Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0009827

Physical Location & Seq

Genomic Coordinates Reverse (-)

8393058 .. 8394566

Gene Structure 1509 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031807

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGCTGAGCTCACCGAAAACGGCGCCGTCTCCTCCGCCACCGCAACCGCAACCTCCACCGCCGCGGCCTCCAACACCTCGAAGACGAAGAACAACCCGCTCCTCCTCGGCCGCTTCGAAATCGGGAAGCTCCTCGGCCACGGCACCTTCGCGAAGGTGTACCACGCCCGGAACATCAAGACCGACGAGGGCGTCGCCATTAAGGTCATCGACAAAGAGAAGATCCTGAAAGGCGGTTTGATCGCGCACATCAAACGCGAGATCTCCATCCTCCGCCGCGTCCGCCACCCCAATATCGTCCAGCTCTTCGAAGTAATGGCCACCAAGGCCAAGATCTACTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCAACAAGGTCGCCAAGGGCCGCCTCAAAGAGGAGGTTGCCAGAAAGTACTTCCAGCAGTTAATCTCCGCCGTCGGATTCTGCCACGCCCGCGGAGTCTACCACCGCGACTTGAAGCCCGAGAATCTACTCCTGGACGAGAACGGAGATCTCAAAGTTTCGGATTTCGGGTTGAGTGCGGTCTCCGACGAAATCCGGCAGGACGGCATGTTTCACACGTTTTGCGGGACCCCGGCTTACGTGGCGCCGGAGGTTCTTGGCCGGAAGGGGTACGACGGAGCCAAGGTGGATATTTGGTCGTGTGGGGTGGTTTTATTTGTGCTTATGGCCGGCTACTTGCCTTTCCATGACCACAACGTTATGGCTATGTATAAGAAAATTTATAAGGGAGAGTTTCGGTGTCCGAGGTGGTTCAGCTCCGAGCTTGTGAGGTTGCTGACTAAGCTCTTGGACACGAATCCCAATACTCGGATTACCATTGCGGAGGTGATGGAGAATCGGTGGTTTAAGAAGGGTTTTAAGCATATTAAGTTTTACATTGACCACGATGATAGGCTATGTAATGTTCATGAGGATGAGGAGGATGATAGTGACGCCAGCTCGGTGATGTCTGATCAGTCGTGTATGTCGGAATCCGAGGCCGAATTTGAGACCAGGAGAAAGCTTACGTCTTTGCCGAGACCGGCGAGTTTGAATGCGTTTGATATAATTTCGTTTTCGCCGGGGTTTGATTTGTCTGGTTTGTTTGAGGAACGCGGGGAGGAGGCTAGGTTTGTGTCGGGTGCTCCGGTTGATAAGATAATATCGAAATTGGAGGAGATTGCGAAAGTGGTGAGCTTTTCGGTGAGGAAGAAGGATTGCAGGGTGAGCATGGAAGGGTCTAGAGAGGGTGTGAAGGGGCCGTTGACGATTGCGGCTGAGATATTCGAGTTGACACCGTCGTTGGTGGTGCTTGAAGTGAAGAAGAAAGCAGGGGACAGAACAGAGTATGAGCAGTTTTGTAATTCGGAGTTGAGACCTGGGTTGCAGAATTTGATGATTGAGGACTCTGCTGCTGGTTCTCTTGCTTCAGGAGGTTCGGTTGTTTCAGTAGGTTCTCCATCTTCAGTTCATCATCTACCTTCGGATACTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

503

Amino Acids

55.79

Weight (kDa)

6.73

Isoelectric Point (pI)

