGC 3 cut(s) 22, 40, 43
Sau3AI GATC 6 cut(s) 50, 88, 135, 620, 944, 1065
Sau96I GGNCC 3 cut(s) 211, 469, 760
ScaI AGTACT 1 cut(s) 390
SchI GAGTC 4 cut(s) 515, 616, 921, 992
ScrFI CCNGG 2 cut(s) 193, 335
SduI GDGCHC 3 cut(s) 87, 345, 814
SexAI ACCWGGT 1 cut(s) 333
SfaNI GCATC 2 cut(s) 795, 892
SfcI CTRYAG 1 cut(s) 22
SgrAI CRCCGGYG 1 cut(s) 500
SinI GGWCC 3 cut(s) 211, 469, 760
SmlI CTYRAG 2 cut(s) 344, 902
SmoI CTYRAG 2 cut(s) 344, 902
Sse9I AATT 3 cut(s) 700, 936, 1046
SsiI CCGC 3 cut(s) 436, 869, 1187
SspI AATATT 1 cut(s) 398
SspMI CTAG 2 cut(s) 62, 954
StyD4I CCNGG 2 cut(s) 191, 333
StyI CCWWGG 1 cut(s) 694
TaaI ACNGT 6 cut(s) 130, 179, 689, 764, 858, 892
TaiI ACGT 1 cut(s) 837
TaqI TCGA 6 cut(s) 168, 306, 312, 684, 837, 1087
TasI AATT 3 cut(s) 700, 936, 1046
TatI WGTACW 1 cut(s) 388
TfiI GAWTC 6 cut(s) 274, 440, 677, 1084, 1213, 1241
Tru1I TTAA 2 cut(s) 69, 512
Tru9I TTAA 2 cut(s) 69, 512
TscAI CASTG 1 cut(s) 135
TseFI GTSAC 1 cut(s) 496
TseI GCWGC 3 cut(s) 21, 39, 42
Tsp45I GTSAC 1 cut(s) 496
TspDTI ATGAA 3 cut(s) 17, 87, 992
TspGWI ACGGA 2 cut(s) 63, 600
TspRI CASTG 1 cut(s) 135
Van91I CCANNNNNTGG 1 cut(s) 301
VpaK11BI GGWCC 3 cut(s) 211, 469, 760
XapI RAATTY 2 cut(s) 700, 1046
XceI RCATGY 1 cut(s) 186
XmiI GTMKAC 1 cut(s) 306
XmnI GAANNNNTTC 1 cut(s) 1161
XspI CTAG 2 cut(s) 62, 954
ZraI GACGTC 1 cut(s) 835
ZrmI AGTACT 1 cut(s) 390
Zsp2I ATGCAT 1 cut(s) 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.