A Receptor for Ubiquitination Targets
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 46 - 85 | 7.7e-10 | F-box domain |
| F-box-like | PF12937 | 47 - 85 | 6.6e-10 | F-box-like |
| FBA_1 | PF07734 | 106 - 366 | 6.7e-21 | F-box associated beta propeller domain |
| FBA_3 | PF08268 | 129 - 332 | 7.8e-25 | F-box associated beta propeller domain |
| b-prop_At3g26010-like | PF24750 | 133 - 310 | 1.7e-07 | F-box protein At3g26010-like, beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1063 |
| AccB1I | GGYRCC | 1 cut(s) | 344 |
| AccI | GTMKAC | 1 cut(s) | 666 |
| AciI | CCGC | 3 cut(s) | 208, 307, 818 |
| AcsI | RAATTY | 1 cut(s) | 14 |
| AcuI | CTGAAG | 2 cut(s) | 761, 767 |
| AcyI | GRCGYC | 1 cut(s) | 345 |
| AfaI | GTAC | 1 cut(s) | 1011 |
| AfeI | AGCGCT | 1 cut(s) | 302 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 470, 498, 590 |
| AgsI | TTSAA | 1 cut(s) | 848 |
| AjiI | CACGTC | 1 cut(s) | 334 |
| AjnI | CCWGG | 2 cut(s) | 318, 491 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 840, 872, 1153, 1185 |
| AluBI | AGCT | 9 cut(s) | 312, 358, 660, 739, 745, 751, 856, 1069, 1164 |
| AluI | AGCT | 9 cut(s) | 312, 358, 660, 739, 745, 751, 856, 1069, 1164 |
| Alw26I | GTCTC | 2 cut(s) | 223, 881 |
| Ama87I | CYCGRG | 2 cut(s) | 851, 1014 |
| Aor51HI | AGCGCT | 1 cut(s) | 302 |
| AoxI | GGCC | 2 cut(s) | 494, 1096 |
| ApeKI | GCWGC | 5 cut(s) | 210, 303, 309, 657, 1069 |
| ApoI | RAATTY | 1 cut(s) | 14 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 236, 268, 578, 610 |
| AspLEI | GCGC | 2 cut(s) | 303, 347 |
| AspS9I | GGNCC | 3 cut(s) | 367, 951, 1096 |
| AsuC2I | CCSGG | 1 cut(s) | 838 |
| AsuHPI | GGTGA | 7 cut(s) | 81, 181, 373, 485, 614, 625, 931 |
| AsuII | TTCGAA | 1 cut(s) | 458 |
| AvaI | CYCGRG | 2 cut(s) | 851, 1014 |
| AvaII | GGWCC | 2 cut(s) | 367, 951 |
| BaeGI | GKGCMC | 1 cut(s) | 1044 |
| BanI | GGYRCC | 1 cut(s) | 344 |
| BanII | GRGCYC | 2 cut(s) | 330, 407 |
| BbvI | GCAGC | 5 cut(s) | 197, 290, 321, 669, 1056 |
| BccI | CCATC | 1 cut(s) | 610 |
| BceAI | ACGGC | 3 cut(s) | 332, 358, 410 |
| BciT130I | CCWGG | 2 cut(s) | 320, 493 |
| BcnI | CCSGG | 1 cut(s) | 838 |
| BcoDI | GTCTC | 2 cut(s) | 223, 881 |
| BfmI | CTRYAG | 1 cut(s) | 1070 |
| BfoI | RGCGCY | 2 cut(s) | 304, 348 |
| BfuAI | ACCTGC | 1 cut(s) | 1063 |
| BglII | AGATCT | 1 cut(s) | 168 |
| BisI | GCNGC | 7 cut(s) | 208, 211, 304, 307, 310, 658, 1070 |
| BlsI | GCNGC | 7 cut(s) | 209, 212, 305, 308, 311, 659, 1071 |
| Bme1390I | CCNGG | 3 cut(s) | 320, 493, 838 |
| Bme18I | GGWCC | 2 cut(s) | 367, 951 |
| BmeT110I | CYCGRG | 2 cut(s) | 851, 1014 |
| BmgBI | CACGTC | 1 cut(s) | 334 |
