Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0013937

Physical Location & Seq

Genomic Coordinates Forward (+)

65623204 .. 65626638

Gene Structure 3435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGAGCGCCCAATTGCGCCAAGACGACCAGCTCAGTCAACATGCCAAGGAGGACGACGAAGAAGAAGCCAGCCGCTTATTGCGTCCGCAATCCTCGTCCTCCGACGTCGACGATGAGGTGGCGTACGAGTCGCGGGAGAAGATCCTGATCGTCGACGCCGACTCGGCCGCCGACGACGACGATTCGGCTCAGGTCCCGCCGCCCTTCTCCTGGAAGAAGCTCTGGCTGTTCACAGGCCCGGGGTTCCTGATGAGCATAGCGTTTTTGGATCCGGGGAATTTAGAAGGGGATCTCCAGGCGGGAGCGATCGCCGGCTACTCTTTGCTGTGGCTGTTAATGTGGGCCACCGCCATGGGCCTGCTGGTCCAGCTGCTCTCGGCCCGCCTCGGAGTCGCCACCGGCCGGCACCTGGCGGAGCTCTGCCGCGACGAGTATCCCAAGTGGGCCGGGCTGGTGCTCTGGTTCATGGCTGAGCTGGCGTTGATTGGGGCGGATATTCAGGAGGTCATTGGGAGTGCCATTGCTATTCAGATTCTCAGCAATGGCTTTTTTCCGCTCTGGGCCGGAGTGCTCATTACGGCGTCGGATTGTTTCCTTCTTTTAATTCTTGAGAACTATGGGGTGAGGAAGTTGGAAGGTGTTTTTGCGGTTCTCATTGCAACTATGGCTTTATCGTTTGCCTGGATGTTTGTTGACACAAAACCAAGTGGAAAAGAACTTTTAATCGGTATTCTGGTCCCAAGACTTAGCTCAAGAACAATTCGGCAGGCTGTGGGAGTTGTGGGTTGCGTCATTATGCCACACAATGTATTTTTGCACTCTGCTTTAGTCCAGTCAAGAAATATTGATCCTCAAAAGAAAGGACGGGTTCAAGAGGCACTGAACTACTATTCAATTGAGTCATCAATTGCACTTTTTATCTCCTTCGTCATCAATTTGTTTGTGACCACTGTTTTCGCCAAGGGATTTTATGGTACTAAACAAGCTGATAGTATAGGACTAGTTAATGCAGGTCAGTTTCTTCAGGAGAAGTATGGAGGGGGGCTTTATCCAATTCTTTATATCTGGGGTGTTGGGTTATTGGCAGCTGGACAAAGTAGCACTATAACTGGGACATATGCTGGGCAGTTTATCATGGGAGGCTTCCTTAATCTTCGTTTGAAGAAGTGGCTGAGGGCATTGATCACAAGGAGTTTTGCTATTGTGCCAACTATAATTGTGGCAATTATCTTTAATACATCTGAGGGGTCGCTGGATGTTTTAAATGAGTGGCTTAATGTACTTCAGTCGGTTCAGATTCCTTTTGCTCTTATACCACTTCTCACTTTGGTGTCGAAGGAGCAGATCATGGGGGTCTTCAAGATTGGACCTCTACTCGAAAAAGTGGCATGGACGGTGGCTGTTTTGGTGATGTTAATCAATGGTTATCTATTGCTGGATTTCTTCATTGCTGAAGTTAATGGACTTCTGTTTGGTGTTGTGGTCTGTAGTGGTACGGCTGCATATATAGCGTTTATTATATATCTGGTATTACGCAGCGGTGCCCTTCCTTCCACTTATTTCAATTCAGTGTACAAGAAATTTGCTGATACAGATACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0001558 GO:0003674 GO:0005215 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0006810 GO:0006811 GO:0006812 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010035 GO:0010038 GO:0010042 GO:0010053 GO:0010054 GO:0012505 GO:0015075 GO:0015318 GO:0016049 GO:0021700 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0030307 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0040007 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045927 GO:0046873 GO:0046915 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048638 GO:0048639 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051510 GO:0051512 GO:0051716 GO:0055085 GO:0060560 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071287 GO:0071421 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098655 GO:0098660 GO:0098662 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04142 ko04216 ko04978 map04142 map04216 map04978

