Rh4CG186900

F-box protein At3g07870-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000430
Physical Location & Seq
Reverse (-)
40290335 .. 40314724
24390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG186900.1

Sequence Viewer

Length: 1806 bp
ATGAAGAAAACCAAAGTTTCCCACAGCCACCGACCATCCAACACTGACATCCCTCCAAACCAAGAAGACGAAGTAGAAGAAGAGCATCACATTCTCCGACTGCCAAACCGCATAGTGCTGGAGTTCTTCTGCAAAATCCCAACGAAATGGCTCGCCCAATGCAAGTGTGTATGCAAGTCTTGGCGCCGGTTGCTTTCCGACCCTCATTTCACCAAAAGCCTCCTTTCACGAACACCCACTTACCTTCTGCTCCGAGACACTTGTTATCTCAAGAGCCTCGTCATCTTCGACTTCGAAAAGGCATCCGACAGAAATATGTTCGAGTTCTGGGACAGGCCGAAAACCGAAGACGACTGCTTGACCAAGCTTTCTGGAGACCGCAATGCTCTCATTTCTGGCCAGGTCATCGGTTCATGCAATGGCTTCCTCTGCATATACAATGACTGGCCTAACCCTTGGCGTCTTTACATTTACAATCCCATTACTGGTGAGTCTCTGACTCTTCCAACGCCTGAAATGAAATGCTCCTTTTTGTGTGGCTTAGGGTATAGTCCTATCAGTGATGTGTACAAAGTAGTCATGTTTAAGTATCCGAGTGAAGGTCCTAATAATAAAAGGGAGGTGAAGGTCATGACCGTTGGCTCTGGGGTTTGGAGAACCATTGGGGATTTGGGGTTTAATGTTTTGGGGGATGCTGATACAAATGGGATGTATCTTAATGGATTTCTTCACTGGATTGGTGAGTCTTGCACAGATTCGGTTTCGATATTTGCCTTTGATGTCGAAAATGAGTGCTTCCAAGAGTTGCCACCGCATCCTAGTGCTTTAAAAATCAAAAATATTGAAATCTTCAATGGTTGGCTGTCCATATTTCTTCGCAGAAGAGGTGTCATCAGTGTTTGGGTCATGAAGGATTATGGTGTTGAGGGGTCTTGGACCAAAGAGCTTGAAATTGAAAAGGCAAGTGATTCTCGAATCTTGATGTCTACAAACAAGGGGCCAGTGTTGATGTTACGTGATTGGGAAATTCACACTTATGATCTTGGAACAAAGAGACATCATCAAGGGTTAGAACCAAAGGAATTGATGTGCTATACTGAGGCATCTAATGAGCTTCAGAAGAAACATTACGCTGTCAACTCAATATTCTACTATTCCAGTTGCTGTGGTGGATTGACAAGGGGATGGGCTCTGCAAGGCTGGCCTGAACGTGGTGTTGTGCTGCAGGCGAATCGAGGCTGCAAGAAATCTGGTTCGAGGTCGAGATCGGTGGATGGCGCTCGGTTTGTGAGGCTTCGTGGTCGGGAGGATGAGCGGGGCTGCTGCGCAGTCGCGGGGACACTGGGCGGTGAAGGGGAGAAGTATTCGGCGGGTCGAGGCTGGCTGAAATGGTGGATCTCCTCTGATATTCTCAAGGATGCCACCAAAGTCGTTGCCAAAATTATCGGCAAACCCGAGTCCTATGTGATGATTTTGCTCAATAGGATTGTGCAGATTTCATTTGCGGGCACCAAAGAGCAGGTTGCGTATGGGGAATTGATCTCCATTTGGGGCATTGGACCAAGTGTTAATGGGAAGCTGATTCTGGAGACCATGCCAAGGTCTATCACCTACTTCTATCTCAAGTATAGTTCATACATTGCCATGTTACAGTGTGTAGCACCATGCCAAGGAAGGAAGCTGGATCTTGTTCTGGTGGTTGATGTCGGAGATGCAGTTGTGGCTAGAGATGGTCGCGGTCCTGCATTTGGCCAAAGTTGCAGAGGAAGAGAGCTCCGGCAAACAAGAAATGAAATCCTACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

601

Amino Acids

68.15

Weight (kDa)

8.71

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 31 - 70 7.4e-07 F-box-like
FBA_3 PF08268 99 - 316 3.5e-24 F-box associated beta propeller domain
