Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0009827

Physical Location & Seq

Genomic Coordinates Reverse (-)

7012172 .. 7014027

Gene Structure 1856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG082000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGCTGAGCTCACCCAAAACGGCGCCGTCTCCTCCGCCGCCTCCAACACGTCGAAGACGAAGAACAACCCGCTCCTCCTGGGCCGCTTCGAAATCGGGAAGCTCCTCGGCCACGGAACCTTCGCGAAGGTGTACCACGCCCGCAACATCAAGACCGACGAGGGCGTCGCCATTAAGGTCATCGACAAAGAGAAGATCCTGAAGGGCGGTTTGATCGCCCACATCAAACGCGAGATCTCCATCCTCCGCCGCGTCCGCCACCCCAATATCGTCCAGCTCTTCGAAGTAATGGCCACCAAGGCCAAGATCTACTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCAACAAGGTCGCCAAGGGCCGCCTCAAGGAGGAGGTTGCCAGAAAGTACTTCCAGCAGTTAATCTCCGCCGTCGGATTCTGCCACGCCCGCGGGGTCTACCACCGCGACTTGAAGCCCGAGAATCTACTCCTCGACGAGAACGGAGATCTCAAAGTTTCGGATTTCGGGTTGAGTGCCGTCTCCGACGAAATCCGGCAGGACGGCATGTTTCACACGTTTTGCGGGACCCCGGCGTACGTGGCGCCGGAGGTTCTCGGCCGGAAGGGGTACGACGGAGCCAAGGTGGATATTTGGTCCTGTGGAGTGGTTTTATTTGTGCTTATGGCCGGGTACTTGCCTTTCCATGACCACAATGTCATGGCCATGTATAAGAAAATTTATAAGGGAGAGTTTCGGTGTCCGAGGTGGTTCAGCTCCGAGCTTGTCAGGTTGCTGACTAAGCTTTTGGATACGAACCCCAATACTCGGATCACCATTGCGGAGGTGATGGAGAATCGGTGGTTTAAGAAGGGTTTTAAGCATATTAAGTTTTACATTGACCATGATGATAGGCTGTGTAATGTTCATGAGGATGAGGAGGATGATAGTGATGCCAGCTCGGTGATGTCTGATCAGTCGTGTATGTCGGAATCCGAGGCCGAATTTGAGACCAGGAGAAAGCTTACATCTTTGCCGAGACCGGCGAGTTTGAATGCGTTTGATATAATATCGTTTTCGCCGGGGTTTGATTTGTCTGGCTTGTTTGAGGAGCGCGGGGAGGAGGCTAGGTTTGTGTCGGGTGCTCCGGTTGATAAGATAATATCGAAATTGGAGGAGATTGCGAAAGTGGTGAGCTTTTCGGTGAGGAAGAAGGATTGCAGGGTGAGCATGGAAGGGTCTAGAGAGGGTGTGAAGGGGCCGCTGACGATTGCGGCTGAGATATTCGAGTTGACACCGTCGTTGGTGGTGCTTGAAGTGAAGAAGAAAGCAGGGGACAGAACAGAGTATGAGCAGTTTTGTAATTCGGAGTTGAGACCCGGGTTGCAGAATTTGATGATTGAGGACTCTGCTGCAGCTTCTCTTGCTTCAGGAGGTTCGGTTGTGTCAGTAGGTTCTCCGTCTTCAGTTCATCATCTACCTTCGGATACTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

493

Amino Acids

55.03

Weight (kDa)

6.93

Isoelectric Point (pI)

41.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	30 - 284	1.2e-76	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	31 - 280	2e-38	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	125 - 272	2.4e-06	Kinase-like
NAF	PF03822	343 - 399	2.3e-23	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009827)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29230 AT2G34180 AT4G18700 AT5G45810
