Rroxscaffold_3G00261940

F-box protein At3g07870-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000430
Physical Location & Seq
Reverse (-)
56069629 .. 56070822
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00261940.1

Sequence Viewer

Length: 1194 bp
ATGAACCCAACCAGAGTTTGCCGGCGCCACCCATCGGCCAACAACAAAGAACAACAAGAGAATGCCAGGAAACCCTCGTGCAATATTCTAAAACTACCAATGGATTTAACAGCGGAGATCTTGCACAGACTCCCAGGCAAATCACTCGTCCAGTGCAAGTACGTGTGCTCGTCTTGGCGTTGCTGGCTCCTAAATCCTCACTTCACCAAACCCCTACTCCCACGAACACGTGGCTGCCTCTTGATCCGTGGCTTCACCGACCTCACAAACCCTAGCGCCAGCGCCACCTTCTTGATAGATCTCGACAAGAAAGACTACTCGAAGCCAAAGGTCGACGTTGCAATGAAGCTTCCGAGGGATCCGATTCTCCCACCTGTTGGTCTAGCCACTGTAGGTTCGTGCAACGGCCTCCTCTGTCTAGTTGATTTACGTGTCTCCCAATATTATATATCAAATCCCATTACCGGTGAGTCTTTAGCTCTTCCAACAATGCCTACCAAACCGAAACATAAACTGAGCCATATGCATATGATTTCCGGGCTAGGGTTTTGTCCCGTCAGCCGTGTCTATAAGGTACTGTGCACCTTTCCAATAAAAGGTTCTAGTGATGAGGAGGAGGCAATGGAGGCAATGGTTTTGACAGTTGGCTGCGGAAGTTGGAGAAGCATTGGGCATTATAAAGGCACGGCTGCTGGGAAAACACAAAAGCGTATGATTTATCTGAATGGATCCCTTCACTGGATAAATGATTATGGAAACAGGACTATTTCGATATGTGCCTTTGATGTTGAGAGAGAGGTGTTCCAACAATTACCATCCTTTACTGCGGGAGCTCCCTATTTGTGGGATTGTGATCTTGGAGTTTTGAGAGGTTGCCTTTCCCTATTTGTTAACATAAGCACTTCGACTATTTATGGGGACATTAGTTTCTGGGTGATGAACGATTATGGTGTCAAGGAGTCTTGGACCAAAGAGTGTGAAATCGGAAGCAGAAGATTACTGCCTACCACTCGAGCACTGGAATGTACAGAGGAAGGGCAAATATTGAGGTTCCAATATGAAAAACTGCTTGTATATACTAGCGATGGGGGACTGGTGAGGATTCAAGCTGATGGGATACCATTAAACATTACGAATGTATGTGTCCATATTCCAAGCTTTGTTTCGCTTAATGATATGATCAGGGGTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

397

Amino Acids

44.39

Weight (kDa)

8.83

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 69 5.3e-07 F-box domain
FBA_1 PF07734 103 - 330 4.1e-17 F-box associated beta propeller domain
FBA_3 PF08268 106 - 325 2.5e-22 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 116 - 334 5.7e-07 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000430)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g34920 FvH4_3g37340 FvH4_4g12931 FvH4_4g13090 FvH4_4g13100 FvH4_6g33904 FvH4_6g39874
malus_domestica MD04G1018800.v1.1 MD04G1020000.v1.1 MD04G1020500.v1.1 MD04G1021100.v1.1
prunus_persica Prupe.1G167600_v2.0.a1 Prupe.1G167800_v2.0.a1 Prupe.1G167900_v2.0.a1 Prupe.1G168000_v2.0.a1 Prupe.1G168100_v2.0.a1 Prupe.1G169600_v2.0.a1 Prupe.1G169800_v2.0.a1 Prupe.1G169900_v2.0.a1 Prupe.1G170000_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G187600_v2.0.a1
pyrus_communis pycom04g01610 pycom04g01630 pycom04g01660
