FvH4_3g08530
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0012987
Physical Location & Seq
Reverse (-)
4978450 .. 4982413
3964 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g08530.t1

Sequence Viewer

Length: 2265 bp
ATGAATATGCTTCTCTCCTACCTCCTCCTCCTCTCTTCCTCCCTCCTCCTCCACCCCACCTCCTCCCTCACCCAAGAAGGCCTCTACCTCCAACACATCAAACACTCCCTCGACGACCCCGACTCCTCCCTCTCCTCCTGGAACGACCAAGACGCCACCCCTTGCTCCTGGGCCGGCATCACCTGCGACGTCACCTCCACCGTCACCTCCGTCGACCTCTCCTCCTTCAACCTCTTCGGCCCTTTCCCCTACCTCCTCTGCCGCCTCCCCTCCCTCTCCTTCATCTCCCTCTACAACAACTCCATCAACTCCACCCTCCCTTCTGATCTCTCCACGTGTCGCAACCTCGTCCACCTCGACTTGGCTCAGAACCTCCTCACGGGCTCCCTCCCCTCCACCCTCCCCGACCTCCCCTCCCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCGGGAGAAATTCCGGAATCTTTCGGGAGATTCCAAAAACTCGAGGTCCTATCTCTCGTCTACAATCTCCTCGACAGCGCCATCCCTCCTTTTCTCGGCAATATCTCCTCCCTCAAAATGCTCAACCTTTCTTACAACCCGTTTTTCCCGGGTCGGATCCCGCCCGAGCTCGGTAACCTAACTAACCTCCGAGTTCTCTGGCTCACCGAGTGCAACTTAATCGGTGAGATACCCGACTCGCTGGGTCGACTCAGTAACCTCACCGATTTGGACCTTGCTATTAACGCCCTGCACGGTCCGATTCCGGCGTCGTTGACTGATTTGACCAGCGTCGTTCAGATAGAGCTCTATAACAACTCCTTGACCGGAGGCTTGCCGCCGGGAATGTCGAAGCTGAAGAACCTCCGGCTGCTCGACGCGTCCATGAACCGGCTGACGGGGCCGATTCCCGACGAGCTGACCCGGCTGGAGCTGGAAAGCCTCAATCTTTACGAGAACAGTTTCGAGGGGAGTTTGCCGGCGAGCATTGCCGACTCGCCGAACCTGTACGAGCTCAGGCTGTTCCAGAACAAGCTCACCGGCGAGCTGCCGCAGAATCTCGGCAAGAACTCGCCGCTGAGGTGGGTAGACGTTTCGAACAACCAGTTTTCCGGGAAGATTCCGGCGACGCTGTGCGAGAAGGGGCAAGTGGAGGAGATGCTGATGATCAACAATGCTTTTTCCGGCGAGATTCCGGCGAGCTTGGGGGAGTGTCGGAGCTTGACGCGTGTCCGGTTGGGTCACAACCGGTTAAGTGGTGAAGTTCCGGCGAGTTTCTGGGGGCTACCGCATGTCTATCTACTCGAGCTCGTTGATAATCAGCTGTCCGGCCAGATAGGCAACACTATCGCCGGTGCGTCTAACCTTTCGCTACTGATAATAGAAAAGAACAAGTTTGAAGGTCCGATACCGGAGGAGATTGGGTTGGTTGAAAATCTTCTGCAGTTTTCAGGAGGTGAGAATAAGCTCAGTGGGGCTTTGCCTGAGAGTATAGTGAAACTACGACAGCTAAGCACGCTGGACCTTCACAGCAATGAGCTTTCCGGTGAGCTTCCGAGTGGCACTCGGTCTTGGTTGCATCTTAGTGAGCTCAATTTGGCGAATAACCAACTTTCCGGGAAAATCCCCGATGGAATTGGGAACTTGACTGTGCTGAATTACCTTGATCTTTCGAAGAATAGGTTTTCAGGTCAAGTTCCGGTCGGGTTGCAGAATTTGAAGCTGAATGTGTTCAATTTGTCAAACAACGAGCTTTCCGGGGAGCTCCCTCCTTTGTTTGCAAAGGAGATGTACAGAAATAGCTTTCTGGGGAATCCTGGTCTTTGTGGAGATTTGGAGGGGTTATGTGAGAGCAGAGCTGAGCAGAAAAGCGAGGGATACATATGGTTGCTGAGGTGCATTTTCATTCTTGCTGCCTTGGTCTTTGTGGTGGGTGTGGTTTGGTTTTACTTTAAGTACAAGAATTTCAAGAAGGCCAATGGTGCTACAGATAAATCGAAGTGGACTTTGATATCGTTTCACAAGCTGGGTTTCAGCGAGTATGAGATATTGGATTGCCTTGATGAAGATAATGTGATTGGGACTGGGGGGTCTGGGAAAGTGTACAAGGTTGTGCTGAGCAATGGGGACGTTGTTGCAGTGAAGAAGCTGTGGAGAGGGAAAGTGAAAGAGTGCGATGCCAATGATGTTGAGAAGGGTTGGGTCCAAGATGATGGCTTTGAGGCAGAGGTTGACACTTTGGGGAAGATTAGGCACAGAGAAGCATCCCCAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

