AT1G28440
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012987
Physical Location & Seq
Forward (+)
9996713 .. 10000455
3743 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G28440.1

Sequence Viewer

Length: 2991 bp
ATGTATCTTCTCTTTCTCTTCTTACTTTTCCCCACCGTCTTCTCTCTTAACCAAGACGGTTTCATTCTTCAACAAGTCAAGCTCTCGTTAGACGACCCAGACTCATATCTCTCTTCCTGGAACTCCAACGATGCTTCTCCTTGTCGGTGGTCCGGCGTTTCCTGCGCCGGTGATTTCTCCTCCGTCACTTCCGTAGACCTCTCCAGCGCTAATCTCGCCGGACCTTTTCCTTCAGTCATTTGTCGTCTCTCTAATCTGGCTCATCTCTCTTTGTACAATAACTCCATCAACTCTACTCTTCCTCTCAACATCGCTGCTTGTAAGAGTCTTCAAACTCTCGATCTCTCTCAGAATCTACTCACCGGTGAGCTTCCACAAACTCTTGCCGATATTCCGACTTTGGTTCACTTAGATTTGACCGGTAACAACTTTTCCGGTGACATTCCGGCGAGTTTCGGCAAATTCGAAAACCTAGAGGTTCTTTCTCTTGTTTACAATCTCTTAGACGGTACGATTCCTCCGTTTCTCGGCAACATCAGCACGTTGAAGATGCTGAATCTTTCGTATAACCCCTTTAGTCCGAGTCGGATCCCGCCGGAGTTCGGGAACTTGACGAATCTCGAGGTTATGTGGCTCACTGAGTGTCATTTAGTCGGACAGATCCCTGACTCGCTGGGTCAACTCAGTAAACTCGTTGATTTAGACCTTGCGCTCAACGACCTTGTAGGTCATATTCCTCCTTCGCTCGGTGGTTTGACTAACGTCGTTCAGATTGAGCTGTACAACAACTCGTTGACCGGAGAGATTCCACCGGAGCTCGGGAATTTGAAATCGTTGAGACTTCTCGACGCGTCGATGAATCAGTTAACCGGGAAAATACCGGACGAGCTTTGCCGTGTGCCGTTGGAGAGTTTGAATCTCTACGAGAACAATCTAGAAGGTGAGCTTCCGGCGAGTATAGCGTTATCTCCGAACTTGTACGAGATTAGAATATTCGGAAACCGGTTAACCGGTGGATTACCAAAAGACCTCGGTCTAAACTCGCCGTTGAGATGGTTGGATGTTTCGGAAAACGAATTTTCCGGCGACTTACCGGCGGATCTGTGTGCGAAAGGAGAGCTAGAGGAGTTGTTGATTATACACAATTCCTTCTCCGGCGTTATACCGGAGAGTCTCGCCGATTGCAGGAGCTTGACACGTATCCGGTTAGCTTATAACCGGTTTTCCGGTTCAGTTCCTACAGGTTTCTGGGGATTGCCTCATGTTAACTTGCTTGAGCTCGTCAACAACTCGTTCTCCGGTGAAATTTCGAAGTCCATTGGAGGTGCTTCAAATCTCTCGCTGTTGATTCTCTCCAACAATGAATTCACCGGATCTTTGCCGGAGGAAATTGGTTCTTTGGATAATCTTAATCAGTTGTCGGCAAGTGGGAACAAGTTCAGTGGCTCGTTGCCTGATAGCTTGATGAGTCTTGGAGAATTAGGTACTCTTGATCTTCATGGTAATCAGTTTTCAGGAGAGTTAACTTCTGGAATCAAATCTTGGAAGAAGCTCAACGAGTTAAACTTAGCCGATAACGAATTCACCGGTAAAATTCCAGATGAAATCGGGAGTTTGTCAGTATTGAACTATCTTGATCTTTCTGGTAACATGTTCTCTGGCAAGATCCCGGTTTCATTGCAGAGTTTGAAGCTAAACCAGCTGAATCTGTCTTATAACCGGTTATCGGGTGACTTACCGCCTTCTTTAGCGAAAGATATGTATAAGAATAGCTTCATTGGGAACCCGGGATTGTGTGGGGATATCAAGGGATTGTGTGGCTCTGAGAATGAAGCTAAGAAGAGAGGCTATGTATGGCTTCTTAGATCGATTTTCGTACTTGCTGCGATGGTGCTTCTTGCGGGTGTTGCTTGGTTCTACTTCAAGTACAGGACTTTCAAGAAAGCAAGAGCCATGGAGAGATCTAAGTGGACTCTAATGTCGTTCCACAAACTCGGGTTCAGTGAGCATGAGATTCTTGAAAGCTTGGATGAAGATAATGTGATTGGAGCTGGAGCTTCAGGTAAAGTTTACAAGGTTGTACTCACCAATGGGGAAACTGTTGCGGTTAAGCGTTTATGGACAGGTTCTGTTAAGGAAACTGGAGATTGTGATCCAGAGAAAGGTTACAAACCTGGAGTTCAAGATGAGGCTTTTGAAGCTGAAGTTGAGACATTGGGTAAGATTAGGCATAAGAACATTGTGAAGCTATGGTGTTGCTGTTCTACAAGAGACTGCAAGCTCTTGGTTTATGAGTACATGCCTAATGGTAGTTTGGGAGATTTGCTTCATAGCAGTAAAGGAGGAATGTTGGGATGGCAAACGAGGTTTAAGATTATCTTAGATGCGGCTGAGGGGCTTTCGTATCTTCACCATGATTCTGTTCCTCCGATTGTGCATAGAGATATTAAGTCAAACAATATTTTGATCGATGGAGATTATGGTGCAAGAGTTGCTGATTTTGGTGTGGCTAAAGCTGTCGACTTGACCGGAAAAGCTCCTAAATCGATGTCAGTGATCGCTGGTTCATGCGGTTATATCGCACCAGAATACGCATATACGCTTCGTGTGAACGAGAAAAGCGACATCTACAGTTTCGGGGTAGTGATCCTTGAGATAGTAACTAGGAAACGCCCGGTTGATCCAGAACTTGGGGAGAAGGATTTGGTGAAGTGGGTTTGCTCTACATTGGACCAAAAAGGCATAGAGCATGTGATAGACCCGAAACTCGACTCTTGTTTCAAAGAAGAGATAAGCAAAATCCTCAACGTTGGACTCCTCTGCACGAGTCCGTTGCCCATTAACCGACCTTCCATGAGGCGTGTGGTTAAGATGTTGCAAGAAATTGGTGGTGGAGACGAAGATAGCCTACACAAGATAAGAGATGACAAGGATGGCAAGTTAACACCTTATTACAACGAAGACACCTCAGACCAAGGAAGTATAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

996

Amino Acids

108.93

Weight (kDa)

5.06

Isoelectric Point (pI)

36.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 16 - 55 3.4e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 79 - 182 4.4e-09 Leucine-rich repeat region
LRR_8 PF13855 85 - 144 1.6e-06 Leucine rich repeat
LRR_8 PF13855 132 - 191 2.1e-06 Leucine rich repeat
LRR_14 PF23598 175 - 298 4.4e-10 Leucine-rich repeat region
LRR_8 PF13855 373 - 431 1e-06 Leucine rich repeat
LRR_14 PF23598 437 - 547 2e-07 Leucine-rich repeat region
LRR_8 PF13855 517 - 575 7.1e-07 Leucine rich repeat
Pkinase PF00069 679 - 956 8.1e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 679 - 958 1.6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G28440
fragaria_vesca FvH4_3g08530 FvH4_3g08530
malus_domestica MD05G1309900.v1.1 MD10G1288500.v1.1
prunus_persica Prupe.4G053100_v2.0.a1
pyrus_communis pycom05g28630
rosa_chinensis RchiOBHm_Chr5g0009311