rosa_chinensis RchiOBHm_Chr3g0474061 RchiOBHm_Chr3g0474071 RchiOBHm_Chr3g0494781 RchiOBHm_Chr4g0412631 RchiOBHm_Chr4g0412831 RchiOBHm_Chr4g0412861
rosa_laevigata RLG00000008252 RLG00000008255 RLG00000008272 RLG00000023952 RLG00000026909 RLG00000026910
rosa_multiflora Rmu_co8499129.1_g000001 Rmu_sc0001755.1_g000010 Rmu_sc0001755.1_g000011 Rmu_sc0002068.1_g000006 Rmu_sc0002072.1_g000048 Rmu_sc0002878.1_g000004 Rmu_sc0003022.1_g000007 Rmu_sc0003961.1_g000002 Rmu_sc0010735.1_g000006 Rmu_sc0016141.1_g000002
rosa_roxburghii Rroxscaffold_3G00261940 Rroxscaffold_4G00285070 Rroxscaffold_5G00356800 Rroxscaffold_5G00357100 Rroxscaffold_5G00357120 Rroxscaffold_6G00407500
rosa_rugosa Rorug01G0370900 Rorug03G0138300 Rorug03G0138700 Rorug04G0117100 Rorug04G0117200 Rorug04G0117300 Rorug04G0117300 Rorug07G0011200
rosa_samantha Rh1AG379300 Rh1BG342700 Rh1BG342800 Rh1BG384500 Rh1BG384800 Rh1CG356400 Rh1CG398400 Rh1CG398800 Rh1DG374100 Rh1DG415800 Rh1DG416000 Rh3AG188500 Rh3BG217500 Rh3BG217700 Rh3CG213400 Rh3CG213600 Rh4AG174500 Rh4AG175800 Rh4AG175900 Rh4AG176000 Rh4BG176100 Rh4BG176400 Rh4CG185400 Rh4CG186900 Rh4CG187100 Rh4DG172900 Rh4DG173100 Rh7AG137700 Rh7BG138000 Rh7CG141600
rosa_wichuraiana Rw4G014620 Rw4G014750 Rw4G014760 Rw4G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AccB1I GGYRCC 1 cut(s) 24
AccB7I CCANNNNNTGG 1 cut(s) 377
AccI GTMKAC 1 cut(s) 333
AciI CCGC 3 cut(s) 113, 651, 827
AclWI GGATC 5 cut(s) 238, 353, 366, 723, 736
AcoI YGGCCR 1 cut(s) 36
AcvI CACGTG 1 cut(s) 230
AcyI GRCGYC 1 cut(s) 25
AfaI GTAC 4 cut(s) 161, 576, 1027, 1189
AfiI CCNNNNNNNGG 7 cut(s) 34, 377, 464, 543, 596, 738, 843
AflIII ACRYGT 3 cut(s) 162, 227, 430
AgeI ACCGGT 1 cut(s) 464
AgsI TTSAA 1 cut(s) 1106
AjnI CCWGG 2 cut(s) 65, 133
AjuI GAANNNNNNNTTGG 4 cut(s) 583, 615, 1147, 1179
AluBI AGCT 5 cut(s) 349, 479, 833, 1109, 1158
AluI AGCT 5 cut(s) 349, 479, 833, 1109, 1158
Alw21I GWGCWC 4 cut(s) 170, 584, 835, 1018
Alw26I GTCTC 1 cut(s) 439
Alw44I GTGCAC 1 cut(s) 580
AlwI GGATC 5 cut(s) 238, 353, 366, 723, 736
Ama87I CYCGRG 1 cut(s) 1011
AoxI GGCC 2 cut(s) 36, 406
ApaLI GTGCAC 1 cut(s) 580
ApeKI GCWGC 3 cut(s) 234, 648, 689
ArsI GACNNNNNNTTYG 2 cut(s) 132, 164
AsiGI ACCGGT 1 cut(s) 464
AspLEI GCGC 3 cut(s) 27, 278, 284
AspS9I GGNCC 1 cut(s) 966
AsuC2I CCSGG 1 cut(s) 538
AsuHPI GGTGA 5 cut(s) 196, 247, 479, 946, 1108
AvaI CYCGRG 1 cut(s) 1011
AvaII GGWCC 1 cut(s) 966
BaeGI GKGCMC 1 cut(s) 584
