AT1G47240

Natural resistance-associated macrophage protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013937
Physical Location & Seq
Reverse (-)
17308803 .. 17311505
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G47240.1

Sequence Viewer

Length: 1593 bp
ATGGAAAACGACGTCAAAGAGAATCTCGAAGAAGAGGAAGACCGTCTTCTTCCTCCTCCTCCTCCTTCACAATCTCTCCCATCCACCGATTCCGAATCCGAAGCGGCTTTCGAAACAAACGAAAAGATCCTAATCGTCGATTTCGAATCACCCGACGATCCAACAACCGGAGACACACCACCGCCATTCTCATGGCGGAAGCTCTGGTTATTCACCGGTCCAGGTTTCTTAATGAGTATAGCGTTTTTGGATCCAGGGAATCTAGAAGGAGATCTACAAGCTGGTGCAATCGCTGGCTATTCTCTGTTGTGGCTACTAATGTGGGCAACAGCTATGGGGTTGTTGATTCAGATGTTGTCAGCTAGAGTCGGTGTAGCTACTGGTCGTCATTTAGCTGAGCTTTGTCGTGATGAGTATCCTACTTGGGCTAGGTATGTGCTTTGGTCTATGGCGGAACTTGCTTTGATTGGTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTATTCAGATTCTTAGCCGTGGCTTCTTGCCTCTTTGGGCTGGTGTTGTTATTACTGCTTCCGATTGTTTTTTATTTTTGTTTCTAGAGAATTACGGTGTGAGGAAGTTAGAAGCTGTTTTTGCAGTTTTGATCGCAACTATGGGTTTGTCCTTTGCTTGGATGTTTGGTGAAACAAAACCGAGTGGGAAAGAACTTATGATAGGTATTTTACTACCGAGACTTAGCTCAAAGACAATTAGGCAAGCTGTAGGTGTTGTTGGCTGTGTTATAATGCCTCACAATGTGTTTTTGCATTCGGCTCTTGTACAATCGAGGAAAATCGATCCGAAGAGGAAATCCCGGGTTCAAGAAGCGCTTAATTACTATTTGATCGAGTCATCCGTCGCACTTTTCATCTCCTTCATGATTAACTTGTTTGTGACTACTGTCTTTGCAAAGGGGTTTTATGGAACTGAGAAAGCTAATAACATTGGCCTAGTTAATGCTGGTCAGTATCTTCAAGAAAAGTTTGGAGGCGGGCTTCTTCCGATTCTTTATATCTGGGGTATCGGGTTGTTAGCAGCCGGACAAAGCAGTACGATAACTGGTACATATGCTGGACAGTTTATAATGGGCGGTTTTCTGAATCTCCGGCTTAAGAAATGGATGAGGGCAGTAATAACAAGAAGCTGTGCTATTGTGCCTACAATGATTGTGGCAATCGTGTTCAATACTTCTGAAGCTTCCTTGGATGTTTTGAATGAATGGCTCAATGTCCTTCAGTCTGTACAAATTCCTTTTGCTCTTCTCCCTCTTCTAACCTTGGTATCCAAAGAAGAAATTATGGGAGACTTCAAGATTGGGCCTATTCTCCAGAGAATAGCTTGGACTGTGGCTGCACTTGTAATGATCATCAATGGGTATCTTCTGTTGGATTTCTTTGTATCAGAAGTCGACGGGTTTCTGTTTGGAGTTACGGTCTGCGTCTGGACGACTGCTTATATCGCCTTTATAGTGTACCTCATTTCACACAGCAACTTTTTTCCTTCTCCTTGGTCATCCTCTTCCATAGAACTTCCCAAAAGAGTGTCCGTCTCCAATAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000041 GO:0001558 GO:0003674 GO:0005215 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005802 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006828 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008324 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009624 GO:0009653 GO:0009888 GO:0009893 GO:0009987 GO:0010015 GO:0010035 GO:0010038 GO:0010039 GO:0010042 GO:0010043 GO:0010053 GO:0010054 GO:0012505 GO:0015075 GO:0015318 GO:0016020 GO:0016049 GO:0019222 GO:0021700 