Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016592

Physical Location & Seq

Genomic Coordinates Reverse (-)

11954278 .. 11955362

Gene Structure 1085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G32980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 573 bp

ATGAAATCAGGAACATCAATGTCGACTCCTTTTGTTGCAGGAATTGTAGCACTCCTTAAGTCTTTGCACCCTCATTGGTCTCCGGCCGCCATTAGATCTGCTATTGTTACTACAGCTTGGAGAACAGATCCATCCGGTGAACCCATTTTCGCAGACGGATCAAACCGTAAATTAGCTGATCCATTTGACTATGGAGGAGGCGTTGTCAATTCAGAGAAAGCCGCGAAACCCGGTCTTGTTTACGATATGGGAGTTAACGATTATGTTCTATATTTGTGCTCCGTTGGTTACACAGATTCATCCATTACTAGACTTGTCCGCAAGAAGACGGTTTGTGCAAACCCTAAACCTTCAGTTCTTGACCTCAAATTGCCTTCAATCACAATCCCAAACCTTGCAAAAGAAGTTATTATCACTAGAACCGTTACCAACGTTGGACCAGTAGGGTCAGTTTATAAGGCTGTCATTGAGGCTCCAATGGGTGTTAACGTTACCGTGACACCAAGCACATTAGTATTCAACGCTAAGACGAGGAAGCTCTCGTTCAAAGTCCGTGTGTTCGCCATAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0016787 GO:0017171 GO:0019538 GO:0022414 GO:0030154 GO:0030312 GO:0031012 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042742 GO:0043170 GO:0043207 GO:0044238 GO:0044421 GO:0044464 GO:0044706 GO:0045087 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051704 GO:0051707 GO:0060560 GO:0070011 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

190

Amino Acids

20.33

Weight (kDa)

9.66

Isoelectric Point (pI)

