Rmu_sc0003961.1_g000002

F-box protein At3g07870-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003961.1
OG0000430
Physical Location & Seq
Forward (+)
4361 .. 7270
2910 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003961.1_g000002.1.cds

Sequence Viewer

Length: 1971 bp
atgattcttcggaggatcctccaatcgactagtagtggcgaggctattcgttgtgggaatgtggcgatgagggcactggcagtccctttgctcgtgtttctcttcattgttggttggtgtggagaagatctgagtcgatgttcatcttcgacctcagatcgaccaccagatgtcggcacggtgacggggatggtcagattatgtggccgaggatgtcatcacctggatcgtttgtcggggacggcgcgatctgggatggagggtgtgctgattccagccgtgcggccatcggaggtgcaacaaggagcagcggtggtaccggttctttgcttcggcgcttggtcctgccttgattgggtgccaatatcagatttttgggtgcccagtataaggttatgggcttgggagctgggctggctttgggccaacaacagagcccagtggttgggcttgatttctccacatatttggatttgggacccaggcggtggtttgggtacttgcttgctcaaatgtgttcttataatttcaggtgtgttgtgcttacgtgcagacagattcctcattgctatattctataaaagatcttggaataatcatgctgtgagtaccacaattgagtgcctggcgagcagtgttaattgtgctgggatgaacatagtcttgattcatcaactgatctcttgcatgcccgagttacagattatgatgatttggtctccaaacctcaaggtcatggcaatggtctcattgttgatctcatactcagccgttacatttagaactttcccctctccagccatgaagaaaatcaaactcaagcatacccaccaagcaaccaacactgaccaacaagaagaagagcatgataatcaatccgatattttccaacttccaaactacataatactggagatcctctccagaatcccaatcaaatccctcatccaatgccgctctgtgtgcaagtcatggcgtcattcactctcggactcccacttcaccaagtctctattttcccaaacacccacttgcattttgctccagaatagcagcaccatcaacccaaaatccccaagcctcttcttgattgatctagacaaggcctccggcaggaacgacgtcgtaattaggctctcaaaagaccctaatgtcccaactcggggagtgcaagttgtgggttcctgcaatggcctgctctgcgtgtatgataggctcaactgtggccaactttatatctccaaccccattatcggtgagtctttaacacttccagcacctagtatggaaattgattatcagtttgtttgtgggtttggattttgtcctagttatgaggtttataaagtagttgtggttacttctccaagtgaaggaactgatcatggagagttgaaggttttgactgttgggtctggggtttggagaagcattgggaattgtgtgtaccattttgggtaccaaccatatggggtttatctgaatggggttcttcattggattgttcaaactagtgagggttctgtttcgatttgtgcctttgacattgaaaatgagagtttccgagagctgccaccgccgccttgttgtttgaaaaaatgtgtcattagcattggagtcctggaaggttggctctctgtgtttgttcggtccggaagtaacatcaatgtgtggatgatgaaagattatggggttgaggagtcttggaccaaagagcttgttgtcaaagaaaaatcgtcaggcatgattgggaaattgtttggtcactggactcgatcttcttctgctgctcaagtgttgaagtttacaaagaaggggcaagtcttgctgttggataagtataaactgcatgtttatactcctgggaaaagaggttttgtaccacttgagattgatggggtaccatatatggttgaagcatttgcccatattcctagctttatttcgcttgccaatgccataaggggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

656

Amino Acids

72.73

Weight (kDa)

8.46