Pfam Domains

Protein Families

Nramp

Protein Analysis

533

Amino Acids

58.34

Weight (kDa)

5.01

Isoelectric Point (pI)

35.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nramp	PF01566	95 - 456	4.5e-114	Natural resistance-associated macrophage protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47240 AT4G18790
fragaria_vesca	FvH4_2g33450 FvH4_2g33450
malus_domestica	MD08G1089600.v1.1 MD15G1074200.v1.1
prunus_persica	Prupe.1G427000_v2.0.a1 Prupe.1G427000_v2.0.a1
pyrus_communis	pycom08g07290 pycom15g06940
rosa_chinensis	RchiOBHm_Chr6g0309081
rosa_laevigata	RLG00000010591
rosa_roxburghii	Rroxscaffold_7G00159660
rosa_rugosa	Rorug06G0369600
rosa_samantha	Rh6AG482300 Rh6CG496100
rosa_wichuraiana	Rw6G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	108
Acc36I	ACCTGC	1 cut(s)	1001
AccB1I	GGYRCC	2 cut(s)	405, 1541
AccBSI	CCGCTC	1 cut(s)	556
AccI	GTMKAC	2 cut(s)	108, 153
AccII	CGCG	2 cut(s)	133, 426
AclWI	GGATC	5 cut(s)	136, 263, 276, 297, 842
AcoI	YGGCCR	2 cut(s)	165, 400
AcsI	RAATTY	2 cut(s)	277, 1580
AcuI	CTGAAG	3 cut(s)	1007, 1268, 1473
AcyI	GRCGYC	3 cut(s)	105, 156, 581
AfaI	GTAC	5 cut(s)	125, 976, 1281, 1495, 1574
AfiI	CCNNNNNNNGG	3 cut(s)	210, 402, 409
AgsI	TTSAA	5 cut(s)	872, 894, 1162, 1360, 1564
AhlI	ACTAGT	1 cut(s)	1000
AjnI	CCWGG	4 cut(s)	209, 294, 408, 680
AleI	CACNNNNGTG	1 cut(s)	1328
AluBI	AGCT	8 cut(s)	31, 220, 370, 418, 475, 750, 986, 1088
AluI	AGCT	8 cut(s)	31, 220, 370, 418, 475, 750, 986, 1088
Alw21I	GWGCWC	3 cut(s)	420, 459, 573
AlwI	GGATC	5 cut(s)	136, 263, 276, 297, 842
Ama87I	CYCGRG	1 cut(s)	238
AoxI	GGCC	8 cut(s)	165, 235, 342, 355, 378, 400, 444, 561
ApeKI	GCWGC	4 cut(s)	370, 1085, 1499, 1536
ApoI	RAATTY	2 cut(s)	277, 1580
AsiSI	GCGATCGC	1 cut(s)	309
AspLEI	GCGC	2 cut(s)	8, 18
AsuC2I	CCSGG	4 cut(s)	239, 240, 273, 448
AsuHPI	GGTGA	2 cut(s)	634, 1420
AvaI	CYCGRG	1 cut(s)	238
AvaII	GGWCC	4 cut(s)	193, 364, 736, 1367
BaeGI	GKGCMC	1 cut(s)	1546
BamHI	GGATCC	1 cut(s)	268
BanI	GGYRCC	2 cut(s)	405, 1541
BanII	GRGCYC	1 cut(s)	420
BbsI	GAAGAC	1 cut(s)	1348
Bbv12I	GWGCWC	3 cut(s)	420, 459, 573
BbvCI	CCTCAGC	1 cut(s)	1172
BbvI	GCAGC	4 cut(s)	357, 1097, 1486, 1548
BceAI	ACGGC	2 cut(s)	594, 1512
BciT130I	CCWGG	4 cut(s)	211, 296, 410, 682
BciVI	GTATCC	1 cut(s)	444
