Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0013937

Physical Location & Seq

Genomic Coordinates Forward (+)

66179763 .. 66182566

Gene Structure 2804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG496100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGAGCGCCGAATTGCGGCAAGACGACCAGCTCAGTCAACATGCCAAGGACGACGACAAAGAAGAAGCCAGCCGCTTATTGCGTCCGCAATCCTCGTCCTCCGACGTCGACGATGAAGTGGCGTACGAGTCGCGGGAGAAGATCCTGATCGTCGACGCCGACTCGGCCGCCGCCGACGACGACGATTCGACTCAGGTCCCGCCGCCCTTCTCCTGGAAGAAGCTCTGGCTGTTCACAGGCCCGGGGTTCCTGATGAGCATAGCGTTTTTGGATCCGGGGAATTTAGAAGGGGATCTCCAGTCGGGAGCGATCGCCGGCTACTCTTTGCTGTGGCTGTTAATGTGGGCCACCGCCATGGGCCTGCTGGTCCAGCTGCTCTCGGCCCGCCTCGGAGTCGCCACCGGCCGGCACCTGGCGGAGCTCTGCCGCGACGAGTATCCCAAGTGGGCCGGGCTGGTGCTCTGGTTCATGGCTGAGCTGGCGTTGATTGGGGCGGATATTCAGGAGGTCATTGGGAGTGCCATTGCTATTCAGATTCTCAGCAATGGCTTTTTGCCGCTCTGGGCCGGAGTGCTCATTACGGCGTCGGATTGTTTCCTTCTTTTAATTCTTGAGAACTATGGGGTGAGGAAGTTGGAAGGTGTTTTTGCGGTTCTCATTGCAACTATGGCTTTATCGTTTGCCTGGATGTTTGTTGACACAAAACCAAGTGGAAAAGAACTTTTAATCGGTATTCTGGTTCCAAGACTTAGCTCAAGAACAATTCGGCAGGCTGTGGGAGTTGTGGGTTGCGTCATTATGCCACACAATGTATTTTTGCACTCTGCTTTAGTCCAGTCAAGAAATATTGATCCTCACAAGAAAGGACGGGTTCAAGAGGCACTGAACTACTATTCAATTGAGTCATCAATTGCACTTTTTATCTCCTTCGTCATCAATTTGTTTGTGACCACTGTTTTCGCCAAGGGATTTTATGGTACTAAACAAGCTGATAGTATAGGACTAGTTAATGCAGGTCAGTTTCTTCAGGAGAAGTATGGAGGGGGGCTTTATCCAATTCTTTATATCTGGGGTGTTGGGTTATTGGCAGCTGGACAAAGTAGCACAATAACTGGGACATATGCTGGGCAGTTTATCATGGGAGGCTTCCTTAATCTTCGTTTGAAGAAGTGGCTGAGGGCATTGATCACAAGGAGTTTTGCTATTGTGCCAACTATAATTGTGGCAATTATCTTTAATACGTCTGAGGGGTCGCTGGATGTTTTAAATGAGTGGCTTAATGTACTTCAGTCGGTTCAGATTCCTTTTGCTCTTATACCACTTCTCACTTTGGTGTCGAAGGAGCAGATCATGGGGGTCTTCAAGATTGGACCTCTACTCGAAAAAGTGGCATGGACGGTGGCTGTTTTGGTGATGGTAATCAATGGTTATCTATTGCTGGATTTCTTCATTGCTGAAGTTAATGGACTTCTGTTTAGTGTTGTGGTCTGTAGTGGTACGGCTGCATATGTAGCGTTTATTATATATCTGGTATTACGCAGCGGTGCCCTTCCTTCCACTTATTTCAATTCAGTGTACAAGAGATTTGCTGATACAGATACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0001558 GO:0003674 GO:0005215 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0006810 GO:0006811 GO:0006812 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010035 GO:0010038 GO:0010042 GO:0010053 GO:0010054 GO:0012505 GO:0015075 GO:0015318 GO:0016049 GO:0021700 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0030307 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0040007 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045927 GO:0046873 GO:0046915 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048638 GO:0048639 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051510 GO:0051512 GO:0051716 GO:0055085 GO:0060560 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071287 GO:0071421 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098655 GO:0098660 GO:0098662 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04142 ko04216 ko04978 map04142 map04216 map04978

Pfam Domains

Protein Families

Nramp

Protein Analysis

534

Amino Acids

58.45

Weight (kDa)

