Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009827

Physical Location & Seq

Genomic Coordinates Forward (+)

18584676 .. 18586590

Gene Structure 1915 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G45810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGCGGATTTGTTAAGAAAAGTGAAATCGATAAAGAAGAAGCAGGATCAGAGCAATCATCAAGCTCTGATCCTTGGCAAATACGAAATGGGTAGGCTTCTTGGCCACGGAACCTTCGCTAAAGTCTATCTCGCACGAAACGCTCAATCTGGAGAAAGCGTAGCGATCAAGGTAATTGACAAAGAGAAAGTTCTCAAATCCGGTTTAATCGCACACATCAAACGCGAGATCTCGATCTTGCGCCGTGTTCGTCATCCTAACATCGTTCAGCTATTCGAAGTCATGGCGACGAAATCTAAGATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCTAAAGGAAGGTTAAAAGAAGAAATGGCACGTAAATATTTTCAACAGTTGATCTCAGCCGTATCGTTTTGTCACTTCCGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTTTTAGACGAAAATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCAGATTCGACAAGATGGGTTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGGAGGTTCTTGCTCGGAAAGGCTACGATGGAGCTAAAGTCGATATTTGGTCTTGTGGAGTGATCTTGTTTGTGTTAATGGCAGGGTTTCTTCCTTTTCATGATCGGAATGTTATGGCTATGTATAAGAAGATTTACAGAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAACCGGTTATTGATTCGAATGTTGGAGACTAAACCGGAGAGACGGTTTACAATGCCGGATATTATGGAGACTAGTTGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAGATGATCATCAGCTTTGTAACGTTGCTGATGATGATGAGATCGAATCGATTGAATCGGTTTCGGGGAGGTCTTCTACGGTTTCTGAACCGGAAGACTTCGAGTCTTTTGATGGGAGGAGAAGAGGTGGTTCGATGCCTAGACCGGCAAGTTTGAATGCTTTCGATCTCATTTCGTTTTCGCCAGGTTTTGATCTTTCGGGTTTGTTTGAGGATGATGGTGAAGGATCTAGGTTTGTGTCTGGTGCTCCTGTTGGTCAGATCATTTCTAAGTTGGAGGAAATCGCGAGGATTGTGAGTTTTACTGTGCGAAAGAAGGATTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTATGAAAGGTCCATTGTCAATTGCTGCTGAGATATTTGAACTGACACCAGCTTTGGTTGTTGTTGAAGTGAAGAAGAAAGGAGGTGATAAAATGGAGTATGATGAGTTTTGTAATAAGGAGTTGAAACCTAAGTTGCAGAATTTGTCTTCCGAAAATGGCCAACGGGTTTCTGGTTCGCGTTCTTTGCCATCGTTTTTACTTTCTGATACTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

483

Amino Acids

54.62

Weight (kDa)

8.97

Isoelectric Point (pI)