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0030154 GO:0030307 GO:0031090 GO:0031323 GO:0031325 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0040007 GO:0040008 GO:0042221 GO:0042592 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045927 GO:0046873 GO:0046915 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048638 GO:0048639 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071287 GO:0071421 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098791 GO:0098805 GO:0099402 GO:1905392 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko04142 ko04216 ko04978 map04142 map04216 map04978
Pfam Domains
Protein Families
Nramp

Protein Analysis

530

Amino Acids

58.42

Weight (kDa)

5.06

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nramp PF01566 89 - 450 1.5e-113 Natural resistance-associated macrophage protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013937)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47240 AT4G18790
fragaria_vesca FvH4_2g33450 FvH4_2g33450
malus_domestica MD08G1089600.v1.1 MD15G1074200.v1.1
prunus_persica Prupe.1G427000_v2.0.a1 Prupe.1G427000_v2.0.a1
pyrus_communis pycom08g07290 pycom15g06940
rosa_chinensis RchiOBHm_Chr6g0309081
rosa_laevigata RLG00000010591
rosa_roxburghii Rroxscaffold_7G00159660
rosa_rugosa Rorug06G0369600
rosa_samantha Rh6AG482300 Rh6CG496100
rosa_wichuraiana Rw6G041990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 776, 1115
AatII GACGTC 1 cut(s) 15
AccI GTMKAC 1 cut(s) 1440
AciI CCGC 6 cut(s) 104, 182, 196, 452, 1023, 1122
AclWI GGATC 5 cut(s) 121, 152, 245, 258, 824
AcsI RAATTY 1 cut(s) 1278
AcuI CTGAAG 2 cut(s) 1245, 1250
AcyI GRCGYC 1 cut(s) 12
AdeI CACNNNGTG 1 cut(s) 790
AfaI GTAC 5 cut(s) 813, 1084, 1096, 1275, 1505
AfeI AGCGCT 1 cut(s) 861
AfiI CCNNNNNNNGG 2 cut(s) 167, 663
AflII CTTAAG 1 cut(s) 1142
AgeI ACCGGT 1 cut(s) 215
AgsI TTSAA 6 cut(s) 482, 854, 1007, 1216, 1246, 1342
AjnI CCWGG 2 cut(s) 220, 253
Alw26I GTCTC 4 cut(s) 165, 718, 1329, 1585
AlwI GGATC 5 cut(s) 121, 152, 245, 258, 824
Ama87I CYCGRG 1 cut(s) 846
Aor51HI AGCGCT 1 cut(s) 861
AoxI GGCC 2 cut(s) 979, 1349
ApeKI GCWGC 2 cut(s) 1067, 1382
ApoI RAATTY 1 cut(s) 1278
AsiGI ACCGGT 1 cut(s) 215
AspLEI GCGC 1 cut(s) 862
AspS9I GGNCC 2 cut(s) 218, 1349
AsuC2I CCSGG 2 cut(s) 847, 848
AsuHPI GGTGA 3 cut(s) 141, 205, 686
AsuII TTCGAA 2 cut(s) 111, 144
AvaI CYCGRG 1 cut(s) 846
AvaII GGWCC 1 cut(s) 218
BaeI ACNNNNGTAYC 2 cut(s) 1296, 1329