BclI	TGATCA	1 cut(s)	1182
BcnI	CCSGG	4 cut(s)	239, 240, 273, 448
BcuI	ACTAGT	1 cut(s)	1000
BfaI	CTAG	1 cut(s)	1001
BfmI	CTRYAG	1 cut(s)	1486
BfoI	RGCGCY	1 cut(s)	9
BfuAI	ACCTGC	1 cut(s)	1001
BfuI	GTATCC	1 cut(s)	444
BglI	GCCNNNNNGGC	1 cut(s)	164
BisI	GCNGC	8 cut(s)	73, 168, 200, 371, 424, 1086, 1500, 1537
BlpI	GCTNAGC	1 cut(s)	471
BlsI	GCNGC	8 cut(s)	74, 169, 201, 372, 425, 1087, 1501, 1538
Bme1390I	CCNGG	8 cut(s)	211, 239, 240, 273, 296, 410, 448, 682
Bme18I	GGWCC	4 cut(s)	193, 364, 736, 1367
BmeT110I	CYCGRG	1 cut(s)	238
BmiI	GGNNCC	6 cut(s)	195, 245, 270, 407, 738, 1543
BmrFI	CCNGG	8 cut(s)	211, 239, 240, 273, 296, 410, 448, 682
BmrI	ACTGGG	1 cut(s)	1119
BmuI	ACTGGG	1 cut(s)	1119
BpiI	GAAGAC	1 cut(s)	1348
BpmI	CTGGAG	1 cut(s)	278
Bpu10I	CCTNAGC	2 cut(s)	189, 1172
Bpu1102I	GCTNAGC	1 cut(s)	471
BpuEI	CTTGAG	2 cut(s)	629, 736
BpuMI	CCSGG	4 cut(s)	239, 240, 273, 448
BsaBI	GATNNNNATC	2 cut(s)	146, 1415
BsaHI	GRCGYC	3 cut(s)	105, 156, 581
BsaJI	CCNNGG	7 cut(s)	45, 238, 239, 272, 351, 385, 960
Bsc4I	CCNNNNNNNGG	3 cut(s)	210, 402, 409
Bse118I	RCCGGY	3 cut(s)	311, 398, 402
Bse1I	ACTGG	2 cut(s)	832, 1114
Bse3DI	GCAATG	4 cut(s)	519, 547, 654, 1446
Bse8I	GATNNNNATC	2 cut(s)	146, 1415
BseBI	CCWGG	4 cut(s)	211, 296, 410, 682
BseDI	CCNNGG	7 cut(s)	45, 238, 239, 272, 351, 385, 960
BseGI	GGATG	2 cut(s)	690, 1261
BseJI	GATNNNNATC	2 cut(s)	146, 1415
BseLI	CCNNNNNNNGG	3 cut(s)	210, 402, 409
BseMI	GCAATG	4 cut(s)	519, 547, 654, 1446
BseMII	CTCAG	6 cut(s)	46, 203, 462, 550, 1163, 1233
BseNI	ACTGG	2 cut(s)	832, 1114
BseSI	GKGCMC	1 cut(s)	1546
BseX3I	CGGCCG	2 cut(s)	165, 400
BseXI	GCAGC	4 cut(s)	357, 1097, 1486, 1548
BseYI	CCCAGC	1 cut(s)	1121
Bsh1236I	CGCG	2 cut(s)	133, 426
Bsh1285I	CGRYCG	3 cut(s)	168, 309, 403
BshFI	GGCC	8 cut(s)	167, 237, 344, 357, 380, 402, 446, 563
BshNI	GGYRCC	2 cut(s)	405, 1541
BsiEI	CGRYCG	3 cut(s)	168, 309, 403
BsiHKAI	GWGCWC	3 cut(s)	420, 459, 573
BsiHKCI	CYCGRG	1 cut(s)	238
BsiSI	CCGG	7 cut(s)	239, 272, 312, 399, 403, 447, 564
BsiWI	CGTACG	1 cut(s)	123
BslFI	GGGAC	3 cut(s)	179, 722, 1126
BslI	CCNNNNNNNGG	3 cut(s)	210, 402, 409
BsmFI	GGGAC	3 cut(s)	179, 722, 1126
BsnI	GGCC	8 cut(s)	167, 237, 344, 357, 380, 402, 446, 563
BsoBI	CYCGRG	1 cut(s)	238
Bsp1286I	GDGCHC	4 cut(s)	420, 459, 573, 1546