| BmgT120I | GGNCC | 3 cut(s) | 367, 951, 1096 |
| BmiI | GGNNCC | 4 cut(s) | 346, 369, 406, 1097 |
| BmrFI | CCNGG | 3 cut(s) | 320, 493, 838 |
| BmsI | GCATC | 1 cut(s) | 1113 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 158, 190, 220, 252, 861, 893 |
| Bpu14I | TTCGAA | 1 cut(s) | 458 |
| BpuEI | CTTGAG | 2 cut(s) | 773, 1130 |
| BpuMI | CCSGG | 1 cut(s) | 838 |
| BsaAI | YACGTR | 1 cut(s) | 1045 |
| BsaHI | GRCGYC | 1 cut(s) | 345 |
| BsaJI | CCNNGG | 3 cut(s) | 363, 491, 497 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 254, 284 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 470, 498, 590 |
| Bse1I | ACTGG | 1 cut(s) | 736 |
| Bse3DI | GCAATG | 1 cut(s) | 418 |
| BseBI | CCWGG | 2 cut(s) | 320, 493 |
| BseDI | CCNNGG | 3 cut(s) | 363, 491, 497 |
| BseGI | GGATG | 4 cut(s) | 135, 198, 1000, 1128 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 470, 498, 590 |
| BseMI | GCAATG | 1 cut(s) | 418 |
| BseMII | CTCAG | 1 cut(s) | 588 |
| BseNI | ACTGG | 1 cut(s) | 736 |
| BseRI | GAGGAG | 3 cut(s) | 257, 818, 1049 |
| BseSI | GKGCMC | 1 cut(s) | 1044 |
| BseXI | GCAGC | 5 cut(s) | 197, 290, 321, 669, 1056 |
| BshFI | GGCC | 2 cut(s) | 496, 1098 |
| BshNI | GGYRCC | 1 cut(s) | 344 |
| BsiHKCI | CYCGRG | 2 cut(s) | 851, 1014 |
| BsiSI | CCGG | 1 cut(s) | 837 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 470, 498, 590 |
| BsmAI | GTCTC | 2 cut(s) | 223, 881 |
| BsnI | GGCC | 2 cut(s) | 496, 1098 |
| BsoBI | CYCGRG | 2 cut(s) | 851, 1014 |
| Bsp119I | TTCGAA | 1 cut(s) | 458 |
| Bsp1286I | GDGCHC | 3 cut(s) | 330, 407, 1044 |
| Bsp143I | GATC | 1 cut(s) | 168 |
| BspACI | CCGC | 3 cut(s) | 208, 307, 818 |
| BspANI | GGCC | 2 cut(s) | 496, 1098 |
| BspCNI | CTCAG | 1 cut(s) | 589 |
| BspHI | TCATGA | 1 cut(s) | 51 |
| BspLI | GGNNCC | 4 cut(s) | 346, 369, 406, 1097 |
| BspMAI | CTGCAG | 1 cut(s) | 1074 |
| BspMI | ACCTGC | 1 cut(s) | 1063 |
| BspT104I | TTCGAA | 1 cut(s) | 458 |
| BspT107I | GGYRCC | 1 cut(s) | 344 |
| BsrDI | GCAATG | 1 cut(s) | 418 |
| BsrI | ACTGG | 1 cut(s) | 736 |
| BssECI | CCNNGG | 3 cut(s) | 363, 491, 497 |
| BssMI | GATC | 1 cut(s) | 168 |
| BssNAI | GTATAC | 1 cut(s) | 667 |
| BssNI | GRCGYC | 1 cut(s) | 345 |
| Bst1107I | GTATAC | 1 cut(s) | 667 |
| Bst2UI | CCWGG | 2 cut(s) | 320, 493 |
| Bst4CI | ACNGT | 4 cut(s) | 163, 440, 628, 883 |
| Bst6I | CTCTTC | 1 cut(s) | 492 |
| BstACI | GRCGYC | 1 cut(s) | 345 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1069 |
| BstBAI | YACGTR | 1 cut(s) | 1045 |
| BstBI | TTCGAA | 1 cut(s) | 458 |
| BstC8I | GCNNGC | 3 cut(s) | 360, 737, 794 |
| BstDEI | CTNAG | 2 cut(s) | 597, 980 |
| BstF5I | GGATG | 4 cut(s) | 135, 198, 1000, 1128 |