5.15

Isoelectric Point (pI)

35.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nramp	PF01566	96 - 457	1.3e-113	Natural resistance-associated macrophage protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47240 AT4G18790
fragaria_vesca	FvH4_2g33450 FvH4_2g33450
malus_domestica	MD08G1089600.v1.1 MD15G1074200.v1.1
prunus_persica	Prupe.1G427000_v2.0.a1 Prupe.1G427000_v2.0.a1
pyrus_communis	pycom08g07290 pycom15g06940
rosa_chinensis	RchiOBHm_Chr6g0309081
rosa_laevigata	RLG00000010591
rosa_roxburghii	Rroxscaffold_7G00159660
rosa_rugosa	Rorug06G0369600
rosa_samantha	Rh6AG482300 Rh6CG496100
rosa_wichuraiana	Rw6G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	108
Acc36I	ACCTGC	1 cut(s)	1004
AccB1I	GGYRCC	2 cut(s)	408, 1544
AccBSI	CCGCTC	1 cut(s)	559
AccI	GTMKAC	2 cut(s)	108, 153
AccII	CGCG	2 cut(s)	133, 429
AclWI	GGATC	5 cut(s)	136, 266, 279, 300, 845
AcoI	YGGCCR	2 cut(s)	165, 403
AcsI	RAATTY	1 cut(s)	280
AcuI	CTGAAG	3 cut(s)	1010, 1271, 1476
AcyI	GRCGYC	3 cut(s)	105, 156, 584
AfaI	GTAC	5 cut(s)	125, 979, 1284, 1498, 1577
AfiI	CCNNNNNNNGG	4 cut(s)	15, 213, 405, 412
AgsI	TTSAA	5 cut(s)	875, 897, 1165, 1363, 1567
AhlI	ACTAGT	1 cut(s)	1003
AjnI	CCWGG	3 cut(s)	212, 411, 683
AleI	CACNNNNGTG	1 cut(s)	1331
AluBI	AGCT	8 cut(s)	31, 223, 373, 421, 478, 753, 989, 1091
AluI	AGCT	8 cut(s)	31, 223, 373, 421, 478, 753, 989, 1091
Alw21I	GWGCWC	3 cut(s)	423, 462, 576
AlwI	GGATC	5 cut(s)	136, 266, 279, 300, 845
Ama87I	CYCGRG	1 cut(s)	241
AoxI	GGCC	8 cut(s)	165, 238, 345, 358, 381, 403, 447, 564
ApeKI	GCWGC	4 cut(s)	373, 1088, 1502, 1539
ApoI	RAATTY	1 cut(s)	280
AsiSI	GCGATCGC	1 cut(s)	312
AspLEI	GCGC	1 cut(s)	8
AspS9I	GGNCC	9 cut(s)	196, 239, 345, 358, 367, 382, 447, 564, 1370
AsuC2I	CCSGG	4 cut(s)	242, 243, 276, 451
AsuHPI	GGTGA	2 cut(s)	637, 1423
AvaI	CYCGRG	1 cut(s)	241
AvaII	GGWCC	3 cut(s)	196, 367, 1370
BaeGI	GKGCMC	1 cut(s)	1549
BamHI	GGATCC	1 cut(s)	271
BanI	GGYRCC	2 cut(s)	408, 1544
BanII	GRGCYC	1 cut(s)	423
BbsI	GAAGAC	1 cut(s)	1351
Bbv12I	GWGCWC	3 cut(s)	423, 462, 576
BbvCI	CCTCAGC	1 cut(s)	1175
BbvI	GCAGC	4 cut(s)	360, 1100, 1489, 1551
BccI	CCATC	1 cut(s)	1408
BceAI	ACGGC	2 cut(s)	597, 1515
BciT130I	CCWGG	3 cut(s)	214, 413, 685
BciVI	GTATCC	1 cut(s)	447
BclI	TGATCA	1 cut(s)	1185
BcnI	CCSGG	4 cut(s)	242, 243, 276, 451
BcuI	ACTAGT	1 cut(s)	1003
BfaI	CTAG	1 cut(s)	1004
BfmI	CTRYAG	1 cut(s)	1489
BfoI	RGCGCY	1 cut(s)	9