24.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	2 - 51	3.3e-12	Subtilase family
fn3_6	PF17766	121 - 187	4.5e-18	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32980
malus_domestica	MD14G1139200.v1.1
pyrus_communis	pycom14g11490
rosa_chinensis	RchiOBHm_Chr5g0002201
rosa_multiflora	Rmu_sc0001492.1_g000003
rosa_roxburghii	Rroxscaffold_3G00267180
rosa_rugosa	Rorug06G0483500
rosa_samantha	Rh5AG017200 Rh7AG088600 Rh7BG090000 Rh7BG090400 Rh7CG089200 Rh7CG089400 Rh7DG090800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	456
AccI	GTMKAC	1 cut(s)	23
AccII	CGCG	1 cut(s)	224
AciI	CCGC	3 cut(s)	87, 222, 319
AclI	AACGTT	2 cut(s)	432, 489
AclWI	GGATC	3 cut(s)	122, 166, 173
AcoI	YGGCCR	1 cut(s)	84
AcuI	CTGAAG	1 cut(s)	336
AflII	CTTAAG	1 cut(s)	56
AgsI	TTSAA	3 cut(s)	378, 520, 547
AluBI	AGCT	3 cut(s)	116, 176, 538
AluI	AGCT	3 cut(s)	116, 176, 538
Alw21I	GWGCWC	1 cut(s)	281
Alw26I	GTCTC	1 cut(s)	84
AlwI	GGATC	3 cut(s)	122, 166, 173
AoxI	GGCC	1 cut(s)	84
AspS9I	GGNCC	1 cut(s)	437
AsuC2I	CCSGG	1 cut(s)	231
AsuHPI	GGTGA	1 cut(s)	149
AvaII	GGWCC	1 cut(s)	437
BbsI	GAAGAC	1 cut(s)	332
Bbv12I	GWGCWC	1 cut(s)	281
BccI	CCATC	1 cut(s)	139
BcnI	CCSGG	1 cut(s)	231
BcoDI	GTCTC	1 cut(s)	84
BfaI	CTAG	2 cut(s)	309, 417
BfmI	CTRYAG	1 cut(s)	111
BfrI	CTTAAG	1 cut(s)	56
BglII	AGATCT	1 cut(s)	95
BisI	GCNGC	2 cut(s)	87, 222
BlsI	GCNGC	2 cut(s)	88, 223
Bme1390I	CCNGG	1 cut(s)	231
Bme18I	GGWCC	1 cut(s)	437
BmgT120I	GGNCC	1 cut(s)	437
BmiI	GGNNCC	1 cut(s)	474
BmrFI	CCNGG	1 cut(s)	231
BpiI	GAAGAC	1 cut(s)	332
BpuMI	CCSGG	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	84
BsaWI	WCCGGW	1 cut(s)	134
BsaXI	ACNNNNNCTCC	4 cut(s)	186, 189, 216, 219
Bse1I	ACTGG	1 cut(s)	440
BseGI	GGATG	2 cut(s)	131, 299
BseNI	ACTGG	1 cut(s)	440
BseRI	GAGGAG	1 cut(s)	210
BseX3I	CGGCCG	1 cut(s)	84
Bsh1236I	CGCG	1 cut(s)	224
Bsh1285I	CGRYCG	1 cut(s)	87
BshFI	GGCC	1 cut(s)	86
BsiEI	CGRYCG	1 cut(s)	87
BsiHKAI	GWGCWC	1 cut(s)	281
BsiSI	CCGG	3 cut(s)	83, 135, 231
BsmAI	GTCTC	1 cut(s)	84
BsnI	GGCC	1 cut(s)	86
Bso31I	GGTCTC	1 cut(s)	84
Bsp1286I	GDGCHC	1 cut(s)	281
Bsp143I	GATC	4 cut(s)	95, 127, 158, 178
BspACI	CCGC	3 cut(s)	87, 222, 319
BspANI	GGCC	1 cut(s)	86
BspFNI	CGCG	1 cut(s)	224
BspLI	GGNNCC	1 cut(s)	474
BspPI	GGATC	3 cut(s)	122, 166, 173
BspTI	CTTAAG	1 cut(s)	56
BspTNI	GGTCTC	1 cut(s)	84
BsrI	ACTGG	1 cut(s)	440
BssMI	GATC	4 cut(s)	95, 127, 158, 178
Bst4CI	ACNGT	4 cut(s)	167, 331, 424, 496
BstAFI	CTTAAG	1 cut(s)	56
BstDEI	CTNAG	1 cut(s)	525
BstF5I	GGATG	2 cut(s)	131, 299
BstFNI	CGCG	1 cut(s)	224
BstKTI	GATC	4 cut(s)	98, 130, 161, 181
BstMAI	GTCTC	1 cut(s)	84
BstMBI	GATC	4 cut(s)	95, 127, 158, 178
BstMCI	CGRYCG	1 cut(s)	87
BstSCI	CCNGG	1 cut(s)	229
BstSFI	CTRYAG	1 cut(s)	111
BstUI	CGCG	1 cut(s)	224
BstV2I	GAAGAC	1 cut(s)	332
BstX2I	RGATCY	2 cut(s)	95, 127
BstYI	RGATCY	2 cut(s)	95, 127
BstZI	CGGCCG	1 cut(s)	84
BsuRI	GGCC	1 cut(s)	86
BtsCI	GGATG	2 cut(s)	131, 299
Cfr13I	GGNCC	1 cut(s)	437
CviJI	RGCY	7 cut(s)	86, 116, 176, 221, 461, 473, 538
CviKI_1	RGCY	7 cut(s)	86, 116, 176, 221, 461, 473, 538
DdeI	CTNAG	1 cut(s)	525
DpnI	GATC	4 cut(s)	97, 129, 160, 180
