AT1G29230

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
10214681 .. 10216563
1883 bp
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UTR
Exon/CDS
Intron
AT1G29230.1

Sequence Viewer

Length: 1563 bp
ATGGCTCAAGCCTTGGCTCAACCACCACTGGTGGTCACCACCGTCGTCCCAGACCCGCCGCCGCCGCCACCACCACCGCACCCAAAGCCGTATGCTCTACGATACATGGCGGATCTTCTTGGCCGGATTGGTATAATGGATACAGACAAAGATGGTAACATCAGCCCACAGAGTCCGAGGAGTCCTAGGAGCCCAAGAAACAACATTCTCATGGGGAAGTACGAGCTTGGGAAGCTTCTCGGCCACGGAACCTTTGCAAAGGTTTATTTAGCTCAAAACATCAAATCTGGAGATAAAGTCGCCATTAAAGTCATCGACAAGGAGAAGATTATGAAGAGTGGTTTGGTTGCTCACATCAAACGGGAAATCTCTATCCTCCGCCGTGTCCGTCACCCTTACATCGTTCATCTATTCGAGGTTATGGCGACGAAGTCCAAGATTTACTTTGTGATGGAGTACGTTGGAGGCGGCGAGTTGTTCAACACGGTTGCTAAAGGTCGATTGCCCGAGGAAACTGCTCGGAGATATTTCCAGCAGCTGATCTCCTCTGTTTCGTTCTGCCATGGCCGCGGTGTTTACCACCGTGACCTTAAACCAGAGAATCTGCTTTTAGACAACAAAGGGAACCTTAAAGTATCTGACTTTGGTCTCAGCGCGGTGGCAGAGCAGCTTCGTCAAGACGGGCTCTGCCACACGTTTTGCGGGACTCCAGCGTATATTGCACCCGAGGTTTTGACTAGAAAAGGGTACGATGCAGCGAAAGCCGATGTTTGGTCATGTGGAGTGATCTTATTCGTGTTGATGGCTGGTCACATTCCGTTCTACGACAAGAACATAATGGTTATGTACAAGAAGATTTACAAAGGGGAATTTAGGTGTCCTCGTTGGTTTTCATCGGATCTTGTTCGGTTATTGACTCGGCTTCTTGATACGAATCCGGATACTCGGATTACAATACCCGAGATCATGAAGAACAGATGGTTCAAGAAAGGATTCAAACATGTTAAATTCTACATCGAAGATGATAAACTGTGTAGGGAAGATGAAGATGAGGAGGAAGAGGCATCATCATCAGGCCGCTCTTCGACAGTTTCAGAGAGCGATGCAGAGTTCGATGTAAAACGGATGGGAATAGGTTCAATGCCAAGACCCTCGAGCTTAAACGCGTTTGACATTATATCTTTCTCTTCAGGGTTTGATCTGTCTGGTTTGTTTGAGGAAGAAGGAGGAGAAGGGACGAGGTTTGTGTCAGGTGCTCCTGTTTCAAAGATCATATCGAAGCTGGAAGAGATTGCGAAAATCGTGAGCTTTACTGTGAGGAAGAAAGAATGGAGTTTGAGATTAGAAGGTTGTAGAGAAGGAGCAAAAGGACCGTTGACAATTGCGGCTGAGATATTTGAGCTGACTCCATCTCTAGTGGTGGTGGAGGTGAAGAAGAAAGGAGGAGACAGAGAAGAGTATGAAGAGTTTTGCAACAAGGAACTCAGACCAGAGCTGGAGAAACTAATCCATGAAGAAGTTGTAGTAGAAGAAGCATTGTATTTGCCATCTGATACTGAATAG

Protein Analysis

520

Amino Acids

58.54

Weight (kDa)

7.58

Isoelectric Point (pI)