44.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	28 - 282	1.3e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	29 - 278	3.5e-38	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	122 - 270	5.6e-07	Kinase-like
NAF	PF03822	342 - 398	1e-21	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009827)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29230 AT2G34180 AT4G18700 AT5G45810
fragaria_vesca	FvH4_3g07620 FvH4_3g07620
malus_domestica	MD05G1298800.v1.1 MD10G1278300.v1.1
prunus_persica	Prupe.4G063100_v2.0.a1
pyrus_communis	pycom10g23220
rosa_chinensis	RchiOBHm_Chr5g0011071
rosa_laevigata	RLG00000031807
rosa_multiflora	Rmu_co8374009.1_g000001 Rmu_sc0003242.1_g000008
rosa_roxburghii	Rroxscaffold_1G00065340
rosa_rugosa	Rorug04G0455000
rosa_samantha	Rh5AG087200 Rh5BG082000 Rh5CG094800
rosa_wichuraiana	Rw0G000160 Rw0G017790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	583
AccII	CGCG	3 cut(s)	225, 1166, 1414
AciI	CCGC	1 cut(s)	5
AclI	AACGTT	1 cut(s)	903
AclWI	GGATC	3 cut(s)	54, 64, 1114
AcoI	YGGCCR	2 cut(s)	103, 1393
AcsI	RAATTY	1 cut(s)	1375
AgeI	ACCGGT	1 cut(s)	768
AhdI	GACNNNNNGTC	1 cut(s)	982
AhlI	ACTAGT	1 cut(s)	836
AjnI	CCWGG	1 cut(s)	1063
AleI	CACNNNNGTG	1 cut(s)	429
AluBI	AGCT	6 cut(s)	65, 271, 353, 620, 895, 1286
AluI	AGCT	6 cut(s)	65, 271, 353, 620, 895, 1286
Alw21I	GWGCWC	1 cut(s)	1129
Alw26I	GTCTC	4 cut(s)	502, 785, 799, 827
AlwI	GGATC	3 cut(s)	54, 64, 1114
AoxI	GGCC	2 cut(s)	103, 1393
ApeKI	GCWGC	1 cut(s)	1259
ApoI	RAATTY	1 cut(s)	1375
ArsI	GACNNNNNNTTYG	2 cut(s)	1270, 1302
AsiGI	ACCGGT	1 cut(s)	768
Asp700I	GAANNNNTTC	1 cut(s)	1040
AspLEI	GCGC	1 cut(s)	243
AspS9I	GGNCC	2 cut(s)	567, 1244
AsuHPI	GGTGA	3 cut(s)	344, 1112, 1331
AsuII	TTCGAA	2 cut(s)	276, 781
AvaII	GGWCC	2 cut(s)	567, 1244
BalI	TGGCCA	2 cut(s)	105, 1395
BanI	GGYRCC	1 cut(s)	583
BbsI	GAAGAC	3 cut(s)	945, 981, 1374
Bbv12I	GWGCWC	1 cut(s)	1129
BbvI	GCAGC	1 cut(s)	1246
BccI	CCATC	6 cut(s)	536, 608, 741, 986, 1091, 1432
BceAI	ACGGC	2 cut(s)	228, 395
BciT130I	CCWGG	1 cut(s)	1065
BclI	TGATCA	2 cut(s)	526, 886
BcoDI	GTCTC	4 cut(s)	502, 785, 799, 827
BcuI	ACTAGT	1 cut(s)	836
BfaI	CTAG	3 cut(s)	837, 1020, 1110
BglII	AGATCT	2 cut(s)	228, 300
BisI	GCNGC	1 cut(s)	1260
BlsI	GCNGC	1 cut(s)	1261
Bme1390I	CCNGG	1 cut(s)	1065
Bme18I	GGWCC	2 cut(s)	567, 1244
BmeRI	GACNNNNNGTC	1 cut(s)	982
BmgT120I	GGNCC	2 cut(s)	567, 1244
BmiI	GGNNCC	4 cut(s)	112, 568, 569, 585
BmrFI	CCNGG	1 cut(s)	1065