755

Amino Acids

82.86

Weight (kDa)

4.97

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 24 - 63 3.4e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 193 7.5e-06 Leucine-rich repeat region
LRR_8 PF13855 90 - 150 4.4e-07 Leucine rich repeat
LRR_4 PF12799 115 - 154 1.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 182 - 294 4e-08 Leucine-rich repeat region
LRR_14 PF23598 488 - 569 5e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G28440
fragaria_vesca FvH4_3g08530 FvH4_3g08530
malus_domestica MD05G1309900.v1.1 MD10G1288500.v1.1
prunus_persica Prupe.4G053100_v2.0.a1
pyrus_communis pycom05g28630
rosa_chinensis RchiOBHm_Chr5g0009311
rosa_laevigata RLG00000031647
rosa_multiflora Rmu_sc0006233.1_g000007
rosa_roxburghii Rroxscaffold_1G00066780 Rroxscaffold_1G00067480
rosa_rugosa Rorug04G0441700
rosa_samantha Rh5AG072200 Rh5BG068700 Rh5CG081100 Rh5DG068900
rosa_wichuraiana Rw5G006750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 191
AasI GACNNNNNNGTC 1 cut(s) 2077
AatII GACGTC 1 cut(s) 192
Acc36I ACCTGC 1 cut(s) 191
AccI GTMKAC 4 cut(s) 213, 510, 697, 1077
AccII CGCG 2 cut(s) 869, 1216
AccIII TCCGGA 1 cut(s) 463
AciI CCGC 7 cut(s) 262, 421, 611, 827, 1040, 1064, 1277
AclWI GGATC 2 cut(s) 601, 614
AcoI YGGCCR 1 cut(s) 1318
AcsI RAATTY 3 cut(s) 459, 1702, 1951
AcuI CTGAAG 1 cut(s) 866
AcvI CACGTG 1 cut(s) 336
AcyI GRCGYC 3 cut(s) 153, 189, 758
AdeI CACNNNGTG 1 cut(s) 660
AfaI GTAC 4 cut(s) 998, 1781, 1946, 2093
AfiI CCNNNNNNNGG 6 cut(s) 361, 379, 545, 620, 879, 886
AflIII ACRYGT 3 cut(s) 335, 867, 1214
AgeI ACCGGT 1 cut(s) 1236
AgsI TTSAA 6 cut(s) 229, 1388, 1421, 1708, 1723, 1957
AjnI CCWGG 3 cut(s) 137, 167, 1804
Alw21I GWGCWC 6 cut(s) 621, 798, 1005, 1299, 1581, 1755
AlwI GGATC 2 cut(s) 601, 614
Ama87I CYCGRG 5 cut(s) 451, 491, 598, 614, 1292
Aor13HI TCCGGA 1 cut(s) 463
AoxI GGCC 6 cut(s) 79, 171, 238, 890, 1318, 1962
ApeKI GCWGC 3 cut(s) 859, 1036, 1901