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000430)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g34920 FvH4_3g37340 FvH4_4g12931 FvH4_4g13090 FvH4_4g13100 FvH4_6g33904 FvH4_6g39874
malus_domestica MD04G1018800.v1.1 MD04G1020000.v1.1 MD04G1020500.v1.1 MD04G1021100.v1.1
prunus_persica Prupe.1G167600_v2.0.a1 Prupe.1G167800_v2.0.a1 Prupe.1G167900_v2.0.a1 Prupe.1G168000_v2.0.a1 Prupe.1G168100_v2.0.a1 Prupe.1G169600_v2.0.a1 Prupe.1G169800_v2.0.a1 Prupe.1G169900_v2.0.a1 Prupe.1G170000_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G187600_v2.0.a1
pyrus_communis pycom04g01610 pycom04g01630 pycom04g01660
rosa_chinensis RchiOBHm_Chr3g0474061 RchiOBHm_Chr3g0474071 RchiOBHm_Chr3g0494781 RchiOBHm_Chr4g0412631 RchiOBHm_Chr4g0412831 RchiOBHm_Chr4g0412861
rosa_laevigata RLG00000008252 RLG00000008255 RLG00000008272 RLG00000023952 RLG00000026909 RLG00000026910
rosa_multiflora Rmu_co8499129.1_g000001 Rmu_sc0001755.1_g000010 Rmu_sc0001755.1_g000011 Rmu_sc0002068.1_g000006 Rmu_sc0002072.1_g000048 Rmu_sc0002878.1_g000004 Rmu_sc0003022.1_g000007 Rmu_sc0003961.1_g000002 Rmu_sc0010735.1_g000006 Rmu_sc0016141.1_g000002
rosa_roxburghii Rroxscaffold_3G00261940 Rroxscaffold_4G00285070 Rroxscaffold_5G00356800 Rroxscaffold_5G00357100 Rroxscaffold_5G00357120 Rroxscaffold_6G00407500
rosa_rugosa Rorug01G0370900 Rorug03G0138300 Rorug03G0138700 Rorug04G0117100 Rorug04G0117200 Rorug04G0117300 Rorug04G0117300 Rorug07G0011200
rosa_samantha Rh1AG379300 Rh1BG342700 Rh1BG342800 Rh1BG384500 Rh1BG384800 Rh1CG356400 Rh1CG398400 Rh1CG398800 Rh1DG374100 Rh1DG415800 Rh1DG416000 Rh3AG188500 Rh3BG217500 Rh3BG217700 Rh3CG213400 Rh3CG213600 Rh4AG174500 Rh4AG175800 Rh4AG175900 Rh4AG176000 Rh4BG176100 Rh4BG176400 Rh4CG185400 Rh4CG186900 Rh4CG187100 Rh4DG172900 Rh4DG173100 Rh7AG137700 Rh7BG138000 Rh7CG141600
rosa_wichuraiana Rw4G014620 Rw4G014750 Rw4G014760 Rw4G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 524, 1344
AasI GACNNNNNNGTC 2 cut(s) 1151, 1411
AatII GACGTC 1 cut(s) 1125
Acc65I GGTACC 3 cut(s) 316, 1458, 1900
AccB1I GGYRCC 5 cut(s) 316, 358, 379, 1458, 1900
AccB7I CCANNNNNTGG 2 cut(s) 445, 488
AccBSI CCGCTC 1 cut(s) 957
AccII CGCG 1 cut(s) 247
AccIII TCCGGA 1 cut(s) 1652
AciI CCGC 6 cut(s) 283, 311, 486, 955, 1577, 1580
AclWI GGATC 4 cut(s) 10, 23, 234, 910
AcoI YGGCCR 3 cut(s) 205, 284, 1225
AcyI GRCGYC 2 cut(s) 976, 1122