BmsI	GCATC	1 cut(s)	1005
BpiI	GAAGAC	3 cut(s)	945, 981, 1374
BpmI	CTGGAG	1 cut(s)	171
Bpu14I	TTCGAA	2 cut(s)	276, 781
Bsa29I	ATCGAT	2 cut(s)	29, 929
BsaAI	YACGTR	2 cut(s)	383, 580
BsaBI	GATNNNNATC	2 cut(s)	233, 888
BsaJI	CCNNGG	3 cut(s)	73, 106, 430
BsaWI	WCCGGW	7 cut(s)	200, 457, 586, 754, 768, 799, 970
BsaXI	ACNNNNNCTCC	8 cut(s)	144, 174, 609, 639, 794, 824, 991, 1021
Bse118I	RCCGGY	2 cut(s)	768, 1024
Bse8I	GATNNNNATC	2 cut(s)	233, 888
BseBI	CCWGG	1 cut(s)	1065
BseCI	ATCGAT	2 cut(s)	29, 929
BseDI	CCNNGG	3 cut(s)	73, 106, 430
BseGI	GGATG	2 cut(s)	253, 1099
BseJI	GATNNNNATC	2 cut(s)	233, 888
BseMII	CTCAG	2 cut(s)	420, 1254
BseRI	GAGGAG	2 cut(s)	741, 1012
BseXI	GCAGC	1 cut(s)	1246
Bsh1236I	CGCG	3 cut(s)	225, 1166, 1414
BshFI	GGCC	2 cut(s)	105, 1395
BshNI	GGYRCC	1 cut(s)	583
BshTI	ACCGGT	1 cut(s)	768
BshVI	ATCGAT	2 cut(s)	29, 929
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiSI	CCGG	9 cut(s)	201, 458, 587, 755, 769, 800, 821, 971, 1025
BslFI	GGGAC	1 cut(s)	580
BsmAI	GTCTC	4 cut(s)	502, 785, 799, 827
BsmBI	CGTCTC	1 cut(s)	799
BsmFI	GGGAC	1 cut(s)	580
BsmI	GAATGC	1 cut(s)	1042
BsnI	GGCC	2 cut(s)	105, 1395
Bsp119I	TTCGAA	2 cut(s)	276, 781
Bsp1286I	GDGCHC	1 cut(s)	1129
Bsp68I	TCGCGA	1 cut(s)	1166
BspACI	CCGC	1 cut(s)	5
BspANI	GGCC	2 cut(s)	105, 1395
BspCNI	CTCAG	2 cut(s)	419, 1255
BspDI	ATCGAT	2 cut(s)	29, 929
BspFNI	CGCG	3 cut(s)	225, 1166, 1414
BspHI	TCATGA	1 cut(s)	685
BspLI	GGNNCC	4 cut(s)	112, 568, 569, 585
BspPI	GGATC	3 cut(s)	54, 64, 1114
BspT104I	TTCGAA	2 cut(s)	276, 781
BspT107I	GGYRCC	1 cut(s)	583
BsrFI	RCCGGY	2 cut(s)	768, 1024
BssAI	RCCGGY	2 cut(s)	768, 1024
BssECI	CCNNGG	3 cut(s)	73, 106, 430
BssT1I	CCWWGG	1 cut(s)	73
Bst2UI	CCWGG	1 cut(s)	1065
Bst4CI	ACNGT	4 cut(s)	399, 810, 961, 1186
Bst6I	CTCTTC	1 cut(s)	997
BstBAI	YACGTR	2 cut(s)	383, 580
BstBI	TTCGAA	2 cut(s)	276, 781
BstDEI	CTNAG	6 cut(s)	297, 406, 512, 1149, 1263, 1365
BstDSI	CCRYGG	2 cut(s)	106, 430
BstF5I	GGATG	2 cut(s)	253, 1099
BstFNI	CGCG	3 cut(s)	225, 1166, 1414
BstHHI	GCGC	1 cut(s)	243
BstMAI	GTCTC	4 cut(s)	502, 785, 799, 827
BstMWI	GCNNNNNNNGC	3 cut(s)	140, 581, 1420
BstNI	CCWGG	1 cut(s)	1065
BstSCI	CCNGG	1 cut(s)	1063
BstUI	CGCG	3 cut(s)	225, 1166, 1414
BstV1I	GCAGC	1 cut(s)	1246
BstV2I	GAAGAC	3 cut(s)	945, 981, 1374
BstX2I	RGATCY	3 cut(s)	228, 300, 1106
BstYI	RGATCY	3 cut(s)	228, 300, 1106
Bsu15I	ATCGAT	2 cut(s)	29, 929
BsuRI	GGCC	2 cut(s)	105, 1395
BsuTUI	ATCGAT	2 cut(s)	29, 929