rosa_laevigata RLG00000031647
rosa_multiflora Rmu_sc0006233.1_g000007
rosa_roxburghii Rroxscaffold_1G00066780 Rroxscaffold_1G00067480
rosa_rugosa Rorug04G0441700
rosa_samantha Rh5AG072200 Rh5BG068700 Rh5CG081100 Rh5DG068900
rosa_wichuraiana Rw5G006750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1215, 1716
AasI GACNNNNNNGTC 1 cut(s) 1978
AccB7I CCANNNNNTGG 1 cut(s) 2690
AccI GTMKAC 2 cut(s) 195, 2520
AccII CGCG 1 cut(s) 851
AciI CCGC 7 cut(s) 593, 1097, 1739, 1901, 2105, 2387, 2571
AclI AACGTT 1 cut(s) 2808
AclWI GGATC 9 cut(s) 583, 596, 655, 1107, 1381, 1660, 2147, 2641, 2675
AcsI RAATTY 7 cut(s) 461, 823, 1076, 1305, 1364, 1580, 1593
AcuI CTGAAG 3 cut(s) 216, 2043, 2223
AdeI CACNNNGTG 1 cut(s) 642
AfaI GTAC 9 cut(s) 275, 511, 782, 980, 1486, 1878, 1928, 2082, 2297
AfeI AGCGCT 1 cut(s) 208
AfiI CCNNNNNNNGG 8 cut(s) 527, 602, 746, 818, 1185, 1726, 2162, 2690
AflIII ACRYGT 3 cut(s) 849, 1196, 1650
AgeI ACCGGT 7 cut(s) 362, 419, 1002, 1010, 1218, 1586, 1719
AjnI CCWGG 2 cut(s) 116, 2173
AjuI GAANNNNNNNTTGG 4 cut(s) 1349, 1381, 1525, 1557
Alw21I GWGCWC 2 cut(s) 819, 1281
Alw26I GTCTC 6 cut(s) 251, 832, 1178, 2204, 2265, 2889
AlwI GGATC 9 cut(s) 583, 596, 655, 1107, 1381, 1660, 2147, 2641, 2675
AlwNI CAGNNNCTG 1 cut(s) 2129
Ama87I CYCGRG 4 cut(s) 620, 818, 1786, 1994
Aor51HI AGCGCT 1 cut(s) 208
ApeKI GCWGC 2 cut(s) 314, 1883
ApoI RAATTY 7 cut(s) 461, 823, 1076, 1305, 1364, 1580, 1593
AsiGI ACCGGT 7 cut(s) 362, 419, 1002, 1010, 1218, 1586, 1719
Asp700I GAANNNNTTC 2 cut(s) 1436, 1772
AspLEI GCGC 3 cut(s) 167, 209, 712
AspS9I GGNCC 3 cut(s) 150, 221, 2731
AsuC2I CCSGG 5 cut(s) 871, 1670, 1787, 1788, 2675
AsuII TTCGAA 2 cut(s) 465, 1310
AvaI CYCGRG 4 cut(s) 620, 818, 1786, 1994
AvaII GGWCC 3 cut(s) 150, 221, 2731
BamHI GGATCC 1 cut(s) 588
BanII GRGCYC 2 cut(s) 819, 1281
BarI GAAGNNNNNNTAC 2 cut(s) 2892, 2924
BauI CACGAG 1 cut(s) 2824
BbsI GAAGAC 3 cut(s) 31, 320, 2967
Bbv12I GWGCWC 2 cut(s) 819, 1281
BbvCI CCTCAGC 1 cut(s) 2391
BbvI GCAGC 2 cut(s) 301, 1870
BccI CCATC 6 cut(s) 293, 1047, 1882, 2349, 2465, 2927
BceAI ACGGC 3 cut(s) 879, 886, 1030