41.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	39 - 293	1.2e-76	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	40 - 289	2.1e-38	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	134 - 281	2.5e-06	Kinase-like
NAF	PF03822	352 - 408	2.3e-23	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009827)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29230 AT2G34180 AT4G18700 AT5G45810
fragaria_vesca	FvH4_3g07620 FvH4_3g07620
malus_domestica	MD05G1298800.v1.1 MD10G1278300.v1.1
prunus_persica	Prupe.4G063100_v2.0.a1
pyrus_communis	pycom10g23220
rosa_chinensis	RchiOBHm_Chr5g0011071
rosa_laevigata	RLG00000031807
rosa_multiflora	Rmu_co8374009.1_g000001 Rmu_sc0003242.1_g000008
rosa_roxburghii	Rroxscaffold_1G00065340
rosa_rugosa	Rorug04G0455000
rosa_samantha	Rh5AG087200 Rh5BG082000 Rh5CG094800
rosa_wichuraiana	Rw0G000160 Rw0G017790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	756
AasI	GACNNNNNNGTC	1 cut(s)	191
AccB1I	GGYRCC	3 cut(s)	23, 143, 616
AccBSI	CCGCTC	1 cut(s)	100
AccI	GTMKAC	1 cut(s)	471
AccII	CGCG	9 cut(s)	65, 152, 245, 258, 279, 360, 465, 480, 1128
AclI	AACGTT	1 cut(s)	729
AclWI	GGATC	1 cut(s)	217
AcoI	YGGCCR	5 cut(s)	109, 136, 318, 631, 699
AcsI	RAATTY	3 cut(s)	750, 1016, 1402
AcuI	CTGAAG	2 cut(s)	1425, 1461
AcyI	GRCGYC	4 cut(s)	24, 192, 617, 966
AfaI	GTAC	4 cut(s)	161, 353, 422, 644
AfiI	CCNNNNNNNGG	2 cut(s)	403, 840
AflIII	ACRYGT	1 cut(s)	588
AgsI	TTSAA	4 cut(s)	376, 487, 1066, 1328
AjnI	CCWGG	3 cut(s)	504, 1025, 1390
AjuI	GAANNNNNNNTTGG	2 cut(s)	323, 355
Alw21I	GWGCWC	3 cut(s)	12, 372, 1159
Alw26I	GTCTC	5 cut(s)	34, 559, 1016, 1045, 1381
AlwI	GGATC	1 cut(s)	217
Ama87I	CYCGRG	1 cut(s)	491
ApeKI	GCWGC	1 cut(s)	1424
ApoI	RAATTY	3 cut(s)	750, 1016, 1402
AspLEI	GCGC	3 cut(s)	26, 247, 619
AspS9I	GGNCC	3 cut(s)	391, 600, 1271
AsuC2I	CCSGG	3 cut(s)	169, 605, 1095
AsuHPI	GGTGA	6 cut(s)	4, 871, 988, 1216, 1228, 1249
AsuII	TTCGAA	2 cut(s)	117, 309
AvaI	CYCGRG	1 cut(s)	491
AvaII	GGWCC	1 cut(s)	600
BalI	TGGCCA	1 cut(s)	320
BanI	GGYRCC	3 cut(s)	23, 143, 616
BanII	GRGCYC	2 cut(s)	12, 372
BbsI	GAAGAC	1 cut(s)	89
Bbv12I	GWGCWC	3 cut(s)	12, 372, 1159
BbvI	GCAGC	1 cut(s)	1411
BccI	CCATC	3 cut(s)	275, 856, 1480
BceAI	ACGGC	6 cut(s)	11, 37, 157, 428, 592, 1258
BciT130I	CCWGG	3 cut(s)	506, 1027, 1392
BciVI	GTATCC	1 cut(s)	1492
BclI	TGATCA	1 cut(s)	985
BcnI	CCSGG	3 cut(s)	169, 605, 1095