BamHI GGATCC 1 cut(s) 250
BarI GAAGNNNNNNTAC 2 cut(s) 258, 290
BbsI GAAGAC 2 cut(s) 38, 45
BbvI GCAGC 2 cut(s) 1079, 1369
BccI CCATC 1 cut(s) 88
BceAI ACGGC 1 cut(s) 507
BciT130I CCWGG 2 cut(s) 222, 255
BciVI GTATCC 2 cut(s) 426, 1324
BclI TGATCA 1 cut(s) 1395
BcnI CCSGG 2 cut(s) 847, 848
BcoDI GTCTC 4 cut(s) 165, 718, 1329, 1585
BfaI CTAG 6 cut(s) 263, 363, 429, 590, 983, 1591
BfmI CTRYAG 1 cut(s) 753
BfoI RGCGCY 1 cut(s) 863
BfrI CTTAAG 1 cut(s) 1142
BfuI GTATCC 2 cut(s) 426, 1324
BglII AGATCT 1 cut(s) 271
BisI GCNGC 3 cut(s) 105, 1068, 1383
BlpI GCTNAGC 1 cut(s) 396
BlsI GCNGC 3 cut(s) 106, 1069, 1384
Bme1390I CCNGG 4 cut(s) 222, 255, 847, 848
Bme18I GGWCC 1 cut(s) 218
BmeT110I CYCGRG 1 cut(s) 846
BmgT120I GGNCC 2 cut(s) 218, 1349
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 4 cut(s) 222, 255, 847, 848
BoxI GACNNNNGTC 1 cut(s) 932
BpiI GAAGAC 2 cut(s) 38, 45
BpmI CTGGAG 1 cut(s) 1343
Bpu1102I GCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 2 cut(s) 111, 144
BpuMI CCSGG 2 cut(s) 847, 848
Bsa29I ATCGAT 1 cut(s) 828
BsaBI GATNNNNATC 2 cut(s) 131, 414
BsaHI GRCGYC 1 cut(s) 12
BsaJI CCNNGG 6 cut(s) 254, 523, 846, 1233, 1308, 1538
BsaWI WCCGGW 2 cut(s) 167, 215
BsaXI ACNNNNNCTCC 4 cut(s) 60, 90, 1449, 1479
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 663
Bse118I RCCGGY 1 cut(s) 215
Bse1I ACTGG 2 cut(s) 385, 1096
Bse8I GATNNNNATC 2 cut(s) 131, 414
BseBI CCWGG 2 cut(s) 222, 255
BseCI ATCGAT 1 cut(s) 828
BseDI CCNNGG 6 cut(s) 254, 523, 846, 1233, 1308, 1538
BseGI GGATG 6 cut(s) 80, 672, 884, 1158, 1243, 1544
BseJI GATNNNNATC 2 cut(s) 131, 414
BseLI CCNNNNNNNGG 2 cut(s) 167, 663
BseMII CTCAG 2 cut(s) 387, 951
BseNI ACTGG 2 cut(s) 385, 1096
BseRI GAGGAG 3 cut(s) 45, 48, 51
BseXI GCAGC 2 cut(s) 1079, 1369
BsgI GTGCAG 1 cut(s) 1368
BshFI GGCC 2 cut(s) 981, 1351
BshTI ACCGGT 1 cut(s) 215
BshVI ATCGAT 1 cut(s) 828
BsiHKCI CYCGRG 1 cut(s) 846
BsiSI CCGG 5 cut(s) 168, 216, 847, 1071, 1138
BslI CCNNNNNNNGG 2 cut(s) 167, 663
BsmAI GTCTC 4 cut(s) 165, 718, 1329, 1585
BsmBI CGTCTC 1 cut(s) 1585
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 2 cut(s) 981, 1351
BsoBI CYCGRG 1 cut(s) 846
Bsp119I TTCGAA 2 cut(s) 111, 144
Bsp1407I TGTACA 2 cut(s) 811, 1273
Bsp143I GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
Bsp1720I GCTNAGC 1 cut(s) 396
BspACI CCGC 6 cut(s) 104, 182, 196, 452, 1023, 1122
BspANI GGCC 2 cut(s) 981, 1351
BspCNI CTCAG 2 cut(s) 388, 952
BspDI ATCGAT 1 cut(s) 828