Bsp1407I	TGTACA	1 cut(s)	1572
Bsp143I	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
Bsp1720I	GCTNAGC	1 cut(s)	471
Bsp19I	CCATGG	1 cut(s)	351
BspANI	GGCC	8 cut(s)	167, 237, 344, 357, 380, 402, 446, 563
BspCNI	CTCAG	6 cut(s)	45, 202, 463, 549, 1164, 1234
BspFNI	CGCG	2 cut(s)	133, 426
BspLI	GGNNCC	6 cut(s)	195, 245, 270, 407, 738, 1543
BspMI	ACCTGC	1 cut(s)	1001
BspPI	GGATC	5 cut(s)	136, 263, 276, 297, 842
BspT107I	GGYRCC	2 cut(s)	405, 1541
BsrBI	CCGCTC	1 cut(s)	556
BsrDI	GCAATG	4 cut(s)	519, 547, 654, 1446
BsrFI	RCCGGY	3 cut(s)	311, 398, 402
BsrGI	TGTACA	1 cut(s)	1572
BsrI	ACTGG	2 cut(s)	832, 1114
BssAI	RCCGGY	3 cut(s)	311, 398, 402
BssECI	CCNNGG	7 cut(s)	45, 238, 239, 272, 351, 385, 960
BssMI	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
BssNI	GRCGYC	3 cut(s)	105, 156, 581
BssT1I	CCWWGG	3 cut(s)	45, 351, 960
Bst2UI	CCWGG	4 cut(s)	211, 296, 410, 682
Bst4CI	ACNGT	2 cut(s)	952, 1396
BstACI	GRCGYC	3 cut(s)	105, 156, 581
BstAUI	TGTACA	1 cut(s)	1572
BstC8I	GCNNGC	7 cut(s)	70, 313, 359, 382, 404, 477, 768
BstDEI	CTNAG	7 cut(s)	32, 189, 471, 536, 746, 1172, 1242
BstDSI	CCRYGG	1 cut(s)	351
BstF5I	GGATG	2 cut(s)	690, 1261
BstFNI	CGCG	2 cut(s)	133, 426
BstH2I	RGCGCY	1 cut(s)	9
BstHHI	GCGC	2 cut(s)	8, 18
BstKTI	GATC	8 cut(s)	144, 150, 271, 292, 309, 850, 1185, 1347
BstMBI	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
BstMCI	CGRYCG	3 cut(s)	168, 309, 403
BstMWI	GCNNNNNNNGC	5 cut(s)	164, 367, 476, 665, 1508
BstNI	CCWGG	4 cut(s)	211, 296, 410, 682
BstNSI	RCATGY	1 cut(s)	44
BstSCI	CCNGG	8 cut(s)	209, 237, 238, 271, 294, 408, 446, 680
BstSFI	CTRYAG	1 cut(s)	1486
BstSLI	GKGCMC	1 cut(s)	1546
BstUI	CGCG	2 cut(s)	133, 426
BstV1I	GCAGC	4 cut(s)	357, 1097, 1486, 1548
BstV2I	GAAGAC	1 cut(s)	1348
BstX2I	RGATCY	3 cut(s)	141, 268, 289
BstXI	CCANNNNNNTGG	1 cut(s)	352
BstYI	RGATCY	3 cut(s)	141, 268, 289
BstZI	CGGCCG	2 cut(s)	165, 400
BsuI	GTATCC	1 cut(s)	444
BsuRI	GGCC	8 cut(s)	167, 237, 344, 357, 380, 402, 446, 563
BtgI	CCRYGG	1 cut(s)	351
BtsCI	GGATG	2 cut(s)	690, 1261
BtsIMutI	CAGTG	3 cut(s)	878, 948, 1575
BveI	ACCTGC	1 cut(s)	1001
Cac8I	GCNNGC	7 cut(s)	70, 313, 359, 382, 404, 477, 768
CfoI	GCGC	2 cut(s)	8, 18
Cfr10I	RCCGGY	3 cut(s)	311, 398, 402
Cfr9I	CCCGGG	1 cut(s)	238