53.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 74 - 328 1e-74 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 75 - 324 1.3e-37 Protein tyrosine and serine/threonine kinase
NAF PF03822 384 - 441 3e-24 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0009827)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1080
AccII CGCG 3 cut(s) 570, 656, 1166
AccIII TCCGGA 1 cut(s) 937
AclWI GGATC 2 cut(s) 120, 906
AcoI YGGCCR 3 cut(s) 121, 241, 565
AcsI RAATTY 2 cut(s) 869, 1007
AcuI CTGAAG 1 cut(s) 1173
AfaI GTAC 4 cut(s) 221, 458, 749, 848
AfiI CCNNNNNNNGG 1 cut(s) 771
AflIII ACRYGT 3 cut(s) 693, 1000, 1164
AgsI TTSAA 5 cut(s) 481, 985, 997, 1140, 1266
AjuI GAANNNNNNNTTGG 2 cut(s) 326, 358
Alw21I GWGCWC 1 cut(s) 1258
Alw26I GTCTC 2 cut(s) 653, 1440
AlwI GGATC 2 cut(s) 120, 906
AlwNI CAGNNNCTG 1 cut(s) 538
Ama87I CYCGRG 4 cut(s) 506, 725, 959, 1153
Aor13HI TCCGGA 1 cut(s) 937
AoxI GGCC 4 cut(s) 121, 241, 565, 1075
ApeKI GCWGC 3 cut(s) 535, 667, 755
ApoI RAATTY 2 cut(s) 869, 1007
Asp700I GAANNNNTTC 2 cut(s) 992, 1135
AspA2I CCTAGG 1 cut(s) 185
AspLEI GCGC 1 cut(s) 656
AspS9I GGNCC 1 cut(s) 1370
AsuHPI GGTGA 3 cut(s) 28, 383, 1441
AvaI CYCGRG 4 cut(s) 506, 725, 959, 1153
AvaII GGWCC 1 cut(s) 1370
AvrII CCTAGG 1 cut(s) 185
BanII GRGCYC 2 cut(s) 194, 687
Bbv12I GWGCWC 1 cut(s) 1258
BbvI GCAGC 3 cut(s) 547, 679, 767
BccI CCATC 7 cut(s) 146, 445, 796, 972, 1120, 1417, 1555
BceAI ACGGC 2 cut(s) 73, 366
BcgI CGANNNNNNTGC 2 cut(s) 497, 531
BciVI GTATCC 2 cut(s) 133, 934
BcoDI GTCTC 2 cut(s) 653, 1440
BfaI CTAG 3 cut(s) 186, 738, 1415
BfuI GTATCC 2 cut(s) 133, 934
BlnI CCTAGG 1 cut(s) 185
Bme18I GGWCC 1 cut(s) 1370
BmeT110I CYCGRG 4 cut(s) 506, 725, 959, 1153
BmgT120I GGNCC 1 cut(s) 1370
BmiI GGNNCC 3 cut(s) 191, 250, 626
BmsI GCATC 3 cut(s) 742, 1073, 1093
BoxI GACNNNNGTC 1 cut(s) 645
BpmI CTGGAG 3 cut(s) 309, 693, 1517
BsaBI GATNNNNATC 1 cut(s) 933
BsaI GGTCTC 1 cut(s) 653
BsaJI CCNNGG 8 cut(s) 12, 176, 185, 244, 507, 562, 568, 726
BsaWI WCCGGW 1 cut(s) 937
BsaXI ACNNNNNCTCC 2 cut(s) 282, 312
Bsc4I CCNNNNNNNGG 1 cut(s) 771
Bse1I ACTGG 1 cut(s) 33
Bse8I GATNNNNATC 1 cut(s) 933
BseAI TCCGGA 1 cut(s) 937
BseDI CCNNGG 8 cut(s) 12, 176, 185, 244, 507, 562, 568, 726
BseGI GGATG 1 cut(s) 1131
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 1 cut(s) 771
BseMII CTCAG 3 cut(s) 664, 1380, 1498
BseNI ACTGG 1 cut(s) 33
BseRI GAGGAG 5 cut(s) 193, 535, 1067, 1242, 1458
BseXI GCAGC 3 cut(s) 547, 679, 767
Bsh1236I CGCG 3 cut(s) 570, 656, 1166
BshFI GGCC 4 cut(s) 123, 243, 567, 1077
BsiHKAI GWGCWC 1 cut(s) 1258
BsiHKCI CYCGRG 4 cut(s) 506, 725, 959, 1153
BsiSI CCGG 2 cut(s) 124, 938