ApoI RAATTY 3 cut(s) 459, 1702, 1951
AsiGI ACCGGT 1 cut(s) 1236
Asp700I GAANNNNTTC 3 cut(s) 950, 1425, 1718
AspLEI GCGC 1 cut(s) 530
AspS9I GGNCC 9 cut(s) 171, 239, 496, 721, 746, 890, 1391, 1510, 2191
AsuC2I CCSGG 7 cut(s) 599, 600, 831, 913, 1102, 1606, 1747
AsuII TTCGAA 2 cut(s) 1085, 1661
AvaI CYCGRG 5 cut(s) 451, 491, 598, 614, 1292
AvaII GGWCC 6 cut(s) 496, 721, 746, 1391, 1510, 2191
BamHI GGATCC 1 cut(s) 606
BanII GRGCYC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
BarI GAAGNNNNNNTAC 2 cut(s) 1380, 1412
BbrPI CACGTG 1 cut(s) 336
Bbv12I GWGCWC 6 cut(s) 621, 798, 1005, 1299, 1581, 1755
BbvCI CCTCAGC 2 cut(s) 1067, 1880
BbvI GCAGC 3 cut(s) 846, 1023, 1888
BccI CCATC 4 cut(s) 311, 539, 1613, 2195
BcgI CGANNNNNNTGC 4 cut(s) 652, 686, 1318, 1352
BciT130I CCWGG 3 cut(s) 139, 169, 1806
BciVI GTATCC 1 cut(s) 1859
BclI TGATCA 1 cut(s) 1155
BcnI CCSGG 7 cut(s) 599, 600, 831, 913, 1102, 1606, 1747
BfmI CTRYAG 2 cut(s) 1430, 1974
BfoI RGCGCY 1 cut(s) 531
BfuAI ACCTGC 1 cut(s) 191
BfuI GTATCC 1 cut(s) 1859
BglI GCCNNNNNGGC 1 cut(s) 1326
BisI GCNGC 7 cut(s) 262, 827, 860, 1037, 1040, 1064, 1902
BlpI GCTNAGC 3 cut(s) 1499, 1848, 2105
BlsI GCNGC 7 cut(s) 263, 828, 861, 1038, 1041, 1065, 1903
Bme18I GGWCC 6 cut(s) 496, 721, 746, 1391, 1510, 2191
BmeT110I CYCGRG 5 cut(s) 451, 491, 598, 614, 1292
BmgT120I GGNCC 9 cut(s) 171, 239, 496, 721, 746, 890, 1391, 1510, 2191
BmiI GGNNCC 4 cut(s) 385, 608, 891, 2192
BmrI ACTGGG 1 cut(s) 2082
BmsI GCATC 5 cut(s) 186, 1137, 1576, 2155, 2261
BmuI ACTGGG 1 cut(s) 2082
BoxI GACNNNNGTC 2 cut(s) 779, 1217
BplI GAGNNNNNCTC 2 cut(s) 1537, 1569
BpmI CTGGAG 1 cut(s) 938
Bpu10I CCTNAGC 3 cut(s) 1004, 1067, 1880
Bpu1102I GCTNAGC 3 cut(s) 1499, 1848, 2105
Bpu14I TTCGAA 2 cut(s) 1085, 1661
BpuMI CCSGG 7 cut(s) 599, 600, 831, 913, 1102, 1606, 1747
BsaAI YACGTR 1 cut(s) 336
BsaHI GRCGYC 3 cut(s) 153, 189, 758
BsaJI CCNNGG 4 cut(s) 168, 598, 1746, 1905
BsaWI WCCGGW 7 cut(s) 463, 815, 1221, 1236, 1399, 1532, 1687
Bsc4I CCNNNNNNNGG 6 cut(s) 361, 379, 545, 620, 879, 886
Bse118I RCCGGY 7 cut(s) 173, 437, 879, 967, 1028, 1236, 1340
Bse1I ACTGG 2 cut(s) 1093, 2077
Bse3DI GCAATG 3 cut(s) 975, 1528, 2116
BseAI TCCGGA 1 cut(s) 463
BseBI CCWGG 3 cut(s) 139, 169, 1806