BcoDI	GTCTC	5 cut(s)	34, 559, 1016, 1045, 1381
BfaI	CTAG	2 cut(s)	1140, 1254
BfoI	RGCGCY	2 cut(s)	27, 620
BfuI	GTATCC	1 cut(s)	1492
BglI	GCCNNNNNGGC	1 cut(s)	326
BglII	AGATCT	3 cut(s)	261, 333, 520
BisI	GCNGC	9 cut(s)	63, 66, 112, 277, 361, 364, 394, 1287, 1425
BlpI	GCTNAGC	1 cut(s)	6
BlsI	GCNGC	9 cut(s)	64, 67, 113, 278, 362, 365, 395, 1288, 1426
BmcAI	AGTACT	1 cut(s)	422
Bme1390I	CCNGG	6 cut(s)	169, 506, 605, 1027, 1095, 1392
Bme18I	GGWCC	1 cut(s)	600
BmeT110I	CYCGRG	1 cut(s)	491
BmgT120I	GGNCC	3 cut(s)	391, 600, 1271
BmiI	GGNNCC	7 cut(s)	25, 145, 601, 602, 618, 652, 1272
BmrFI	CCNGG	6 cut(s)	169, 506, 605, 1027, 1095, 1392
BpiI	GAAGAC	1 cut(s)	89
Bpu1102I	GCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	2 cut(s)	117, 309
BpuMI	CCSGG	3 cut(s)	169, 605, 1095
BsaAI	YACGTR	1 cut(s)	613
BsaBI	GATNNNNATC	1 cut(s)	266
BsaHI	GRCGYC	4 cut(s)	24, 192, 617, 966
BsaI	GGTCTC	4 cut(s)	559, 1016, 1045, 1381
BsaWI	WCCGGW	1 cut(s)	1159
BsaXI	ACNNNNNCTCC	8 cut(s)	642, 672, 857, 887, 1127, 1157, 1437, 1467
Bsc4I	CCNNNNNNNGG	2 cut(s)	403, 840
Bse118I	RCCGGY	2 cut(s)	701, 1054
Bse3DI	GCAATG	1 cut(s)	849
Bse8I	GATNNNNATC	1 cut(s)	266
BseBI	CCWGG	3 cut(s)	506, 1027, 1392
BseGI	GGATG	3 cut(s)	267, 952, 961
BseJI	GATNNNNATC	1 cut(s)	266
BseLI	CCNNNNNNNGG	2 cut(s)	403, 840
BseMI	GCAATG	1 cut(s)	849
BseMII	CTCAG	1 cut(s)	1281
BseRI	GAGGAG	8 cut(s)	22, 92, 95, 122, 419, 965, 1148, 1202
BseX3I	CGGCCG	1 cut(s)	109
BseXI	GCAGC	1 cut(s)	1411
Bsh1236I	CGCG	9 cut(s)	65, 152, 245, 258, 279, 360, 465, 480, 1128
Bsh1285I	CGRYCG	1 cut(s)	112
BshNI	GGYRCC	3 cut(s)	23, 143, 616
BsiEI	CGRYCG	1 cut(s)	112
BsiHKAI	GWGCWC	3 cut(s)	12, 372, 1159
BsiHKCI	CYCGRG	1 cut(s)	491
BsiSI	CCGG	9 cut(s)	169, 568, 605, 620, 634, 702, 1055, 1094, 1160
BslFI	GGGAC	2 cut(s)	613, 1361
BslI	CCNNNNNNNGG	2 cut(s)	403, 840
BsmAI	GTCTC	5 cut(s)	34, 559, 1016, 1045, 1381
BsmBI	CGTCTC	1 cut(s)	34
BsmFI	GGGAC	2 cut(s)	613, 1361
BsmI	GAATGC	1 cut(s)	1072
Bso31I	GGTCTC	4 cut(s)	559, 1016, 1045, 1381
BsoBI	CYCGRG	1 cut(s)	491
Bsp119I	TTCGAA	2 cut(s)	117, 309
Bsp1286I	GDGCHC	3 cut(s)	12, 372, 1159
Bsp143I	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
Bsp1720I	GCTNAGC	1 cut(s)	6
Bsp68I	TCGCGA	1 cut(s)	152
BspCNI	CTCAG	1 cut(s)	1282
BspFNI	CGCG	9 cut(s)	65, 152, 245, 258, 279, 360, 465, 480, 1128
BspHI	TCATGA	1 cut(s)	940
BspLI	GGNNCC	7 cut(s)	25, 145, 601, 602, 618, 652, 1272
BspPI	GGATC	1 cut(s)	217