BtgI	CCRYGG	2 cut(s)	106, 430
BtsCI	GGATG	2 cut(s)	253, 1099
BtuMI	TCGCGA	1 cut(s)	1166
CciI	TCATGA	1 cut(s)	685
CfoI	GCGC	1 cut(s)	243
Cfr10I	RCCGGY	2 cut(s)	768, 1024
Cfr13I	GGNCC	2 cut(s)	567, 1244
ClaI	ATCGAT	2 cut(s)	29, 929
CspAI	ACCGGT	1 cut(s)	768
CviAII	CATG	2 cut(s)	283, 686
DdeI	CTNAG	6 cut(s)	297, 406, 512, 1149, 1263, 1365
DriI	GACNNNNNGTC	1 cut(s)	982
EaeI	YGGCCR	2 cut(s)	103, 1393
Eam1104I	CTCTTC	1 cut(s)	997
Eam1105I	GACNNNNNGTC	1 cut(s)	982
EarI	CTCTTC	1 cut(s)	997
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	73
Eco47I	GGWCC	2 cut(s)	567, 1244
EcoO109I	RGGNCCY	1 cut(s)	567
EcoRII	CCWGG	1 cut(s)	1063
EcoT14I	CCWWGG	1 cut(s)	73
ErhI	CCWWGG	1 cut(s)	73
Esp3I	CGTCTC	1 cut(s)	799
FaeI	CATG	2 cut(s)	286, 689
FalI	AAGNNNNNCTT	2 cut(s)	1197, 1229
FaqI	GGGAC	1 cut(s)	580
FatI	CATG	2 cut(s)	282, 685
FbaI	TGATCA	2 cut(s)	526, 886
Fnu4HI	GCNGC	1 cut(s)	1260
FokI	GGATG	2 cut(s)	240, 1106
Fsp4HI	GCNGC	1 cut(s)	1260
FspBI	CTAG	3 cut(s)	837, 1020, 1110
GlaI	GCGC	1 cut(s)	242
GluI	GCNGC	1 cut(s)	1260
GsuI	CTGGAG	1 cut(s)	171
HaeIII	GGCC	2 cut(s)	105, 1395
HapII	CCGG	9 cut(s)	201, 458, 587, 755, 769, 800, 821, 971, 1025
HhaI	GCGC	1 cut(s)	243
Hin1II	CATG	2 cut(s)	286, 689
Hin6I	GCGC	1 cut(s)	241
HinP1I	GCGC	1 cut(s)	241
HinfI	GANTC	7 cut(s)	463, 532, 778, 926, 935, 983, 1210
HpaII	CCGG	9 cut(s)	201, 458, 587, 755, 769, 800, 821, 971, 1025
HphI	GGTGA	3 cut(s)	344, 1112, 1331
Hpy166II	GTNNAC	1 cut(s)	813
Hpy188III	TCNNGA	8 cut(s)	150, 232, 446, 686, 847, 1165, 1214, 1224
Hpy8I	GTNNAC	1 cut(s)	813
Hpy99I	CGWCG	1 cut(s)	292
HpyAV	CCTTC	6 cut(s)	124, 354, 1097, 1189, 1211, 1223
HpyCH4III	ACNGT	4 cut(s)	399, 810, 961, 1186
HpyCH4IV	ACGT	3 cut(s)	382, 579, 903
HpyCH4V	TGCA	1 cut(s)	1372
HpyF10VI	GCNNNNNNNGC	3 cut(s)	140, 581, 1420
HpyF3I	CTNAG	6 cut(s)	297, 406, 512, 1149, 1263, 1365
HpySE526I	ACGT	3 cut(s)	382, 579, 903
Hsp92II	CATG	2 cut(s)	286, 689
HspAI	GCGC	1 cut(s)	241
KflI	GGGWCCC	1 cut(s)	567
Ksp22I	TGATCA	2 cut(s)	526, 886
LmnI	GCTCC	2 cut(s)	617, 1132
Lsp1109I	GCAGC	1 cut(s)	1246
LweI	GCATC	1 cut(s)	1005
MaeI	CTAG	3 cut(s)	837, 1020, 1110
MaeII	ACGT	3 cut(s)	382, 579, 903
MaeIII	GTNAC	2 cut(s)	422, 899
MfeI	CAATTG	1 cut(s)	1254
MflI	RGATCY	3 cut(s)	228, 300, 1106
MhlI	GDGCHC	1 cut(s)	1129
MlsI	TGGCCA	2 cut(s)	105, 1395
MluCI	AATT	4 cut(s)	174, 335, 1254, 1375
MluNI	TGGCCA	2 cut(s)	105, 1395
MlyI	GAGTC	2 cut(s)	992, 1219
MmeI	TCCRAC	2 cut(s)	768, 1134