BfuAI	ACCTGC	1 cut(s)	1004
BfuI	GTATCC	1 cut(s)	447
BglI	GCCNNNNNGGC	1 cut(s)	164
BlpI	GCTNAGC	1 cut(s)	474
Bme1390I	CCNGG	7 cut(s)	214, 242, 243, 276, 413, 451, 685
Bme18I	GGWCC	3 cut(s)	196, 367, 1370
BmeT110I	CYCGRG	1 cut(s)	241
BmgT120I	GGNCC	9 cut(s)	196, 239, 345, 358, 367, 382, 447, 564, 1370
BmiI	GGNNCC	6 cut(s)	198, 248, 273, 410, 741, 1546
BmrFI	CCNGG	7 cut(s)	214, 242, 243, 276, 413, 451, 685
BmrI	ACTGGG	1 cut(s)	1122
BmuI	ACTGGG	1 cut(s)	1122
BoxI	GACNNNNGTC	1 cut(s)	194
BpiI	GAAGAC	1 cut(s)	1351
BpmI	CTGGAG	1 cut(s)	281
Bpu10I	CCTNAGC	1 cut(s)	1175
Bpu1102I	GCTNAGC	1 cut(s)	474
BpuEI	CTTGAG	2 cut(s)	632, 739
BpuMI	CCSGG	4 cut(s)	242, 243, 276, 451
BsaBI	GATNNNNATC	2 cut(s)	146, 1418
BsaHI	GRCGYC	3 cut(s)	105, 156, 584
BsaJI	CCNNGG	7 cut(s)	45, 241, 242, 275, 354, 388, 963
Bsc4I	CCNNNNNNNGG	4 cut(s)	15, 213, 405, 412
Bse118I	RCCGGY	3 cut(s)	314, 401, 405
Bse1I	ACTGG	3 cut(s)	298, 835, 1117
Bse3DI	GCAATG	4 cut(s)	522, 550, 657, 1449
Bse8I	GATNNNNATC	2 cut(s)	146, 1418
BseBI	CCWGG	3 cut(s)	214, 413, 685
BseDI	CCNNGG	7 cut(s)	45, 241, 242, 275, 354, 388, 963
BseGI	GGATG	2 cut(s)	693, 1264
BseJI	GATNNNNATC	2 cut(s)	146, 1418
BseLI	CCNNNNNNNGG	4 cut(s)	15, 213, 405, 412
BseMI	GCAATG	4 cut(s)	522, 550, 657, 1449
BseMII	CTCAG	6 cut(s)	46, 206, 465, 553, 1166, 1236
BseNI	ACTGG	3 cut(s)	298, 835, 1117
BseSI	GKGCMC	1 cut(s)	1549
BseX3I	CGGCCG	2 cut(s)	165, 403
BseXI	GCAGC	4 cut(s)	360, 1100, 1489, 1551
BseYI	CCCAGC	1 cut(s)	1124
Bsh1236I	CGCG	2 cut(s)	133, 429
Bsh1285I	CGRYCG	3 cut(s)	168, 312, 406
BshFI	GGCC	8 cut(s)	167, 240, 347, 360, 383, 405, 449, 566
BshNI	GGYRCC	2 cut(s)	408, 1544
BsiEI	CGRYCG	3 cut(s)	168, 312, 406
BsiHKAI	GWGCWC	3 cut(s)	423, 462, 576
BsiHKCI	CYCGRG	1 cut(s)	241
BsiSI	CCGG	7 cut(s)	242, 275, 315, 402, 406, 450, 567
BsiWI	CGTACG	1 cut(s)	123
BslFI	GGGAC	2 cut(s)	182, 1129
BslI	CCNNNNNNNGG	4 cut(s)	15, 213, 405, 412
BsmFI	GGGAC	2 cut(s)	182, 1129
BsnI	GGCC	8 cut(s)	167, 240, 347, 360, 383, 405, 449, 566
BsoBI	CYCGRG	1 cut(s)	241
Bsp1286I	GDGCHC	4 cut(s)	423, 462, 576, 1549
Bsp1407I	TGTACA	1 cut(s)	1575
Bsp143I	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
Bsp1720I	GCTNAGC	1 cut(s)	474
Bsp19I	CCATGG	1 cut(s)	354
BspANI	GGCC	8 cut(s)	167, 240, 347, 360, 383, 405, 449, 566
BspCNI	CTCAG	6 cut(s)	45, 205, 466, 552, 1167, 1237
BspFNI	CGCG	2 cut(s)	133, 429