BslFI GGGAC 3 cut(s) 32, 718, 1249
BslI CCNNNNNNNGG 1 cut(s) 771
BsmAI GTCTC 2 cut(s) 653, 1440
BsmFI GGGAC 3 cut(s) 32, 718, 1249
BsnI GGCC 4 cut(s) 123, 243, 567, 1077
Bso31I GGTCTC 1 cut(s) 653
BsoBI CYCGRG 4 cut(s) 506, 725, 959, 1153
Bsp1286I GDGCHC 3 cut(s) 194, 687, 1258
Bsp13I TCCGGA 1 cut(s) 937
Bsp1407I TGTACA 1 cut(s) 846
Bsp143I GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
Bsp19I CCATGG 1 cut(s) 562
BspANI GGCC 4 cut(s) 123, 243, 567, 1077
BspCNI CTCAG 3 cut(s) 663, 1381, 1497
BspEI TCCGGA 1 cut(s) 937
BspFNI CGCG 3 cut(s) 570, 656, 1166
BspHI TCATGA 1 cut(s) 966
BspLI GGNNCC 3 cut(s) 191, 250, 626
BspPI GGATC 2 cut(s) 120, 906
BspQI GCTCTTC 1 cut(s) 1087
BspTNI GGTCTC 1 cut(s) 653
BsrBI CCGCTC 1 cut(s) 1080
BsrGI TGTACA 1 cut(s) 846
BsrI ACTGG 1 cut(s) 33
BssECI CCNNGG 8 cut(s) 12, 176, 185, 244, 507, 562, 568, 726
BssMI GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
BssT1I CCWWGG 3 cut(s) 12, 185, 562
Bst4CI ACNGT 7 cut(s) 43, 487, 584, 1032, 1090, 1315, 1374
Bst6I CTCTTC 7 cut(s) 329, 1053, 1087, 1192, 1281, 1449, 1458
BstAUI TGTACA 1 cut(s) 846
BstDEI CTNAG 3 cut(s) 650, 1389, 1484
BstDSI CCRYGG 3 cut(s) 244, 562, 568
BstEII GGTNACC 1 cut(s) 34
BstF5I GGATG 1 cut(s) 1131
BstFNI CGCG 3 cut(s) 570, 656, 1166
BstHHI GCGC 1 cut(s) 656
BstKTI GATC 7 cut(s) 115, 543, 789, 901, 966, 1201, 1272
BstMAI GTCTC 2 cut(s) 653, 1440
BstMBI GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
BstMWI GCNNNNNNNGC 6 cut(s) 64, 85, 232, 567, 719, 761
BstNSI RCATGY 1 cut(s) 1004
BstPAI GACNNNNGTC 1 cut(s) 645
BstPI GGTNACC 1 cut(s) 34
BstUI CGCG 3 cut(s) 570, 656, 1166
BstV1I GCAGC 3 cut(s) 547, 679, 767
BstX2I RGATCY 2 cut(s) 112, 898
BstYI RGATCY 2 cut(s) 112, 898
BsuI GTATCC 2 cut(s) 133, 934
BsuRI GGCC 4 cut(s) 123, 243, 567, 1077
BtgI CCRYGG 3 cut(s) 244, 562, 568
BtgZI GCGATG 1 cut(s) 1116
BtsCI GGATG 1 cut(s) 1131
BtsIMutI CAGTG 1 cut(s) 26
CaiI CAGNNNCTG 1 cut(s) 538
CciI TCATGA 1 cut(s) 966
CfoI GCGC 1 cut(s) 656
Cfr13I GGNCC 1 cut(s) 1370
Cfr42I CCGCGG 1 cut(s) 571
Csp6I GTAC 4 cut(s) 220, 457, 748, 847
CspCI CAANNNNNGTGG 2 cut(s) 680, 715
CviAII CATG 7 cut(s) 106, 211, 563, 777, 967, 1001, 1511
CviQI GTAC 4 cut(s) 220, 457, 748, 847
DdeI CTNAG 3 cut(s) 650, 1389, 1484
DpnI GATC 7 cut(s) 114, 542, 788, 900, 965, 1200, 1271
DpnII GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
EaeI YGGCCR 3 cut(s) 121, 241, 565
Eam1104I CTCTTC 7 cut(s) 329, 1053, 1087, 1192, 1281, 1449, 1458
EarI CTCTTC 7 cut(s) 329, 1053, 1087, 1192, 1281, 1449, 1458
EciI GGCGGA 2 cut(s) 125, 368
Eco130I CCWWGG 3 cut(s) 12, 185, 562
Eco24I GRGCYC 2 cut(s) 194, 687