BseDI CCNNGG 4 cut(s) 168, 598, 1746, 1905
BseGI GGATG 2 cut(s) 531, 2252
BseLI CCNNNNNNNGG 6 cut(s) 361, 379, 545, 620, 879, 886
BseMI GCAATG 3 cut(s) 975, 1528, 2116
BseMII CTCAG 9 cut(s) 380, 715, 1018, 1058, 1464, 1471, 1839, 1871, 2096
BseNI ACTGG 2 cut(s) 1093, 2077
BseXI GCAGC 3 cut(s) 846, 1023, 1888
BseYI CCCAGC 2 cut(s) 691, 2014
BsgI GTGCAG 1 cut(s) 725
Bsh1236I CGCG 2 cut(s) 869, 1216
Bsh1285I CGRYCG 1 cut(s) 1692
BshFI GGCC 6 cut(s) 81, 173, 240, 892, 1320, 1964
BshTI ACCGGT 1 cut(s) 1236
BsiEI CGRYCG 1 cut(s) 1692
BsiHKAI GWGCWC 6 cut(s) 621, 798, 1005, 1299, 1581, 1755
BsiHKCI CYCGRG 5 cut(s) 451, 491, 598, 614, 1292
BslFI GGGAC 2 cut(s) 2083, 2129
BslI CCNNNNNNNGG 6 cut(s) 361, 379, 545, 620, 879, 886
BsmFI GGGAC 2 cut(s) 2083, 2129
BsnI GGCC 6 cut(s) 81, 173, 240, 892, 1320, 1964
BsoBI CYCGRG 5 cut(s) 451, 491, 598, 614, 1292
Bsp119I TTCGAA 2 cut(s) 1085, 1661
Bsp1286I GDGCHC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
Bsp13I TCCGGA 1 cut(s) 463
Bsp1407I TGTACA 2 cut(s) 1779, 2091
Bsp143I GATC 4 cut(s) 325, 606, 1155, 1654
Bsp1720I GCTNAGC 3 cut(s) 1499, 1848, 2105
BspACI CCGC 7 cut(s) 262, 421, 611, 827, 1040, 1064, 1277
BspANI GGCC 6 cut(s) 81, 173, 240, 892, 1320, 1964
BspCNI CTCAG 9 cut(s) 379, 714, 1017, 1059, 1465, 1470, 1840, 1872, 2097
BspEI TCCGGA 1 cut(s) 463
BspFNI CGCG 2 cut(s) 869, 1216
BspLI GGNNCC 4 cut(s) 385, 608, 891, 2192
BspMAI CTGCAG 1 cut(s) 1434
BspMI ACCTGC 1 cut(s) 191
BspPI GGATC 2 cut(s) 601, 614
BspT104I TTCGAA 2 cut(s) 1085, 1661
BsrDI GCAATG 3 cut(s) 975, 1528, 2116
BsrFI RCCGGY 7 cut(s) 173, 437, 879, 967, 1028, 1236, 1340
BsrGI TGTACA 2 cut(s) 1779, 2091
BsrI ACTGG 2 cut(s) 1093, 2077
BssAI RCCGGY 7 cut(s) 173, 437, 879, 967, 1028, 1236, 1340
BssECI CCNNGG 4 cut(s) 168, 598, 1746, 1905
BssMI GATC 4 cut(s) 325, 606, 1155, 1654
BssNI GRCGYC 3 cut(s) 153, 189, 758
BssT1I CCWWGG 1 cut(s) 1905
Bst2UI CCWGG 3 cut(s) 139, 169, 1806
Bst4CI ACNGT 4 cut(s) 202, 746, 950, 1639
Bst6I CTCTTC 2 cut(s) 40, 239
BstACI GRCGYC 3 cut(s) 153, 189, 758
BstAPI GCANNNNNTGC 1 cut(s) 183
BstAUI TGTACA 2 cut(s) 1779, 2091
BstBAI YACGTR 1 cut(s) 336
BstBI TTCGAA 2 cut(s) 1085, 1661
BstC8I GCNNGC 7 cut(s) 175, 824, 969, 973, 1034, 1189, 1505
BstEII GGTNACC 1 cut(s) 623