AfaI GTAC 7 cut(s) 318, 499, 610, 1448, 1460, 1881, 1902
AgeI ACCGGT 1 cut(s) 319
AgsI TTSAA 6 cut(s) 1396, 1508, 1550, 1594, 1801, 1916
AhlI ACTAGT 2 cut(s) 29, 1511
AjnI CCWGG 5 cut(s) 222, 481, 624, 1620, 1861
AluBI AGCT 4 cut(s) 409, 1570, 1717, 1938
AluI AGCT 4 cut(s) 409, 1570, 1717, 1938
Alw26I GTCTC 3 cut(s) 723, 751, 1014
AlwI GGATC 4 cut(s) 10, 23, 234, 910
Ama87I CYCGRG 2 cut(s) 692, 1161
Aor13HI TCCGGA 1 cut(s) 1652
AoxI GGCC 6 cut(s) 205, 284, 423, 1104, 1192, 1225
ApeKI GCWGC 4 cut(s) 308, 1053, 1570, 1787
AsiGI ACCGGT 1 cut(s) 319
Asp718I GGTACC 3 cut(s) 316, 1458, 1900
AspLEI GCGC 2 cut(s) 247, 338
AspS9I GGNCC 5 cut(s) 342, 423, 478, 1650, 1707
AsuHPI GGTGA 4 cut(s) 193, 212, 994, 1268
AvaI CYCGRG 2 cut(s) 692, 1161
AvaII GGWCC 4 cut(s) 342, 478, 1650, 1707
BaeGI GKGCMC 2 cut(s) 76, 384
BalI TGGCCA 1 cut(s) 1227
BamHI GGATCC 1 cut(s) 15
BanI GGYRCC 5 cut(s) 316, 358, 379, 1458, 1900
BanII GRGCYC 1 cut(s) 439
BauI CACGAG 1 cut(s) 92
BbvI GCAGC 4 cut(s) 320, 1065, 1557, 1774
BccI CCATC 5 cut(s) 184, 250, 295, 1067, 1889
BceAI ACGGC 3 cut(s) 258, 263, 755
BciT130I CCWGG 5 cut(s) 224, 483, 626, 1622, 1863
BclI TGATCA 1 cut(s) 1381
BcoDI GTCTC 3 cut(s) 723, 751, 1014
BcuI ACTAGT 2 cut(s) 29, 1511
BfaI CTAG 6 cut(s) 30, 1097, 1281, 1329, 1512, 1935
BfoI RGCGCY 1 cut(s) 339
BglII AGATCT 2 cut(s) 127, 584
BisI GCNGC 7 cut(s) 284, 309, 955, 1054, 1571, 1580, 1788
BlsI GCNGC 7 cut(s) 285, 310, 956, 1055, 1572, 1581, 1789
Bme1390I CCNGG 5 cut(s) 224, 483, 626, 1622, 1863
Bme18I GGWCC 4 cut(s) 342, 478, 1650, 1707
BmeT110I CYCGRG 2 cut(s) 692, 1161
BmgT120I GGNCC 5 cut(s) 342, 423, 478, 1650, 1707
BmiI GGNNCC 9 cut(s) 17, 318, 360, 381, 479, 480, 1183, 1460, 1902
BmrFI CCNGG 5 cut(s) 224, 483, 626, 1622, 1863
BmrI ACTGGG 2 cut(s) 378, 433
BmuI ACTGGG 2 cut(s) 378, 433
BplI GAGNNNNNCTC 2 cut(s) 905, 937
BpmI CTGGAG 4 cut(s) 780, 907, 932, 1028
BpuEI CTTGAG 4 cut(s) 713, 803, 1776, 1907
BsaAI YACGTR 1 cut(s) 548
BsaBI GATNNNNATC 1 cut(s) 142
BsaHI GRCGYC 2 cut(s) 976, 1122
BsaI GGTCTC 2 cut(s) 723, 751
BsaJI CCNNGG 3 cut(s) 208, 481, 1862
BsaWI WCCGGW 2 cut(s) 319, 1652
BsaXI ACNNNNNCTCC 6 cut(s) 297, 327, 1091, 1121, 1158, 1188
Bse118I RCCGGY 1 cut(s) 319
Bse1I ACTGG 5 cut(s) 81, 384, 439, 915, 1772
Bse3DI GCAATG 3 cut(s) 564, 747, 1195
Bse8I GATNNNNATC 1 cut(s) 142
BseAI TCCGGA 1 cut(s) 1652
BseBI CCWGG 5 cut(s) 224, 483, 626, 1622, 1863