fragaria_vesca	FvH4_3g07620 FvH4_3g07620
malus_domestica	MD05G1298800.v1.1 MD10G1278300.v1.1
prunus_persica	Prupe.4G063100_v2.0.a1
pyrus_communis	pycom10g23220
rosa_chinensis	RchiOBHm_Chr5g0011071
rosa_laevigata	RLG00000031807
rosa_multiflora	Rmu_co8374009.1_g000001 Rmu_sc0003242.1_g000008
rosa_roxburghii	Rroxscaffold_1G00065340
rosa_rugosa	Rorug04G0455000
rosa_samantha	Rh5AG087200 Rh5BG082000 Rh5CG094800
rosa_wichuraiana	Rw0G000160 Rw0G017790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	729
AasI	GACNNNNNNGTC	2 cut(s)	164, 701
AccB1I	GGYRCC	2 cut(s)	23, 589
AccBSI	CCGCTC	1 cut(s)	73
AccI	GTMKAC	1 cut(s)	444
AccII	CGCG	7 cut(s)	125, 231, 252, 333, 438, 453, 1101
AclWI	GGATC	2 cut(s)	190, 824
AcoI	YGGCCR	5 cut(s)	109, 291, 604, 672, 708
AcsI	RAATTY	3 cut(s)	723, 989, 1375
AcuI	CTGAAG	3 cut(s)	221, 1398, 1434
AcyI	GRCGYC	3 cut(s)	24, 165, 590
AfaI	GTAC	6 cut(s)	134, 326, 395, 584, 617, 680
AfiI	CCNNNNNNNGG	3 cut(s)	373, 376, 813
AflIII	ACRYGT	2 cut(s)	48, 561
AgsI	TTSAA	4 cut(s)	349, 460, 1039, 1301
AjiI	CACGTC	1 cut(s)	51
AjnI	CCWGG	2 cut(s)	78, 998
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	3 cut(s)	12, 345, 1132
Alw26I	GTCTC	5 cut(s)	34, 532, 989, 1018, 1354
AlwI	GGATC	2 cut(s)	190, 824
Ama87I	CYCGRG	2 cut(s)	464, 1364
ApeKI	GCWGC	2 cut(s)	1397, 1400
ApoI	RAATTY	3 cut(s)	723, 989, 1375
ArsI	GACNNNNNNTTYG	2 cut(s)	775, 807
AspLEI	GCGC	3 cut(s)	26, 592, 1101
AspS9I	GGNCC	5 cut(s)	82, 364, 573, 642, 1244
AsuC2I	CCSGG	5 cut(s)	578, 676, 1068, 1365, 1366
AsuHPI	GGTGA	7 cut(s)	4, 811, 844, 961, 1189, 1201, 1222
AsuII	TTCGAA	2 cut(s)	90, 282
AvaI	CYCGRG	2 cut(s)	464, 1364
AvaII	GGWCC	2 cut(s)	573, 642
BalI	TGGCCA	2 cut(s)	293, 710
BanI	GGYRCC	2 cut(s)	23, 589
BanII	GRGCYC	2 cut(s)	12, 345
BbsI	GAAGAC	2 cut(s)	62, 1440
Bbv12I	GWGCWC	3 cut(s)	12, 345, 1132
BbvI	GCAGC	2 cut(s)	1384, 1412
BccI	CCATC	2 cut(s)	248, 829
BceAI	ACGGC	5 cut(s)	11, 37, 401, 509, 565
BciT130I	CCWGG	2 cut(s)	80, 1000
BciVI	GTATCC	2 cut(s)	790, 1465
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	5 cut(s)	578, 676, 1068, 1365, 1366
BcoDI	GTCTC	5 cut(s)	34, 532, 989, 1018, 1354
BfaI	CTAG	2 cut(s)	1113, 1227
BfmI	CTRYAG	1 cut(s)	1398
BfoI	RGCGCY	2 cut(s)	27, 593
BfuI	GTATCC	2 cut(s)	790, 1465
BglI	GCCNNNNNGGC	1 cut(s)	299
BglII	AGATCT	3 cut(s)	234, 306, 493
BlpI	GCTNAGC	1 cut(s)	6