BspQI	GCTCTTC	2 cut(s)	311, 377
BspT104I	TTCGAA	2 cut(s)	117, 309
BspT107I	GGYRCC	3 cut(s)	23, 143, 616
BspTNI	GGTCTC	4 cut(s)	559, 1016, 1045, 1381
BsrBI	CCGCTC	1 cut(s)	100
BsrDI	GCAATG	1 cut(s)	849
BsrFI	RCCGGY	2 cut(s)	701, 1054
BssAI	RCCGGY	2 cut(s)	701, 1054
BssMI	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
BssNI	GRCGYC	4 cut(s)	24, 192, 617, 966
BssT1I	CCWWGG	3 cut(s)	324, 387, 654
Bst2UI	CCWGG	3 cut(s)	506, 1027, 1392
Bst4CI	ACNGT	1 cut(s)	1311
Bst6I	CTCTTC	2 cut(s)	311, 377
BstACI	GRCGYC	4 cut(s)	24, 192, 617, 966
BstBAI	YACGTR	1 cut(s)	613
BstBI	TTCGAA	2 cut(s)	117, 309
BstC8I	GCNNGC	4 cut(s)	368, 463, 703, 970
BstDEI	CTNAG	3 cut(s)	6, 813, 1290
BstDSI	CCRYGG	4 cut(s)	63, 139, 358, 463
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	3 cut(s)	267, 952, 961
BstFNI	CGCG	9 cut(s)	65, 152, 245, 258, 279, 360, 465, 480, 1128
BstH2I	RGCGCY	2 cut(s)	27, 620
BstHHI	GCGC	3 cut(s)	26, 247, 619
BstKTI	GATC	6 cut(s)	225, 243, 264, 336, 523, 988
BstMAI	GTCTC	5 cut(s)	34, 559, 1016, 1045, 1381
BstMBI	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
BstMCI	CGRYCG	1 cut(s)	112
BstMWI	GCNNNNNNNGC	6 cut(s)	282, 326, 462, 614, 814, 1239
BstNI	CCWGG	3 cut(s)	506, 1027, 1392
BstNSI	RCATGY	1 cut(s)	583
BstSCI	CCNGG	6 cut(s)	167, 504, 603, 1025, 1093, 1390
BstUI	CGCG	9 cut(s)	65, 152, 245, 258, 279, 360, 465, 480, 1128
BstV1I	GCAGC	1 cut(s)	1411
BstV2I	GAAGAC	1 cut(s)	89
BstX2I	RGATCY	4 cut(s)	222, 261, 333, 520
BstYI	RGATCY	4 cut(s)	222, 261, 333, 520
BstZI	CGGCCG	1 cut(s)	109
BsuI	GTATCC	1 cut(s)	1492
BtgI	CCRYGG	4 cut(s)	63, 139, 358, 463
BtsCI	GGATG	3 cut(s)	267, 952, 961
BtuMI	TCGCGA	1 cut(s)	152
Cac8I	GCNNGC	4 cut(s)	368, 463, 703, 970
CciI	TCATGA	1 cut(s)	940
CfoI	GCGC	3 cut(s)	26, 247, 619
Cfr10I	RCCGGY	2 cut(s)	701, 1054
Cfr13I	GGNCC	3 cut(s)	391, 600, 1271
Cfr42I	CCGCGG	3 cut(s)	66, 361, 466
CseI	GACGC	3 cut(s)	181, 268, 974
Csp6I	GTAC	4 cut(s)	160, 352, 421, 643
CviAII	CATG	5 cut(s)	346, 580, 719, 941, 1243
CviQI	GTAC	4 cut(s)	160, 352, 421, 643
DdeI	CTNAG	3 cut(s)	6, 813, 1290
DinI	GGCGCC	2 cut(s)	25, 618
DpnI	GATC	6 cut(s)	224, 242, 263, 335, 522, 987
DpnII	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
DrdI	GACNNNNNNGTC	1 cut(s)	191
DseDI	GACNNNNNNGTC	1 cut(s)	191
EaeI	YGGCCR	5 cut(s)	109, 136, 318, 631, 699
EagI	CGGCCG	1 cut(s)	109
Eam1104I	CTCTTC	2 cut(s)	311, 377
EarI	CTCTTC	2 cut(s)	311, 377