BseDI CCNNGG 3 cut(s) 208, 481, 1862
BseGI GGATG 6 cut(s) 195, 218, 261, 657, 945, 1680
BseJI GATNNNNATC 1 cut(s) 142
BseMI GCAATG 3 cut(s) 564, 747, 1195
BseMII CTCAG 3 cut(s) 122, 168, 780
BseNI ACTGG 5 cut(s) 81, 384, 439, 915, 1772
BseRI GAGGAG 1 cut(s) 1712
BseSI GKGCMC 2 cut(s) 76, 384
BseXI GCAGC 4 cut(s) 320, 1065, 1557, 1774
BseYI CCCAGC 2 cut(s) 409, 647
BsgI GTGCAG 1 cut(s) 570
Bsh1236I CGCG 1 cut(s) 247
BshFI GGCC 6 cut(s) 207, 286, 425, 1106, 1194, 1227
BshNI GGYRCC 5 cut(s) 316, 358, 379, 1458, 1900
BshTI ACCGGT 1 cut(s) 319
BsiHKCI CYCGRG 2 cut(s) 692, 1161
BsiSI CCGG 3 cut(s) 320, 1110, 1653
BslFI GGGAC 4 cut(s) 68, 253, 491, 1139
BsmAI GTCTC 3 cut(s) 723, 751, 1014
BsmFI GGGAC 4 cut(s) 68, 253, 491, 1139
BsnI GGCC 6 cut(s) 207, 286, 425, 1106, 1194, 1227
Bso31I GGTCTC 2 cut(s) 723, 751
BsoBI CYCGRG 2 cut(s) 692, 1161
Bsp1286I GDGCHC 3 cut(s) 76, 384, 439
Bsp13I TCCGGA 1 cut(s) 1652
BspACI CCGC 6 cut(s) 283, 311, 486, 955, 1577, 1580
BspANI GGCC 6 cut(s) 207, 286, 425, 1106, 1194, 1227
BspCNI CTCAG 3 cut(s) 123, 167, 779
BspEI TCCGGA 1 cut(s) 1652
BspFNI CGCG 1 cut(s) 247
BspLI GGNNCC 9 cut(s) 17, 318, 360, 381, 479, 480, 1183, 1460, 1902
BspPI GGATC 4 cut(s) 10, 23, 234, 910
BspQI GCTCTTC 1 cut(s) 855
BspT107I GGYRCC 5 cut(s) 316, 358, 379, 1458, 1900
BspTNI GGTCTC 2 cut(s) 723, 751
BsrBI CCGCTC 1 cut(s) 957
BsrDI GCAATG 3 cut(s) 564, 747, 1195
BsrFI RCCGGY 1 cut(s) 319
BsrI ACTGG 5 cut(s) 81, 384, 439, 915, 1772
BssAI RCCGGY 1 cut(s) 319
BssECI CCNNGG 3 cut(s) 208, 481, 1862
BssNI GRCGYC 2 cut(s) 976, 1122
BssSI CACGAG 1 cut(s) 92
Bst2BI CACGAG 1 cut(s) 92
Bst2UI CCWGG 5 cut(s) 224, 483, 626, 1622, 1863
Bst4CI ACNGT 3 cut(s) 181, 1223, 1408
Bst6I CTCTTC 3 cut(s) 107, 855, 1088
BstACI GRCGYC 2 cut(s) 976, 1122
BstAPI GCANNNNNTGC 1 cut(s) 1825
BstBAI YACGTR 1 cut(s) 548
BstC8I GCNNGC 6 cut(s) 416, 506, 631, 689, 1196, 1950
BstDEI CTNAG 3 cut(s) 131, 154, 766
BstENI CCTNNNNNAGG 1 cut(s) 1111
BstF5I GGATG 6 cut(s) 195, 218, 261, 657, 945, 1680
BstFNI CGCG 1 cut(s) 247
BstH2I RGCGCY 1 cut(s) 339
BstHHI GCGC 2 cut(s) 247, 338
BstMAI GTCTC 3 cut(s) 723, 751, 1014
BstMWI GCNNNNNNNGC 8 cut(s) 71, 415, 630, 963, 1200, 1576, 1579, 1825
BstNI CCWGG 5 cut(s) 224, 483, 626, 1622, 1863
BstNSI RCATGY 2 cut(s) 691, 1853
BstSCI CCNGG 5 cut(s) 222, 481, 624, 1620, 1861
BstSLI GKGCMC 2 cut(s) 76, 384
BstUI CGCG 1 cut(s) 247