BamHI GGATCC 2 cut(s) 358, 728
BanI GGYRCC 1 cut(s) 24
BanII GRGCYC 1 cut(s) 835
BauI CACGAG 1 cut(s) 76
BbrPI CACGTG 1 cut(s) 230
Bbv12I GWGCWC 4 cut(s) 170, 584, 835, 1018
BbvI GCAGC 3 cut(s) 221, 635, 676
BccI CCATC 4 cut(s) 40, 823, 1079, 1106
BceAI ACGGC 3 cut(s) 421, 546, 702
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciT130I CCWGG 2 cut(s) 67, 135
BciVI GTATCC 1 cut(s) 1110
BclI TGATCA 1 cut(s) 1179
BcnI CCSGG 1 cut(s) 538
BcoDI GTCTC 1 cut(s) 439
BfaI CTAG 6 cut(s) 273, 383, 419, 542, 603, 1080
BfmI CTRYAG 1 cut(s) 390
BfoI RGCGCY 3 cut(s) 28, 279, 285
BfuI GTATCC 1 cut(s) 1110
BglII AGATCT 2 cut(s) 117, 298
BisI GCNGC 3 cut(s) 235, 649, 690
BlsI GCNGC 3 cut(s) 236, 650, 691
Bme1390I CCNGG 3 cut(s) 67, 135, 538
Bme18I GGWCC 1 cut(s) 966
BmeT110I CYCGRG 1 cut(s) 1011
BmgT120I GGNCC 1 cut(s) 966
BmiI GGNNCC 5 cut(s) 26, 188, 360, 730, 1052
BmrFI CCNGG 3 cut(s) 67, 135, 538
BpuMI CCSGG 1 cut(s) 538
BsaAI YACGTR 3 cut(s) 163, 230, 431
BsaBI GATNNNNATC 1 cut(s) 852
BsaHI GRCGYC 1 cut(s) 25
BsaJI CCNNGG 3 cut(s) 133, 247, 353
BsaWI WCCGGW 1 cut(s) 464
BsaXI ACNNNNNCTCC 2 cut(s) 201, 231
Bsc4I CCNNNNNNNGG 7 cut(s) 34, 377, 464, 543, 596, 738, 843
Bse118I RCCGGY 2 cut(s) 21, 464
Bse1I ACTGG 4 cut(s) 151, 743, 1023, 1098
Bse3DI GCAATG 3 cut(s) 348, 627, 636
Bse8I GATNNNNATC 1 cut(s) 852
BseBI CCWGG 2 cut(s) 67, 135
BseDI CCNNGG 3 cut(s) 133, 247, 353
BseGI GGATG 1 cut(s) 815
BseJI GATNNNNATC 1 cut(s) 852
BseLI CCNNNNNNNGG 7 cut(s) 34, 377, 464, 543, 596, 738, 843
BseMI GCAATG 3 cut(s) 348, 627, 636
BseMII CTCAG 1 cut(s) 506
BseNI ACTGG 4 cut(s) 151, 743, 1023, 1098
BseRI GAGGAG 3 cut(s) 401, 626, 629
BseSI GKGCMC 1 cut(s) 584
BseXI GCAGC 3 cut(s) 221, 635, 676
BseYI CCCAGC 1 cut(s) 692
BshFI GGCC 2 cut(s) 38, 408
BshNI GGYRCC 1 cut(s) 24
BshTI ACCGGT 1 cut(s) 464
BsiHKAI GWGCWC 4 cut(s) 170, 584, 835, 1018
BsiHKCI CYCGRG 1 cut(s) 1011
BsiSI CCGG 3 cut(s) 22, 465, 537
BslFI GGGAC 3 cut(s) 537, 932, 1104
BslI CCNNNNNNNGG 7 cut(s) 34, 377, 464, 543, 596, 738, 843
BsmAI GTCTC 1 cut(s) 439
BsmFI GGGAC 3 cut(s) 537, 932, 1104
BsmI GAATGC 1 cut(s) 67
BsnI GGCC 2 cut(s) 38, 408
BsoBI CYCGRG 1 cut(s) 1011
Bsp1286I GDGCHC 4 cut(s) 170, 584, 835, 1018
Bsp1407I TGTACA 1 cut(s) 1025
Bsp143I GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
BspACI CCGC 3 cut(s) 113, 651, 827
BspANI GGCC 2 cut(s) 38, 408
BspCNI CTCAG 1 cut(s) 507
BspLI GGNNCC 5 cut(s) 26, 188, 360, 730, 1052