BmcAI	AGTACT	1 cut(s)	395
Bme1390I	CCNGG	7 cut(s)	80, 578, 676, 1000, 1068, 1365, 1366
Bme18I	GGWCC	2 cut(s)	573, 642
BmeT110I	CYCGRG	2 cut(s)	464, 1364
BmgBI	CACGTC	1 cut(s)	51
BmgT120I	GGNCC	5 cut(s)	82, 364, 573, 642, 1244
BmiI	GGNNCC	7 cut(s)	25, 118, 574, 575, 591, 625, 1245
BmrFI	CCNGG	7 cut(s)	80, 578, 676, 1000, 1068, 1365, 1366
BmsI	GCATC	1 cut(s)	928
BpiI	GAAGAC	2 cut(s)	62, 1440
Bpu1102I	GCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	2 cut(s)	90, 282
BpuEI	CTTGAG	1 cut(s)	356
BpuMI	CCSGG	5 cut(s)	578, 676, 1068, 1365, 1366
BsaAI	YACGTR	1 cut(s)	586
BsaBI	GATNNNNATC	1 cut(s)	239
BsaHI	GRCGYC	3 cut(s)	24, 165, 590
BsaI	GGTCTC	3 cut(s)	989, 1018, 1354
BsaWI	WCCGGW	1 cut(s)	1132
BsaXI	ACNNNNNCTCC	8 cut(s)	615, 645, 830, 860, 1100, 1130, 1410, 1440
Bsc4I	CCNNNNNNNGG	3 cut(s)	373, 376, 813
Bse118I	RCCGGY	1 cut(s)	1027
Bse3DI	GCAATG	1 cut(s)	822
Bse8I	GATNNNNATC	1 cut(s)	239
BseBI	CCWGG	2 cut(s)	80, 1000
BseGI	GGATG	3 cut(s)	240, 925, 934
BseJI	GATNNNNATC	1 cut(s)	239
BseLI	CCNNNNNNNGG	3 cut(s)	373, 376, 813
BseMI	GCAATG	1 cut(s)	822
BseMII	CTCAG	1 cut(s)	1254
BseRI	GAGGAG	9 cut(s)	22, 65, 95, 392, 467, 938, 1109, 1121, 1175
BseX3I	CGGCCG	1 cut(s)	604
BseXI	GCAGC	2 cut(s)	1384, 1412
Bsh1236I	CGCG	7 cut(s)	125, 231, 252, 333, 438, 453, 1101
Bsh1285I	CGRYCG	1 cut(s)	607
BshNI	GGYRCC	2 cut(s)	23, 589
BsiEI	CGRYCG	1 cut(s)	607
BsiHKAI	GWGCWC	3 cut(s)	12, 345, 1132
BsiHKCI	CYCGRG	2 cut(s)	464, 1364
BsiSI	CCGG	9 cut(s)	541, 578, 593, 607, 675, 1028, 1067, 1133, 1365
BsiWI	CGTACG	1 cut(s)	582
BslFI	GGGAC	2 cut(s)	586, 1334
BslI	CCNNNNNNNGG	3 cut(s)	373, 376, 813
BsmAI	GTCTC	5 cut(s)	34, 532, 989, 1018, 1354
BsmBI	CGTCTC	2 cut(s)	34, 532
BsmFI	GGGAC	2 cut(s)	586, 1334
BsmI	GAATGC	1 cut(s)	1045
Bso31I	GGTCTC	3 cut(s)	989, 1018, 1354
BsoBI	CYCGRG	2 cut(s)	464, 1364
Bsp119I	TTCGAA	2 cut(s)	90, 282
Bsp1286I	GDGCHC	3 cut(s)	12, 345, 1132
Bsp143I	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
Bsp1720I	GCTNAGC	1 cut(s)	6
Bsp68I	TCGCGA	1 cut(s)	125
BspCNI	CTCAG	1 cut(s)	1255
BspFNI	CGCG	7 cut(s)	125, 231, 252, 333, 438, 453, 1101
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	7 cut(s)	25, 118, 574, 575, 591, 625, 1245
BspMAI	CTGCAG	1 cut(s)	1402
BspPI	GGATC	2 cut(s)	190, 824
BspQI	GCTCTTC	2 cut(s)	284, 350
BspT104I	TTCGAA	2 cut(s)	90, 282