CseI	GACGC	4 cut(s)	71, 164, 570, 778
Csp6I	GTAC	5 cut(s)	124, 975, 1280, 1494, 1573
CviAII	CATG	6 cut(s)	41, 352, 466, 1135, 1348, 1389
CviQI	GTAC	5 cut(s)	124, 975, 1280, 1494, 1573
DdeI	CTNAG	7 cut(s)	32, 189, 471, 536, 746, 1172, 1242
DpnI	GATC	8 cut(s)	143, 149, 270, 291, 308, 849, 1184, 1346
DpnII	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
DraI	TTTAAA	1 cut(s)	1263
EaeI	YGGCCR	2 cut(s)	165, 400
EagI	CGGCCG	2 cut(s)	165, 400
EciI	GGCGGA	2 cut(s)	428, 506
Ecl136II	GAGCTC	1 cut(s)	418
EclXI	CGGCCG	2 cut(s)	165, 400
Eco130I	CCWWGG	3 cut(s)	45, 351, 960
Eco24I	GRGCYC	1 cut(s)	420
Eco47I	GGWCC	4 cut(s)	193, 364, 736, 1367
Eco52I	CGGCCG	2 cut(s)	165, 400
Eco53kI	GAGCTC	1 cut(s)	418
Eco57I	CTGAAG	3 cut(s)	1007, 1268, 1473
Eco88I	CYCGRG	1 cut(s)	238
EcoICRI	GAGCTC	1 cut(s)	418
EcoO109I	RGGNCCY	1 cut(s)	193
EcoRII	CCWGG	4 cut(s)	209, 294, 408, 680
EcoT14I	CCWWGG	3 cut(s)	45, 351, 960
EcoT38I	GRGCYC	1 cut(s)	420
ErhI	CCWWGG	3 cut(s)	45, 351, 960
FaeI	CATG	6 cut(s)	44, 355, 469, 1138, 1351, 1392
FaqI	GGGAC	3 cut(s)	179, 722, 1126
FatI	CATG	6 cut(s)	40, 351, 465, 1134, 1347, 1388
FauI	CCCGC	4 cut(s)	126, 204, 292, 389
FauNDI	CATATG	1 cut(s)	1117
FbaI	TGATCA	1 cut(s)	1182
FblI	GTMKAC	2 cut(s)	108, 153
Fnu4HI	GCNGC	8 cut(s)	73, 168, 200, 371, 424, 1086, 1500, 1537
FokI	GGATG	2 cut(s)	697, 1268
FriOI	GRGCYC	1 cut(s)	420
Fsp4HI	GCNGC	8 cut(s)	73, 168, 200, 371, 424, 1086, 1500, 1537
FspBI	CTAG	1 cut(s)	1001
GlaI	GCGC	2 cut(s)	7, 17
GluI	GCNGC	8 cut(s)	73, 168, 200, 371, 424, 1086, 1500, 1537
GsaI	CCCAGC	1 cut(s)	1125
GsuI	CTGGAG	1 cut(s)	278
HaeII	RGCGCY	1 cut(s)	9
HaeIII	GGCC	8 cut(s)	167, 237, 344, 357, 380, 402, 446, 563
HapII	CCGG	7 cut(s)	239, 272, 312, 399, 403, 447, 564
HgaI	GACGC	4 cut(s)	71, 164, 570, 778
HhaI	GCGC	2 cut(s)	8, 18
Hin1I	GRCGYC	3 cut(s)	105, 156, 581
Hin1II	CATG	6 cut(s)	44, 355, 469, 1138, 1351, 1392
Hin6I	GCGC	2 cut(s)	6, 16
HinP1I	GCGC	2 cut(s)	6, 16
HincII	GTYRAC	4 cut(s)	38, 109, 154, 694
HindII	GTYRAC	4 cut(s)	38, 109, 154, 694
HinfI	GANTC	7 cut(s)	128, 161, 182, 390, 532, 899, 1297
HpaII	CCGG	7 cut(s)	239, 272, 312, 399, 403, 447, 564
HphI	GGTGA	2 cut(s)	634, 1420
Hpy166II	GTNNAC	6 cut(s)	38, 109, 154, 231, 694, 1573
Hpy188I	TCNGA	6 cut(s)	103, 389, 531, 586, 1243, 1296
