Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0013937

Physical Location & Seq

Genomic Coordinates Reverse (-)

25087963 .. 25091044

Gene Structure 3082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g33450.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGAGCGCCCAATTGCGCCAAGACCACCAGCCCCTCAGCCATGACGAAGAAGAAGAAGCCGGCCGCTTATTACGCTCTCAGTCCTCGTCAGCCTTGCCGTCCTCCTCCGACGACGATGAGGTGGCGTTCGAGTCGCGGGAGAAGATCCTGATCGTCGACGCCGCCGACGACGATTCGACTGAGGTGCCGCCCTTCTCCTGGAAGAAGCTCTGGCTGTTCACCGGCCCGGGGTTCCTGATGAGCATAGCGTTCTTGGATCCGGGGAATTTAGAAGGAGATCTCCAGGCCGGAGCGATCGCCGGCTACTCTTTGCTCTGGCTGTTAATGTGGGCCACCGCCATGGGCCTTCTCGTCCAGCTGCTCTCCGCGCGGCTCGGAGTCGCCACGGGGCGCCACCTGGCGGAGCTTTGCCGGGAGGAGTATCCCAAGTGGGCCGGGCTGGTGCTGTGGTTCATGGCTGAGCTGGCGTTGATTGGGGCGGATATTCAGGAGGTTATTGGGAGTGCTATTGCTATTCAGATTCTCAGCAATGGCTTTCTGCCGCTCTGGGCCGGAGTTCTCATTACCGCCTCGGATTGTTTCCTTCTTTTAATTCTCGAGAACTATGGGGTGAGGAAGTTGGAAGGTGTTTTTGCAGTTCTCATTGCAACTATGGCTTTATCGTTTGCCTGGATGTTTGTTGACACAAAACCGAATGGAAAAGAACTTTTAATCGGTATTCTGGTTCCCAGACTCAGCTCAAGAACAATTCGGCAGGCTGTGGGAGTTGTGGGTTGTGTCATCATGCCACACAATGTATTTTTGCATTCTGCTTTGGTGCAGTCGAGAAATATTGATCCACACAAGAAAGGACGGGTTCAAGAGGCACTGAACTACTATTCAATTGAGTCGTCGATTGCACTTTTTATCTCCTTCATCATCAATCTGTTTGTCACCACAGTTTTTGCCAAGGGATTTTATGGTACTAAACAAGCTGATAGTCTAGGGCTAGTTAATGCAGGCCAGTTTCTTCAGGAGAAGTATGGAGGAGGGCTTTATCCCATTCTTTATATCTGGGGTGTTGGGTTATTGGCGGCTGGACAAAGTAGCACGATAACTGGGACATATGCCGGGCAGTTTATCATGGGAGGTTTCCTTAATCTCCGTTTGAAGAAGTGGCTGAGGGCCTTGATCACAAGGAGCTTTGCAATAGTGCCAACTATAATTGTGGCAATTGTCTTTAATACGTCAGAAGGGTCGCTGGATGTGTTGAATGAATGGCTTAATGTACTTCAGTCGGTTCAGATACCTTTTGCTCTTATACCACTTCTCACTTTGGTGTCAAATGAGCAGATCATGGGGGTCTTTAAGATTGGACCTCTACTTGAGAAAGTGGCCTGGACTGTGGCTGTTTTGGTGATGGTAATCAATGGTTATCTATTGCTGGATTTCTTCATTGCTGAAGTAAATGGACTTCTGTTTGGTGTTGTGGTATGCAGTGGTACGGCTGCATACTTAGCGTTTATTATTTATCTGGTATTACGTAGTGGTGCTCTTCCCTCCACTTGTTTTGGTTCGGTGTACAAGAGATTTGCTGATACAGACACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0001558 GO:0003674 GO:0005215 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0006810 GO:0006811 GO:0006812 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010035 GO:0010038 GO:0010042 GO:0010053 GO:0010054 GO:0012505 GO:0015075 GO:0015318 GO:0016049 GO:0021700 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0030307 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0040007 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045927 GO:0046873 GO:0046915 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048638 GO:0048639 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051510 GO:0051512 GO:0051716 GO:0055085 GO:0060560 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071287 GO:0071421 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098655 GO:0098660 GO:0098662 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04142 ko04216 ko04978 map04142 map04216 map04978