BstF5I GGATG 2 cut(s) 531, 2252
BstFNI CGCG 2 cut(s) 869, 1216
BstH2I RGCGCY 1 cut(s) 531
BstHHI GCGC 1 cut(s) 530
BstKTI GATC 4 cut(s) 328, 609, 1158, 1657
BstMBI GATC 4 cut(s) 325, 606, 1155, 1654
BstMCI CGRYCG 1 cut(s) 1692
BstMWI GCNNNNNNNGC 8 cut(s) 183, 734, 889, 913, 977, 1326, 1504, 1970
BstNI CCWGG 3 cut(s) 139, 169, 1806
BstNSI RCATGY 1 cut(s) 1283
BstPAI GACNNNNGTC 2 cut(s) 779, 1217
BstPI GGTNACC 1 cut(s) 623
BstSFI CTRYAG 2 cut(s) 1430, 1974
BstUI CGCG 2 cut(s) 869, 1216
BstV1I GCAGC 3 cut(s) 846, 1023, 1888
BstX2I RGATCY 1 cut(s) 606
BstXI CCANNNNNNTGG 1 cut(s) 2201
BstYI RGATCY 1 cut(s) 606
BsuI GTATCC 1 cut(s) 1859
BsuRI GGCC 6 cut(s) 81, 173, 240, 892, 1320, 1964
BtgZI GCGATG 1 cut(s) 2178
BtsCI GGATG 2 cut(s) 531, 2252
BtsI GCAGTG 1 cut(s) 2133
BtsIMutI CAGTG 2 cut(s) 1465, 2133
BveI ACCTGC 1 cut(s) 191
Cac8I GCNNGC 7 cut(s) 175, 824, 969, 973, 1034, 1189, 1505
CfoI GCGC 1 cut(s) 530
Cfr10I RCCGGY 7 cut(s) 173, 437, 879, 967, 1028, 1236, 1340
Cfr13I GGNCC 9 cut(s) 171, 239, 496, 721, 746, 890, 1391, 1510, 2191
Cfr9I CCCGGG 1 cut(s) 598
CpoI CGGWCCG 1 cut(s) 746
CseI GACGC 8 cut(s) 161, 747, 769, 858, 875, 1126, 1222, 1335
Csp6I GTAC 4 cut(s) 997, 1780, 1945, 2092
CspAI ACCGGT 1 cut(s) 1236
CspI CGGWCCG 1 cut(s) 746
CviAII CATG 2 cut(s) 874, 1280
CviQI GTAC 4 cut(s) 997, 1780, 1945, 2092
DpnI GATC 4 cut(s) 327, 608, 1157, 1656
DpnII GATC 4 cut(s) 325, 606, 1155, 1654
DraIII CACNNNGTG 1 cut(s) 660
DrdI GACNNNNNNGTC 1 cut(s) 2077
DseDI GACNNNNNNGTC 1 cut(s) 2077
EaeI YGGCCR 1 cut(s) 1318
Eam1104I CTCTTC 2 cut(s) 40, 239
EarI CTCTTC 2 cut(s) 40, 239
Ecl136II GAGCTC 6 cut(s) 619, 796, 1003, 1297, 1579, 1753
Eco130I CCWWGG 1 cut(s) 1905
Eco147I AGGCCT 1 cut(s) 81
Eco24I GRGCYC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
Eco32I GATATC 1 cut(s) 2001
Eco47I GGWCC 6 cut(s) 496, 721, 746, 1391, 1510, 2191
Eco53kI GAGCTC 6 cut(s) 619, 796, 1003, 1297, 1579, 1753
Eco57I CTGAAG 1 cut(s) 866
Eco72I CACGTG 1 cut(s) 336
Eco88I CYCGRG 5 cut(s) 451, 491, 598, 614, 1292
Eco91I GGTNACC 1 cut(s) 623
EcoICRI GAGCTC 6 cut(s) 619, 796, 1003, 1297, 1579, 1753
EcoO109I RGGNCCY 1 cut(s) 496
EcoO65I GGTNACC 1 cut(s) 623
EcoRII CCWGG 3 cut(s) 137, 167, 1804
EcoRV GATATC 1 cut(s) 2001
EcoT14I CCWWGG 1 cut(s) 1905