BspT107I	GGYRCC	2 cut(s)	23, 589
BspTNI	GGTCTC	3 cut(s)	989, 1018, 1354
BsrBI	CCGCTC	1 cut(s)	73
BsrDI	GCAATG	1 cut(s)	822
BsrFI	RCCGGY	1 cut(s)	1027
BssAI	RCCGGY	1 cut(s)	1027
BssMI	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
BssNI	GRCGYC	3 cut(s)	24, 165, 590
BssT1I	CCWWGG	3 cut(s)	297, 360, 627
Bst2UI	CCWGG	2 cut(s)	80, 1000
Bst4CI	ACNGT	1 cut(s)	1284
Bst6I	CTCTTC	2 cut(s)	284, 350
BstACI	GRCGYC	3 cut(s)	24, 165, 590
BstBAI	YACGTR	1 cut(s)	586
BstBI	TTCGAA	2 cut(s)	90, 282
BstC8I	GCNNGC	4 cut(s)	142, 341, 436, 943
BstDEI	CTNAG	3 cut(s)	6, 786, 1263
BstDSI	CCRYGG	3 cut(s)	112, 331, 436
BstENI	CCTNNNNNAGG	1 cut(s)	374
BstF5I	GGATG	3 cut(s)	240, 925, 934
BstFNI	CGCG	7 cut(s)	125, 231, 252, 333, 438, 453, 1101
BstH2I	RGCGCY	2 cut(s)	27, 593
BstHHI	GCGC	3 cut(s)	26, 592, 1101
BstKTI	GATC	7 cut(s)	198, 216, 237, 309, 496, 819, 961
BstMAI	GTCTC	5 cut(s)	34, 532, 989, 1018, 1354
BstMBI	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
BstMCI	CGRYCG	1 cut(s)	607
BstMWI	GCNNNNNNNGC	7 cut(s)	255, 299, 435, 587, 787, 1212, 1409
BstNI	CCWGG	2 cut(s)	80, 1000
BstNSI	RCATGY	1 cut(s)	556
BstSCI	CCNGG	7 cut(s)	78, 576, 674, 998, 1066, 1363, 1364
BstSFI	CTRYAG	1 cut(s)	1398
BstUI	CGCG	7 cut(s)	125, 231, 252, 333, 438, 453, 1101
BstV1I	GCAGC	2 cut(s)	1384, 1412
BstV2I	GAAGAC	2 cut(s)	62, 1440
BstX2I	RGATCY	4 cut(s)	195, 234, 306, 493
BstYI	RGATCY	4 cut(s)	195, 234, 306, 493
BstZI	CGGCCG	1 cut(s)	604
BsuI	GTATCC	2 cut(s)	790, 1465
BtgI	CCRYGG	3 cut(s)	112, 331, 436
BtrI	CACGTC	1 cut(s)	51
BtsCI	GGATG	3 cut(s)	240, 925, 934
BtuMI	TCGCGA	1 cut(s)	125
Cac8I	GCNNGC	4 cut(s)	142, 341, 436, 943
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	3 cut(s)	26, 592, 1101
Cfr10I	RCCGGY	1 cut(s)	1027
Cfr13I	GGNCC	5 cut(s)	82, 364, 573, 642, 1244
Cfr42I	CCGCGG	2 cut(s)	334, 439
Cfr9I	CCCGGG	1 cut(s)	1364
CseI	GACGC	2 cut(s)	154, 241
Csp6I	GTAC	6 cut(s)	133, 325, 394, 583, 616, 679
CviAII	CATG	8 cut(s)	319, 553, 692, 706, 712, 890, 914, 1216
CviQI	GTAC	6 cut(s)	133, 325, 394, 583, 616, 679
DdeI	CTNAG	3 cut(s)	6, 786, 1263
DinI	GGCGCC	2 cut(s)	25, 591
DpnI	GATC	7 cut(s)	197, 215, 236, 308, 495, 818, 960
DpnII	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
DrdI	GACNNNNNNGTC	2 cut(s)	164, 701
DseDI	GACNNNNNNGTC	2 cut(s)	164, 701
EaeI	YGGCCR	5 cut(s)	109, 291, 604, 672, 708