BstV1I GCAGC 4 cut(s) 320, 1065, 1557, 1774
BstX2I RGATCY 4 cut(s) 15, 127, 584, 915
BstXI CCANNNNNNTGG 2 cut(s) 468, 1469
BstYI RGATCY 4 cut(s) 15, 127, 584, 915
BsuRI GGCC 6 cut(s) 207, 286, 425, 1106, 1194, 1227
BtgZI GCGATG 1 cut(s) 80
BtsCI GGATG 6 cut(s) 195, 218, 261, 657, 945, 1680
BtsI GCAGTG 1 cut(s) 640
BtsIMutI CAGTG 5 cut(s) 74, 446, 640, 843, 1765
Cac8I GCNNGC 6 cut(s) 416, 506, 631, 689, 1196, 1950
CfoI GCGC 2 cut(s) 247, 338
Cfr10I RCCGGY 1 cut(s) 319
Cfr13I GGNCC 5 cut(s) 342, 423, 478, 1650, 1707
CpoI CGGWCCG 1 cut(s) 1650
CseI GACGC 1 cut(s) 965
Csp6I GTAC 7 cut(s) 317, 498, 609, 1447, 1459, 1880, 1901
CspAI ACCGGT 1 cut(s) 319
CspI CGGWCCG 1 cut(s) 1650
CviAII CATG 9 cut(s) 599, 688, 736, 802, 866, 972, 1385, 1744, 1850
CviQI GTAC 7 cut(s) 317, 498, 609, 1447, 1459, 1880, 1901
DdeI CTNAG 3 cut(s) 131, 154, 766
DrdI GACNNNNNNGTC 2 cut(s) 1151, 1411
DseDI GACNNNNNNGTC 2 cut(s) 1151, 1411
EaeI YGGCCR 3 cut(s) 205, 284, 1225
Eam1104I CTCTTC 3 cut(s) 107, 855, 1088
EarI CTCTTC 3 cut(s) 107, 855, 1088
Eco147I AGGCCT 1 cut(s) 1106
Eco24I GRGCYC 1 cut(s) 439
Eco31I GGTCTC 2 cut(s) 723, 751
Eco47I GGWCC 4 cut(s) 342, 478, 1650, 1707
Eco88I CYCGRG 2 cut(s) 692, 1161
EcoNI CCTNNNNNAGG 1 cut(s) 1111
EcoO109I RGGNCCY 1 cut(s) 478
EcoRII CCWGG 5 cut(s) 222, 481, 624, 1620, 1861
EcoT38I GRGCYC 1 cut(s) 439
FaeI CATG 9 cut(s) 602, 691, 739, 805, 869, 975, 1388, 1747, 1853
FaqI GGGAC 4 cut(s) 68, 253, 491, 1139
FatI CATG 9 cut(s) 598, 687, 735, 801, 865, 971, 1384, 1743, 1849
FauNDI CATATG 1 cut(s) 1468
FbaI TGATCA 1 cut(s) 1381
Fnu4HI GCNGC 7 cut(s) 284, 309, 955, 1054, 1571, 1580, 1788
FokI GGATG 6 cut(s) 202, 225, 268, 664, 932, 1687
FriOI GRGCYC 1 cut(s) 439
Fsp4HI GCNGC 7 cut(s) 284, 309, 955, 1054, 1571, 1580, 1788
FspBI CTAG 6 cut(s) 30, 1097, 1281, 1329, 1512, 1935
GlaI GCGC 2 cut(s) 246, 337
GluI GCNGC 7 cut(s) 284, 309, 955, 1054, 1571, 1580, 1788
GsaI CCCAGC 2 cut(s) 413, 651
GsuI CTGGAG 4 cut(s) 780, 907, 932, 1028
HaeII RGCGCY 1 cut(s) 339
HaeIII GGCC 6 cut(s) 207, 286, 425, 1106, 1194, 1227
HapII CCGG 3 cut(s) 320, 1110, 1653
HgaI GACGC 1 cut(s) 965
HhaI GCGC 2 cut(s) 247, 338
Hin1I GRCGYC 2 cut(s) 976, 1122
Hin1II CATG 9 cut(s) 602, 691, 739, 805, 869, 975, 1388, 1747, 1853
Hin6I GCGC 2 cut(s) 245, 336
HinP1I GCGC 2 cut(s) 245, 336
HpaII CCGG 3 cut(s) 320, 1110, 1653
HphI GGTGA 4 cut(s) 193, 212, 994, 1268