EcoT38I GRGCYC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
ErhI CCWWGG 1 cut(s) 1905
FaeI CATG 2 cut(s) 877, 1283
FaiI YATR 9 cut(s) 8, 801, 875, 1281, 1481, 1834, 1871, 1873, 2031
FaqI GGGAC 2 cut(s) 2083, 2129
FatI CATG 2 cut(s) 873, 1279
FauI CCCGC 1 cut(s) 618
FauNDI CATATG 1 cut(s) 1871
FbaI TGATCA 1 cut(s) 1155
FblI GTMKAC 4 cut(s) 213, 510, 697, 1077
Fnu4HI GCNGC 7 cut(s) 262, 827, 860, 1037, 1040, 1064, 1902
FokI GGATG 2 cut(s) 518, 2239
FriOI GRGCYC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
Fsp4HI GCNGC 7 cut(s) 262, 827, 860, 1037, 1040, 1064, 1902
GlaI GCGC 1 cut(s) 529
GluI GCNGC 7 cut(s) 262, 827, 860, 1037, 1040, 1064, 1902
GsaI CCCAGC 2 cut(s) 695, 2018
GsuI CTGGAG 1 cut(s) 938
HaeII RGCGCY 1 cut(s) 531
HaeIII GGCC 6 cut(s) 81, 173, 240, 892, 1320, 1964
HgaI GACGC 8 cut(s) 161, 747, 769, 858, 875, 1126, 1222, 1335
HhaI GCGC 1 cut(s) 530
Hin1I GRCGYC 3 cut(s) 153, 189, 758
Hin1II CATG 2 cut(s) 877, 1283
Hin6I GCGC 1 cut(s) 528
HinP1I GCGC 1 cut(s) 528
HincII GTYRAC 4 cut(s) 214, 698, 765, 2221
HindII GTYRAC 4 cut(s) 214, 698, 765, 2221
Hpy166II GTNNAC 9 cut(s) 214, 352, 511, 698, 765, 1078, 1992, 2092, 2221
Hpy188I TCNGA 9 cut(s) 325, 369, 606, 641, 750, 789, 1206, 1395, 1545
Hpy188III TCNNGA 7 cut(s) 453, 464, 475, 899, 1015, 1440, 1957
Hpy8I GTNNAC 9 cut(s) 214, 352, 511, 698, 765, 1078, 1992, 2092, 2221
Hpy99I CGWCG 8 cut(s) 116, 191, 215, 763, 785, 869, 905, 1120
HpyAV CCTTC 9 cut(s) 71, 235, 289, 330, 1123, 1382, 1523, 1954, 2176
HpyCH4III ACNGT 4 cut(s) 202, 746, 950, 1639
HpyCH4IV ACGT 4 cut(s) 189, 335, 1080, 2118
HpyCH4V TGCA 8 cut(s) 663, 742, 1432, 1567, 1699, 1769, 1887, 2126
HpyF10VI GCNNNNNNNGC 8 cut(s) 183, 734, 889, 913, 977, 1326, 1504, 1970
HpySE526I ACGT 4 cut(s) 189, 335, 1080, 2118
Hsp92I GRCGYC 3 cut(s) 153, 189, 758
Hsp92II CATG 2 cut(s) 877, 1283
HspAI GCGC 1 cut(s) 528
Kpn2I TCCGGA 1 cut(s) 463
KroI GCCGGC 2 cut(s) 173, 967
KroNI GCCGGC 2 cut(s) 175, 969
Ksp22I TGATCA 1 cut(s) 1155
Kzo9I GATC 4 cut(s) 325, 606, 1155, 1654
LmnI GCTCC 6 cut(s) 170, 389, 919, 1206, 1750, 1758
Lsp1109I GCAGC 3 cut(s) 846, 1023, 1888
LweI GCATC 5 cut(s) 186, 1137, 1576, 2155, 2261
MaeII ACGT 4 cut(s) 189, 335, 1080, 2118
MaeIII GTNAC 5 cut(s) 190, 202, 623, 704, 1229