BspHI TCATGA 1 cut(s) 909
BspLI GGNNCC 1 cut(s) 252
BspPI GGATC 5 cut(s) 121, 152, 245, 258, 824
BspQI GCTCTTC 1 cut(s) 1296
BspT104I TTCGAA 2 cut(s) 111, 144
BspTI CTTAAG 1 cut(s) 1142
BsrFI RCCGGY 1 cut(s) 215
BsrGI TGTACA 2 cut(s) 811, 1273
BsrI ACTGG 2 cut(s) 385, 1096
BssAI RCCGGY 1 cut(s) 215
BssECI CCNNGG 6 cut(s) 254, 523, 846, 1233, 1308, 1538
BssMI GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
BssNI GRCGYC 1 cut(s) 12
BssT1I CCWWGG 3 cut(s) 1233, 1308, 1538
Bst2UI CCWGG 2 cut(s) 222, 255
Bst4CI ACNGT 6 cut(s) 44, 602, 934, 1110, 1378, 1465
Bst6I CTCTTC 5 cut(s) 27, 830, 1296, 1305, 1555
BstACI GRCGYC 1 cut(s) 12
BstAFI CTTAAG 1 cut(s) 1142
BstAUI TGTACA 2 cut(s) 811, 1273
BstBI TTCGAA 2 cut(s) 111, 144
BstC8I GCNNGC 3 cut(s) 295, 750, 1025
BstDEI CTNAG 4 cut(s) 396, 518, 728, 960
BstDSI CCRYGG 1 cut(s) 523
BstF5I GGATG 6 cut(s) 80, 672, 884, 1158, 1243, 1544
BstH2I RGCGCY 1 cut(s) 863
BstHHI GCGC 1 cut(s) 862
BstKTI GATC 8 cut(s) 129, 160, 253, 274, 639, 832, 879, 1398
BstMAI GTCTC 4 cut(s) 165, 718, 1329, 1585
BstMBI GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
BstMWI GCNNNNNNNGC 3 cut(s) 458, 626, 1490
BstNI CCWGG 2 cut(s) 222, 255
BstPAI GACNNNNGTC 1 cut(s) 932
BstSCI CCNGG 4 cut(s) 220, 253, 845, 846
BstSFI CTRYAG 1 cut(s) 753
BstV1I GCAGC 2 cut(s) 1079, 1369
BstV2I GAAGAC 2 cut(s) 38, 45
BstX2I RGATCY 3 cut(s) 126, 250, 271
BstXI CCANNNNNNTGG 1 cut(s) 192
BstYI RGATCY 3 cut(s) 126, 250, 271
Bsu15I ATCGAT 1 cut(s) 828
BsuI GTATCC 2 cut(s) 426, 1324
BsuRI GGCC 2 cut(s) 981, 1351
BsuTUI ATCGAT 1 cut(s) 828
BtgI CCRYGG 1 cut(s) 523
BtsCI GGATG 6 cut(s) 80, 672, 884, 1158, 1243, 1544
Cac8I GCNNGC 3 cut(s) 295, 750, 1025
CciI TCATGA 1 cut(s) 909
CfoI GCGC 1 cut(s) 862
Cfr10I RCCGGY 1 cut(s) 215
Cfr13I GGNCC 2 cut(s) 218, 1349
Cfr9I CCCGGG 1 cut(s) 846
ClaI ATCGAT 1 cut(s) 828
CseI GACGC 1 cut(s) 1459
Csp6I GTAC 5 cut(s) 812, 1083, 1095, 1274, 1504
CspAI ACCGGT 1 cut(s) 215
CspCI CAANNNNNGTGG 2 cut(s) 1182, 1217
CviAII CATG 2 cut(s) 192, 910
CviQI GTAC 5 cut(s) 812, 1083, 1095, 1274, 1504
DdeI CTNAG 4 cut(s) 396, 518, 728, 960
DpnI GATC 8 cut(s) 128, 159, 252, 273, 638, 831, 878, 1397
DpnII GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
DraIII CACNNNGTG 1 cut(s) 790
Eam1104I CTCTTC 5 cut(s) 27, 830, 1296, 1305, 1555
EarI CTCTTC 5 cut(s) 27, 830, 1296, 1305, 1555
EciI GGCGGA 2 cut(s) 211, 467
Eco130I CCWWGG 3 cut(s) 1233, 1308, 1538
Eco47I GGWCC 1 cut(s) 218