Pfam Domains

Protein Families

Nramp

Protein Analysis

530

Amino Acids

57.76

Weight (kDa)

5.22

Isoelectric Point (pI)

38.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nramp	PF01566	91 - 452	8.8e-115	Natural resistance-associated macrophage protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47240 AT4G18790
fragaria_vesca	FvH4_2g33450 FvH4_2g33450
malus_domestica	MD08G1089600.v1.1 MD15G1074200.v1.1
prunus_persica	Prupe.1G427000_v2.0.a1 Prupe.1G427000_v2.0.a1
pyrus_communis	pycom08g07290 pycom15g06940
rosa_chinensis	RchiOBHm_Chr6g0309081
rosa_laevigata	RLG00000010591
rosa_roxburghii	Rroxscaffold_7G00159660
rosa_rugosa	Rorug06G0369600
rosa_samantha	Rh6AG482300 Rh6CG496100
rosa_wichuraiana	Rw6G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	184, 390
AccBSI	CCGCTC	1 cut(s)	544
AccI	GTMKAC	1 cut(s)	156
AccII	CGCG	3 cut(s)	136, 368, 370
AclWI	GGATC	4 cut(s)	139, 251, 264, 830
AcoI	YGGCCR	1 cut(s)	61
AcsI	RAATTY	1 cut(s)	265
AcuI	CTGAAG	3 cut(s)	995, 1256, 1461
AcyI	GRCGYC	2 cut(s)	159, 391
AfaI	GTAC	4 cut(s)	964, 1269, 1483, 1562
AfiI	CCNNNNNNNGG	3 cut(s)	198, 228, 400
AgsI	TTSAA	4 cut(s)	860, 882, 1150, 1252
AjnI	CCWGG	5 cut(s)	197, 282, 396, 668, 1376
AleI	CACNNNNGTG	1 cut(s)	1316
AluBI	AGCT	7 cut(s)	208, 358, 406, 463, 738, 974, 1182
AluI	AGCT	7 cut(s)	208, 358, 406, 463, 738, 974, 1182
Alw21I	GWGCWC	1 cut(s)	1534
AlwI	GGATC	4 cut(s)	139, 251, 264, 830
Ama87I	CYCGRG	2 cut(s)	226, 596
ApeKI	GCWGC	2 cut(s)	358, 1487
ApoI	RAATTY	1 cut(s)	265
AsiSI	GCGATCGC	1 cut(s)	297
AspLEI	GCGC	4 cut(s)	8, 18, 370, 393
AspS9I	GGNCC	7 cut(s)	224, 330, 343, 432, 549, 1164, 1355
AsuC2I	CCSGG	6 cut(s)	227, 228, 261, 413, 436, 1111
AsuHPI	GGTGA	4 cut(s)	211, 622, 925, 1408
AvaI	CYCGRG	2 cut(s)	226, 596
AvaII	GGWCC	1 cut(s)	1355
BamHI	GGATCC	1 cut(s)	256
BanI	GGYRCC	2 cut(s)	184, 390
BarI	GAAGNNNNNNTAC	2 cut(s)	1437, 1469
Bbv12I	GWGCWC	1 cut(s)	1534
BbvCI	CCTCAGC	2 cut(s)	35, 1160
BbvI	GCAGC	2 cut(s)	345, 1474
BccI	CCATC	1 cut(s)	1393
BceAI	ACGGC	2 cut(s)	82, 1500
BcgI	CGANNNNNNTGC	2 cut(s)	166, 200
BciT130I	CCWGG	5 cut(s)	199, 284, 398, 670, 1378
BciVI	GTATCC	1 cut(s)	432
BclI	TGATCA	1 cut(s)	1170