BspLI	GGNNCC	6 cut(s)	198, 248, 273, 410, 741, 1546
BspMI	ACCTGC	1 cut(s)	1004
BspPI	GGATC	5 cut(s)	136, 266, 279, 300, 845
BspT107I	GGYRCC	2 cut(s)	408, 1544
BsrBI	CCGCTC	1 cut(s)	559
BsrDI	GCAATG	4 cut(s)	522, 550, 657, 1449
BsrFI	RCCGGY	3 cut(s)	314, 401, 405
BsrGI	TGTACA	1 cut(s)	1575
BsrI	ACTGG	3 cut(s)	298, 835, 1117
BssAI	RCCGGY	3 cut(s)	314, 401, 405
BssECI	CCNNGG	7 cut(s)	45, 241, 242, 275, 354, 388, 963
BssMI	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
BssNI	GRCGYC	3 cut(s)	105, 156, 584
BssT1I	CCWWGG	3 cut(s)	45, 354, 963
Bst2UI	CCWGG	3 cut(s)	214, 413, 685
Bst4CI	ACNGT	2 cut(s)	955, 1399
BstACI	GRCGYC	3 cut(s)	105, 156, 584
BstAUI	TGTACA	1 cut(s)	1575
BstC8I	GCNNGC	7 cut(s)	70, 316, 362, 385, 407, 480, 771
BstDEI	CTNAG	7 cut(s)	32, 192, 474, 539, 749, 1175, 1245
BstDSI	CCRYGG	1 cut(s)	354
BstF5I	GGATG	2 cut(s)	693, 1264
BstFNI	CGCG	2 cut(s)	133, 429
BstH2I	RGCGCY	1 cut(s)	9
BstHHI	GCGC	1 cut(s)	8
BstKTI	GATC	8 cut(s)	144, 150, 274, 295, 312, 853, 1188, 1350
BstMBI	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
BstMCI	CGRYCG	3 cut(s)	168, 312, 406
BstMWI	GCNNNNNNNGC	5 cut(s)	164, 370, 479, 668, 1511
BstNI	CCWGG	3 cut(s)	214, 413, 685
BstNSI	RCATGY	1 cut(s)	44
BstPAI	GACNNNNGTC	1 cut(s)	194
BstSCI	CCNGG	7 cut(s)	212, 240, 241, 274, 411, 449, 683
BstSFI	CTRYAG	1 cut(s)	1489
BstSLI	GKGCMC	1 cut(s)	1549
BstUI	CGCG	2 cut(s)	133, 429
BstV1I	GCAGC	4 cut(s)	360, 1100, 1489, 1551
BstV2I	GAAGAC	1 cut(s)	1351
BstX2I	RGATCY	3 cut(s)	141, 271, 292
BstXI	CCANNNNNNTGG	1 cut(s)	355
BstYI	RGATCY	3 cut(s)	141, 271, 292
BstZI	CGGCCG	2 cut(s)	165, 403
BsuI	GTATCC	1 cut(s)	447
BsuRI	GGCC	8 cut(s)	167, 240, 347, 360, 383, 405, 449, 566
BtgI	CCRYGG	1 cut(s)	354
BtsCI	GGATG	2 cut(s)	693, 1264
BtsIMutI	CAGTG	3 cut(s)	881, 951, 1578
BveI	ACCTGC	1 cut(s)	1004
Cac8I	GCNNGC	7 cut(s)	70, 316, 362, 385, 407, 480, 771
CfoI	GCGC	1 cut(s)	8
Cfr10I	RCCGGY	3 cut(s)	314, 401, 405
Cfr13I	GGNCC	9 cut(s)	196, 239, 345, 358, 367, 382, 447, 564, 1370
Cfr9I	CCCGGG	1 cut(s)	241
CseI	GACGC	4 cut(s)	71, 164, 573, 781
Csp6I	GTAC	5 cut(s)	124, 978, 1283, 1497, 1576
CviAII	CATG	6 cut(s)	41, 355, 469, 1138, 1351, 1392
CviQI	GTAC	5 cut(s)	124, 978, 1283, 1497, 1576
DdeI	CTNAG	7 cut(s)	32, 192, 474, 539, 749, 1175, 1245
DpnI	GATC	8 cut(s)	143, 149, 273, 294, 311, 852, 1187, 1349
DpnII	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
DraI	TTTAAA	1 cut(s)	1266