FBA_1 PF07734 135 - 324 1.6e-18 F-box associated beta propeller domain
MIF PF01187 466 - 525 2.6e-06 Macrophage migration inhibitory factor (MIF)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000430)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g34920 FvH4_3g37340 FvH4_4g12931 FvH4_4g13090 FvH4_4g13100 FvH4_6g33904 FvH4_6g39874
malus_domestica MD04G1018800.v1.1 MD04G1020000.v1.1 MD04G1020500.v1.1 MD04G1021100.v1.1
prunus_persica Prupe.1G167600_v2.0.a1 Prupe.1G167800_v2.0.a1 Prupe.1G167900_v2.0.a1 Prupe.1G168000_v2.0.a1 Prupe.1G168100_v2.0.a1 Prupe.1G169600_v2.0.a1 Prupe.1G169800_v2.0.a1 Prupe.1G169900_v2.0.a1 Prupe.1G170000_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G170100_v2.0.a1 Prupe.1G187600_v2.0.a1
pyrus_communis pycom04g01610 pycom04g01630 pycom04g01660
rosa_chinensis RchiOBHm_Chr3g0474061 RchiOBHm_Chr3g0474071 RchiOBHm_Chr3g0494781 RchiOBHm_Chr4g0412631 RchiOBHm_Chr4g0412831 RchiOBHm_Chr4g0412861
rosa_laevigata RLG00000008252 RLG00000008255 RLG00000008272 RLG00000023952 RLG00000026909 RLG00000026910
rosa_multiflora Rmu_co8499129.1_g000001 Rmu_sc0001755.1_g000010 Rmu_sc0001755.1_g000011 Rmu_sc0002068.1_g000006 Rmu_sc0002072.1_g000048 Rmu_sc0002878.1_g000004 Rmu_sc0003022.1_g000007 Rmu_sc0003961.1_g000002 Rmu_sc0010735.1_g000006 Rmu_sc0016141.1_g000002
rosa_roxburghii Rroxscaffold_3G00261940 Rroxscaffold_4G00285070 Rroxscaffold_5G00356800 Rroxscaffold_5G00357100 Rroxscaffold_5G00357120 Rroxscaffold_6G00407500
rosa_rugosa Rorug01G0370900 Rorug03G0138300 Rorug03G0138700 Rorug04G0117100 Rorug04G0117200 Rorug04G0117300 Rorug04G0117300 Rorug07G0011200
rosa_samantha Rh1AG379300 Rh1BG342700 Rh1BG342800 Rh1BG384500 Rh1BG384800 Rh1CG356400 Rh1CG398400 Rh1CG398800 Rh1DG374100 Rh1DG415800 Rh1DG416000 Rh3AG188500 Rh3BG217500 Rh3BG217700 Rh3CG213400 Rh3CG213600 Rh4AG174500 Rh4AG175800 Rh4AG175900 Rh4AG176000 Rh4BG176100 Rh4BG176400 Rh4CG185400 Rh4CG186900 Rh4CG187100 Rh4DG172900 Rh4DG173100 Rh7AG137700 Rh7BG138000 Rh7CG141600
rosa_wichuraiana Rw4G014620 Rw4G014750 Rw4G014760 Rw4G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1327
Acc36I ACCTGC 1 cut(s) 1510
AccB1I GGYRCC 2 cut(s) 183, 1508
AccBSI CCGCTC 1 cut(s) 1315
AccI GTMKAC 1 cut(s) 986
AccII CGCG 2 cut(s) 1334, 1737
AciI CCGC 9 cut(s) 109, 379, 812, 1315, 1334, 1347, 1370, 1505, 1737
AclWI GGATC 2 cut(s) 1403, 1692
AcoI YGGCCR 2 cut(s) 397, 1750