BcnI	CCSGG	6 cut(s)	227, 228, 261, 413, 436, 1111
BfaI	CTAG	2 cut(s)	983, 989
BfoI	RGCGCY	2 cut(s)	9, 394
BfuI	GTATCC	1 cut(s)	432
BglII	AGATCT	1 cut(s)	277
BisI	GCNGC	8 cut(s)	64, 162, 188, 359, 371, 542, 1074, 1488
BlpI	GCTNAGC	1 cut(s)	459
BlsI	GCNGC	8 cut(s)	65, 163, 189, 360, 372, 543, 1075, 1489
Bme18I	GGWCC	1 cut(s)	1355
BmeT110I	CYCGRG	2 cut(s)	226, 596
BmgT120I	GGNCC	7 cut(s)	224, 330, 343, 432, 549, 1164, 1355
BmiI	GGNNCC	5 cut(s)	186, 233, 258, 392, 726
BmrI	ACTGGG	1 cut(s)	1107
BmuI	ACTGGG	1 cut(s)	1107
BpmI	CTGGAG	1 cut(s)	266
Bpu10I	CCTNAGC	2 cut(s)	35, 1160
Bpu1102I	GCTNAGC	1 cut(s)	459
BpuEI	CTTGAG	2 cut(s)	724, 1385
BpuMI	CCSGG	6 cut(s)	227, 228, 261, 413, 436, 1111
BsaAI	YACGTR	1 cut(s)	1523
BsaBI	GATNNNNATC	2 cut(s)	149, 1403
BsaHI	GRCGYC	2 cut(s)	159, 391
BsaJI	CCNNGG	7 cut(s)	226, 227, 260, 339, 384, 570, 948
Bsc4I	CCNNNNNNNGG	3 cut(s)	198, 228, 400
Bse118I	RCCGGY	3 cut(s)	59, 221, 299
Bse1I	ACTGG	2 cut(s)	1003, 1102
Bse3DI	GCAATG	3 cut(s)	535, 642, 1434
Bse8I	GATNNNNATC	2 cut(s)	149, 1403
BseBI	CCWGG	5 cut(s)	199, 284, 398, 670, 1378
BseDI	CCNNGG	7 cut(s)	226, 227, 260, 339, 384, 570, 948
BseGI	GGATG	2 cut(s)	678, 1249
BseJI	GATNNNNATC	2 cut(s)	149, 1403
BseLI	CCNNNNNNNGG	3 cut(s)	198, 228, 400
BseMI	GCAATG	3 cut(s)	535, 642, 1434
BseMII	CTCAG	7 cut(s)	49, 92, 171, 450, 538, 748, 1151
BseNI	ACTGG	2 cut(s)	1003, 1102
BseRI	GAGGAG	3 cut(s)	94, 431, 1041
BseX3I	CGGCCG	1 cut(s)	61
BseXI	GCAGC	2 cut(s)	345, 1474
BsgI	GTGCAG	1 cut(s)	839
Bsh1236I	CGCG	3 cut(s)	136, 368, 370
Bsh1285I	CGRYCG	2 cut(s)	64, 297
BshNI	GGYRCC	2 cut(s)	184, 390
BsiEI	CGRYCG	2 cut(s)	64, 297
BsiHKAI	GWGCWC	1 cut(s)	1534
BsiHKCI	CYCGRG	2 cut(s)	226, 596
BslFI	GGGAC	1 cut(s)	1114
BslI	CCNNNNNNNGG	3 cut(s)	198, 228, 400
BsmFI	GGGAC	1 cut(s)	1114
BsmI	GAATGC	1 cut(s)	805
BsoBI	CYCGRG	2 cut(s)	226, 596
Bsp1286I	GDGCHC	1 cut(s)	1534
Bsp1407I	TGTACA	1 cut(s)	1560
Bsp143I	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
Bsp1720I	GCTNAGC	1 cut(s)	459
Bsp19I	CCATGG	1 cut(s)	339
BspCNI	CTCAG	7 cut(s)	48, 91, 172, 451, 537, 747, 1152
BspFNI	CGCG	3 cut(s)	136, 368, 370
BspLI	GGNNCC	5 cut(s)	186, 233, 258, 392, 726