| BstH2I | RGCGCY | 2 cut(s) | 304, 348 |
| BstHHI | GCGC | 2 cut(s) | 303, 347 |
| BstKTI | GATC | 1 cut(s) | 171 |
| BstMAI | GTCTC | 2 cut(s) | 223, 881 |
| BstMBI | GATC | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 216, 286, 309, 657, 1069 |
| BstNI | CCWGG | 2 cut(s) | 320, 493 |
| BstNSI | RCATGY | 2 cut(s) | 1149, 1184 |
| BstSCI | CCNGG | 3 cut(s) | 318, 491, 836 |
| BstSFI | CTRYAG | 1 cut(s) | 1070 |
| BstSLI | GKGCMC | 1 cut(s) | 1044 |
| BstV1I | GCAGC | 5 cut(s) | 197, 290, 321, 669, 1056 |
| BstX2I | RGATCY | 1 cut(s) | 168 |
| BstYI | RGATCY | 1 cut(s) | 168 |
| BstZ17I | GTATAC | 1 cut(s) | 667 |
| BsuRI | GGCC | 2 cut(s) | 496, 1098 |
| BtrI | CACGTC | 1 cut(s) | 334 |
| BtsCI | GGATG | 4 cut(s) | 135, 198, 1000, 1128 |
| BtsIMutI | CAGTG | 4 cut(s) | 81, 445, 879, 916 |
| BveI | ACCTGC | 1 cut(s) | 1063 |
| Cac8I | GCNNGC | 3 cut(s) | 360, 737, 794 |
| CciI | TCATGA | 1 cut(s) | 51 |
| CfoI | GCGC | 2 cut(s) | 303, 347 |
| Cfr13I | GGNCC | 3 cut(s) | 367, 951, 1096 |
| CseI | GACGC | 1 cut(s) | 202 |
| CsiI | ACCWGGT | 1 cut(s) | 318 |
| Csp6I | GTAC | 1 cut(s) | 1010 |
| CviAII | CATG | 5 cut(s) | 52, 225, 1064, 1146, 1181 |
| CviQI | GTAC | 1 cut(s) | 1010 |
| DdeI | CTNAG | 2 cut(s) | 597, 980 |
| DinI | GGCGCC | 1 cut(s) | 346 |
| DpnI | GATC | 1 cut(s) | 170 |
| DpnII | GATC | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 492 |
| EarI | CTCTTC | 1 cut(s) | 492 |
| Eco24I | GRGCYC | 2 cut(s) | 330, 407 |
| Eco47I | GGWCC | 2 cut(s) | 367, 951 |
| Eco47III | AGCGCT | 1 cut(s) | 302 |
| Eco57I | CTGAAG | 2 cut(s) | 761, 767 |
| Eco88I | CYCGRG | 2 cut(s) | 851, 1014 |
| EcoO109I | RGGNCCY | 2 cut(s) | 367, 1096 |
| EcoRII | CCWGG | 2 cut(s) | 318, 491 |
| EcoT38I | GRGCYC | 2 cut(s) | 330, 407 |
| EgeI | GGCGCC | 1 cut(s) | 346 |
| EheI | GGCGCC | 1 cut(s) | 346 |
| FaeI | CATG | 5 cut(s) | 55, 228, 1067, 1149, 1184 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 963, 995 |
| FatI | CATG | 5 cut(s) | 51, 224, 1063, 1145, 1180 |
| FblI | GTMKAC | 1 cut(s) | 666 |
| Fnu4HI | GCNGC | 7 cut(s) | 208, 211, 304, 307, 310, 658, 1070 |
| FokI | GGATG | 4 cut(s) | 122, 185, 987, 1135 |
| FriOI | GRGCYC | 2 cut(s) | 330, 407 |
| Fsp4HI | GCNGC | 7 cut(s) | 208, 211, 304, 307, 310, 658, 1070 |
| GlaI | GCGC | 2 cut(s) | 302, 346 |
| GluI | GCNGC | 7 cut(s) | 208, 211, 304, 307, 310, 658, 1070 |
| HaeII | RGCGCY | 2 cut(s) | 304, 348 |
| HaeIII | GGCC | 2 cut(s) | 496, 1098 |
| HapII | CCGG | 1 cut(s) | 837 |
| HgaI | GACGC | 1 cut(s) | 202 |
| HhaI | GCGC | 2 cut(s) | 303, 347 |
| Hin1I | GRCGYC | 1 cut(s) | 345 |
| Hin1II | CATG | 5 cut(s) | 55, 228, 1067, 1149, 1184 |