Eco47III AGCGCT 1 cut(s) 861
Eco57I CTGAAG 2 cut(s) 1245, 1250
Eco88I CYCGRG 1 cut(s) 846
EcoRII CCWGG 2 cut(s) 220, 253
EcoT14I CCWWGG 3 cut(s) 1233, 1308, 1538
ErhI CCWWGG 3 cut(s) 1233, 1308, 1538
Esp3I CGTCTC 1 cut(s) 1585
FaeI CATG 2 cut(s) 195, 913
FalI AAGNNNNNCTT 4 cut(s) 30, 62, 846, 878
FatI CATG 2 cut(s) 191, 909
FauI CCCGC 1 cut(s) 1016
FauNDI CATATG 1 cut(s) 1099
FbaI TGATCA 1 cut(s) 1395
FblI GTMKAC 1 cut(s) 1440
Fnu4HI GCNGC 3 cut(s) 105, 1068, 1383
FokI GGATG 6 cut(s) 67, 679, 871, 1165, 1250, 1531
Fsp4HI GCNGC 3 cut(s) 105, 1068, 1383
FspBI CTAG 6 cut(s) 263, 363, 429, 590, 983, 1591
GlaI GCGC 1 cut(s) 861
GluI GCNGC 3 cut(s) 105, 1068, 1383
GsuI CTGGAG 1 cut(s) 1343
HaeII RGCGCY 1 cut(s) 863
HaeIII GGCC 2 cut(s) 981, 1351
HapII CCGG 5 cut(s) 168, 216, 847, 1071, 1138
HgaI GACGC 1 cut(s) 1459
HhaI GCGC 1 cut(s) 862
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 2 cut(s) 195, 913
Hin6I GCGC 1 cut(s) 860
HinP1I GCGC 1 cut(s) 860
HincII GTYRAC 1 cut(s) 1441
HindII GTYRAC 1 cut(s) 1441
HindIII AAGCTT 1 cut(s) 1227
HpaII CCGG 5 cut(s) 168, 216, 847, 1071, 1138
HphI GGTGA 3 cut(s) 141, 205, 686
Hpy166II GTNNAC 2 cut(s) 1441, 1504
Hpy8I GTNNAC 2 cut(s) 1441, 1504
Hpy99I CGWCG 5 cut(s) 14, 140, 158, 893, 1445
HpyAV CCTTC 5 cut(s) 75, 260, 916, 1274, 1542
HpyCH4III ACNGT 6 cut(s) 44, 602, 934, 1110, 1378, 1465
HpyCH4IV ACGT 1 cut(s) 12
HpyCH4V TGCA 5 cut(s) 287, 629, 799, 941, 1385
HpyF10VI GCNNNNNNNGC 3 cut(s) 458, 626, 1490
HpyF3I CTNAG 4 cut(s) 396, 518, 728, 960
HpySE526I ACGT 1 cut(s) 12
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 2 cut(s) 195, 913
HspAI GCGC 1 cut(s) 860
Ksp22I TGATCA 1 cut(s) 1395
Kzo9I GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
LguI GCTCTTC 1 cut(s) 1296
Lsp1109I GCAGC 2 cut(s) 1079, 1369
MaeI CTAG 6 cut(s) 263, 363, 429, 590, 983, 1591
MaeII ACGT 1 cut(s) 12
MaeIII GTNAC 2 cut(s) 925, 1459
MalI GATC 8 cut(s) 128, 159, 252, 273, 638, 831, 878, 1397
MboI GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
MflI RGATCY 3 cut(s) 126, 250, 271
MluCI AATT 5 cut(s) 595, 741, 865, 1278, 1326
MlyI GAGTC 2 cut(s) 375, 890
MmeI TCCRAC 2 cut(s) 185, 1398
MseI TTAA 5 cut(s) 230, 864, 915, 987, 1143
MslI CAYNNNNRTG 1 cut(s) 190
MspCI CTTAAG 1 cut(s) 1142
MspI CCGG 5 cut(s) 168, 216, 847, 1071, 1138
MspR9I CCNGG 4 cut(s) 222, 255, 847, 848
Mva1269I GAATGC 1 cut(s) 799
MvaI CCWGG 2 cut(s) 222, 255
MwoI GCNNNNNNNGC 3 cut(s) 458, 626, 1490