BspPI	GGATC	4 cut(s)	139, 251, 264, 830
BspQI	GCTCTTC	1 cut(s)	1539
BspT107I	GGYRCC	2 cut(s)	184, 390
BsrBI	CCGCTC	1 cut(s)	544
BsrDI	GCAATG	3 cut(s)	535, 642, 1434
BsrFI	RCCGGY	3 cut(s)	59, 221, 299
BsrGI	TGTACA	1 cut(s)	1560
BsrI	ACTGG	2 cut(s)	1003, 1102
BssAI	RCCGGY	3 cut(s)	59, 221, 299
BssECI	CCNNGG	7 cut(s)	226, 227, 260, 339, 384, 570, 948
BssMI	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
BssNI	GRCGYC	2 cut(s)	159, 391
BssT1I	CCWWGG	2 cut(s)	339, 948
Bst2UI	CCWGG	5 cut(s)	199, 284, 398, 670, 1378
Bst4CI	ACNGT	2 cut(s)	940, 1384
Bst6I	CTCTTC	1 cut(s)	1539
BstACI	GRCGYC	2 cut(s)	159, 391
BstAUI	TGTACA	1 cut(s)	1560
BstBAI	YACGTR	1 cut(s)	1523
BstC8I	GCNNGC	5 cut(s)	61, 301, 465, 756, 1000
BstDEI	CTNAG	8 cut(s)	35, 78, 180, 459, 524, 734, 1160, 1495
BstDSI	CCRYGG	2 cut(s)	339, 384
BstF5I	GGATG	2 cut(s)	678, 1249
BstFNI	CGCG	3 cut(s)	136, 368, 370
BstH2I	RGCGCY	2 cut(s)	9, 394
BstHHI	GCGC	4 cut(s)	8, 18, 370, 393
BstKTI	GATC	8 cut(s)	147, 153, 259, 280, 297, 838, 1173, 1335
BstMBI	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
BstMCI	CGRYCG	2 cut(s)	64, 297
BstMWI	GCNNNNNNNGC	5 cut(s)	72, 367, 464, 653, 1496
BstNI	CCWGG	5 cut(s)	199, 284, 398, 670, 1378
BstSNI	TACGTA	1 cut(s)	1523
BstUI	CGCG	3 cut(s)	136, 368, 370
BstV1I	GCAGC	2 cut(s)	345, 1474
BstX2I	RGATCY	3 cut(s)	144, 256, 277
BstXI	CCANNNNNNTGG	1 cut(s)	340
BstYI	RGATCY	3 cut(s)	144, 256, 277
BstZI	CGGCCG	1 cut(s)	61
BsuI	GTATCC	1 cut(s)	432
BtgI	CCRYGG	2 cut(s)	339, 384
BtsCI	GGATG	2 cut(s)	678, 1249
BtsI	GCAGTG	1 cut(s)	1483
BtsIMutI	CAGTG	2 cut(s)	866, 1483
Cac8I	GCNNGC	5 cut(s)	61, 301, 465, 756, 1000
CfoI	GCGC	4 cut(s)	8, 18, 370, 393
Cfr10I	RCCGGY	3 cut(s)	59, 221, 299
Cfr13I	GGNCC	7 cut(s)	224, 330, 343, 432, 549, 1164, 1355
Cfr9I	CCCGGG	1 cut(s)	226
CseI	GACGC	1 cut(s)	167
Csp6I	GTAC	4 cut(s)	963, 1268, 1482, 1561
CspCI	CAANNNNNGTGG	4 cut(s)	925, 960, 1531, 1566
CviAII	CATG	6 cut(s)	41, 340, 454, 784, 1123, 1336
CviQI	GTAC	4 cut(s)	963, 1268, 1482, 1561
DdeI	CTNAG	8 cut(s)	35, 78, 180, 459, 524, 734, 1160, 1495
DinI	GGCGCC	1 cut(s)	392
DpnI	GATC	8 cut(s)	146, 152, 258, 279, 296, 837, 1172, 1334