BcgI CGANNNNNNTGC 2 cut(s) 2815, 2849
BciT130I CCWGG 2 cut(s) 118, 2175
BciVI GTATCC 1 cut(s) 1211
BcnI CCSGG 5 cut(s) 871, 1670, 1787, 1788, 2675
BcoDI GTCTC 6 cut(s) 251, 832, 1178, 2204, 2265, 2889
BfaI CTAG 4 cut(s) 473, 935, 1121, 2664
BfmI CTRYAG 2 cut(s) 1239, 2629
BfoI RGCGCY 1 cut(s) 210
BfuI GTATCC 1 cut(s) 1211
BglII AGATCT 1 cut(s) 1961
BisI GCNGC 3 cut(s) 315, 1884, 2388
BlsI GCNGC 3 cut(s) 316, 1885, 2389
Bme1390I CCNGG 7 cut(s) 118, 871, 1670, 1787, 1788, 2175, 2675
Bme18I GGWCC 3 cut(s) 150, 221, 2731
BmeT110I CYCGRG 4 cut(s) 620, 818, 1786, 1994
BmgT120I GGNCC 3 cut(s) 150, 221, 2731
BmiI GGNNCC 2 cut(s) 590, 1784
BmrFI CCNGG 7 cut(s) 118, 871, 1670, 1787, 1788, 2175, 2675
BmsI GCATC 3 cut(s) 121, 540, 2374
BoxI GACNNNNGTC 2 cut(s) 761, 1032
BpiI GAAGAC 3 cut(s) 31, 320, 2967
BpmI CTGGAG 4 cut(s) 187, 2073, 2163, 2196
Bpu10I CCTNAGC 1 cut(s) 2391
Bpu14I TTCGAA 2 cut(s) 465, 1310
BpuEI CTTGAG 2 cut(s) 1295, 2672
BpuMI CCSGG 5 cut(s) 871, 1670, 1787, 1788, 2675
Bsa29I ATCGAT 3 cut(s) 1868, 2469, 2546
BsaAI YACGTR 1 cut(s) 1199
BsaBI GATNNNNATC 1 cut(s) 2151
BsaJI CCNNGG 4 cut(s) 1030, 1786, 1953, 2974
BsaXI ACNNNNNCTCC 6 cut(s) 266, 296, 502, 532, 1280, 1310
Bsc4I CCNNNNNNNGG 8 cut(s) 527, 602, 746, 818, 1185, 1726, 2162, 2690
Bse118I RCCGGY 9 cut(s) 167, 362, 419, 1002, 1010, 1093, 1218, 1586, 1719
Bse1I ACTGG 1 cut(s) 2146
Bse3DI GCAATG 1 cut(s) 1676
Bse8I GATNNNNATC 1 cut(s) 2151
BseBI CCWGG 2 cut(s) 118, 2175
BseCI ATCGAT 3 cut(s) 1868, 2469, 2546
BseDI CCNNGG 4 cut(s) 1030, 1786, 1953, 2974
BseGI GGATG 4 cut(s) 1066, 2035, 2360, 2938
BseJI GATNNNNATC 1 cut(s) 2151
BseLI CCNNNNNNNGG 8 cut(s) 527, 602, 746, 818, 1185, 1726, 2162, 2690
BseMI GCAATG 1 cut(s) 1676
BseMII CTCAG 6 cut(s) 362, 630, 697, 1815, 2382, 2982
BseNI ACTGG 1 cut(s) 2146
BseRI GAGGAG 3 cut(s) 169, 1139, 2807
BseXI GCAGC 2 cut(s) 301, 1870
BseYI CCCAGC 1 cut(s) 673
BsgI GTGCAG 1 cut(s) 2806
Bsh1236I CGCG 1 cut(s) 851
BshTI ACCGGT 7 cut(s) 362, 419, 1002, 1010, 1218, 1586, 1719
BshVI ATCGAT 3 cut(s) 1868, 2469, 2546
BsiHKAI GWGCWC 2 cut(s) 819, 1281
BsiHKCI CYCGRG 4 cut(s) 620, 818, 1786, 1994