Hpy166II GTNNAC 2 cut(s) 1447, 1806
Hpy188III TCNNGA 6 cut(s) 664, 924, 1045, 1087, 1097, 1653
Hpy8I GTNNAC 2 cut(s) 1447, 1806
Hpy99I CGWCG 2 cut(s) 1124, 1127
HpyAV CCTTC 4 cut(s) 1367, 1390, 1619, 1807
HpyCH4III ACNGT 3 cut(s) 181, 1223, 1408
HpyCH4IV ACGT 2 cut(s) 547, 1122
HpyCH4V TGCA 8 cut(s) 298, 551, 687, 966, 1035, 1171, 1188, 1849
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 415, 630, 963, 1200, 1576, 1579, 1825
HpyF3I CTNAG 3 cut(s) 131, 154, 766
HpySE526I ACGT 2 cut(s) 547, 1122
Hsp92I GRCGYC 2 cut(s) 976, 1122
Hsp92II CATG 9 cut(s) 602, 691, 739, 805, 869, 975, 1388, 1747, 1853
HspAI GCGC 2 cut(s) 245, 336
KflI GGGWCCC 1 cut(s) 478
Kpn2I TCCGGA 1 cut(s) 1652
KpnI GGTACC 3 cut(s) 320, 1462, 1904
Ksp22I TGATCA 1 cut(s) 1381
LguI GCTCTTC 1 cut(s) 855
LmnI GCTCC 3 cut(s) 305, 406, 1047
Lsp1109I GCAGC 4 cut(s) 320, 1065, 1557, 1774
MaeI CTAG 6 cut(s) 30, 1097, 1281, 1329, 1512, 1935
MaeII ACGT 2 cut(s) 547, 1122
MaeIII GTNAC 6 cut(s) 181, 696, 772, 1357, 1658, 1763
MbiI CCGCTC 1 cut(s) 957
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 4 cut(s) 15, 127, 584, 915
MhlI GDGCHC 3 cut(s) 76, 384, 439
MlsI TGGCCA 1 cut(s) 1227
MluCI AATT 7 cut(s) 525, 615, 640, 1128, 1290, 1438, 1754
MluNI TGGCCA 1 cut(s) 1227
MlyI GAGTC 6 cut(s) 142, 986, 1268, 1626, 1709, 1765
MmeI TCCRAC 3 cut(s) 913, 1266, 1812
Mox20I TGGCCA 1 cut(s) 1227
MroI TCCGGA 1 cut(s) 1652
MscI TGGCCA 1 cut(s) 1227
MseI TTAA 2 cut(s) 639, 1265
MslI CAYNNNNRTG 2 cut(s) 740, 1667
Msp20I TGGCCA 1 cut(s) 1227
MspA1I CMGCKG 1 cut(s) 311
MspI CCGG 3 cut(s) 320, 1110, 1653
MspR9I CCNGG 5 cut(s) 224, 483, 626, 1622, 1863
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 5 cut(s) 224, 483, 626, 1622, 1863
MvnI CGCG 1 cut(s) 247
MwoI GCNNNNNNNGC 8 cut(s) 71, 415, 630, 963, 1200, 1576, 1579, 1825
NdeI CATATG 1 cut(s) 1468
NlaIII CATG 9 cut(s) 602, 691, 739, 805, 869, 975, 1388, 1747, 1853
NlaIV GGNNCC 9 cut(s) 17, 318, 360, 381, 479, 480, 1183, 1460, 1902
NmeAIII GCCGAG 1 cut(s) 233
NmuCI GTSAC 2 cut(s) 181, 1763
NspI RCATGY 2 cut(s) 691, 1853
PaeI GCATGC 1 cut(s) 691
PceI AGGCCT 1 cut(s) 1106
PciSI GCTCTTC 1 cut(s) 855
PfeI GAWTC 5 cut(s) 4, 271, 558, 667, 927
PflMI CCANNNNNTGG 2 cut(s) 445, 488
PfoI TCCNGGA 1 cut(s) 1620
PinAI ACCGGT 1 cut(s) 319
PkrI GCNGC 7 cut(s) 285, 310, 956, 1055, 1572, 1581, 1789
PleI GAGTC 6 cut(s) 141, 986, 1267, 1625, 1708, 1765