| Hin6I | GCGC | 2 cut(s) | 301, 345 |
| HinP1I | GCGC | 2 cut(s) | 301, 345 |
| HincII | GTYRAC | 1 cut(s) | 1117 |
| HindII | GTYRAC | 1 cut(s) | 1117 |
| HindIII | AAGCTT | 2 cut(s) | 749, 1162 |
| HinfI | GANTC | 7 cut(s) | 86, 460, 466, 507, 580, 679, 944 |
| HpaII | CCGG | 1 cut(s) | 837 |
| HphI | GGTGA | 7 cut(s) | 81, 181, 373, 485, 614, 625, 931 |
| Hpy166II | GTNNAC | 2 cut(s) | 667, 1117 |
| Hpy188I | TCNGA | 5 cut(s) | 244, 338, 465, 585, 598 |
| Hpy188III | TCNNGA | 2 cut(s) | 52, 166 |
| Hpy8I | GTNNAC | 2 cut(s) | 667, 1117 |
| Hpy99I | CGWCG | 2 cut(s) | 37, 398 |
| HpyAV | CCTTC | 5 cut(s) | 48, 142, 294, 835, 919 |
| HpyCH4III | ACNGT | 4 cut(s) | 163, 440, 628, 883 |
| HpyCH4IV | ACGT | 3 cut(s) | 333, 396, 1044 |
| HpyCH4V | TGCA | 7 cut(s) | 23, 219, 411, 776, 941, 1072, 1153 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 216, 286, 309, 657, 1069 |
| HpyF3I | CTNAG | 2 cut(s) | 597, 980 |
| HpySE526I | ACGT | 3 cut(s) | 333, 396, 1044 |
| Hsp92I | GRCGYC | 1 cut(s) | 345 |
| Hsp92II | CATG | 5 cut(s) | 55, 228, 1067, 1149, 1184 |
| HspAI | GCGC | 2 cut(s) | 301, 345 |
| KasI | GGCGCC | 1 cut(s) | 344 |
| Kzo9I | GATC | 1 cut(s) | 168 |
| LmnI | GCTCC | 1 cut(s) | 410 |
| Lsp1109I | GCAGC | 5 cut(s) | 197, 290, 321, 669, 1056 |
| LweI | GCATC | 1 cut(s) | 1113 |
| MabI | ACCWGGT | 1 cut(s) | 318 |
| MaeII | ACGT | 3 cut(s) | 333, 396, 1044 |
| MaeIII | GTNAC | 3 cut(s) | 807, 893, 1027 |
| MalI | GATC | 1 cut(s) | 170 |
| MboI | GATC | 1 cut(s) | 168 |
| MboII | GAAGA | 4 cut(s) | 67, 163, 479, 598 |
| MfeI | CAATTG | 1 cut(s) | 511 |
| MflI | RGATCY | 1 cut(s) | 168 |
| MhlI | GDGCHC | 3 cut(s) | 330, 407, 1044 |
| MluCI | AATT | 2 cut(s) | 14, 511 |
| Mly113I | GGCGCC | 1 cut(s) | 345 |
| MlyI | GAGTC | 1 cut(s) | 953 |
| MmeI | TCCRAC | 3 cut(s) | 267, 656, 706 |
| MseI | TTAA | 5 cut(s) | 12, 482, 702, 969, 1059 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1005 |
| MspA1I | CMGCKG | 1 cut(s) | 210 |
| MspI | CCGG | 1 cut(s) | 837 |
| MspR9I | CCNGG | 3 cut(s) | 320, 493, 838 |
| MunI | CAATTG | 1 cut(s) | 511 |
| MvaI | CCWGG | 2 cut(s) | 320, 493 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 216, 286, 309, 657, 1069 |
| NarI | GGCGCC | 1 cut(s) | 345 |
| NciI | CCSGG | 1 cut(s) | 838 |
| NdeII | GATC | 1 cut(s) | 168 |
| NlaIII | CATG | 5 cut(s) | 55, 228, 1067, 1149, 1184 |
| NlaIV | GGNNCC | 4 cut(s) | 346, 369, 406, 1097 |
| NmeAIII | GCCGAG | 2 cut(s) | 388, 522 |
| NspI | RCATGY | 2 cut(s) | 1149, 1184 |
| NspV | TTCGAA | 1 cut(s) | 458 |
| PaeR7I | CTCGAG | 2 cut(s) | 851, 1014 |
| PagI | TCATGA | 1 cut(s) | 51 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 330 |