NciI CCSGG 2 cut(s) 847, 848
NdeI CATATG 1 cut(s) 1099
NdeII GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
NlaIII CATG 2 cut(s) 195, 913
NlaIV GGNNCC 1 cut(s) 252
NmuCI GTSAC 1 cut(s) 925
NspV TTCGAA 2 cut(s) 111, 144
PagI TCATGA 1 cut(s) 909
PciSI GCTCTTC 1 cut(s) 1296
PcsI WCGNNNNNNNCGW 4 cut(s) 117, 141, 150, 885
PctI GAATGC 1 cut(s) 799
PfeI GAWTC 9 cut(s) 22, 89, 95, 146, 259, 346, 514, 1036, 1132
PinAI ACCGGT 1 cut(s) 215
PkrI GCNGC 3 cut(s) 106, 1069, 1384
PleI GAGTC 2 cut(s) 374, 889
PpsI GAGTC 2 cut(s) 374, 889
PshAI GACNNNNGTC 1 cut(s) 932
PsiI TTATAA 2 cut(s) 776, 1115
Psp6I CCWGG 2 cut(s) 220, 253
PspGI CCWGG 2 cut(s) 220, 253
PspN4I GGNNCC 1 cut(s) 252
PspPI GGNCC 2 cut(s) 218, 1349
PsuI RGATCY 3 cut(s) 126, 250, 271
RsaI GTAC 5 cut(s) 813, 1084, 1096, 1275, 1505
RsaNI GTAC 5 cut(s) 812, 1083, 1095, 1274, 1504
RseI CAYNNNNRTG 1 cut(s) 190
SalI GTCGAC 1 cut(s) 1439
SapI GCTCTTC 1 cut(s) 1296
SaqAI TTAA 5 cut(s) 230, 864, 915, 987, 1143
SatI GCNGC 3 cut(s) 105, 1068, 1383
Sau3AI GATC 8 cut(s) 126, 157, 250, 271, 636, 829, 876, 1395
Sau96I GGNCC 2 cut(s) 218, 1349
SchI GAGTC 2 cut(s) 375, 890
ScrFI CCNGG 4 cut(s) 222, 255, 847, 848
SfcI CTRYAG 1 cut(s) 753
SfuI TTCGAA 2 cut(s) 111, 144
SinI GGWCC 1 cut(s) 218
SmaI CCCGGG 1 cut(s) 848
SmiMI CAYNNNNRTG 1 cut(s) 190
SmlI CTYRAG 1 cut(s) 1142
SmoI CTYRAG 1 cut(s) 1142
Sse9I AATT 5 cut(s) 595, 741, 865, 1278, 1326
SsiI CCGC 6 cut(s) 104, 182, 196, 452, 1023, 1122
SspMI CTAG 6 cut(s) 263, 363, 429, 590, 983, 1591
StyD4I CCNGG 4 cut(s) 220, 253, 845, 846
StyI CCWWGG 3 cut(s) 1233, 1308, 1538
TaaI ACNGT 6 cut(s) 44, 602, 934, 1110, 1378, 1465
TaiI ACGT 1 cut(s) 15
TaqI TCGA 8 cut(s) 27, 111, 138, 144, 818, 828, 879, 1440
TasI AATT 5 cut(s) 595, 741, 865, 1278, 1326
TatI WGTACW 2 cut(s) 811, 1273
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 9 cut(s) 22, 89, 95, 146, 259, 346, 514, 1036, 1132
Tru1I TTAA 5 cut(s) 230, 864, 915, 987, 1143
Tru9I TTAA 5 cut(s) 230, 864, 915, 987, 1143
TseFI GTSAC 1 cut(s) 925
TseI GCWGC 2 cut(s) 1067, 1382
Tsp45I GTSAC 1 cut(s) 925
TspDTI ATGAA 3 cut(s) 889, 898, 1263
TspGWI ACGGA 2 cut(s) 877, 1567
TspMI CCCGGG 1 cut(s) 846
Vha464I CTTAAG 1 cut(s) 1142
VpaK11BI GGWCC 1 cut(s) 218
XapI RAATTY 1 cut(s) 1278
XbaI TCTAGA 2 cut(s) 262, 589
XmaI CCCGGG 1 cut(s) 846
XmiI GTMKAC 1 cut(s) 1440
XspI CTAG 6 cut(s) 263, 363, 429, 590, 983, 1591
ZraI GACGTC 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.