EciI	GGCGGA	4 cut(s)	25, 263, 272, 430
Ecl136II	GAGCTC	2 cut(s)	10, 370
EclXI	CGGCCG	1 cut(s)	109
Eco130I	CCWWGG	3 cut(s)	324, 387, 654
Eco24I	GRGCYC	2 cut(s)	12, 372
Eco31I	GGTCTC	4 cut(s)	559, 1016, 1045, 1381
Eco47I	GGWCC	1 cut(s)	600
Eco52I	CGGCCG	1 cut(s)	109
Eco53kI	GAGCTC	2 cut(s)	10, 370
Eco57I	CTGAAG	2 cut(s)	1425, 1461
Eco88I	CYCGRG	1 cut(s)	491
EcoICRI	GAGCTC	2 cut(s)	10, 370
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoO109I	RGGNCCY	1 cut(s)	600
EcoRII	CCWGG	3 cut(s)	504, 1025, 1390
EcoT14I	CCWWGG	3 cut(s)	324, 387, 654
EcoT38I	GRGCYC	2 cut(s)	12, 372
EgeI	GGCGCC	2 cut(s)	25, 618
EheI	GGCGCC	2 cut(s)	25, 618
ErhI	CCWWGG	3 cut(s)	324, 387, 654
Esp3I	CGTCTC	1 cut(s)	34
FaeI	CATG	5 cut(s)	349, 583, 722, 944, 1246
FalI	AAGNNNNNCTT	2 cut(s)	323, 355
FaqI	GGGAC	2 cut(s)	613, 1361
FatI	CATG	5 cut(s)	345, 579, 718, 940, 1242
FauI	CCCGC	4 cut(s)	105, 470, 590, 1121
FbaI	TGATCA	1 cut(s)	985
FblI	GTMKAC	1 cut(s)	471
Fnu4HI	GCNGC	9 cut(s)	63, 66, 112, 277, 361, 364, 394, 1287, 1425
FokI	GGATG	3 cut(s)	254, 959, 968
FriOI	GRGCYC	2 cut(s)	12, 372
Fsp4HI	GCNGC	9 cut(s)	63, 66, 112, 277, 361, 364, 394, 1287, 1425
FspBI	CTAG	2 cut(s)	1140, 1254
GlaI	GCGC	3 cut(s)	25, 246, 618
GluI	GCNGC	9 cut(s)	63, 66, 112, 277, 361, 364, 394, 1287, 1425
HaeII	RGCGCY	2 cut(s)	27, 620
HapII	CCGG	9 cut(s)	169, 568, 605, 620, 634, 702, 1055, 1094, 1160
HgaI	GACGC	3 cut(s)	181, 268, 974
HhaI	GCGC	3 cut(s)	26, 247, 619
Hin1I	GRCGYC	4 cut(s)	24, 192, 617, 966
Hin1II	CATG	5 cut(s)	349, 583, 722, 944, 1246
Hin6I	GCGC	3 cut(s)	24, 245, 617
HinP1I	GCGC	3 cut(s)	24, 245, 617
HincII	GTYRAC	2 cut(s)	1278, 1305
HindII	GTYRAC	2 cut(s)	1278, 1305
HindIII	AAGCTT	1 cut(s)	1034
HinfI	GANTC	7 cut(s)	450, 468, 496, 829, 868, 1004, 1418
HpaII	CCGG	9 cut(s)	169, 568, 605, 620, 634, 702, 1055, 1094, 1160
HphI	GGTGA	6 cut(s)	4, 871, 988, 1216, 1228, 1249
Hpy166II	GTNNAC	4 cut(s)	160, 472, 1278, 1305
Hpy188III	TCNNGA	7 cut(s)	124, 151, 178, 226, 941, 1254, 1443
Hpy8I	GTNNAC	4 cut(s)	160, 472, 1278, 1305
Hpy99I	CGWCG	6 cut(s)	188, 197, 449, 563, 650, 1315
HpyAV	CCTTC	8 cut(s)	148, 157, 631, 877, 1219, 1241, 1261, 1503
HpyCH4III	ACNGT	1 cut(s)	1311
HpyCH4IV	ACGT	5 cut(s)	354, 590, 612, 729, 1040
HpyCH4V	TGCA	2 cut(s)	1233, 1399
HpyF10VI	GCNNNNNNNGC	6 cut(s)	282, 326, 462, 614, 814, 1239
HpyF3I	CTNAG	3 cut(s)	6, 813, 1290
HpySE526I	ACGT	5 cut(s)	354, 590, 612, 729, 1040