DpnII	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
EaeI	YGGCCR	1 cut(s)	61
EagI	CGGCCG	1 cut(s)	61
Eam1104I	CTCTTC	1 cut(s)	1539
EarI	CTCTTC	1 cut(s)	1539
EciI	GGCGGA	2 cut(s)	416, 494
EclXI	CGGCCG	1 cut(s)	61
Eco105I	TACGTA	1 cut(s)	1523
Eco130I	CCWWGG	2 cut(s)	339, 948
Eco47I	GGWCC	1 cut(s)	1355
Eco52I	CGGCCG	1 cut(s)	61
Eco57I	CTGAAG	3 cut(s)	995, 1256, 1461
Eco88I	CYCGRG	2 cut(s)	226, 596
EcoO109I	RGGNCCY	1 cut(s)	1164
EcoRII	CCWGG	5 cut(s)	197, 282, 396, 668, 1376
EcoT14I	CCWWGG	2 cut(s)	339, 948
EgeI	GGCGCC	1 cut(s)	392
EheI	GGCGCC	1 cut(s)	392
ErhI	CCWWGG	2 cut(s)	339, 948
FaeI	CATG	6 cut(s)	44, 343, 457, 787, 1126, 1339
FaqI	GGGAC	1 cut(s)	1114
FatI	CATG	6 cut(s)	40, 339, 453, 783, 1122, 1335
FauI	CCCGC	1 cut(s)	129
FauNDI	CATATG	1 cut(s)	1105
FbaI	TGATCA	1 cut(s)	1170
FblI	GTMKAC	1 cut(s)	156
Fnu4HI	GCNGC	8 cut(s)	64, 162, 188, 359, 371, 542, 1074, 1488
FokI	GGATG	2 cut(s)	685, 1256
Fsp4HI	GCNGC	8 cut(s)	64, 162, 188, 359, 371, 542, 1074, 1488
FspBI	CTAG	2 cut(s)	983, 989
GlaI	GCGC	4 cut(s)	7, 17, 369, 392
GluI	GCNGC	8 cut(s)	64, 162, 188, 359, 371, 542, 1074, 1488
GsuI	CTGGAG	1 cut(s)	266
HaeII	RGCGCY	2 cut(s)	9, 394
HgaI	GACGC	1 cut(s)	167
HhaI	GCGC	4 cut(s)	8, 18, 370, 393
Hin1I	GRCGYC	2 cut(s)	159, 391
Hin1II	CATG	6 cut(s)	44, 343, 457, 787, 1126, 1339
Hin6I	GCGC	4 cut(s)	6, 16, 368, 391
HinP1I	GCGC	4 cut(s)	6, 16, 368, 391
HincII	GTYRAC	2 cut(s)	157, 682
HindII	GTYRAC	2 cut(s)	157, 682
HinfI	GANTC	6 cut(s)	131, 173, 378, 520, 732, 887
HphI	GGTGA	4 cut(s)	211, 622, 925, 1408
Hpy166II	GTNNAC	4 cut(s)	157, 219, 682, 1561
Hpy188I	TCNGA	6 cut(s)	109, 377, 519, 574, 1231, 1284
Hpy188III	TCNNGA	9 cut(s)	148, 235, 488, 596, 598, 741, 825, 860, 1013
Hpy8I	GTNNAC	4 cut(s)	157, 219, 682, 1561
Hpy99I	CGWCG	7 cut(s)	113, 116, 158, 161, 170, 173, 895
HpyAV	CCTTC	7 cut(s)	202, 266, 356, 593, 617, 922, 1226
HpyCH4III	ACNGT	2 cut(s)	940, 1384
HpyCH4IV	ACGT	2 cut(s)	1226, 1522
HpyCH4V	TGCA	9 cut(s)	635, 647, 805, 820, 899, 998, 1187, 1476, 1490
HpyF10VI	GCNNNNNNNGC	5 cut(s)	72, 367, 464, 653, 1496
HpyF3I	CTNAG	8 cut(s)	35, 78, 180, 459, 524, 734, 1160, 1495
HpySE526I	ACGT	2 cut(s)	1226, 1522
Hsp92I	GRCGYC	2 cut(s)	159, 391