Eco31I GGTCTC 1 cut(s) 653
Eco47I GGWCC 1 cut(s) 1370
Eco57I CTGAAG 1 cut(s) 1173
Eco88I CYCGRG 4 cut(s) 506, 725, 959, 1153
Eco91I GGTNACC 1 cut(s) 34
EcoO65I GGTNACC 1 cut(s) 34
EcoT14I CCWWGG 3 cut(s) 12, 185, 562
EcoT38I GRGCYC 2 cut(s) 194, 687
ErhI CCWWGG 3 cut(s) 12, 185, 562
FaeI CATG 7 cut(s) 109, 214, 566, 780, 970, 1004, 1514
FalI AAGNNNNNCTT 4 cut(s) 428, 460, 612, 644
FaqI GGGAC 3 cut(s) 32, 718, 1249
FatI CATG 7 cut(s) 105, 210, 562, 776, 966, 1000, 1510
FauI CCCGC 2 cut(s) 63, 695
FokI GGATG 1 cut(s) 1138
FriOI GRGCYC 2 cut(s) 194, 687
FspBI CTAG 3 cut(s) 186, 738, 1415
GlaI GCGC 1 cut(s) 655
GsuI CTGGAG 3 cut(s) 309, 693, 1517
HaeIII GGCC 4 cut(s) 123, 243, 567, 1077
HapII CCGG 2 cut(s) 124, 938
HhaI GCGC 1 cut(s) 656
Hin1II CATG 7 cut(s) 109, 214, 566, 780, 970, 1004, 1514
Hin6I GCGC 1 cut(s) 654
HinP1I GCGC 1 cut(s) 654
HincII GTYRAC 1 cut(s) 1377
HindII GTYRAC 1 cut(s) 1377
HindIII AAGCTT 1 cut(s) 233
HinfI GANTC 8 cut(s) 172, 181, 601, 706, 916, 934, 993, 1405
HpaII CCGG 2 cut(s) 124, 938
HphI GGTGA 3 cut(s) 28, 383, 1441
Hpy166II GTNNAC 2 cut(s) 577, 1377
Hpy188I TCNGA 8 cut(s) 177, 522, 640, 898, 948, 1096, 1487, 1552
Hpy188III TCNNGA 7 cut(s) 288, 677, 926, 938, 967, 985, 1303
Hpy8I GTNNAC 2 cut(s) 577, 1377
Hpy99I CGWCG 2 cut(s) 47, 430
HpyAV CCTTC 4 cut(s) 1217, 1226, 1340, 1352
HpyCH4III ACNGT 7 cut(s) 43, 487, 584, 1032, 1090, 1315, 1374
HpyCH4IV ACGT 2 cut(s) 459, 695
HpyCH4V TGCA 5 cut(s) 257, 722, 755, 1106, 1473
HpyF10VI GCNNNNNNNGC 6 cut(s) 64, 85, 232, 567, 719, 761
HpyF3I CTNAG 3 cut(s) 650, 1389, 1484
HpySE526I ACGT 2 cut(s) 459, 695
Hsp92II CATG 7 cut(s) 109, 214, 566, 780, 970, 1004, 1514
HspAI GCGC 1 cut(s) 654
Kpn2I TCCGGA 1 cut(s) 937
KspI CCGCGG 1 cut(s) 571
Kzo9I GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
LguI GCTCTTC 1 cut(s) 1087
LmnI GCTCC 3 cut(s) 189, 1261, 1361
Lsp1109I GCAGC 3 cut(s) 547, 679, 767
LweI GCATC 3 cut(s) 742, 1073, 1093
MaeI CTAG 3 cut(s) 186, 738, 1415
MaeII ACGT 2 cut(s) 459, 695
MaeIII GTNAC 5 cut(s) 34, 155, 389, 584, 809
MalI GATC 7 cut(s) 114, 542, 788, 900, 965, 1200, 1271
MbiI CCGCTC 1 cut(s) 1080
MboI GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
MfeI CAATTG 1 cut(s) 1380
MflI RGATCY 2 cut(s) 112, 898
MhlI GDGCHC 3 cut(s) 194, 687, 1258
MluCI AATT 3 cut(s) 869, 1007, 1380
MluI ACGCGT 1 cut(s) 1164
MlyI GAGTC 5 cut(s) 181, 190, 700, 910, 1399
MmeI TCCRAC 1 cut(s) 442
MroI TCCGGA 1 cut(s) 937
MroXI GAANNNNTTC 2 cut(s) 992, 1135
MseI TTAA 5 cut(s) 306, 591, 630, 1005, 1160
MslI CAYNNNNRTG 1 cut(s) 209
MspA1I CMGCKG 2 cut(s) 538, 570
MspI CCGG 2 cut(s) 124, 938
MunI CAATTG 1 cut(s) 1380