AcsI RAATTY 1 cut(s) 1026
AcuI CTGAAG 1 cut(s) 1100
AcyI GRCGYC 2 cut(s) 184, 460
AfaI GTAC 1 cut(s) 569
AfiI CCNNNNNNNGG 6 cut(s) 485, 599, 1211, 1599, 1670, 1748
AgsI TTSAA 4 cut(s) 845, 853, 950, 956
AjnI CCWGG 1 cut(s) 399
AluBI AGCT 6 cut(s) 367, 946, 1114, 1579, 1681, 1774
AluI AGCT 6 cut(s) 367, 946, 1114, 1579, 1681, 1774
Alw21I GWGCWC 1 cut(s) 1776
Alw26I GTCTC 5 cut(s) 249, 369, 498, 1048, 1583
AlwI GGATC 2 cut(s) 1403, 1692
AlwNI CAGNNNCTG 1 cut(s) 1164
Ama87I CYCGRG 1 cut(s) 1454
AoxI GGCC 6 cut(s) 335, 397, 446, 998, 1202, 1750
ApeKI GCWGC 4 cut(s) 1222, 1239, 1320, 1323
ApoI RAATTY 1 cut(s) 1026
AspLEI GCGC 3 cut(s) 186, 1280, 1328
AspS9I GGNCC 5 cut(s) 602, 936, 998, 1559, 1739
AsuHPI GGTGA 6 cut(s) 202, 500, 634, 752, 1361, 1600
AsuII TTCGAA 1 cut(s) 294
AvaI CYCGRG 1 cut(s) 1454
AvaII GGWCC 4 cut(s) 602, 936, 1559, 1739
BaeGI GKGCMC 1 cut(s) 1511
BalI TGGCCA 2 cut(s) 399, 1752
BanI GGYRCC 2 cut(s) 183, 1508
BanII GRGCYC 2 cut(s) 1192, 1776
BarI GAAGNNNNNNTAC 2 cut(s) 1112, 1144
BbsI GAAGAC 2 cut(s) 72, 354
Bbv12I GWGCWC 1 cut(s) 1776
BbvI GCAGC 4 cut(s) 1209, 1226, 1307, 1310
BccI CCATC 4 cut(s) 43, 1179, 1268, 1724
BcgI CGANNNNNNTGC 2 cut(s) 1214, 1248
BciT130I CCWGG 1 cut(s) 401
BciVI GTATCC 1 cut(s) 600
BcoDI GTCTC 5 cut(s) 249, 369, 498, 1048, 1583
BfaI CTAG 2 cut(s) 819, 1725
BfmI CTRYAG 1 cut(s) 1223
BfoI RGCGCY 2 cut(s) 187, 1281
BfuAI ACCTGC 1 cut(s) 1510
BfuI GTATCC 1 cut(s) 600
BisI GCNGC 4 cut(s) 1223, 1240, 1321, 1324
BlsI GCNGC 4 cut(s) 1224, 1241, 1322, 1325
Bme1390I CCNGG 1 cut(s) 401
Bme18I GGWCC 4 cut(s) 602, 936, 1559, 1739
BmeT110I CYCGRG 1 cut(s) 1454
BmgT120I GGNCC 5 cut(s) 602, 936, 998, 1559, 1739
BmiI GGNNCC 3 cut(s) 185, 999, 1510
BmrFI CCNGG 1 cut(s) 401
BmrI ACTGGG 1 cut(s) 1352
BmsI GCATC 7 cut(s) 94, 311, 682, 823, 1112, 1408, 1702
BmuI ACTGGG 1 cut(s) 1352
BpiI GAAGAC 2 cut(s) 72, 354
BpmI CTGGAG 3 cut(s) 140, 393, 1607
Bpu10I CCTNAGC 1 cut(s) 541
Bpu14I TTCGAA 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 254, 1397, 1607
BsaAI YACGTR 1 cut(s) 1016
BsaHI GRCGYC 2 cut(s) 184, 460
BsaI GGTCTC 2 cut(s) 369, 1583
BsaJI CCNNGG 3 cut(s) 455, 1598, 1669
BsaXI ACNNNNNCTCC 2 cut(s) 1701, 1731
Bsc4I CCNNNNNNNGG 6 cut(s) 485, 599, 1211, 1599, 1670, 1748
Bse118I RCCGGY 1 cut(s) 186
Bse1I ACTGG 6 cut(s) 449, 490, 737, 1001, 1158, 1347
Bse3DI GCAATG 3 cut(s) 388, 424, 1638