Hsp92II	CATG	6 cut(s)	44, 343, 457, 787, 1126, 1339
HspAI	GCGC	4 cut(s)	6, 16, 368, 391
KasI	GGCGCC	1 cut(s)	390
KroI	GCCGGC	2 cut(s)	59, 299
KroNI	GCCGGC	2 cut(s)	61, 301
Ksp22I	TGATCA	1 cut(s)	1170
Kzo9I	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
LguI	GCTCTTC	1 cut(s)	1539
LmnI	GCTCC	3 cut(s)	290, 403, 1179
Lsp1109I	GCAGC	2 cut(s)	345, 1474
MaeI	CTAG	2 cut(s)	983, 989
MaeII	ACGT	2 cut(s)	1226, 1522
MaeIII	GTNAC	1 cut(s)	931
MalI	GATC	8 cut(s)	146, 152, 258, 279, 296, 837, 1172, 1334
MbiI	CCGCTC	1 cut(s)	544
MboI	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
MboII	GAAGA	9 cut(s)	59, 62, 65, 154, 214, 1001, 1162, 1423, 1526
MfeI	CAATTG	3 cut(s)	11, 882, 1212
MflI	RGATCY	3 cut(s)	144, 256, 277
MhlI	GDGCHC	1 cut(s)	1534
MluCI	AATT	7 cut(s)	11, 265, 591, 747, 882, 1203, 1212
Mly113I	GGCGCC	1 cut(s)	391
MlyI	GAGTC	4 cut(s)	140, 387, 726, 896
MmeI	TCCRAC	2 cut(s)	132, 600
MroNI	GCCGGC	2 cut(s)	59, 299
MseI	TTAA	9 cut(s)	323, 590, 710, 993, 1137, 1221, 1263, 1347, 1588
MslI	CAYNNNNRTG	2 cut(s)	338, 1316
MspA1I	CMGCKG	1 cut(s)	358
MunI	CAATTG	3 cut(s)	11, 882, 1212
Mva1269I	GAATGC	1 cut(s)	805
MvaI	CCWGG	5 cut(s)	199, 284, 398, 670, 1378
MvnI	CGCG	3 cut(s)	136, 368, 370
MwoI	GCNNNNNNNGC	5 cut(s)	72, 367, 464, 653, 1496
NaeI	GCCGGC	2 cut(s)	61, 301
NarI	GGCGCC	1 cut(s)	391
NciI	CCSGG	6 cut(s)	227, 228, 261, 413, 436, 1111
NcoI	CCATGG	1 cut(s)	339
NdeI	CATATG	1 cut(s)	1105
NdeII	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
NgoMIV	GCCGGC	2 cut(s)	59, 299
NlaIII	CATG	6 cut(s)	44, 343, 457, 787, 1126, 1339
NlaIV	GGNNCC	5 cut(s)	186, 233, 258, 392, 726
NmuCI	GTSAC	1 cut(s)	931
OliI	CACNNNNGTG	1 cut(s)	1316
PaeR7I	CTCGAG	1 cut(s)	596
PciSI	GCTCTTC	1 cut(s)	1539
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 165
PctI	GAATGC	1 cut(s)	805
PdiI	GCCGGC	2 cut(s)	61, 301
PfeI	GAWTC	2 cut(s)	173, 520
PfoI	TCCNGGA	1 cut(s)	197
PkrI	GCNGC	8 cut(s)	65, 163, 189, 360, 372, 543, 1075, 1489
Ple19I	CGATCG	1 cut(s)	297
PleI	GAGTC	4 cut(s)	139, 386, 726, 895
PluTI	GGCGCC	1 cut(s)	394
PpsI	GAGTC	4 cut(s)	139, 386, 726, 895
Ppu21I	YACGTR	1 cut(s)	1523
Psp6I	CCWGG	5 cut(s)	197, 282, 396, 668, 1376