EaeI	YGGCCR	2 cut(s)	165, 403
EagI	CGGCCG	2 cut(s)	165, 403
EciI	GGCGGA	2 cut(s)	431, 509
Ecl136II	GAGCTC	1 cut(s)	421
EclXI	CGGCCG	2 cut(s)	165, 403
Eco130I	CCWWGG	3 cut(s)	45, 354, 963
Eco24I	GRGCYC	1 cut(s)	423
Eco47I	GGWCC	3 cut(s)	196, 367, 1370
Eco52I	CGGCCG	2 cut(s)	165, 403
Eco53kI	GAGCTC	1 cut(s)	421
Eco57I	CTGAAG	3 cut(s)	1010, 1271, 1476
Eco88I	CYCGRG	1 cut(s)	241
EcoICRI	GAGCTC	1 cut(s)	421
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRII	CCWGG	3 cut(s)	212, 411, 683
EcoT14I	CCWWGG	3 cut(s)	45, 354, 963
EcoT38I	GRGCYC	1 cut(s)	423
ErhI	CCWWGG	3 cut(s)	45, 354, 963
FaeI	CATG	6 cut(s)	44, 358, 472, 1141, 1354, 1395
FaqI	GGGAC	2 cut(s)	182, 1129
FatI	CATG	6 cut(s)	40, 354, 468, 1137, 1350, 1391
FauI	CCCGC	3 cut(s)	126, 207, 392
FauNDI	CATATG	2 cut(s)	1120, 1507
FbaI	TGATCA	1 cut(s)	1185
FblI	GTMKAC	2 cut(s)	108, 153
FokI	GGATG	2 cut(s)	700, 1271
FriOI	GRGCYC	1 cut(s)	423
FspBI	CTAG	1 cut(s)	1004
GlaI	GCGC	1 cut(s)	7
GsaI	CCCAGC	1 cut(s)	1128
GsuI	CTGGAG	1 cut(s)	281
HaeII	RGCGCY	1 cut(s)	9
HaeIII	GGCC	8 cut(s)	167, 240, 347, 360, 383, 405, 449, 566
HapII	CCGG	7 cut(s)	242, 275, 315, 402, 406, 450, 567
HgaI	GACGC	4 cut(s)	71, 164, 573, 781
HhaI	GCGC	1 cut(s)	8
Hin1I	GRCGYC	3 cut(s)	105, 156, 584
Hin1II	CATG	6 cut(s)	44, 358, 472, 1141, 1354, 1395
Hin6I	GCGC	1 cut(s)	6
HinP1I	GCGC	1 cut(s)	6
HincII	GTYRAC	4 cut(s)	38, 109, 154, 697
HindII	GTYRAC	4 cut(s)	38, 109, 154, 697
HinfI	GANTC	8 cut(s)	128, 161, 185, 190, 393, 535, 902, 1300
HpaII	CCGG	7 cut(s)	242, 275, 315, 402, 406, 450, 567
HphI	GGTGA	2 cut(s)	637, 1423
Hpy166II	GTNNAC	6 cut(s)	38, 109, 154, 234, 697, 1576
Hpy188I	TCNGA	6 cut(s)	103, 392, 534, 589, 1246, 1299
Hpy8I	GTNNAC	6 cut(s)	38, 109, 154, 234, 697, 1576
HpyAV	CCTTC	8 cut(s)	217, 281, 608, 632, 937, 1333, 1559, 1563
HpyCH4III	ACNGT	2 cut(s)	955, 1399
HpyCH4IV	ACGT	2 cut(s)	105, 1241
HpyCH4V	TGCA	5 cut(s)	662, 820, 914, 1013, 1505
HpyF10VI	GCNNNNNNNGC	5 cut(s)	164, 370, 479, 668, 1511
HpyF3I	CTNAG	7 cut(s)	32, 192, 474, 539, 749, 1175, 1245
HpySE526I	ACGT	2 cut(s)	105, 1241
Hsp92I	GRCGYC	3 cut(s)	105, 156, 584
Hsp92II	CATG	6 cut(s)	44, 358, 472, 1141, 1354, 1395
HspAI	GCGC	1 cut(s)	6
KroI	GCCGGC	2 cut(s)	314, 405
KroNI	GCCGGC	2 cut(s)	316, 407
Ksp22I	TGATCA	1 cut(s)	1185
Kzo9I	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
LmnI	GCTCC	3 cut(s)	305, 418, 1342