EagI	CGGCCG	1 cut(s)	604
Eam1104I	CTCTTC	2 cut(s)	284, 350
EarI	CTCTTC	2 cut(s)	284, 350
EciI	GGCGGA	4 cut(s)	25, 236, 245, 403
Ecl136II	GAGCTC	2 cut(s)	10, 343
EclXI	CGGCCG	1 cut(s)	604
Eco130I	CCWWGG	3 cut(s)	297, 360, 627
Eco24I	GRGCYC	2 cut(s)	12, 345
Eco31I	GGTCTC	3 cut(s)	989, 1018, 1354
Eco47I	GGWCC	2 cut(s)	573, 642
Eco52I	CGGCCG	1 cut(s)	604
Eco53kI	GAGCTC	2 cut(s)	10, 343
Eco57I	CTGAAG	3 cut(s)	221, 1398, 1434
Eco88I	CYCGRG	2 cut(s)	464, 1364
EcoICRI	GAGCTC	2 cut(s)	10, 343
EcoNI	CCTNNNNNAGG	1 cut(s)	374
EcoO109I	RGGNCCY	1 cut(s)	573
EcoRII	CCWGG	2 cut(s)	78, 998
EcoT14I	CCWWGG	3 cut(s)	297, 360, 627
EcoT38I	GRGCYC	2 cut(s)	12, 345
EgeI	GGCGCC	2 cut(s)	25, 591
EheI	GGCGCC	2 cut(s)	25, 591
ErhI	CCWWGG	3 cut(s)	297, 360, 627
Esp3I	CGTCTC	2 cut(s)	34, 532
FaeI	CATG	8 cut(s)	322, 556, 695, 709, 715, 893, 917, 1219
FalI	AAGNNNNNCTT	2 cut(s)	296, 328
FaqI	GGGAC	2 cut(s)	586, 1334
FatI	CATG	8 cut(s)	318, 552, 691, 705, 711, 889, 913, 1215
FauI	CCCGC	6 cut(s)	78, 149, 431, 443, 563, 1094
FbaI	TGATCA	1 cut(s)	958
FblI	GTMKAC	1 cut(s)	444
FokI	GGATG	3 cut(s)	227, 932, 941
FriOI	GRGCYC	2 cut(s)	12, 345
FspBI	CTAG	2 cut(s)	1113, 1227
GlaI	GCGC	3 cut(s)	25, 591, 1100
HaeII	RGCGCY	2 cut(s)	27, 593
HapII	CCGG	9 cut(s)	541, 578, 593, 607, 675, 1028, 1067, 1133, 1365
HgaI	GACGC	2 cut(s)	154, 241
HhaI	GCGC	3 cut(s)	26, 592, 1101
Hin1I	GRCGYC	3 cut(s)	24, 165, 590
Hin1II	CATG	8 cut(s)	322, 556, 695, 709, 715, 893, 917, 1219
Hin6I	GCGC	3 cut(s)	24, 590, 1099
HinP1I	GCGC	3 cut(s)	24, 590, 1099
HincII	GTYRAC	1 cut(s)	1278
HindII	GTYRAC	1 cut(s)	1278
HindIII	AAGCTT	2 cut(s)	788, 1007
HinfI	GANTC	5 cut(s)	423, 469, 841, 977, 1391
HpaII	CCGG	9 cut(s)	541, 578, 593, 607, 675, 1028, 1067, 1133, 1365
HphI	GGTGA	7 cut(s)	4, 811, 844, 961, 1189, 1201, 1222
Hpy166II	GTNNAC	3 cut(s)	133, 445, 1278
Hpy188III	TCNNGA	7 cut(s)	97, 124, 151, 199, 914, 1227, 1416
Hpy8I	GTNNAC	3 cut(s)	133, 445, 1278
Hpy99I	CGWCG	8 cut(s)	55, 161, 170, 422, 485, 536, 623, 1288
HpyAV	CCTTC	9 cut(s)	121, 130, 196, 604, 850, 1192, 1214, 1234, 1476
HpyCH4III	ACNGT	1 cut(s)	1284
HpyCH4IV	ACGT	4 cut(s)	50, 327, 563, 585
HpyCH4V	TGCA	3 cut(s)	1206, 1372, 1400
HpyF10VI	GCNNNNNNNGC	7 cut(s)	255, 299, 435, 587, 787, 1212, 1409
HpyF3I	CTNAG	3 cut(s)	6, 786, 1263
HpySE526I	ACGT	4 cut(s)	50, 327, 563, 585