BslI CCNNNNNNNGG 8 cut(s) 527, 602, 746, 818, 1185, 1726, 2162, 2690
BsmAI GTCTC 6 cut(s) 251, 832, 1178, 2204, 2265, 2889
BsmBI CGTCTC 2 cut(s) 251, 2889
BsoBI CYCGRG 4 cut(s) 620, 818, 1786, 1994
Bsp119I TTCGAA 2 cut(s) 465, 1310
Bsp1286I GDGCHC 2 cut(s) 819, 1281
Bsp1407I TGTACA 2 cut(s) 273, 780
Bsp19I CCATGG 1 cut(s) 1953
BspACI CCGC 7 cut(s) 593, 1097, 1739, 1901, 2105, 2387, 2571
BspCNI CTCAG 6 cut(s) 361, 631, 696, 1816, 2383, 2981
BspDI ATCGAT 3 cut(s) 1868, 2469, 2546
BspFNI CGCG 1 cut(s) 851
BspLI GGNNCC 2 cut(s) 590, 1784
BspPI GGATC 9 cut(s) 583, 596, 655, 1107, 1381, 1660, 2147, 2641, 2675
BspT104I TTCGAA 2 cut(s) 465, 1310
BsrDI GCAATG 1 cut(s) 1676
BsrFI RCCGGY 9 cut(s) 167, 362, 419, 1002, 1010, 1093, 1218, 1586, 1719
BsrGI TGTACA 2 cut(s) 273, 780
BsrI ACTGG 1 cut(s) 2146
BssAI RCCGGY 9 cut(s) 167, 362, 419, 1002, 1010, 1093, 1218, 1586, 1719
BssECI CCNNGG 4 cut(s) 1030, 1786, 1953, 2974
BssSI CACGAG 1 cut(s) 2824
BssT1I CCWWGG 2 cut(s) 1953, 2974
Bst2BI CACGAG 1 cut(s) 2824
Bst2UI CCWGG 2 cut(s) 118, 2175
Bst4CI ACNGT 5 cut(s) 37, 59, 509, 2101, 2633
Bst6I CTCTTC 5 cut(s) 23, 118, 303, 1835, 2781
BstAPI GCANNNNNTGC 1 cut(s) 2492
BstAUI TGTACA 2 cut(s) 273, 780
BstBAI YACGTR 1 cut(s) 1199
BstBI TTCGAA 2 cut(s) 465, 1310
BstC8I GCNNGC 1 cut(s) 2279
BstDSI CCRYGG 1 cut(s) 1953
BstF5I GGATG 4 cut(s) 1066, 2035, 2360, 2938
BstFNI CGCG 1 cut(s) 851
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 3 cut(s) 167, 209, 712
BstMAI GTCTC 6 cut(s) 251, 832, 1178, 2204, 2265, 2889
BstMWI GCNNNNNNNGC 8 cut(s) 162, 215, 537, 959, 1699, 1907, 2198, 2492
BstNI CCWGG 2 cut(s) 118, 2175
BstNSI RCATGY 3 cut(s) 1654, 2302, 2753
BstPAI GACNNNNGTC 2 cut(s) 761, 1032
BstSCI CCNGG 7 cut(s) 116, 869, 1668, 1785, 1786, 2173, 2673
BstSFI CTRYAG 2 cut(s) 1239, 2629
BstUI CGCG 1 cut(s) 851
BstV1I GCAGC 2 cut(s) 301, 1870
BstV2I GAAGAC 3 cut(s) 31, 320, 2967
BstX2I RGATCY 6 cut(s) 588, 660, 1099, 1373, 1665, 1961
BstYI RGATCY 6 cut(s) 588, 660, 1099, 1373, 1665, 1961
Bsu15I ATCGAT 3 cut(s) 1868, 2469, 2546
BsuI GTATCC 1 cut(s) 1211