PpsI GAGTC 6 cut(s) 141, 986, 1267, 1625, 1708, 1765
Ppu21I YACGTR 1 cut(s) 548
PpuMI RGGWCCY 1 cut(s) 478
PsiI TTATAA 2 cut(s) 524, 1344
Psp5II RGGWCCY 1 cut(s) 478
Psp6I CCWGG 5 cut(s) 222, 481, 624, 1620, 1861
PspFI CCCAGC 2 cut(s) 409, 647
PspGI CCWGG 5 cut(s) 222, 481, 624, 1620, 1861
PspN4I GGNNCC 9 cut(s) 17, 318, 360, 381, 479, 480, 1183, 1460, 1902
PspPI GGNCC 5 cut(s) 342, 423, 478, 1650, 1707
PspPPI RGGWCCY 1 cut(s) 478
PsuI RGATCY 4 cut(s) 15, 127, 584, 915
RsaI GTAC 7 cut(s) 318, 499, 610, 1448, 1460, 1881, 1902
RsaNI GTAC 7 cut(s) 317, 498, 609, 1447, 1459, 1880, 1901
RseI CAYNNNNRTG 2 cut(s) 740, 1667
Rsr2I CGGWCCG 1 cut(s) 1650
RsrII CGGWCCG 1 cut(s) 1650
SapI GCTCTTC 1 cut(s) 855
SaqAI TTAA 2 cut(s) 639, 1265
SatI GCNGC 7 cut(s) 284, 309, 955, 1054, 1571, 1580, 1788
Sau96I GGNCC 5 cut(s) 342, 423, 478, 1650, 1707
SchI GAGTC 6 cut(s) 142, 986, 1268, 1626, 1709, 1765
ScrFI CCNGG 5 cut(s) 224, 483, 626, 1622, 1863
SduI GDGCHC 3 cut(s) 76, 384, 439
SinI GGWCC 4 cut(s) 342, 478, 1650, 1707
SmiMI CAYNNNNRTG 2 cut(s) 740, 1667
SmlI CTYRAG 4 cut(s) 728, 818, 1791, 1886
SmoI CTYRAG 4 cut(s) 728, 818, 1791, 1886
SpeI ACTAGT 2 cut(s) 29, 1511
SphI GCATGC 1 cut(s) 691
Sse9I AATT 7 cut(s) 525, 615, 640, 1128, 1290, 1438, 1754
SseBI AGGCCT 1 cut(s) 1106
SsiI CCGC 6 cut(s) 283, 311, 486, 955, 1577, 1580
SspMI CTAG 6 cut(s) 30, 1097, 1281, 1329, 1512, 1935
StuI AGGCCT 1 cut(s) 1106
StyD4I CCNGG 5 cut(s) 222, 481, 624, 1620, 1861
TaaI ACNGT 3 cut(s) 181, 1223, 1408
TaiI ACGT 2 cut(s) 550, 1125
TaqI TCGA 6 cut(s) 26, 136, 149, 160, 1529, 1774
TaqII GACCGA 1 cut(s) 1638
TasI AATT 7 cut(s) 525, 615, 640, 1128, 1290, 1438, 1754
TauI GCSGC 3 cut(s) 286, 957, 1582
TfiI GAWTC 5 cut(s) 4, 271, 558, 667, 927
Tru1I TTAA 2 cut(s) 639, 1265
Tru9I TTAA 2 cut(s) 639, 1265
TscAI CASTG 5 cut(s) 81, 446, 640, 850, 1772
TseFI GTSAC 2 cut(s) 181, 1763
TseI GCWGC 4 cut(s) 308, 1053, 1570, 1787
Tsp45I GTSAC 2 cut(s) 181, 1763
TspDTI ATGAA 7 cut(s) 94, 132, 659, 668, 818, 1484, 1694
TspRI CASTG 5 cut(s) 81, 446, 640, 850, 1772
Van91I CCANNNNNTGG 2 cut(s) 445, 488
VpaK11BI GGWCC 4 cut(s) 342, 478, 1650, 1707
XagI CCTNNNNNAGG 1 cut(s) 1111
XbaI TCTAGA 1 cut(s) 1096
XceI RCATGY 2 cut(s) 691, 1853
XspI CTAG 6 cut(s) 30, 1097, 1281, 1329, 1512, 1935
ZraI GACGTC 1 cut(s) 1123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.