AT1G30130

Protein of unknown function (DUF1365)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
10587471 .. 10590209
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30130.3

Sequence Viewer

Length: 936 bp
ATGGAATTGCTCTTTCTCCTCTGTTCAATCATCTACACTTCAATCACTTCCATCTTCTTCTCTCTTCTCCTCCCGTTTCGCTTCCTTCTCCACCGTCTCCTTCCTTCACGCGCCGCCGTCGATCCTAATGTCTCTTTCTACGAAGGCACAGTCTGGCACGACCGTCTCCGTCCTGTCCGCCACTCTTTCCGTTATTCCGTTCGTTACGCACTCTTTGACCTCGACAAAGCTATTAACACACCGCCGGATCATTTCTCCGCCGACGAAGCTCGCCGTGTTTCTCGTACCACCGGGCCAATATTTCTATTGACAATACCACCAAGCGTTGGATATGAACAAAACCCATTGAGTTTATACTATTGCTATGACTTGGAAGGGTCAAGTAAGCGCTTAAGTAAATGCATTGCTCAGGTTACAAATACGCCGTGGGGGGAACGAGTGACATTTGTATTTGACCCTGAATCTGACTTGGTTGCTAAATCATTACAAGTCAGTCCTTTCATGGATATGCTTGGGAATTGGAAAATCAGAGCTAATGAACCTGGAGATGATTTATCTGTCTCCATTGCATCTCAACATCCTCATTTCGGTAACTATTTCTCTGCGACATTAAAGGCGAAAAGGATACCCCTATCGCGGGTGTCTGATCCCGCTGTTTTCTTCTGGTTGATGCCTCATAAGGTTGCGATATGGATCTATTGGCATGCACTTCAACTCTGGTGGAAGAGTGTACCTTTCATTCAACACCCGAGATACTCGAACCCATCATACAGGGAGGAAGCAGCGAAACGCGATCAAGAACTTCGTTGCCCCGGGTTAGATGGGTCTGATTCTGATAAAACCAACAAATTTGATGGGTTAAAAGGAGATGGTTGTAGTAGTAGTTTTGGAGGATGTCGCTTTGCGTGGCGAGATGCGAACTGGCCTTGGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

311

Amino Acids

35.77

Weight (kDa)

8.67

Isoelectric Point (pI)