MalI GATC 4 cut(s) 327, 608, 1157, 1656
MboI GATC 4 cut(s) 325, 606, 1155, 1654
MboII GAAGA 9 cut(s) 27, 226, 859, 1117, 1418, 1675, 2066, 2143, 2245
MflI RGATCY 1 cut(s) 606
MhlI GDGCHC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
MluCI AATT 7 cut(s) 459, 1582, 1623, 1645, 1702, 1723, 1951
MluI ACGCGT 2 cut(s) 867, 1214
MlyI GAGTC 4 cut(s) 116, 680, 693, 977
MmeI TCCRAC 3 cut(s) 115, 584, 1184
MroI TCCGGA 1 cut(s) 463
MroNI GCCGGC 2 cut(s) 173, 967
MroXI GAANNNNTTC 3 cut(s) 950, 1425, 1718
MseI TTAA 5 cut(s) 668, 732, 1241, 1941, 2263
MslI CAYNNNNRTG 2 cut(s) 1521, 1572
MspA1I CMGCKG 2 cut(s) 1066, 1312
MvaI CCWGG 3 cut(s) 139, 169, 1806
MvnI CGCG 2 cut(s) 869, 1216
MwoI GCNNNNNNNGC 8 cut(s) 183, 734, 889, 913, 977, 1326, 1504, 1970
NaeI GCCGGC 2 cut(s) 175, 969
NciI CCSGG 7 cut(s) 599, 600, 831, 913, 1102, 1606, 1747
NdeI CATATG 1 cut(s) 1871
NdeII GATC 4 cut(s) 325, 606, 1155, 1654
NgoMIV GCCGGC 2 cut(s) 173, 967
NlaIII CATG 2 cut(s) 877, 1283
NlaIV GGNNCC 4 cut(s) 385, 608, 891, 2192
NmeAIII GCCGAG 2 cut(s) 525, 1029
NmuCI GTSAC 3 cut(s) 190, 202, 1229
NspI RCATGY 1 cut(s) 1283
NspV TTCGAA 2 cut(s) 1085, 1661
PaeR7I CTCGAG 2 cut(s) 491, 1292
PaqCI CACCTGC 1 cut(s) 191
PceI AGGCCT 1 cut(s) 81
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 354
PdiI GCCGGC 2 cut(s) 175, 969
PdmI GAANNNNTTC 3 cut(s) 950, 1425, 1718
PfeI GAWTC 8 cut(s) 467, 480, 751, 895, 1045, 1108, 1180, 1801
PfoI TCCNGGA 3 cut(s) 137, 1100, 1604
PinAI ACCGGT 1 cut(s) 1236
PkrI GCNGC 7 cut(s) 263, 828, 861, 1038, 1041, 1065, 1903
PleI GAGTC 4 cut(s) 116, 680, 693, 977
PmaCI CACGTG 1 cut(s) 336
PmlI CACGTG 1 cut(s) 336
PpsI GAGTC 4 cut(s) 116, 680, 693, 977
Ppu21I YACGTR 1 cut(s) 336
PpuMI RGGWCCY 1 cut(s) 496
PshAI GACNNNNGTC 2 cut(s) 779, 1217
Psp124BI GAGCTC 6 cut(s) 621, 798, 1005, 1299, 1581, 1755
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 3 cut(s) 137, 167, 1804
PspCI CACGTG 1 cut(s) 336
PspEI GGTNACC 1 cut(s) 623
PspFI CCCAGC 2 cut(s) 691, 2014
PspGI CCWGG 3 cut(s) 137, 167, 1804
PspN4I GGNNCC 4 cut(s) 385, 608, 891, 2192
PspPI GGNCC 9 cut(s) 171, 239, 496, 721, 746, 890, 1391, 1510, 2191
PspPPI RGGWCCY 1 cut(s) 496
PspXI VCTCGAGB 2 cut(s) 491, 1292
PstI CTGCAG 1 cut(s) 1434
PsuI RGATCY 1 cut(s) 606