BsuTUI ATCGAT 3 cut(s) 1868, 2469, 2546
BtgI CCRYGG 1 cut(s) 1953
BtgZI GCGATG 2 cut(s) 295, 1901
BtsCI GGATG 4 cut(s) 1066, 2035, 2360, 2938
BtsIMutI CAGTG 4 cut(s) 636, 1447, 2008, 2559
Cac8I GCNNGC 1 cut(s) 2279
CaiI CAGNNNCTG 1 cut(s) 2129
CfoI GCGC 3 cut(s) 167, 209, 712
Cfr10I RCCGGY 9 cut(s) 167, 362, 419, 1002, 1010, 1093, 1218, 1586, 1719
Cfr13I GGNCC 3 cut(s) 150, 221, 2731
Cfr9I CCCGGG 1 cut(s) 1786
ClaI ATCGAT 3 cut(s) 1868, 2469, 2546
CseI GACGC 2 cut(s) 840, 857
Csp6I GTAC 9 cut(s) 274, 510, 781, 979, 1485, 1877, 1927, 2081, 2296
CspAI ACCGGT 7 cut(s) 362, 419, 1002, 1010, 1218, 1586, 1719
CspCI CAANNNNNGTGG 2 cut(s) 1423, 1458
CviQI GTAC 9 cut(s) 274, 510, 781, 979, 1485, 1877, 1927, 2081, 2296
DraIII CACNNNGTG 1 cut(s) 642
DrdI GACNNNNNNGTC 1 cut(s) 1978
DseDI GACNNNNNNGTC 1 cut(s) 1978
Eam1104I CTCTTC 5 cut(s) 23, 118, 303, 1835, 2781
EarI CTCTTC 5 cut(s) 23, 118, 303, 1835, 2781
EciI GGCGGA 1 cut(s) 1112
Ecl136II GAGCTC 2 cut(s) 817, 1279
Eco130I CCWWGG 2 cut(s) 1953, 2974
Eco24I GRGCYC 2 cut(s) 819, 1281
Eco32I GATATC 1 cut(s) 1804
Eco47I GGWCC 3 cut(s) 150, 221, 2731
Eco47III AGCGCT 1 cut(s) 208
Eco53kI GAGCTC 2 cut(s) 817, 1279
Eco57I CTGAAG 3 cut(s) 216, 2043, 2223
Eco88I CYCGRG 4 cut(s) 620, 818, 1786, 1994
EcoICRI GAGCTC 2 cut(s) 817, 1279
EcoRI GAATTC 2 cut(s) 1364, 1580
EcoRII CCWGG 2 cut(s) 116, 2173
EcoRV GATATC 1 cut(s) 1804
EcoT14I CCWWGG 2 cut(s) 1953, 2974
EcoT38I GRGCYC 2 cut(s) 819, 1281
ErhI CCWWGG 2 cut(s) 1953, 2974
Esp3I CGTCTC 2 cut(s) 251, 2889
FalI AAGNNNNNCTT 7 cut(s) 930, 962, 1757, 1789, 2363, 2395, 2971
FauI CCCGC 2 cut(s) 600, 1894
FblI GTMKAC 2 cut(s) 195, 2520
Fnu4HI GCNGC 3 cut(s) 315, 1884, 2388
FokI GGATG 4 cut(s) 1073, 2042, 2367, 2945
FriOI GRGCYC 2 cut(s) 819, 1281
Fsp4HI GCNGC 3 cut(s) 315, 1884, 2388
FspBI CTAG 4 cut(s) 473, 935, 1121, 2664
GlaI GCGC 3 cut(s) 166, 208, 711
GluI GCNGC 3 cut(s) 315, 1884, 2388
GsaI CCCAGC 1 cut(s) 677
GsuI CTGGAG 4 cut(s) 187, 2073, 2163, 2196
HaeII RGCGCY 1 cut(s) 210
HgaI GACGC 2 cut(s) 840, 857
HhaI GCGC 3 cut(s) 167, 209, 712
Hin6I GCGC 3 cut(s) 165, 207, 710