Hsp92I	GRCGYC	4 cut(s)	24, 192, 617, 966
Hsp92II	CATG	5 cut(s)	349, 583, 722, 944, 1246
HspAI	GCGC	3 cut(s)	24, 245, 617
KasI	GGCGCC	2 cut(s)	23, 616
KflI	GGGWCCC	1 cut(s)	600
KroI	GCCGGC	1 cut(s)	701
KroNI	GCCGGC	1 cut(s)	703
Ksp22I	TGATCA	1 cut(s)	985
KspI	CCGCGG	3 cut(s)	66, 361, 466
Kzo9I	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
LguI	GCTCTTC	2 cut(s)	311, 377
LmnI	GCTCC	5 cut(s)	105, 135, 650, 794, 1162
Lsp1109I	GCAGC	1 cut(s)	1411
MaeI	CTAG	2 cut(s)	1140, 1254
MaeII	ACGT	5 cut(s)	354, 590, 612, 729, 1040
MaeIII	GTNAC	1 cut(s)	962
MalI	GATC	6 cut(s)	224, 242, 263, 335, 522, 987
MbiI	CCGCTC	1 cut(s)	100
MboI	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
MboII	GAAGA	9 cut(s)	94, 100, 232, 298, 364, 1234, 1345, 1348, 1467
MflI	RGATCY	4 cut(s)	222, 261, 333, 520
MhlI	GDGCHC	3 cut(s)	12, 372, 1159
MlsI	TGGCCA	1 cut(s)	320
MluCI	AATT	6 cut(s)	750, 1016, 1080, 1181, 1375, 1402
MluNI	TGGCCA	1 cut(s)	320
Mly113I	GGCGCC	2 cut(s)	24, 617
MlyI	GAGTC	2 cut(s)	477, 1412
MmeI	TCCRAC	4 cut(s)	96, 427, 582, 981
Mox20I	TGGCCA	1 cut(s)	320
MroNI	GCCGGC	1 cut(s)	701
MscI	TGGCCA	1 cut(s)	320
MseI	TTAA	5 cut(s)	201, 434, 879, 891, 900
MslI	CAYNNNNRTG	1 cut(s)	945
Msp20I	TGGCCA	1 cut(s)	320
MspA1I	CMGCKG	3 cut(s)	65, 360, 465
MspI	CCGG	9 cut(s)	169, 568, 605, 620, 634, 702, 1055, 1094, 1160
MspR9I	CCNGG	6 cut(s)	169, 506, 605, 1027, 1095, 1392
Mva1269I	GAATGC	1 cut(s)	1072
MvaI	CCWGG	3 cut(s)	506, 1027, 1392
MvnI	CGCG	9 cut(s)	65, 152, 245, 258, 279, 360, 465, 480, 1128
MwoI	GCNNNNNNNGC	6 cut(s)	282, 326, 462, 614, 814, 1239
NaeI	GCCGGC	1 cut(s)	703
NarI	GGCGCC	2 cut(s)	24, 617
NciI	CCSGG	3 cut(s)	169, 605, 1095
NdeII	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
NgoMIV	GCCGGC	1 cut(s)	701
NlaIII	CATG	5 cut(s)	349, 583, 722, 944, 1246
NlaIV	GGNNCC	7 cut(s)	25, 145, 601, 602, 618, 652, 1272
NmeAIII	GCCGAG	3 cut(s)	87, 114, 1074
NmuCI	GTSAC	1 cut(s)	962
NruI	TCGCGA	1 cut(s)	152
NspI	RCATGY	1 cut(s)	583
NspV	TTCGAA	2 cut(s)	117, 309
PagI	TCATGA	1 cut(s)	940
PciSI	GCTCTTC	2 cut(s)	311, 377
PcsI	WCGNNNNNNNCGW	2 cut(s)	114, 1046
PctI	GAATGC	1 cut(s)	1072
PdiI	GCCGGC	1 cut(s)	703
PfeI	GAWTC	5 cut(s)	450, 496, 829, 868, 1004
PflFI	GACNNNGTC	1 cut(s)	1309
PfoI	TCCNGGA	1 cut(s)	504
PkrI	GCNGC	9 cut(s)	64, 67, 113, 278, 362, 365, 395, 1288, 1426
PleI	GAGTC	2 cut(s)	476, 1412
PluTI	GGCGCC	2 cut(s)	27, 620