BseBI CCWGG 1 cut(s) 401
BseDI CCNNGG 3 cut(s) 455, 1598, 1669
BseLI CCNNNNNNNGG 6 cut(s) 485, 599, 1211, 1599, 1670, 1748
BseMI GCAATG 3 cut(s) 388, 424, 1638
BseMII CTCAG 1 cut(s) 1089
BseNI ACTGG 6 cut(s) 449, 490, 737, 1001, 1158, 1347
BseRI GAGGAG 1 cut(s) 1390
BseSI GKGCMC 1 cut(s) 1511
BseXI GCAGC 4 cut(s) 1209, 1226, 1307, 1310
BsgI GTGCAG 1 cut(s) 1511
Bsh1236I CGCG 2 cut(s) 1334, 1737
BshFI GGCC 6 cut(s) 337, 399, 448, 1000, 1204, 1752
BshNI GGYRCC 2 cut(s) 183, 1508
BsiHKAI GWGCWC 1 cut(s) 1776
BsiHKCI CYCGRG 1 cut(s) 1454
BsiSI CCGG 2 cut(s) 187, 1777
BslFI GGGAC 2 cut(s) 344, 1351
BslI CCNNNNNNNGG 6 cut(s) 485, 599, 1211, 1599, 1670, 1748
BsmAI GTCTC 5 cut(s) 249, 369, 498, 1048, 1583
BsmFI GGGAC 2 cut(s) 344, 1351
BsnI GGCC 6 cut(s) 337, 399, 448, 1000, 1204, 1752
Bso31I GGTCTC 2 cut(s) 369, 1583
BsoBI CYCGRG 1 cut(s) 1454
Bsp119I TTCGAA 1 cut(s) 294
Bsp1286I GDGCHC 3 cut(s) 1192, 1511, 1776
Bsp1407I TGTACA 1 cut(s) 567
Bsp143I GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
BspACI CCGC 9 cut(s) 109, 379, 812, 1315, 1334, 1347, 1370, 1505, 1737
BspANI GGCC 6 cut(s) 337, 399, 448, 1000, 1204, 1752
BspCNI CTCAG 1 cut(s) 1090
BspFNI CGCG 2 cut(s) 1334, 1737
BspHI TCATGA 2 cut(s) 630, 906
BspLI GGNNCC 3 cut(s) 185, 999, 1510
BspMAI CTGCAG 1 cut(s) 1227
BspMI ACCTGC 1 cut(s) 1510
BspPI GGATC 2 cut(s) 1403, 1692
BspQI GCTCTTC 1 cut(s) 75
BspT104I TTCGAA 1 cut(s) 294
BspT107I GGYRCC 2 cut(s) 183, 1508
BspTNI GGTCTC 2 cut(s) 369, 1583
BsrBI CCGCTC 1 cut(s) 1315
BsrDI GCAATG 3 cut(s) 388, 424, 1638
BsrFI RCCGGY 1 cut(s) 186
BsrGI TGTACA 1 cut(s) 567
BsrI ACTGG 6 cut(s) 449, 490, 737, 1001, 1158, 1347
BssAI RCCGGY 1 cut(s) 186
BssECI CCNNGG 3 cut(s) 455, 1598, 1669
BssMI GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
BssNI GRCGYC 2 cut(s) 184, 460
BssT1I CCWWGG 3 cut(s) 455, 1598, 1669
Bst2UI CCWGG 1 cut(s) 401
Bst4CI ACNGT 2 cut(s) 637, 1653
Bst6I CTCTTC 4 cut(s) 75, 507, 877, 1762
BstACI GRCGYC 2 cut(s) 184, 460
BstAUI TGTACA 1 cut(s) 567
BstBAI YACGTR 1 cut(s) 1016
BstBI TTCGAA 1 cut(s) 294
BstC8I GCNNGC 5 cut(s) 153, 1202, 1227, 1382, 1507
BstDEI CTNAG 2 cut(s) 541, 1098
BstFNI CGCG 2 cut(s) 1334, 1737
BstH2I RGCGCY 2 cut(s) 187, 1281
BstHHI GCGC 3 cut(s) 186, 1280, 1328
BstKTI GATC 5 cut(s) 1042, 1268, 1398, 1542, 1687
BstMAI GTCTC 5 cut(s) 249, 369, 498, 1048, 1583