36.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1365 PF07103 47 - 81 3.1e-07 Protein of unknown function (DUF1365)
DUF1365 PF07103 94 - 251 7.8e-37 Protein of unknown function (DUF1365)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013017)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30130 AT1G30130 AT1G30130
fragaria_vesca FvH4_3g05380 FvH4_3g05380
malus_domestica MD05G1282500.v1.1
prunus_persica Prupe.4G082300_v2.0.a1
pyrus_communis pycom10g21690
rosa_chinensis RchiOBHm_Chr5g0014371
rosa_laevigata RLG00000032102
rosa_multiflora Rmu_sc0000659.1_g000041
rosa_roxburghii Rroxscaffold_1G00062220
rosa_rugosa Rorug05G0017600
rosa_samantha Rh5AG112300 Rh5BG109000 Rh5CG120800 Rh5DG108000
rosa_wichuraiana Rw5G009740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 326
AccII CGCG 3 cut(s) 111, 637, 792
AciI CCGC 6 cut(s) 114, 178, 242, 258, 637, 651
AclWI GGATC 4 cut(s) 116, 255, 641, 701
AcsI RAATTY 1 cut(s) 848
AfaI GTAC 2 cut(s) 286, 732
AfeI AGCGCT 1 cut(s) 389
AfiI CCNNNNNNNGG 4 cut(s) 326, 587, 636, 637
AflII CTTAAG 1 cut(s) 391
AgsI TTSAA 4 cut(s) 27, 42, 713, 743
AjnI CCWGG 1 cut(s) 541
AluBI AGCT 3 cut(s) 230, 269, 533
AluI AGCT 3 cut(s) 230, 269, 533
Alw26I GTCTC 4 cut(s) 101, 136, 170, 565
AlwI GGATC 4 cut(s) 116, 255, 641, 701
Ama87I CYCGRG 2 cut(s) 748, 812
Aor51HI AGCGCT 1 cut(s) 389
AoxI GGCC 2 cut(s) 293, 923
ApeKI GCWGC 1 cut(s) 782
ApoI RAATTY 1 cut(s) 848
ArsI GACNNNNNNTTYG 2 cut(s) 135, 167
AspLEI GCGC 2 cut(s) 113, 390
AspS9I GGNCC 1 cut(s) 293
AsuC2I CCSGG 3 cut(s) 292, 813, 814
AvaI CYCGRG 2 cut(s) 748, 812
BbvI GCAGC 1 cut(s) 794
BccI CCATC 5 cut(s) 59, 772, 815, 848, 863
BceAI ACGGC 3 cut(s) 101, 258, 409
BciT130I CCWGG 1 cut(s) 543
BciVI GTATCC 1 cut(s) 618
BcnI CCSGG 3 cut(s) 292, 813, 814
BcoDI GTCTC 4 cut(s) 101, 136, 170, 565
BfoI RGCGCY 1 cut(s) 391
BfrI CTTAAG 1 cut(s) 391
BfuI GTATCC 1 cut(s) 618
BisI GCNGC 2 cut(s) 114, 783
BlsI GCNGC 2 cut(s) 115, 784
Bme1390I CCNGG 4 cut(s) 292, 543, 813, 814
BmeT110I CYCGRG 2 cut(s) 748, 812
BmgT120I GGNCC 1 cut(s) 293
BmrFI CCNGG 4 cut(s) 292, 543, 813, 814
BmsI GCATC 3 cut(s) 578, 660, 904
BpmI CTGGAG 1 cut(s) 564
Bpu10I CCTNAGC 1 cut(s) 408
BpuMI CCSGG 3 cut(s) 292, 813, 814
BsaBI GATNNNNATC 1 cut(s) 692
BsaJI CCNNGG 4 cut(s) 425, 811, 812, 926
Bsc4I CCNNNNNNNGG 4 cut(s) 326, 587, 636, 637
Bse1I ACTGG 1 cut(s) 926
Bse3DI GCAATG 2 cut(s) 402, 564
Bse8I GATNNNNATC 1 cut(s) 692
BseBI CCWGG 1 cut(s) 543
BseDI CCNNGG 4 cut(s) 425, 811, 812, 926
BseGI GGATG 2 cut(s) 577, 899
BseJI GATNNNNATC 1 cut(s) 692
BseLI CCNNNNNNNGG 4 cut(s) 326, 587, 636, 637
BseMI GCAATG 2 cut(s) 402, 564
BseMII CTCAG 1 cut(s) 422
BseNI ACTGG 1 cut(s) 926
BseRI GAGGAG 2 cut(s) 8, 59
BseXI GCAGC 1 cut(s) 794
Bsh1236I CGCG 3 cut(s) 111, 637, 792
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 2 cut(s) 295, 925
BsiEI CGRYCG 1 cut(s) 163
BsiHKCI CYCGRG 2 cut(s) 748, 812