PpsI	GAGTC	2 cut(s)	476, 1412
Ppu21I	YACGTR	1 cut(s)	613
PpuMI	RGGWCCY	1 cut(s)	600
PsiI	TTATAA	1 cut(s)	756
Psp124BI	GAGCTC	2 cut(s)	12, 372
Psp1406I	AACGTT	1 cut(s)	729
Psp5II	RGGWCCY	1 cut(s)	600
Psp6I	CCWGG	3 cut(s)	504, 1025, 1390
PspGI	CCWGG	3 cut(s)	504, 1025, 1390
PspN4I	GGNNCC	7 cut(s)	25, 145, 601, 602, 618, 652, 1272
PspPI	GGNCC	3 cut(s)	391, 600, 1271
PspPPI	RGGWCCY	1 cut(s)	600
PsuI	RGATCY	4 cut(s)	222, 261, 333, 520
PsyI	GACNNNGTC	1 cut(s)	1309
RruI	TCGCGA	1 cut(s)	152
RsaI	GTAC	4 cut(s)	161, 353, 422, 644
RsaNI	GTAC	4 cut(s)	160, 352, 421, 643
RseI	CAYNNNNRTG	1 cut(s)	945
SacI	GAGCTC	2 cut(s)	12, 372
SacII	CCGCGG	3 cut(s)	66, 361, 466
SapI	GCTCTTC	2 cut(s)	311, 377
SaqAI	TTAA	5 cut(s)	201, 434, 879, 891, 900
SatI	GCNGC	9 cut(s)	63, 66, 112, 277, 361, 364, 394, 1287, 1425
Sau3AI	GATC	6 cut(s)	222, 240, 261, 333, 520, 985
Sau96I	GGNCC	3 cut(s)	391, 600, 1271
ScaI	AGTACT	1 cut(s)	422
SchI	GAGTC	2 cut(s)	477, 1412
ScrFI	CCNGG	6 cut(s)	169, 506, 605, 1027, 1095, 1392
SduI	GDGCHC	3 cut(s)	12, 372, 1159
SfiI	GGCCNNNNNGGCC	1 cut(s)	326
SfoI	GGCGCC	2 cut(s)	25, 618
Sfr303I	CCGCGG	3 cut(s)	66, 361, 466
SfuI	TTCGAA	2 cut(s)	117, 309
SgrBI	CCGCGG	3 cut(s)	66, 361, 466
SinI	GGWCC	1 cut(s)	600
SmiMI	CAYNNNNRTG	1 cut(s)	945
Sse9I	AATT	6 cut(s)	750, 1016, 1080, 1181, 1375, 1402
SspDI	GGCGCC	2 cut(s)	23, 616
SspMI	CTAG	2 cut(s)	1140, 1254
SstI	GAGCTC	2 cut(s)	12, 372
StyD4I	CCNGG	6 cut(s)	167, 504, 603, 1025, 1093, 1390
StyI	CCWWGG	3 cut(s)	324, 387, 654
TaaI	ACNGT	1 cut(s)	1311
TaiI	ACGT	5 cut(s)	357, 593, 615, 732, 1043
TaqI	TCGA	6 cut(s)	80, 117, 210, 309, 1178, 1299
TaqII	GACCGA	1 cut(s)	197
TasI	AATT	6 cut(s)	750, 1016, 1080, 1181, 1375, 1402
TatI	WGTACW	1 cut(s)	420
TauI	GCSGC	8 cut(s)	65, 68, 114, 279, 363, 366, 396, 1289
TfiI	GAWTC	5 cut(s)	450, 496, 829, 868, 1004
Tru1I	TTAA	5 cut(s)	201, 434, 879, 891, 900
Tru9I	TTAA	5 cut(s)	201, 434, 879, 891, 900
TseFI	GTSAC	1 cut(s)	962
TseI	GCWGC	1 cut(s)	1424
Tsp45I	GTSAC	1 cut(s)	962
TspDTI	ATGAA	2 cut(s)	929, 1472
TspGWI	ACGGA	2 cut(s)	531, 663
Tth111I	GACNNNGTC	1 cut(s)	1309
VpaK11BI	GGWCC	1 cut(s)	600
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	3 cut(s)	750, 1016, 1402
XbaI	TCTAGA	1 cut(s)	1253
XceI	RCATGY	1 cut(s)	583
XmiI	GTMKAC	1 cut(s)	471
XspI	CTAG	2 cut(s)	1140, 1254
ZrmI	AGTACT	1 cut(s)	422

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.