BstMBI GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
BstMWI GCNNNNNNNGC 5 cut(s) 190, 429, 1201, 1721, 1758
BstNI CCWGG 1 cut(s) 401
BstSCI CCNGG 1 cut(s) 399
BstSFI CTRYAG 1 cut(s) 1223
BstSLI GKGCMC 1 cut(s) 1511
BstUI CGCG 2 cut(s) 1334, 1737
BstV1I GCAGC 4 cut(s) 1209, 1226, 1307, 1310
BstV2I GAAGAC 2 cut(s) 72, 354
BstX2I RGATCY 2 cut(s) 1395, 1684
BstXI CCANNNNNNTGG 1 cut(s) 147
BstYI RGATCY 2 cut(s) 1395, 1684
BsuI GTATCC 1 cut(s) 600
BsuRI GGCC 6 cut(s) 337, 399, 448, 1000, 1204, 1752
BtsIMutI CAGTG 7 cut(s) 42, 565, 730, 901, 1008, 1340, 1658
BveI ACCTGC 1 cut(s) 1510
Cac8I GCNNGC 5 cut(s) 153, 1202, 1227, 1382, 1507
CaiI CAGNNNCTG 1 cut(s) 1164
CciI TCATGA 2 cut(s) 630, 906
CfoI GCGC 3 cut(s) 186, 1280, 1328
Cfr10I RCCGGY 1 cut(s) 186
Cfr13I GGNCC 5 cut(s) 602, 936, 998, 1559, 1739
CseI GACGC 1 cut(s) 449
Csp6I GTAC 1 cut(s) 568
CviAII CATG 7 cut(s) 414, 580, 631, 907, 1594, 1645, 1665
CviQI GTAC 1 cut(s) 568
DdeI CTNAG 2 cut(s) 541, 1098
DinI GGCGCC 1 cut(s) 185
DpnI GATC 5 cut(s) 1041, 1267, 1397, 1541, 1686
DpnII GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
DraI TTTAAA 1 cut(s) 828
EaeI YGGCCR 2 cut(s) 397, 1750
Eam1104I CTCTTC 4 cut(s) 75, 507, 877, 1762
EarI CTCTTC 4 cut(s) 75, 507, 877, 1762
Ecl136II GAGCTC 1 cut(s) 1774
Eco130I CCWWGG 3 cut(s) 455, 1598, 1669
Eco24I GRGCYC 2 cut(s) 1192, 1776
Eco31I GGTCTC 2 cut(s) 369, 1583
Eco47I GGWCC 4 cut(s) 602, 936, 1559, 1739
Eco53kI GAGCTC 1 cut(s) 1774
Eco57I CTGAAG 1 cut(s) 1100
Eco88I CYCGRG 1 cut(s) 1454
EcoICRI GAGCTC 1 cut(s) 1774
EcoO109I RGGNCCY 1 cut(s) 602
EcoRII CCWGG 1 cut(s) 399
EcoT14I CCWWGG 3 cut(s) 455, 1598, 1669
EcoT38I GRGCYC 2 cut(s) 1192, 1776
EgeI GGCGCC 1 cut(s) 185
EheI GGCGCC 1 cut(s) 185
ErhI CCWWGG 3 cut(s) 455, 1598, 1669
FaeI CATG 7 cut(s) 417, 583, 634, 910, 1597, 1648, 1668
FaqI GGGAC 2 cut(s) 344, 1351
FatI CATG 7 cut(s) 413, 579, 630, 906, 1593, 1644, 1664
FauI CCCGC 4 cut(s) 1308, 1327, 1363, 1498
FblI GTMKAC 1 cut(s) 986
Fnu4HI GCNGC 4 cut(s) 1223, 1240, 1321, 1324
FriOI GRGCYC 2 cut(s) 1192, 1776
Fsp4HI GCNGC 4 cut(s) 1223, 1240, 1321, 1324
FspBI CTAG 2 cut(s) 819, 1725
FspI TGCGCA 1 cut(s) 1327
GlaI GCGC 3 cut(s) 185, 1279, 1327
GluI GCNGC 4 cut(s) 1223, 1240, 1321, 1324
GsuI CTGGAG 3 cut(s) 140, 393, 1607
HaeII RGCGCY 2 cut(s) 187, 1281
HaeIII GGCC 6 cut(s) 337, 399, 448, 1000, 1204, 1752