BspPI GGATC 5 cut(s) 238, 353, 366, 723, 736
BspQI GCTCTTC 1 cut(s) 486
BspT107I GGYRCC 1 cut(s) 24
BsrDI GCAATG 3 cut(s) 348, 627, 636
BsrFI RCCGGY 2 cut(s) 21, 464
BsrGI TGTACA 1 cut(s) 1025
BsrI ACTGG 4 cut(s) 151, 743, 1023, 1098
BssAI RCCGGY 2 cut(s) 21, 464
BssECI CCNNGG 3 cut(s) 133, 247, 353
BssMI GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
BssNI GRCGYC 1 cut(s) 25
BssSI CACGAG 1 cut(s) 76
Bst2BI CACGAG 1 cut(s) 76
Bst2UI CCWGG 2 cut(s) 67, 135
Bst4CI ACNGT 3 cut(s) 391, 579, 643
Bst6I CTCTTC 1 cut(s) 486
BstACI GRCGYC 1 cut(s) 25
BstAUI TGTACA 1 cut(s) 1025
BstBAI YACGTR 3 cut(s) 163, 230, 431
BstC8I GCNNGC 3 cut(s) 23, 185, 280
BstDEI CTNAG 2 cut(s) 515, 1191
BstDSI CCRYGG 1 cut(s) 247
BstF5I GGATG 1 cut(s) 815
BstH2I RGCGCY 3 cut(s) 28, 279, 285
BstHHI GCGC 3 cut(s) 27, 278, 284
BstKTI GATC 7 cut(s) 120, 246, 301, 361, 731, 856, 1182
BstMAI GTCTC 1 cut(s) 439
BstMBI GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
BstMWI GCNNNNNNNGC 2 cut(s) 184, 626
BstNI CCWGG 2 cut(s) 67, 135
BstSCI CCNGG 3 cut(s) 65, 133, 536
BstSFI CTRYAG 1 cut(s) 390
BstSLI GKGCMC 1 cut(s) 584
BstV1I GCAGC 3 cut(s) 221, 635, 676
BstX2I RGATCY 4 cut(s) 117, 298, 358, 728
BstYI RGATCY 4 cut(s) 117, 298, 358, 728
BsuI GTATCC 1 cut(s) 1110
BsuRI GGCC 2 cut(s) 38, 408
BtgI CCRYGG 1 cut(s) 247
BtgZI GCGATG 1 cut(s) 1098
BtsCI GGATG 1 cut(s) 815
BtsIMutI CAGTG 4 cut(s) 158, 387, 736, 1016
Cac8I GCNNGC 3 cut(s) 23, 185, 280
CfoI GCGC 3 cut(s) 27, 278, 284
Cfr10I RCCGGY 2 cut(s) 21, 464
Cfr13I GGNCC 1 cut(s) 966
Csp6I GTAC 4 cut(s) 160, 575, 1026, 1188
CspAI ACCGGT 1 cut(s) 464
CviQI GTAC 4 cut(s) 160, 575, 1026, 1188
DdeI CTNAG 2 cut(s) 515, 1191
DinI GGCGCC 1 cut(s) 26
DpnI GATC 7 cut(s) 119, 245, 300, 360, 730, 855, 1181
DpnII GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 486
EarI CTCTTC 1 cut(s) 486
Ecl136II GAGCTC 1 cut(s) 833
Eco24I GRGCYC 1 cut(s) 835
Eco47I GGWCC 1 cut(s) 966
Eco53kI GAGCTC 1 cut(s) 833
Eco72I CACGTG 1 cut(s) 230
Eco88I CYCGRG 1 cut(s) 1011
EcoICRI GAGCTC 1 cut(s) 833
EcoRII CCWGG 2 cut(s) 65, 133
EcoT22I ATGCAT 1 cut(s) 528
EcoT38I GRGCYC 1 cut(s) 835
EgeI GGCGCC 1 cut(s) 26
EheI GGCGCC 1 cut(s) 26
FaqI GGGAC 3 cut(s) 537, 932, 1104
FauI CCCGC 1 cut(s) 820
FauNDI CATATG 2 cut(s) 522, 528
FbaI TGATCA 1 cut(s) 1179
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 3 cut(s) 235, 649, 690
FokI GGATG 1 cut(s) 802
FriOI GRGCYC 1 cut(s) 835