DpnII	GATC	4 cut(s)	95, 127, 158, 178
EaeI	YGGCCR	1 cut(s)	84
EagI	CGGCCG	1 cut(s)	84
EclXI	CGGCCG	1 cut(s)	84
Eco31I	GGTCTC	1 cut(s)	84
Eco47I	GGWCC	1 cut(s)	437
Eco52I	CGGCCG	1 cut(s)	84
Eco57I	CTGAAG	1 cut(s)	336
FaiI	YATR	6 cut(s)	192, 248, 264, 271, 456, 566
FblI	GTMKAC	1 cut(s)	23
Fnu4HI	GCNGC	2 cut(s)	87, 222
FokI	GGATG	2 cut(s)	118, 286
Fsp4HI	GCNGC	2 cut(s)	87, 222
FspBI	CTAG	2 cut(s)	309, 417
GluI	GCNGC	2 cut(s)	87, 222
HaeIII	GGCC	1 cut(s)	86
HapII	CCGG	3 cut(s)	83, 135, 231
HincII	GTYRAC	3 cut(s)	24, 256, 487
HindII	GTYRAC	3 cut(s)	24, 256, 487
HinfI	GANTC	2 cut(s)	25, 296
HpaI	GTTAAC	2 cut(s)	256, 487
HpaII	CCGG	3 cut(s)	83, 135, 231
HphI	GGTGA	1 cut(s)	149
Hpy166II	GTNNAC	5 cut(s)	24, 140, 241, 256, 487
Hpy188I	TCNGA	1 cut(s)	214
Hpy188III	TCNNGA	2 cut(s)	9, 359
Hpy8I	GTNNAC	5 cut(s)	24, 140, 241, 256, 487
HpyAV	CCTTC	2 cut(s)	360, 384
HpyCH4III	ACNGT	4 cut(s)	167, 331, 424, 496
HpyCH4IV	ACGT	2 cut(s)	432, 489
HpyCH4V	TGCA	4 cut(s)	38, 67, 338, 398
HpyF3I	CTNAG	1 cut(s)	525
HpySE526I	ACGT	2 cut(s)	432, 489
KspAI	GTTAAC	2 cut(s)	256, 487
Kzo9I	GATC	4 cut(s)	95, 127, 158, 178
LmnI	GCTCC	2 cut(s)	284, 478
LpnPI	CCDG	5 cut(s)	24, 96, 148, 244, 453
MaeI	CTAG	2 cut(s)	309, 417
MaeII	ACGT	2 cut(s)	432, 489
MaeIII	GTNAC	5 cut(s)	106, 287, 424, 490, 496
MalI	GATC	4 cut(s)	97, 129, 160, 180
MboI	GATC	4 cut(s)	95, 127, 158, 178
MboII	GAAGA	1 cut(s)	337
MflI	RGATCY	2 cut(s)	95, 127
MhlI	GDGCHC	1 cut(s)	281
MluCI	AATT	4 cut(s)	42, 170, 208, 368
MlyI	GAGTC	1 cut(s)	19
MmeI	TCCRAC	1 cut(s)	415
MnlI	CCTC	6 cut(s)	81, 188, 191, 374, 463, 525
MseI	TTAA	3 cut(s)	57, 255, 486
MspCI	CTTAAG	1 cut(s)	56
MspI	CCGG	3 cut(s)	83, 135, 231
MspR9I	CCNGG	1 cut(s)	231
MvnI	CGCG	1 cut(s)	224
NciI	CCSGG	1 cut(s)	231
NdeII	GATC	4 cut(s)	95, 127, 158, 178
NlaIV	GGNNCC	1 cut(s)	474
NmuCI	GTSAC	1 cut(s)	496
PfeI	GAWTC	1 cut(s)	296
PkrI	GCNGC	2 cut(s)	88, 223
PleI	GAGTC	1 cut(s)	19
PpsI	GAGTC	1 cut(s)	19
PsiI	TTATAA	1 cut(s)	456
Psp1406I	AACGTT	2 cut(s)	432, 489
PspN4I	GGNNCC	1 cut(s)	474
PspPI	GGNCC	1 cut(s)	437
PsuI	RGATCY	2 cut(s)	95, 127
SalI	GTCGAC	1 cut(s)	22
SaqAI	TTAA	3 cut(s)	57, 255, 486
SatI	GCNGC	2 cut(s)	87, 222
Sau3AI	GATC	4 cut(s)	95, 127, 158, 178
Sau96I	GGNCC	1 cut(s)	437
SchI	GAGTC	1 cut(s)	19
ScrFI	CCNGG	1 cut(s)	231
SduI	GDGCHC	1 cut(s)	281
SetI	ASST	8 cut(s)	118, 178, 352, 366, 396, 435, 492, 540
SfcI	CTRYAG	1 cut(s)	111
SinI	GGWCC	1 cut(s)	437
SmlI	CTYRAG	1 cut(s)	56
SmoI	CTYRAG	1 cut(s)	56
Sse9I	AATT	4 cut(s)	42, 170, 208, 368
SsiI	CCGC	3 cut(s)	87, 222, 319
SspMI	CTAG	2 cut(s)	309, 417
StyD4I	CCNGG	1 cut(s)	229
TaaI	ACNGT	4 cut(s)	167, 331, 424, 496
TaiI	ACGT	2 cut(s)	435, 492
TaqI	TCGA	1 cut(s)	23
TasI	AATT	4 cut(s)	42, 170, 208, 368
TauI	GCSGC	2 cut(s)	89, 224
TfiI	GAWTC	1 cut(s)	296
Tru1I	TTAA	3 cut(s)	57, 255, 486
Tru9I	TTAA	3 cut(s)	57, 255, 486
TseFI	GTSAC	1 cut(s)	496
Tsp45I	GTSAC	1 cut(s)	496
TspDTI	ATGAA	2 cut(s)	17, 288
TspGWI	ACGGA	3 cut(s)	171, 271, 542
Vha464I	CTTAAG	1 cut(s)	56
VpaK11BI	GGWCC	1 cut(s)	437
XmiI	GTMKAC	1 cut(s)	23
XspI	CTAG	2 cut(s)	309, 417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.