HapII CCGG 2 cut(s) 187, 1777
HgaI GACGC 1 cut(s) 449
HhaI GCGC 3 cut(s) 186, 1280, 1328
Hin1I GRCGYC 2 cut(s) 184, 460
Hin1II CATG 7 cut(s) 417, 583, 634, 910, 1597, 1648, 1668
Hin6I GCGC 3 cut(s) 184, 1278, 1326
HinP1I GCGC 3 cut(s) 184, 1278, 1326
HincII GTYRAC 1 cut(s) 1138
HindII GTYRAC 1 cut(s) 1138
HindIII AAGCTT 1 cut(s) 365
HinfI GANTC 9 cut(s) 491, 499, 743, 755, 968, 975, 1231, 1457, 1582
HpaII CCGG 2 cut(s) 187, 1777
HphI GGTGA 6 cut(s) 202, 500, 634, 752, 1361, 1600
Hpy166II GTNNAC 3 cut(s) 568, 987, 1138
Hpy188I TCNGA 9 cut(s) 98, 199, 254, 307, 498, 594, 1119, 1405, 1709
Hpy8I GTNNAC 3 cut(s) 568, 987, 1138
HpyAV CCTTC 6 cut(s) 254, 593, 619, 904, 1346, 1668
HpyCH4III ACNGT 2 cut(s) 637, 1653
HpyCH4IV ACGT 2 cut(s) 1015, 1210
HpyF10VI GCNNNNNNNGC 5 cut(s) 190, 429, 1201, 1721, 1758
HpyF3I CTNAG 2 cut(s) 541, 1098
HpySE526I ACGT 2 cut(s) 1015, 1210
Hsp92I GRCGYC 2 cut(s) 184, 460
Hsp92II CATG 7 cut(s) 417, 583, 634, 910, 1597, 1648, 1668
HspAI GCGC 3 cut(s) 184, 1278, 1326
KasI GGCGCC 1 cut(s) 183
Kzo9I GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 3 cut(s) 255, 530, 1779
Lsp1109I GCAGC 4 cut(s) 1209, 1226, 1307, 1310
LweI GCATC 7 cut(s) 94, 311, 682, 823, 1112, 1408, 1702
MaeI CTAG 2 cut(s) 819, 1725
MaeII ACGT 2 cut(s) 1015, 1210
MaeIII GTNAC 2 cut(s) 1011, 1647
MalI GATC 5 cut(s) 1041, 1267, 1397, 1541, 1686
MbiI CCGCTC 1 cut(s) 1315
MboI GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
MflI RGATCY 2 cut(s) 1395, 1684
MhlI GDGCHC 3 cut(s) 1192, 1511, 1776
MlsI TGGCCA 2 cut(s) 399, 1752
MluCI AATT 5 cut(s) 951, 1026, 1082, 1440, 1535
MluNI TGGCCA 2 cut(s) 399, 1752
Mly113I GGCGCC 1 cut(s) 184
MlyI GAGTC 4 cut(s) 493, 500, 752, 1466
MmeI TCCRAC 6 cut(s) 63, 121, 222, 330, 530, 1687
Mox20I TGGCCA 2 cut(s) 399, 1752
MscI TGGCCA 2 cut(s) 399, 1752
MseI TTAA 5 cut(s) 585, 678, 717, 827, 1569
MslI CAYNNNNRTG 3 cut(s) 819, 1035, 1643
Msp20I TGGCCA 2 cut(s) 399, 1752
MspI CCGG 2 cut(s) 187, 1777
MspR9I CCNGG 1 cut(s) 401
MvaI CCWGG 1 cut(s) 401
MvnI CGCG 2 cut(s) 1334, 1737
MwoI GCNNNNNNNGC 5 cut(s) 190, 429, 1201, 1721, 1758
NarI GGCGCC 1 cut(s) 184
NdeII GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
NlaIII CATG 7 cut(s) 417, 583, 634, 910, 1597, 1648, 1668
NlaIV GGNNCC 3 cut(s) 185, 999, 1510
NsbI TGCGCA 1 cut(s) 1327
NspV TTCGAA 1 cut(s) 294
PagI TCATGA 2 cut(s) 630, 906