Fsp4HI GCNGC 3 cut(s) 235, 649, 690
FspBI CTAG 6 cut(s) 273, 383, 419, 542, 603, 1080
GlaI GCGC 3 cut(s) 26, 277, 283
GluI GCNGC 3 cut(s) 235, 649, 690
GsaI CCCAGC 1 cut(s) 696
HaeII RGCGCY 3 cut(s) 28, 279, 285
HaeIII GGCC 2 cut(s) 38, 408
HapII CCGG 3 cut(s) 22, 465, 537
HhaI GCGC 3 cut(s) 27, 278, 284
Hin1I GRCGYC 1 cut(s) 25
Hin6I GCGC 3 cut(s) 25, 276, 282
HinP1I GCGC 3 cut(s) 25, 276, 282
HincII GTYRAC 2 cut(s) 334, 892
HindII GTYRAC 2 cut(s) 334, 892
HindIII AAGCTT 2 cut(s) 347, 1156
HinfI GANTC 5 cut(s) 129, 364, 470, 959, 1102
HpaI GTTAAC 1 cut(s) 892
HpaII CCGG 3 cut(s) 22, 465, 537
HphI GGTGA 5 cut(s) 196, 247, 479, 946, 1108
Hpy166II GTNNAC 3 cut(s) 334, 582, 892
Hpy188I TCNGA 4 cut(s) 354, 363, 723, 986
Hpy188III TCNNGA 3 cut(s) 241, 292, 302
Hpy8I GTNNAC 3 cut(s) 334, 582, 892
Hpy99I CGWCG 1 cut(s) 338
HpyAV CCTTC 3 cut(s) 298, 743, 1028
HpyCH4III ACNGT 3 cut(s) 391, 579, 643
HpyCH4IV ACGT 4 cut(s) 162, 229, 336, 430
HpyCH4V TGCA 7 cut(s) 81, 124, 156, 341, 402, 526, 582
HpyF10VI GCNNNNNNNGC 2 cut(s) 184, 626
HpyF3I CTNAG 2 cut(s) 515, 1191
HpySE526I ACGT 4 cut(s) 162, 229, 336, 430
Hsp92I GRCGYC 1 cut(s) 25
HspAI GCGC 3 cut(s) 25, 276, 282
KasI GGCGCC 1 cut(s) 24
KroI GCCGGC 1 cut(s) 21
KroNI GCCGGC 1 cut(s) 23
Ksp22I TGATCA 1 cut(s) 1179
KspAI GTTAAC 1 cut(s) 892
Kzo9I GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
LguI GCTCTTC 1 cut(s) 486
LmnI GCTCC 3 cut(s) 192, 830, 838
Lsp1109I GCAGC 3 cut(s) 221, 635, 676
MaeI CTAG 6 cut(s) 273, 383, 419, 542, 603, 1080
MaeII ACGT 4 cut(s) 162, 229, 336, 430
MalI GATC 7 cut(s) 119, 245, 300, 360, 730, 855, 1181
MboI GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
MboII GAAGA 2 cut(s) 473, 1005
MflI RGATCY 4 cut(s) 117, 298, 358, 728
MhlI GDGCHC 4 cut(s) 170, 584, 835, 1018
MluCI AATT 1 cut(s) 809
Mly113I GGCGCC 1 cut(s) 25
MlyI GAGTC 3 cut(s) 123, 479, 968
MmeI TCCRAC 3 cut(s) 509, 638, 829
Mph1103I ATGCAT 1 cut(s) 528
MroNI GCCGGC 1 cut(s) 21
MseI TTAA 4 cut(s) 107, 891, 1124, 1170
MslI CAYNNNNRTG 1 cut(s) 1021
MspA1I CMGCKG 1 cut(s) 113
MspI CCGG 3 cut(s) 22, 465, 537
MspR9I CCNGG 3 cut(s) 67, 135, 538
Mva1269I GAATGC 1 cut(s) 67
MvaI CCWGG 2 cut(s) 67, 135
MwoI GCNNNNNNNGC 2 cut(s) 184, 626
NaeI GCCGGC 1 cut(s) 23
NarI GGCGCC 1 cut(s) 25
NciI CCSGG 1 cut(s) 538
NdeI CATATG 2 cut(s) 522, 528
NdeII GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
NgoMIV GCCGGC 1 cut(s) 21
NlaIV GGNNCC 5 cut(s) 26, 188, 360, 730, 1052