Hpy188III	TCNNGA	9 cut(s)	145, 247, 500, 608, 753, 837, 872, 1025, 1360
Hpy8I	GTNNAC	6 cut(s)	38, 109, 154, 231, 694, 1573
HpyAV	CCTTC	8 cut(s)	214, 278, 605, 629, 934, 1330, 1556, 1560
HpyCH4III	ACNGT	2 cut(s)	952, 1396
HpyCH4IV	ACGT	1 cut(s)	105
HpyCH4V	TGCA	5 cut(s)	659, 817, 911, 1010, 1502
HpyF10VI	GCNNNNNNNGC	5 cut(s)	164, 367, 476, 665, 1508
HpyF3I	CTNAG	7 cut(s)	32, 189, 471, 536, 746, 1172, 1242
HpySE526I	ACGT	1 cut(s)	105
Hsp92I	GRCGYC	3 cut(s)	105, 156, 581
Hsp92II	CATG	6 cut(s)	44, 355, 469, 1138, 1351, 1392
HspAI	GCGC	2 cut(s)	6, 16
KroI	GCCGGC	2 cut(s)	311, 402
KroNI	GCCGGC	2 cut(s)	313, 404
Ksp22I	TGATCA	1 cut(s)	1182
Kzo9I	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
LmnI	GCTCC	3 cut(s)	302, 415, 1339
Lsp1109I	GCAGC	4 cut(s)	357, 1097, 1486, 1548
MaeI	CTAG	1 cut(s)	1001
MaeII	ACGT	1 cut(s)	105
MaeIII	GTNAC	1 cut(s)	943
MalI	GATC	8 cut(s)	143, 149, 270, 291, 308, 849, 1184, 1346
MbiI	CCGCTC	1 cut(s)	556
MboI	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
MboII	GAAGA	9 cut(s)	71, 74, 151, 226, 1013, 1145, 1174, 1348, 1435
MfeI	CAATTG	3 cut(s)	11, 894, 906
MflI	RGATCY	3 cut(s)	141, 268, 289
MhlI	GDGCHC	4 cut(s)	420, 459, 573, 1546
MlyI	GAGTC	4 cut(s)	137, 155, 399, 908
MmeI	TCCRAC	3 cut(s)	126, 564, 612
MroNI	GCCGGC	2 cut(s)	311, 402
MslI	CAYNNNNRTG	2 cut(s)	350, 1328
MspA1I	CMGCKG	3 cut(s)	370, 1088, 1539
MspI	CCGG	7 cut(s)	239, 272, 312, 399, 403, 447, 564
MspR9I	CCNGG	8 cut(s)	211, 239, 240, 273, 296, 410, 448, 682
MunI	CAATTG	3 cut(s)	11, 894, 906
MvaI	CCWGG	4 cut(s)	211, 296, 410, 682
MvnI	CGCG	2 cut(s)	133, 426
MwoI	GCNNNNNNNGC	5 cut(s)	164, 367, 476, 665, 1508
NaeI	GCCGGC	2 cut(s)	313, 404
NciI	CCSGG	4 cut(s)	239, 240, 273, 448
NcoI	CCATGG	1 cut(s)	351
NdeI	CATATG	1 cut(s)	1117
NdeII	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
NgoMIV	GCCGGC	2 cut(s)	311, 402
NlaIII	CATG	6 cut(s)	44, 355, 469, 1138, 1351, 1392
NlaIV	GGNNCC	6 cut(s)	195, 245, 270, 407, 738, 1543
NmeAIII	GCCGAG	2 cut(s)	143, 356
NmuCI	GTSAC	1 cut(s)	943
NspI	RCATGY	1 cut(s)	44
OliI	CACNNNNGTG	1 cut(s)	1328
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PdiI	GCCGGC	2 cut(s)	313, 404
PfeI	GAWTC	3 cut(s)	182, 532, 1297
Pfl23II	CGTACG	1 cut(s)	123
PfoI	TCCNGGA	1 cut(s)	209