BsiSI CCGG 3 cut(s) 245, 291, 813
BslI CCNNNNNNNGG 4 cut(s) 326, 587, 636, 637
BsmAI GTCTC 4 cut(s) 101, 136, 170, 565
BsmBI CGTCTC 2 cut(s) 101, 170
BsnI GGCC 2 cut(s) 295, 925
BsoBI CYCGRG 2 cut(s) 748, 812
Bsp143I GATC 5 cut(s) 121, 247, 646, 693, 793
BspACI CCGC 6 cut(s) 114, 178, 242, 258, 637, 651
BspANI GGCC 2 cut(s) 295, 925
BspCNI CTCAG 1 cut(s) 421
BspFNI CGCG 3 cut(s) 111, 637, 792
BspHI TCATGA 1 cut(s) 932
BspPI GGATC 4 cut(s) 116, 255, 641, 701
BspTI CTTAAG 1 cut(s) 391
BsrDI GCAATG 2 cut(s) 402, 564
BsrI ACTGG 1 cut(s) 926
BssECI CCNNGG 4 cut(s) 425, 811, 812, 926
BssMI GATC 5 cut(s) 121, 247, 646, 693, 793
BssT1I CCWWGG 1 cut(s) 926
Bst2UI CCWGG 1 cut(s) 543
Bst4CI ACNGT 3 cut(s) 95, 151, 164
Bst6I CTCTTC 2 cut(s) 69, 719
BstAFI CTTAAG 1 cut(s) 391
BstC8I GCNNGC 2 cut(s) 271, 705
BstDEI CTNAG 1 cut(s) 408
BstDSI CCRYGG 1 cut(s) 425
BstF5I GGATG 2 cut(s) 577, 899
BstFNI CGCG 3 cut(s) 111, 637, 792
BstH2I RGCGCY 1 cut(s) 391
BstHHI GCGC 2 cut(s) 113, 390
BstKTI GATC 5 cut(s) 124, 250, 649, 696, 796
BstMAI GTCTC 4 cut(s) 101, 136, 170, 565
BstMBI GATC 5 cut(s) 121, 247, 646, 693, 793
BstMCI CGRYCG 1 cut(s) 163
BstMWI GCNNNNNNNGC 1 cut(s) 266
BstNI CCWGG 1 cut(s) 543
BstNSI RCATGY 1 cut(s) 707
BstSCI CCNGG 4 cut(s) 290, 541, 811, 812
BstUI CGCG 3 cut(s) 111, 637, 792
BstV1I GCAGC 1 cut(s) 794
BstX2I RGATCY 1 cut(s) 693
BstYI RGATCY 1 cut(s) 693
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 2 cut(s) 295, 925
BtgI CCRYGG 1 cut(s) 425
BtsCI GGATG 2 cut(s) 577, 899
Cac8I GCNNGC 2 cut(s) 271, 705
CciI TCATGA 1 cut(s) 932
CfoI GCGC 2 cut(s) 113, 390
Cfr13I GGNCC 1 cut(s) 293
Cfr9I CCCGGG 1 cut(s) 812
Csp6I GTAC 2 cut(s) 285, 731
CspCI CAANNNNNGTGG 2 cut(s) 701, 736
CviAII CATG 3 cut(s) 502, 704, 933
CviJI RGCY 5 cut(s) 230, 269, 295, 533, 925
CviKI_1 RGCY 5 cut(s) 230, 269, 295, 533, 925
CviQI GTAC 2 cut(s) 285, 731
DdeI CTNAG 1 cut(s) 408
DpnI GATC 5 cut(s) 123, 249, 648, 695, 795
DpnII GATC 5 cut(s) 121, 247, 646, 693, 793
Eam1104I CTCTTC 2 cut(s) 69, 719
EarI CTCTTC 2 cut(s) 69, 719
EciI GGCGGA 2 cut(s) 167, 247
Eco130I CCWWGG 1 cut(s) 926
Eco47III AGCGCT 1 cut(s) 389
Eco88I CYCGRG 2 cut(s) 748, 812
EcoRII CCWGG 1 cut(s) 541
EcoT14I CCWWGG 1 cut(s) 926
EcoT22I ATGCAT 1 cut(s) 404
ErhI CCWWGG 1 cut(s) 926
Esp3I CGTCTC 2 cut(s) 101, 170
FaeI CATG 3 cut(s) 505, 707, 936
FatI CATG 3 cut(s) 501, 703, 932
FauI CCCGC 2 cut(s) 630, 658
Fnu4HI GCNGC 2 cut(s) 114, 783
FokI GGATG 2 cut(s) 564, 906
Fsp4HI GCNGC 2 cut(s) 114, 783
GlaI GCGC 2 cut(s) 112, 389
GluI GCNGC 2 cut(s) 114, 783
GsuI CTGGAG 1 cut(s) 564
HaeII RGCGCY 1 cut(s) 391
HaeIII GGCC 2 cut(s) 295, 925
HapII CCGG 3 cut(s) 245, 291, 813
HhaI GCGC 2 cut(s) 113, 390
Hin1II CATG 3 cut(s) 505, 707, 936
Hin6I GCGC 2 cut(s) 111, 388
HinP1I GCGC 2 cut(s) 111, 388
HinfI GANTC 2 cut(s) 461, 830
HpaII CCGG 3 cut(s) 245, 291, 813
Hpy166II GTNNAC 1 cut(s) 731