Hsp92I	GRCGYC	3 cut(s)	24, 165, 590
Hsp92II	CATG	8 cut(s)	322, 556, 695, 709, 715, 893, 917, 1219
HspAI	GCGC	3 cut(s)	24, 590, 1099
KasI	GGCGCC	2 cut(s)	23, 589
KflI	GGGWCCC	1 cut(s)	573
Ksp22I	TGATCA	1 cut(s)	958
KspI	CCGCGG	2 cut(s)	334, 439
Kzo9I	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
LguI	GCTCTTC	2 cut(s)	284, 350
LmnI	GCTCC	6 cut(s)	78, 108, 623, 767, 1096, 1135
Lsp1109I	GCAGC	2 cut(s)	1384, 1412
LweI	GCATC	1 cut(s)	928
MaeI	CTAG	2 cut(s)	1113, 1227
MaeII	ACGT	4 cut(s)	50, 327, 563, 585
MalI	GATC	7 cut(s)	197, 215, 236, 308, 495, 818, 960
MbiI	CCGCTC	1 cut(s)	73
MboI	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
MboII	GAAGA	9 cut(s)	67, 73, 205, 271, 337, 1207, 1318, 1321, 1440
MflI	RGATCY	4 cut(s)	195, 234, 306, 493
MhlI	GDGCHC	3 cut(s)	12, 345, 1132
MlsI	TGGCCA	2 cut(s)	293, 710
MluCI	AATT	5 cut(s)	723, 989, 1154, 1348, 1375
MluNI	TGGCCA	2 cut(s)	293, 710
Mly113I	GGCGCC	2 cut(s)	24, 590
MlyI	GAGTC	1 cut(s)	1385
MmeI	TCCRAC	4 cut(s)	69, 400, 555, 954
Mox20I	TGGCCA	2 cut(s)	293, 710
MscI	TGGCCA	2 cut(s)	293, 710
MseI	TTAA	5 cut(s)	174, 407, 852, 864, 873
MslI	CAYNNNNRTG	2 cut(s)	710, 918
Msp20I	TGGCCA	2 cut(s)	293, 710
MspA1I	CMGCKG	3 cut(s)	333, 438, 1249
MspI	CCGG	9 cut(s)	541, 578, 593, 607, 675, 1028, 1067, 1133, 1365
MspR9I	CCNGG	7 cut(s)	80, 578, 676, 1000, 1068, 1365, 1366
Mva1269I	GAATGC	1 cut(s)	1045
MvaI	CCWGG	2 cut(s)	80, 1000
MvnI	CGCG	7 cut(s)	125, 231, 252, 333, 438, 453, 1101
MwoI	GCNNNNNNNGC	7 cut(s)	255, 299, 435, 587, 787, 1212, 1409
NarI	GGCGCC	2 cut(s)	24, 590
NciI	CCSGG	5 cut(s)	578, 676, 1068, 1365, 1366
NdeII	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
NlaIII	CATG	8 cut(s)	322, 556, 695, 709, 715, 893, 917, 1219
NlaIV	GGNNCC	7 cut(s)	25, 118, 574, 575, 591, 625, 1245
NmeAIII	GCCGAG	3 cut(s)	87, 582, 1047
NruI	TCGCGA	1 cut(s)	125
NspI	RCATGY	1 cut(s)	556
NspV	TTCGAA	2 cut(s)	90, 282
PagI	TCATGA	1 cut(s)	913
PciSI	GCTCTTC	2 cut(s)	284, 350
PcsI	WCGNNNNNNNCGW	1 cut(s)	56
PctI	GAATGC	1 cut(s)	1045
PfeI	GAWTC	4 cut(s)	423, 469, 841, 977
Pfl23II	CGTACG	1 cut(s)	582
PflFI	GACNNNGTC	1 cut(s)	1282
PleI	GAGTC	1 cut(s)	1385
PluTI	GGCGCC	2 cut(s)	27, 593
PpsI	GAGTC	1 cut(s)	1385
Ppu21I	YACGTR	1 cut(s)	586
PpuMI	RGGWCCY	1 cut(s)	573
PsiI	TTATAA	1 cut(s)	729
Psp124BI	GAGCTC	2 cut(s)	12, 345
Psp5II	RGGWCCY	1 cut(s)	573