Mox20I	TGGCCA	2 cut(s)	105, 1395
MroXI	GAANNNNTTC	1 cut(s)	1040
MscI	TGGCCA	2 cut(s)	105, 1395
MseI	TTAA	8 cut(s)	14, 206, 324, 365, 662, 765, 858, 867
MslI	CAYNNNNRTG	1 cut(s)	429
Msp20I	TGGCCA	2 cut(s)	105, 1395
MspI	CCGG	9 cut(s)	201, 458, 587, 755, 769, 800, 821, 971, 1025
MspR9I	CCNGG	1 cut(s)	1065
MunI	CAATTG	1 cut(s)	1254
Mva1269I	GAATGC	1 cut(s)	1042
MvaI	CCWGG	1 cut(s)	1065
MvnI	CGCG	3 cut(s)	225, 1166, 1414
MwoI	GCNNNNNNNGC	3 cut(s)	140, 581, 1420
NlaIII	CATG	2 cut(s)	286, 689
NlaIV	GGNNCC	4 cut(s)	112, 568, 569, 585
NmuCI	GTSAC	1 cut(s)	422
NruI	TCGCGA	1 cut(s)	1166
NspV	TTCGAA	2 cut(s)	276, 781
OliI	CACNNNNGTG	1 cut(s)	429
PagI	TCATGA	1 cut(s)	685
PctI	GAATGC	1 cut(s)	1042
PdmI	GAANNNNTTC	1 cut(s)	1040
PfeI	GAWTC	5 cut(s)	463, 532, 778, 926, 935
PinAI	ACCGGT	1 cut(s)	768
PkrI	GCNGC	1 cut(s)	1261
PleI	GAGTC	2 cut(s)	991, 1218
PpsI	GAGTC	2 cut(s)	991, 1218
Ppu21I	YACGTR	2 cut(s)	383, 580
PpuMI	RGGWCCY	1 cut(s)	567
Psp1406I	AACGTT	1 cut(s)	903
Psp5II	RGGWCCY	1 cut(s)	567
Psp6I	CCWGG	1 cut(s)	1063
PspGI	CCWGG	1 cut(s)	1063
PspN4I	GGNNCC	4 cut(s)	112, 568, 569, 585
PspPI	GGNCC	2 cut(s)	567, 1244
PspPPI	RGGWCCY	1 cut(s)	567
PsuI	RGATCY	3 cut(s)	228, 300, 1106
RruI	TCGCGA	1 cut(s)	1166
RseI	CAYNNNNRTG	1 cut(s)	429
SaqAI	TTAA	8 cut(s)	14, 206, 324, 365, 662, 765, 858, 867
SatI	GCNGC	1 cut(s)	1260
Sau96I	GGNCC	2 cut(s)	567, 1244
SchI	GAGTC	2 cut(s)	992, 1219
ScrFI	CCNGG	1 cut(s)	1065
SduI	GDGCHC	1 cut(s)	1129
SfaNI	GCATC	1 cut(s)	1005
SfuI	TTCGAA	2 cut(s)	276, 781
SinI	GGWCC	2 cut(s)	567, 1244
SmiMI	CAYNNNNRTG	1 cut(s)	429
SpeI	ACTAGT	1 cut(s)	836
Sse9I	AATT	4 cut(s)	174, 335, 1254, 1375
SsiI	CCGC	1 cut(s)	5
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	3 cut(s)	837, 1020, 1110
StyD4I	CCNGG	1 cut(s)	1063
StyI	CCWWGG	1 cut(s)	73
TaaI	ACNGT	4 cut(s)	399, 810, 961, 1186
TaiI	ACGT	3 cut(s)	385, 582, 906
TasI	AATT	4 cut(s)	174, 335, 1254, 1375
TfiI	GAWTC	5 cut(s)	463, 532, 778, 926, 935
Tru1I	TTAA	8 cut(s)	14, 206, 324, 365, 662, 765, 858, 867
Tru9I	TTAA	8 cut(s)	14, 206, 324, 365, 662, 765, 858, 867
TseFI	GTSAC	1 cut(s)	422
TseI	GCWGC	1 cut(s)	1259
Tsp45I	GTSAC	1 cut(s)	422
TspDTI	ATGAA	3 cut(s)	542, 674, 1253
TspGWI	ACGGA	2 cut(s)	123, 419
VpaK11BI	GGWCC	2 cut(s)	567, 1244
XapI	RAATTY	1 cut(s)	1375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1403
XmnI	GAANNNNTTC	1 cut(s)	1040
XspI	CTAG	3 cut(s)	837, 1020, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.