| PfeI | GAWTC | 6 cut(s) | 86, 460, 466, 507, 580, 679 |
| PkrI | GCNGC | 7 cut(s) | 209, 212, 305, 308, 311, 659, 1071 |
| PleI | GAGTC | 1 cut(s) | 952 |
| PluTI | GGCGCC | 1 cut(s) | 348 |
| PpsI | GAGTC | 1 cut(s) | 952 |
| Ppu21I | YACGTR | 1 cut(s) | 1045 |
| PpuMI | RGGWCCY | 1 cut(s) | 367 |
| Psp5II | RGGWCCY | 1 cut(s) | 367 |
| Psp6I | CCWGG | 2 cut(s) | 318, 491 |
| PspGI | CCWGG | 2 cut(s) | 318, 491 |
| PspN4I | GGNNCC | 4 cut(s) | 346, 369, 406, 1097 |
| PspPI | GGNCC | 3 cut(s) | 367, 951, 1096 |
| PspPPI | RGGWCCY | 1 cut(s) | 367 |
| PspXI | VCTCGAGB | 2 cut(s) | 851, 1014 |
| PstI | CTGCAG | 1 cut(s) | 1074 |
| PsuI | RGATCY | 1 cut(s) | 168 |
| RsaI | GTAC | 1 cut(s) | 1011 |
| RsaNI | GTAC | 1 cut(s) | 1010 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1005 |
| SaqAI | TTAA | 5 cut(s) | 12, 482, 702, 969, 1059 |
| SatI | GCNGC | 7 cut(s) | 208, 211, 304, 307, 310, 658, 1070 |
| Sau3AI | GATC | 1 cut(s) | 168 |
| Sau96I | GGNCC | 3 cut(s) | 367, 951, 1096 |
| SchI | GAGTC | 1 cut(s) | 953 |
| ScrFI | CCNGG | 3 cut(s) | 320, 493, 838 |
| SduI | GDGCHC | 3 cut(s) | 330, 407, 1044 |
| SexAI | ACCWGGT | 1 cut(s) | 318 |
| SfaNI | GCATC | 1 cut(s) | 1113 |
| SfcI | CTRYAG | 1 cut(s) | 1070 |
| SfoI | GGCGCC | 1 cut(s) | 346 |
| Sfr274I | CTCGAG | 2 cut(s) | 851, 1014 |
| SfuI | TTCGAA | 1 cut(s) | 458 |
| SinI | GGWCC | 2 cut(s) | 367, 951 |
| SlaI | CTCGAG | 2 cut(s) | 851, 1014 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1005 |
| SmlI | CTYRAG | 4 cut(s) | 752, 851, 1014, 1109 |
| SmoI | CTYRAG | 4 cut(s) | 752, 851, 1014, 1109 |
| Sse9I | AATT | 2 cut(s) | 14, 511 |
| SsiI | CCGC | 3 cut(s) | 208, 307, 818 |
| SspDI | GGCGCC | 1 cut(s) | 344 |
| StyD4I | CCNGG | 3 cut(s) | 318, 491, 836 |
| TaaI | ACNGT | 4 cut(s) | 163, 440, 628, 883 |
| TaiI | ACGT | 3 cut(s) | 336, 399, 1047 |
| TaqI | TCGA | 8 cut(s) | 165, 324, 393, 458, 578, 801, 852, 1015 |
| TasI | AATT | 2 cut(s) | 14, 511 |
| TauI | GCSGC | 2 cut(s) | 210, 309 |
| TfiI | GAWTC | 6 cut(s) | 86, 460, 466, 507, 580, 679 |
| Tru1I | TTAA | 5 cut(s) | 12, 482, 702, 969, 1059 |
| Tru9I | TTAA | 5 cut(s) | 12, 482, 702, 969, 1059 |
| TscAI | CASTG | 4 cut(s) | 88, 445, 886, 916 |
| TseI | GCWGC | 5 cut(s) | 210, 303, 309, 657, 1069 |
| TspDTI | ATGAA | 8 cut(s) | 17, 68, 124, 507, 704, 816, 938, 1067 |
| TspGWI | ACGGA | 1 cut(s) | 821 |
| TspRI | CASTG | 4 cut(s) | 88, 445, 886, 916 |
| VpaK11BI | GGWCC | 2 cut(s) | 367, 951 |
| XapI | RAATTY | 1 cut(s) | 14 |
| XceI | RCATGY | 2 cut(s) | 1149, 1184 |
| XhoI | CTCGAG | 2 cut(s) | 851, 1014 |
| XmiI | GTMKAC | 1 cut(s) | 666 |