NsiI ATGCAT 1 cut(s) 528
PaeR7I CTCGAG 1 cut(s) 1011
PciSI GCTCTTC 1 cut(s) 486
PctI GAATGC 1 cut(s) 67
PdiI GCCGGC 1 cut(s) 23
PfeI GAWTC 2 cut(s) 364, 1102
PflMI CCANNNNNTGG 1 cut(s) 377
PinAI ACCGGT 1 cut(s) 464
PkrI GCNGC 3 cut(s) 236, 650, 691
PleI GAGTC 3 cut(s) 123, 478, 967
PluTI GGCGCC 1 cut(s) 28
PmaCI CACGTG 1 cut(s) 230
PmlI CACGTG 1 cut(s) 230
PpsI GAGTC 3 cut(s) 123, 478, 967
Ppu21I YACGTR 3 cut(s) 163, 230, 431
PsiI TTATAA 1 cut(s) 678
Psp124BI GAGCTC 1 cut(s) 835
Psp6I CCWGG 2 cut(s) 65, 133
PspCI CACGTG 1 cut(s) 230
PspFI CCCAGC 1 cut(s) 692
PspGI CCWGG 2 cut(s) 65, 133
PspN4I GGNNCC 5 cut(s) 26, 188, 360, 730, 1052
PspPI GGNCC 1 cut(s) 966
PspXI VCTCGAGB 1 cut(s) 1011
PsuI RGATCY 4 cut(s) 117, 298, 358, 728
RsaI GTAC 4 cut(s) 161, 576, 1027, 1189
RsaNI GTAC 4 cut(s) 160, 575, 1026, 1188
RseI CAYNNNNRTG 1 cut(s) 1021
SacI GAGCTC 1 cut(s) 835
SalI GTCGAC 1 cut(s) 332
SapI GCTCTTC 1 cut(s) 486
SaqAI TTAA 4 cut(s) 107, 891, 1124, 1170
SatI GCNGC 3 cut(s) 235, 649, 690
Sau3AI GATC 7 cut(s) 117, 243, 298, 358, 728, 853, 1179
Sau96I GGNCC 1 cut(s) 966
SchI GAGTC 3 cut(s) 123, 479, 968
ScrFI CCNGG 3 cut(s) 67, 135, 538
SduI GDGCHC 4 cut(s) 170, 584, 835, 1018
SfcI CTRYAG 1 cut(s) 390
SfoI GGCGCC 1 cut(s) 26
Sfr274I CTCGAG 1 cut(s) 1011
SinI GGWCC 1 cut(s) 966
SlaI CTCGAG 1 cut(s) 1011
SmiMI CAYNNNNRTG 1 cut(s) 1021
SmlI CTYRAG 1 cut(s) 1011
SmoI CTYRAG 1 cut(s) 1011
Sse9I AATT 1 cut(s) 809
SsiI CCGC 3 cut(s) 113, 651, 827
SspDI GGCGCC 1 cut(s) 24
SspI AATATT 3 cut(s) 85, 443, 1044
SspMI CTAG 6 cut(s) 273, 383, 419, 542, 603, 1080
SstI GAGCTC 1 cut(s) 835
StyD4I CCNGG 3 cut(s) 65, 133, 536
TaaI ACNGT 3 cut(s) 391, 579, 643
TaiI ACGT 4 cut(s) 165, 232, 339, 433
TaqI TCGA 6 cut(s) 303, 320, 333, 770, 905, 1012
TasI AATT 1 cut(s) 809
TatI WGTACW 1 cut(s) 1025
TfiI GAWTC 2 cut(s) 364, 1102
Tru1I TTAA 4 cut(s) 107, 891, 1124, 1170
Tru9I TTAA 4 cut(s) 107, 891, 1124, 1170
TscAI CASTG 4 cut(s) 158, 394, 743, 1023
TseI GCWGC 3 cut(s) 234, 648, 689
TspDTI ATGAA 4 cut(s) 17, 359, 953, 1074
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 4 cut(s) 158, 394, 743, 1023
Van91I CCANNNNNTGG 1 cut(s) 377
VneI GTGCAC 1 cut(s) 580
VpaK11BI GGWCC 1 cut(s) 966
XcmI CCANNNNNNNNNTGG 1 cut(s) 1015
XhoI CTCGAG 1 cut(s) 1011
XmiI GTMKAC 1 cut(s) 333
XspI CTAG 6 cut(s) 273, 383, 419, 542, 603, 1080
Zsp2I ATGCAT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.