Psp6I	CCWGG	2 cut(s)	78, 998
PspGI	CCWGG	2 cut(s)	78, 998
PspLI	CGTACG	1 cut(s)	582
PspN4I	GGNNCC	7 cut(s)	25, 118, 574, 575, 591, 625, 1245
PspPI	GGNCC	5 cut(s)	82, 364, 573, 642, 1244
PspPPI	RGGWCCY	1 cut(s)	573
PstI	CTGCAG	1 cut(s)	1402
PsuI	RGATCY	4 cut(s)	195, 234, 306, 493
PsyI	GACNNNGTC	1 cut(s)	1282
RruI	TCGCGA	1 cut(s)	125
RsaI	GTAC	6 cut(s)	134, 326, 395, 584, 617, 680
RsaNI	GTAC	6 cut(s)	133, 325, 394, 583, 616, 679
RseI	CAYNNNNRTG	2 cut(s)	710, 918
SacI	GAGCTC	2 cut(s)	12, 345
SacII	CCGCGG	2 cut(s)	334, 439
SapI	GCTCTTC	2 cut(s)	284, 350
SaqAI	TTAA	5 cut(s)	174, 407, 852, 864, 873
Sau3AI	GATC	7 cut(s)	195, 213, 234, 306, 493, 816, 958
Sau96I	GGNCC	5 cut(s)	82, 364, 573, 642, 1244
ScaI	AGTACT	1 cut(s)	395
SchI	GAGTC	1 cut(s)	1385
ScrFI	CCNGG	7 cut(s)	80, 578, 676, 1000, 1068, 1365, 1366
SduI	GDGCHC	3 cut(s)	12, 345, 1132
SfaNI	GCATC	1 cut(s)	928
SfcI	CTRYAG	1 cut(s)	1398
SfiI	GGCCNNNNNGGCC	1 cut(s)	299
SfoI	GGCGCC	2 cut(s)	25, 591
Sfr303I	CCGCGG	2 cut(s)	334, 439
SfuI	TTCGAA	2 cut(s)	90, 282
SgrBI	CCGCGG	2 cut(s)	334, 439
SinI	GGWCC	2 cut(s)	573, 642
SmaI	CCCGGG	1 cut(s)	1366
SmiMI	CAYNNNNRTG	2 cut(s)	710, 918
SmlI	CTYRAG	1 cut(s)	371
SmoI	CTYRAG	1 cut(s)	371
Sse9I	AATT	5 cut(s)	723, 989, 1154, 1348, 1375
SspDI	GGCGCC	2 cut(s)	23, 589
SspMI	CTAG	2 cut(s)	1113, 1227
SstI	GAGCTC	2 cut(s)	12, 345
StyD4I	CCNGG	7 cut(s)	78, 576, 674, 998, 1066, 1363, 1364
StyI	CCWWGG	3 cut(s)	297, 360, 627
TaaI	ACNGT	1 cut(s)	1284
TaiI	ACGT	4 cut(s)	53, 330, 566, 588
TaqI	TCGA	7 cut(s)	53, 90, 183, 282, 480, 1151, 1272
TaqII	GACCGA	1 cut(s)	170
TasI	AATT	5 cut(s)	723, 989, 1154, 1348, 1375
TatI	WGTACW	1 cut(s)	393
TauI	GCSGC	8 cut(s)	41, 87, 252, 336, 339, 369, 1249, 1262
TfiI	GAWTC	4 cut(s)	423, 469, 841, 977
Tru1I	TTAA	5 cut(s)	174, 407, 852, 864, 873
Tru9I	TTAA	5 cut(s)	174, 407, 852, 864, 873
TseI	GCWGC	2 cut(s)	1397, 1400
TspDTI	ATGAA	2 cut(s)	902, 1445
TspGWI	ACGGA	4 cut(s)	129, 504, 636, 1434
TspMI	CCCGGG	1 cut(s)	1364
Tth111I	GACNNNGTC	1 cut(s)	1282
VpaK11BI	GGWCC	2 cut(s)	573, 642
XagI	CCTNNNNNAGG	1 cut(s)	374
XapI	RAATTY	3 cut(s)	723, 989, 1375
XbaI	TCTAGA	1 cut(s)	1226
XceI	RCATGY	1 cut(s)	556
XmaI	CCCGGG	1 cut(s)	1364
XmiI	GTMKAC	1 cut(s)	444
XspI	CTAG	2 cut(s)	1113, 1227
ZrmI	AGTACT	1 cut(s)	395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.