PspGI	CCWGG	5 cut(s)	197, 282, 396, 668, 1376
PspN4I	GGNNCC	5 cut(s)	186, 233, 258, 392, 726
PspPI	GGNCC	7 cut(s)	224, 330, 343, 432, 549, 1164, 1355
PsuI	RGATCY	3 cut(s)	144, 256, 277
PvuI	CGATCG	1 cut(s)	297
PvuII	CAGCTG	1 cut(s)	358
RgaI	GCGATCGC	1 cut(s)	297
RsaI	GTAC	4 cut(s)	964, 1269, 1483, 1562
RsaNI	GTAC	4 cut(s)	963, 1268, 1482, 1561
RseI	CAYNNNNRTG	2 cut(s)	338, 1316
SalI	GTCGAC	1 cut(s)	155
SapI	GCTCTTC	1 cut(s)	1539
SaqAI	TTAA	9 cut(s)	323, 590, 710, 993, 1137, 1221, 1263, 1347, 1588
SatI	GCNGC	8 cut(s)	64, 162, 188, 359, 371, 542, 1074, 1488
Sau3AI	GATC	8 cut(s)	144, 150, 256, 277, 294, 835, 1170, 1332
Sau96I	GGNCC	7 cut(s)	224, 330, 343, 432, 549, 1164, 1355
SchI	GAGTC	4 cut(s)	140, 387, 726, 896
SduI	GDGCHC	1 cut(s)	1534
SfaAI	GCGATCGC	1 cut(s)	297
SfoI	GGCGCC	1 cut(s)	392
Sfr274I	CTCGAG	1 cut(s)	596
SgfI	GCGATCGC	1 cut(s)	297
SgrDI	CGTCGACG	1 cut(s)	155
SinI	GGWCC	1 cut(s)	1355
SlaI	CTCGAG	1 cut(s)	596
SmaI	CCCGGG	1 cut(s)	228
SmiMI	CAYNNNNRTG	2 cut(s)	338, 1316
SmlI	CTYRAG	3 cut(s)	596, 739, 1364
SmoI	CTYRAG	3 cut(s)	596, 739, 1364
SnaBI	TACGTA	1 cut(s)	1523
Sse9I	AATT	7 cut(s)	11, 265, 591, 747, 882, 1203, 1212
SspDI	GGCGCC	1 cut(s)	390
SspI	AATATT	1 cut(s)	832
SspMI	CTAG	2 cut(s)	983, 989
StyI	CCWWGG	2 cut(s)	339, 948
TaaI	ACNGT	2 cut(s)	940, 1384
TaiI	ACGT	2 cut(s)	1229, 1525
TaqI	TCGA	6 cut(s)	129, 156, 176, 597, 824, 893
TasI	AATT	7 cut(s)	11, 265, 591, 747, 882, 1203, 1212
TatI	WGTACW	2 cut(s)	1267, 1560
TauI	GCSGC	6 cut(s)	66, 164, 190, 373, 544, 1076
TfiI	GAWTC	2 cut(s)	173, 520
Tru1I	TTAA	9 cut(s)	323, 590, 710, 993, 1137, 1221, 1263, 1347, 1588
Tru9I	TTAA	9 cut(s)	323, 590, 710, 993, 1137, 1221, 1263, 1347, 1588
TscAI	CASTG	2 cut(s)	873, 1483
TseFI	GTSAC	1 cut(s)	931
TseI	GCWGC	2 cut(s)	358, 1487
Tsp45I	GTSAC	1 cut(s)	931
TspDTI	ATGAA	4 cut(s)	442, 904, 1269, 1423
TspGWI	ACGGA	1 cut(s)	1133
TspMI	CCCGGG	1 cut(s)	226
TspRI	CASTG	2 cut(s)	873, 1483
VpaK11BI	GGWCC	1 cut(s)	1355
XapI	RAATTY	1 cut(s)	265
XhoI	CTCGAG	1 cut(s)	596
XmaI	CCCGGG	1 cut(s)	226
XmiI	GTMKAC	1 cut(s)	156
XspI	CTAG	2 cut(s)	983, 989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.