Hpy188I TCNGA 5 cut(s) 466, 530, 646, 829, 835
Hpy188III TCNNGA 2 cut(s) 797, 933
Hpy8I GTNNAC 1 cut(s) 731
Hpy99I CGWCG 2 cut(s) 122, 266
HpyAV CCTTC 5 cut(s) 95, 110, 114, 137, 368
HpyCH4III ACNGT 3 cut(s) 95, 151, 164
HpyCH4V TGCA 3 cut(s) 402, 569, 707
HpyF10VI GCNNNNNNNGC 1 cut(s) 266
HpyF3I CTNAG 1 cut(s) 408
Hsp92II CATG 3 cut(s) 505, 707, 936
HspAI GCGC 2 cut(s) 111, 388
Kzo9I GATC 5 cut(s) 121, 247, 646, 693, 793
Lsp1109I GCAGC 1 cut(s) 794
LweI GCATC 3 cut(s) 578, 660, 904
MaeIII GTNAC 4 cut(s) 203, 412, 439, 590
MalI GATC 5 cut(s) 123, 249, 648, 695, 795
MboI GATC 5 cut(s) 121, 247, 646, 693, 793
MboII GAAGA 5 cut(s) 46, 49, 56, 652, 736
MflI RGATCY 1 cut(s) 693
MluCI AATT 3 cut(s) 5, 517, 848
MmeI TCCRAC 1 cut(s) 307
MnlI CCTC 7 cut(s) 29, 80, 230, 591, 684, 769, 884
Mph1103I ATGCAT 1 cut(s) 404
MseI TTAA 4 cut(s) 234, 392, 611, 860
MslI CAYNNNNRTG 1 cut(s) 506
MspA1I CMGCKG 1 cut(s) 653
MspCI CTTAAG 1 cut(s) 391
MspI CCGG 3 cut(s) 245, 291, 813
MspR9I CCNGG 4 cut(s) 292, 543, 813, 814
MvaI CCWGG 1 cut(s) 543
MvnI CGCG 3 cut(s) 111, 637, 792
MwoI GCNNNNNNNGC 1 cut(s) 266
NciI CCSGG 3 cut(s) 292, 813, 814
NdeII GATC 5 cut(s) 121, 247, 646, 693, 793
NlaIII CATG 3 cut(s) 505, 707, 936
NmuCI GTSAC 1 cut(s) 439
NsiI ATGCAT 1 cut(s) 404
NspI RCATGY 1 cut(s) 707
PaeI GCATGC 1 cut(s) 707
PagI TCATGA 1 cut(s) 932
PfeI GAWTC 2 cut(s) 461, 830
PflMI CCANNNNNTGG 1 cut(s) 326
PkrI GCNGC 2 cut(s) 115, 784
Psp6I CCWGG 1 cut(s) 541
PspGI CCWGG 1 cut(s) 541
PspPI GGNCC 1 cut(s) 293
PsrI GAACNNNNNNTAC 2 cut(s) 752, 784
PsuI RGATCY 1 cut(s) 693
RsaI GTAC 2 cut(s) 286, 732
RsaNI GTAC 2 cut(s) 285, 731
RseI CAYNNNNRTG 1 cut(s) 506
SaqAI TTAA 4 cut(s) 234, 392, 611, 860
SatI GCNGC 2 cut(s) 114, 783
Sau3AI GATC 5 cut(s) 121, 247, 646, 693, 793
Sau96I GGNCC 1 cut(s) 293
ScrFI CCNGG 4 cut(s) 292, 543, 813, 814
SetI ASST 8 cut(s) 222, 232, 271, 414, 535, 544, 684, 736
SfaNI GCATC 3 cut(s) 578, 660, 904
SmaI CCCGGG 1 cut(s) 814
SmiMI CAYNNNNRTG 1 cut(s) 506
SmlI CTYRAG 1 cut(s) 391
SmoI CTYRAG 1 cut(s) 391
SphI GCATGC 1 cut(s) 707
Sse9I AATT 3 cut(s) 5, 517, 848
SsiI CCGC 6 cut(s) 114, 178, 242, 258, 637, 651
SspI AATATT 1 cut(s) 300
StyD4I CCNGG 4 cut(s) 290, 541, 811, 812
StyI CCWWGG 1 cut(s) 926
TaaI ACNGT 3 cut(s) 95, 151, 164
TaqI TCGA 3 cut(s) 120, 222, 758
TasI AATT 3 cut(s) 5, 517, 848
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 2 cut(s) 461, 830
Tru1I TTAA 4 cut(s) 234, 392, 611, 860
Tru9I TTAA 4 cut(s) 234, 392, 611, 860
TseFI GTSAC 1 cut(s) 439
TseI GCWGC 1 cut(s) 782
Tsp45I GTSAC 1 cut(s) 439
TspDTI ATGAA 4 cut(s) 348, 490, 552, 727
TspGWI ACGGA 3 cut(s) 158, 179, 187
TspMI CCCGGG 1 cut(s) 812
Van91I CCANNNNNTGG 1 cut(s) 326
Vha464I CTTAAG 1 cut(s) 391
XapI RAATTY 1 cut(s) 848
XceI RCATGY 1 cut(s) 707
XmaI CCCGGG 1 cut(s) 812
Zsp2I ATGCAT 1 cut(s) 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.