PvuII CAGCTG 1 cut(s) 1312
RsaI GTAC 4 cut(s) 998, 1781, 1946, 2093
RsaNI GTAC 4 cut(s) 997, 1780, 1945, 2092
RseI CAYNNNNRTG 2 cut(s) 1521, 1572
Rsr2I CGGWCCG 1 cut(s) 746
RsrII CGGWCCG 1 cut(s) 746
SacI GAGCTC 6 cut(s) 621, 798, 1005, 1299, 1581, 1755
SalI GTCGAC 2 cut(s) 212, 696
SaqAI TTAA 5 cut(s) 668, 732, 1241, 1941, 2263
SatI GCNGC 7 cut(s) 262, 827, 860, 1037, 1040, 1064, 1902
Sau3AI GATC 4 cut(s) 325, 606, 1155, 1654
Sau96I GGNCC 9 cut(s) 171, 239, 496, 721, 746, 890, 1391, 1510, 2191
SchI GAGTC 4 cut(s) 116, 680, 693, 977
SduI GDGCHC 7 cut(s) 386, 621, 798, 1005, 1299, 1581, 1755
SfaNI GCATC 5 cut(s) 186, 1137, 1576, 2155, 2261
SfcI CTRYAG 2 cut(s) 1430, 1974
Sfr274I CTCGAG 2 cut(s) 491, 1292
SfuI TTCGAA 2 cut(s) 1085, 1661
SgrAI CRCCGGYG 2 cut(s) 1028, 1340
SinI GGWCC 6 cut(s) 496, 721, 746, 1391, 1510, 2191
SlaI CTCGAG 2 cut(s) 491, 1292
SmaI CCCGGG 1 cut(s) 600
SmiMI CAYNNNNRTG 2 cut(s) 1521, 1572
SmlI CTYRAG 2 cut(s) 491, 1292
SmoI CTYRAG 2 cut(s) 491, 1292
Sse9I AATT 7 cut(s) 459, 1582, 1623, 1645, 1702, 1723, 1951
SseBI AGGCCT 1 cut(s) 81
SsiI CCGC 7 cut(s) 262, 421, 611, 827, 1040, 1064, 1277
SstI GAGCTC 6 cut(s) 621, 798, 1005, 1299, 1581, 1755
StuI AGGCCT 1 cut(s) 81
StyI CCWWGG 1 cut(s) 1905
TaaI ACNGT 4 cut(s) 202, 746, 950, 1639
TaiI ACGT 4 cut(s) 192, 338, 1083, 2121
TaqII GACCGA 1 cut(s) 1545
TasI AATT 7 cut(s) 459, 1582, 1623, 1645, 1702, 1723, 1951
TatI WGTACW 3 cut(s) 1779, 1944, 2091
TauI GCSGC 4 cut(s) 264, 829, 1042, 1066
TfiI GAWTC 8 cut(s) 467, 480, 751, 895, 1045, 1108, 1180, 1801
Tru1I TTAA 5 cut(s) 668, 732, 1241, 1941, 2263
Tru9I TTAA 5 cut(s) 668, 732, 1241, 1941, 2263
TscAI CASTG 2 cut(s) 1465, 2133
TseFI GTSAC 3 cut(s) 190, 202, 1229
TseI GCWGC 3 cut(s) 859, 1036, 1901
Tsp45I GTSAC 3 cut(s) 190, 202, 1229
TspDTI ATGAA 5 cut(s) 17, 271, 890, 1882, 2067
TspGWI ACGGA 1 cut(s) 199
TspMI CCCGGG 1 cut(s) 598
TspRI CASTG 2 cut(s) 1465, 2133
VpaK11BI GGWCC 6 cut(s) 496, 721, 746, 1391, 1510, 2191
XapI RAATTY 3 cut(s) 459, 1702, 1951
XceI RCATGY 1 cut(s) 1283
XhoI CTCGAG 2 cut(s) 491, 1292
XmaI CCCGGG 1 cut(s) 598
XmiI GTMKAC 4 cut(s) 213, 510, 697, 1077
XmnI GAANNNNTTC 3 cut(s) 950, 1425, 1718
ZraI GACGTC 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.