PkrI	GCNGC	8 cut(s)	74, 169, 201, 372, 425, 1087, 1501, 1538
Ple19I	CGATCG	1 cut(s)	309
PleI	GAGTC	4 cut(s)	136, 155, 398, 907
PpsI	GAGTC	4 cut(s)	136, 155, 398, 907
PpuMI	RGGWCCY	1 cut(s)	193
Psp124BI	GAGCTC	1 cut(s)	420
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	4 cut(s)	209, 294, 408, 680
PspFI	CCCAGC	1 cut(s)	1121
PspGI	CCWGG	4 cut(s)	209, 294, 408, 680
PspLI	CGTACG	1 cut(s)	123
PspN4I	GGNNCC	6 cut(s)	195, 245, 270, 407, 738, 1543
PspPPI	RGGWCCY	1 cut(s)	193
PsuI	RGATCY	3 cut(s)	141, 268, 289
PvuI	CGATCG	1 cut(s)	309
PvuII	CAGCTG	2 cut(s)	370, 1088
RgaI	GCGATCGC	1 cut(s)	309
RsaI	GTAC	5 cut(s)	125, 976, 1281, 1495, 1574
RsaNI	GTAC	5 cut(s)	124, 975, 1280, 1494, 1573
RseI	CAYNNNNRTG	2 cut(s)	350, 1328
SacI	GAGCTC	1 cut(s)	420
SalI	GTCGAC	2 cut(s)	107, 152
SatI	GCNGC	8 cut(s)	73, 168, 200, 371, 424, 1086, 1500, 1537
Sau3AI	GATC	8 cut(s)	141, 147, 268, 289, 306, 847, 1182, 1344
SchI	GAGTC	4 cut(s)	137, 155, 399, 908
ScrFI	CCNGG	8 cut(s)	211, 239, 240, 273, 296, 410, 448, 682
SduI	GDGCHC	4 cut(s)	420, 459, 573, 1546
SfaAI	GCGATCGC	1 cut(s)	309
SfcI	CTRYAG	1 cut(s)	1486
SgfI	GCGATCGC	1 cut(s)	309
SgrDI	CGTCGACG	2 cut(s)	107, 152
SinI	GGWCC	4 cut(s)	193, 364, 736, 1367
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	2 cut(s)	350, 1328
SmlI	CTYRAG	2 cut(s)	608, 751
SmoI	CTYRAG	2 cut(s)	608, 751
SpeI	ACTAGT	1 cut(s)	1000
SspI	AATATT	1 cut(s)	844
SspMI	CTAG	1 cut(s)	1001
SstI	GAGCTC	1 cut(s)	420
StyD4I	CCNGG	8 cut(s)	209, 237, 238, 271, 294, 408, 446, 680
StyI	CCWWGG	3 cut(s)	45, 351, 960
TaaI	ACNGT	2 cut(s)	952, 1396
TaiI	ACGT	1 cut(s)	108
TaqI	TCGA	4 cut(s)	108, 153, 1334, 1377
TatI	WGTACW	2 cut(s)	1279, 1572
TauI	GCSGC	4 cut(s)	75, 170, 202, 426
TfiI	GAWTC	3 cut(s)	182, 532, 1297
TscAI	CASTG	3 cut(s)	885, 955, 1575
TseFI	GTSAC	1 cut(s)	943
TseI	GCWGC	4 cut(s)	370, 1085, 1499, 1536
Tsp45I	GTSAC	1 cut(s)	943
TspDTI	ATGAA	2 cut(s)	454, 1435
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	3 cut(s)	885, 955, 1575
VpaK11BI	GGWCC	4 cut(s)	193, 364, 736, 1367
XapI	RAATTY	2 cut(s)	277, 1580
XceI	RCATGY	1 cut(s)	44
XcmI	CCANNNNNNNNNTGG	1 cut(s)	358
XmaI	CCCGGG	1 cut(s)	238
XmiI	GTMKAC	2 cut(s)	108, 153
XspI	CTAG	1 cut(s)	1001
ZraI	GACGTC	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.