HinP1I GCGC 3 cut(s) 165, 207, 710
HincII GTYRAC 9 cut(s) 680, 795, 867, 1008, 1267, 1285, 1524, 2521, 2943
HindII GTYRAC 9 cut(s) 680, 795, 867, 1008, 1267, 1285, 1524, 2521, 2943
HindIII AAGCTT 1 cut(s) 2023
HpaI GTTAAC 5 cut(s) 867, 1008, 1267, 1524, 2943
Hpy99I CGWCG 3 cut(s) 767, 851, 856
HpyAV CCTTC 7 cut(s) 240, 750, 932, 1159, 1752, 2692, 2859
HpyCH4III ACNGT 5 cut(s) 37, 59, 509, 2101, 2633
HpyCH4IV ACGT 4 cut(s) 542, 762, 1198, 2808
HpyCH4V TGCA 7 cut(s) 1185, 1681, 2277, 2437, 2486, 2823, 2878
HpyF10VI GCNNNNNNNGC 8 cut(s) 162, 215, 537, 959, 1699, 1907, 2198, 2492
HpySE526I ACGT 4 cut(s) 542, 762, 1198, 2808
HspAI GCGC 3 cut(s) 165, 207, 710
KspAI GTTAAC 5 cut(s) 867, 1008, 1267, 1524, 2943
LmnI GCTCC 5 cut(s) 814, 1188, 2048, 2054, 2542
Lsp1109I GCAGC 2 cut(s) 301, 1870
LweI GCATC 3 cut(s) 121, 540, 2374
MaeI CTAG 4 cut(s) 473, 935, 1121, 2664
MaeII ACGT 4 cut(s) 542, 762, 1198, 2808
MaeIII GTNAC 7 cut(s) 184, 422, 437, 1646, 1730, 2165, 2659
MflI RGATCY 6 cut(s) 588, 660, 1099, 1373, 1665, 1961
MhlI GDGCHC 2 cut(s) 819, 1281
MluI ACGCGT 1 cut(s) 849
MmeI TCCRAC 8 cut(s) 150, 419, 566, 634, 885, 1038, 1380, 2791
MroXI GAANNNNTTC 2 cut(s) 1436, 1772
MspA1I CMGCKG 1 cut(s) 1702
MspR9I CCNGG 7 cut(s) 118, 871, 1670, 1787, 1788, 2175, 2675
MvaI CCWGG 2 cut(s) 118, 2175
MvnI CGCG 1 cut(s) 851
MwoI GCNNNNNNNGC 8 cut(s) 162, 215, 537, 959, 1699, 1907, 2198, 2492
NciI CCSGG 5 cut(s) 871, 1670, 1787, 1788, 2675
NcoI CCATGG 1 cut(s) 1953
NlaIV GGNNCC 2 cut(s) 590, 1784
NmeAIII GCCGAG 1 cut(s) 507
NmuCI GTSAC 3 cut(s) 184, 437, 1730
NspI RCATGY 3 cut(s) 1654, 2302, 2753
NspV TTCGAA 2 cut(s) 465, 1310
PaeR7I CTCGAG 1 cut(s) 620
PciI ACATGT 1 cut(s) 1650
PcsI WCGNNNNNNNCGW 3 cut(s) 462, 518, 2619
PdmI GAANNNNTTC 2 cut(s) 1436, 1772
PflMI CCANNNNNTGG 1 cut(s) 2690
PfoI TCCNGGA 1 cut(s) 116
PinAI ACCGGT 7 cut(s) 362, 419, 1002, 1010, 1218, 1586, 1719
PkrI GCNGC 3 cut(s) 316, 1885, 2389
Ppu21I YACGTR 1 cut(s) 1199
PscI ACATGT 1 cut(s) 1650
PshAI GACNNNNGTC 2 cut(s) 761, 1032
PsiI TTATAA 2 cut(s) 1215, 1716
Psp124BI GAGCTC 2 cut(s) 819, 1281
Psp1406I AACGTT 1 cut(s) 2808