MvnI CGCG 3 cut(s) 570, 656, 1166
MwoI GCNNNNNNNGC 6 cut(s) 64, 85, 232, 567, 719, 761
NcoI CCATGG 1 cut(s) 562
NdeII GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
NlaIII CATG 7 cut(s) 109, 214, 566, 780, 970, 1004, 1514
NlaIV GGNNCC 3 cut(s) 191, 250, 626
NmeAIII GCCGAG 2 cut(s) 219, 898
NmuCI GTSAC 4 cut(s) 34, 389, 584, 809
NspI RCATGY 1 cut(s) 1004
PaeR7I CTCGAG 1 cut(s) 1153
PagI TCATGA 1 cut(s) 966
PciI ACATGT 1 cut(s) 1000
PciSI GCTCTTC 1 cut(s) 1087
PdmI GAANNNNTTC 2 cut(s) 992, 1135
PfeI GAWTC 3 cut(s) 601, 934, 993
PflFI GACNNNGTC 1 cut(s) 430
PleI GAGTC 5 cut(s) 180, 189, 700, 910, 1399
PpsI GAGTC 5 cut(s) 180, 189, 700, 910, 1399
PscI ACATGT 1 cut(s) 1000
PshAI GACNNNNGTC 1 cut(s) 645
PspEI GGTNACC 1 cut(s) 34
PspN4I GGNNCC 3 cut(s) 191, 250, 626
PspPI GGNCC 1 cut(s) 1370
PspXI VCTCGAGB 1 cut(s) 1153
PstNI CAGNNNCTG 1 cut(s) 538
PsuI RGATCY 2 cut(s) 112, 898
PsyI GACNNNGTC 1 cut(s) 430
PvuII CAGCTG 1 cut(s) 538
RsaI GTAC 4 cut(s) 221, 458, 749, 848
RsaNI GTAC 4 cut(s) 220, 457, 748, 847
RseI CAYNNNNRTG 1 cut(s) 209
SacII CCGCGG 1 cut(s) 571
SapI GCTCTTC 1 cut(s) 1087
SaqAI TTAA 5 cut(s) 306, 591, 630, 1005, 1160
Sau3AI GATC 7 cut(s) 112, 540, 786, 898, 963, 1198, 1269
Sau96I GGNCC 1 cut(s) 1370
SchI GAGTC 5 cut(s) 181, 190, 700, 910, 1399
SduI GDGCHC 3 cut(s) 194, 687, 1258
SfaNI GCATC 3 cut(s) 742, 1073, 1093
Sfr274I CTCGAG 1 cut(s) 1153
Sfr303I CCGCGG 1 cut(s) 571
SgrBI CCGCGG 1 cut(s) 571
SinI GGWCC 1 cut(s) 1370
SlaI CTCGAG 1 cut(s) 1153
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 2 cut(s) 6, 1153
SmoI CTYRAG 2 cut(s) 6, 1153
Sse9I AATT 3 cut(s) 869, 1007, 1380
SspMI CTAG 3 cut(s) 186, 738, 1415
StyI CCWWGG 3 cut(s) 12, 185, 562
TaaI ACNGT 7 cut(s) 43, 487, 584, 1032, 1090, 1315, 1374
TaiI ACGT 2 cut(s) 462, 698
TaqI TCGA 8 cut(s) 315, 414, 499, 1017, 1085, 1113, 1154, 1277
TasI AATT 3 cut(s) 869, 1007, 1380
TatI WGTACW 1 cut(s) 846
TauI GCSGC 7 cut(s) 61, 64, 67, 471, 570, 1080, 1388
TfiI GAWTC 3 cut(s) 601, 934, 993
Tru1I TTAA 5 cut(s) 306, 591, 630, 1005, 1160
Tru9I TTAA 5 cut(s) 306, 591, 630, 1005, 1160
TscAI CASTG 1 cut(s) 33
TseFI GTSAC 4 cut(s) 34, 389, 584, 809
TseI GCWGC 3 cut(s) 535, 667, 755
Tsp45I GTSAC 4 cut(s) 34, 389, 584, 809
TspDTI ATGAA 7 cut(s) 347, 395, 882, 983, 1059, 1476, 1527
TspGWI ACGGA 4 cut(s) 261, 377, 807, 1138
TspRI CASTG 1 cut(s) 33
Tth111I GACNNNGTC 1 cut(s) 430
VpaK11BI GGWCC 1 cut(s) 1370
XapI RAATTY 2 cut(s) 869, 1007
XceI RCATGY 1 cut(s) 1004
XhoI CTCGAG 1 cut(s) 1153
XmaJI CCTAGG 1 cut(s) 185
XmnI GAANNNNTTC 2 cut(s) 992, 1135
XspI CTAG 3 cut(s) 186, 738, 1415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.