PciSI GCTCTTC 1 cut(s) 75
PcsI WCGNNNNNNNCGW 2 cut(s) 285, 1452
PfeI GAWTC 5 cut(s) 755, 968, 975, 1231, 1582
PkrI GCNGC 4 cut(s) 1224, 1241, 1322, 1325
PleI GAGTC 4 cut(s) 493, 499, 751, 1465
PluTI GGCGCC 1 cut(s) 187
PpsI GAGTC 4 cut(s) 493, 499, 751, 1465
Ppu21I YACGTR 1 cut(s) 1016
PpuMI RGGWCCY 1 cut(s) 602
Psp124BI GAGCTC 1 cut(s) 1776
Psp5II RGGWCCY 1 cut(s) 602
Psp6I CCWGG 1 cut(s) 399
PspGI CCWGG 1 cut(s) 399
PspN4I GGNNCC 3 cut(s) 185, 999, 1510
PspPI GGNCC 5 cut(s) 602, 936, 998, 1559, 1739
PspPPI RGGWCCY 1 cut(s) 602
PstI CTGCAG 1 cut(s) 1227
PstNI CAGNNNCTG 1 cut(s) 1164
PsuI RGATCY 2 cut(s) 1395, 1684
RsaI GTAC 1 cut(s) 569
RsaNI GTAC 1 cut(s) 568
RseI CAYNNNNRTG 3 cut(s) 819, 1035, 1643
SacI GAGCTC 1 cut(s) 1776
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 5 cut(s) 585, 678, 717, 827, 1569
SatI GCNGC 4 cut(s) 1223, 1240, 1321, 1324
Sau3AI GATC 5 cut(s) 1039, 1265, 1395, 1539, 1684
Sau96I GGNCC 5 cut(s) 602, 936, 998, 1559, 1739
SchI GAGTC 4 cut(s) 493, 500, 752, 1466
ScrFI CCNGG 1 cut(s) 401
SduI GDGCHC 3 cut(s) 1192, 1511, 1776
SfaNI GCATC 7 cut(s) 94, 311, 682, 823, 1112, 1408, 1702
SfcI CTRYAG 1 cut(s) 1223
SfoI GGCGCC 1 cut(s) 185
SfuI TTCGAA 1 cut(s) 294
SinI GGWCC 4 cut(s) 602, 936, 1559, 1739
SmiMI CAYNNNNRTG 3 cut(s) 819, 1035, 1643
SmlI CTYRAG 3 cut(s) 269, 1412, 1622
SmoI CTYRAG 3 cut(s) 269, 1412, 1622
Sse9I AATT 5 cut(s) 951, 1026, 1082, 1440, 1535
SsiI CCGC 9 cut(s) 109, 379, 812, 1315, 1334, 1347, 1370, 1505, 1737
SspDI GGCGCC 1 cut(s) 183
SspI AATATT 2 cut(s) 841, 1146
SspMI CTAG 2 cut(s) 819, 1725
SstI GAGCTC 1 cut(s) 1776
StyD4I CCNGG 1 cut(s) 399
StyI CCWWGG 3 cut(s) 455, 1598, 1669
TaaI ACNGT 2 cut(s) 637, 1653
TaiI ACGT 2 cut(s) 1018, 1213
TasI AATT 5 cut(s) 951, 1026, 1082, 1440, 1535
TatI WGTACW 1 cut(s) 567
TfiI GAWTC 5 cut(s) 755, 968, 975, 1231, 1582
Tru1I TTAA 5 cut(s) 585, 678, 717, 827, 1569
Tru9I TTAA 5 cut(s) 585, 678, 717, 827, 1569
TscAI CASTG 7 cut(s) 49, 565, 737, 901, 1008, 1347, 1658
TseI GCWGC 4 cut(s) 1222, 1239, 1320, 1323
TspDTI ATGAA 7 cut(s) 17, 402, 533, 923, 1488, 1623, 1806
TspRI CASTG 7 cut(s) 49, 565, 737, 901, 1008, 1347, 1658
VpaK11BI GGWCC 4 cut(s) 602, 936, 1559, 1739
XapI RAATTY 1 cut(s) 1026
XcmI CCANNNNNNNNNTGG 1 cut(s) 667
XmiI GTMKAC 1 cut(s) 986
XspI CTAG 2 cut(s) 819, 1725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.