Psp6I CCWGG 2 cut(s) 116, 2173
PspFI CCCAGC 1 cut(s) 673
PspGI CCWGG 2 cut(s) 116, 2173
PspN4I GGNNCC 2 cut(s) 590, 1784
PspPI GGNCC 3 cut(s) 150, 221, 2731
PstNI CAGNNNCTG 1 cut(s) 2129
PsuI RGATCY 6 cut(s) 588, 660, 1099, 1373, 1665, 1961
PvuII CAGCTG 1 cut(s) 1702
RsaI GTAC 9 cut(s) 275, 511, 782, 980, 1486, 1878, 1928, 2082, 2297
RsaNI GTAC 9 cut(s) 274, 510, 781, 979, 1485, 1877, 1927, 2081, 2296
SacI GAGCTC 2 cut(s) 819, 1281
SalI GTCGAC 1 cut(s) 2519
SatI GCNGC 3 cut(s) 315, 1884, 2388
Sau96I GGNCC 3 cut(s) 150, 221, 2731
ScrFI CCNGG 7 cut(s) 118, 871, 1670, 1787, 1788, 2175, 2675
SduI GDGCHC 2 cut(s) 819, 1281
SfaNI GCATC 3 cut(s) 121, 540, 2374
SfcI CTRYAG 2 cut(s) 1239, 2629
Sfr274I CTCGAG 1 cut(s) 620
SfuI TTCGAA 2 cut(s) 465, 1310
SgrAI CRCCGGYG 2 cut(s) 167, 362
SinI GGWCC 3 cut(s) 150, 221, 2731
SlaI CTCGAG 1 cut(s) 620
SmaI CCCGGG 1 cut(s) 1788
SmlI CTYRAG 3 cut(s) 620, 1274, 2651
SmoI CTYRAG 3 cut(s) 620, 1274, 2651
SsiI CCGC 7 cut(s) 593, 1097, 1739, 1901, 2105, 2387, 2571
SspI AATATT 2 cut(s) 993, 2461
SspMI CTAG 4 cut(s) 473, 935, 1121, 2664
SstI GAGCTC 2 cut(s) 819, 1281
StyD4I CCNGG 7 cut(s) 116, 869, 1668, 1785, 1786, 2173, 2673
StyI CCWWGG 2 cut(s) 1953, 2974
TaaI ACNGT 5 cut(s) 37, 59, 509, 2101, 2633
TaiI ACGT 4 cut(s) 545, 765, 1201, 2811
TaqII GACCGA 1 cut(s) 1022
TatI WGTACW 5 cut(s) 273, 780, 1926, 2080, 2295
TauI GCSGC 1 cut(s) 2390
TscAI CASTG 4 cut(s) 643, 1447, 2008, 2559
TseFI GTSAC 3 cut(s) 184, 437, 1730
TseI GCWGC 2 cut(s) 314, 1883
Tsp45I GTSAC 3 cut(s) 184, 437, 1730
TspGWI ACGGA 4 cut(s) 172, 181, 510, 2820
TspMI CCCGGG 1 cut(s) 1786
TspRI CASTG 4 cut(s) 643, 1447, 2008, 2559
Van91I CCANNNNNTGG 1 cut(s) 2690
VpaK11BI GGWCC 3 cut(s) 150, 221, 2731
XapI RAATTY 7 cut(s) 461, 823, 1076, 1305, 1364, 1580, 1593
XbaI TCTAGA 1 cut(s) 934
XceI RCATGY 3 cut(s) 1654, 2302, 2753
XcmI CCANNNNNNNNNTGG 1 cut(s) 2860
XhoI CTCGAG 1 cut(s) 620
XmaI CCCGGG 1 cut(s) 1786
XmiI GTMKAC 2 cut(s) 195, 2520
XmnI GAANNNNTTC 2 cut(s) 1436, 1772
XspI CTAG 4 cut(s) 473, 935, 1121, 2664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.