Lsp1109I	GCAGC	4 cut(s)	360, 1100, 1489, 1551
MaeI	CTAG	1 cut(s)	1004
MaeII	ACGT	2 cut(s)	105, 1241
MaeIII	GTNAC	1 cut(s)	946
MalI	GATC	8 cut(s)	143, 149, 273, 294, 311, 852, 1187, 1349
MbiI	CCGCTC	1 cut(s)	559
MboI	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
MboII	GAAGA	8 cut(s)	74, 151, 229, 1016, 1148, 1177, 1351, 1438
MfeI	CAATTG	2 cut(s)	897, 909
MflI	RGATCY	3 cut(s)	141, 271, 292
MhlI	GDGCHC	4 cut(s)	423, 462, 576, 1549
MlyI	GAGTC	5 cut(s)	137, 155, 184, 402, 911
MmeI	TCCRAC	3 cut(s)	126, 567, 615
MroNI	GCCGGC	2 cut(s)	314, 405
MslI	CAYNNNNRTG	2 cut(s)	353, 1331
MspA1I	CMGCKG	3 cut(s)	373, 1091, 1542
MspI	CCGG	7 cut(s)	242, 275, 315, 402, 406, 450, 567
MspR9I	CCNGG	7 cut(s)	214, 242, 243, 276, 413, 451, 685
MunI	CAATTG	2 cut(s)	897, 909
MvaI	CCWGG	3 cut(s)	214, 413, 685
MvnI	CGCG	2 cut(s)	133, 429
MwoI	GCNNNNNNNGC	5 cut(s)	164, 370, 479, 668, 1511
NaeI	GCCGGC	2 cut(s)	316, 407
NciI	CCSGG	4 cut(s)	242, 243, 276, 451
NcoI	CCATGG	1 cut(s)	354
NdeI	CATATG	2 cut(s)	1120, 1507
NdeII	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
NgoMIV	GCCGGC	2 cut(s)	314, 405
NlaIII	CATG	6 cut(s)	44, 358, 472, 1141, 1354, 1395
NlaIV	GGNNCC	6 cut(s)	198, 248, 273, 410, 741, 1546
NmeAIII	GCCGAG	2 cut(s)	143, 359
NmuCI	GTSAC	1 cut(s)	946
NspI	RCATGY	1 cut(s)	44
OliI	CACNNNNGTG	1 cut(s)	1331
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PdiI	GCCGGC	2 cut(s)	316, 407
PfeI	GAWTC	3 cut(s)	185, 535, 1300
Pfl23II	CGTACG	1 cut(s)	123
PfoI	TCCNGGA	1 cut(s)	212
Ple19I	CGATCG	1 cut(s)	312
PleI	GAGTC	5 cut(s)	136, 155, 184, 401, 910
PpsI	GAGTC	5 cut(s)	136, 155, 184, 401, 910
PpuMI	RGGWCCY	1 cut(s)	196
PshAI	GACNNNNGTC	1 cut(s)	194
Psp124BI	GAGCTC	1 cut(s)	423
Psp5II	RGGWCCY	1 cut(s)	196
Psp6I	CCWGG	3 cut(s)	212, 411, 683
PspFI	CCCAGC	1 cut(s)	1124
PspGI	CCWGG	3 cut(s)	212, 411, 683
PspLI	CGTACG	1 cut(s)	123
PspN4I	GGNNCC	6 cut(s)	198, 248, 273, 410, 741, 1546
PspPI	GGNCC	9 cut(s)	196, 239, 345, 358, 367, 382, 447, 564, 1370
PspPPI	RGGWCCY	1 cut(s)	196
PsuI	RGATCY	3 cut(s)	141, 271, 292
PvuI	CGATCG	1 cut(s)	312
PvuII	CAGCTG	2 cut(s)	373, 1091
RgaI	GCGATCGC	1 cut(s)	312
RsaI	GTAC	5 cut(s)	125, 979, 1284, 1498, 1577
RsaNI	GTAC	5 cut(s)	124, 978, 1283, 1497, 1576
RseI	CAYNNNNRTG	2 cut(s)	353, 1331
SacI	GAGCTC	1 cut(s)	423
SalI	GTCGAC	2 cut(s)	107, 152
Sau3AI	GATC	8 cut(s)	141, 147, 271, 292, 309, 850, 1185, 1347
Sau96I	GGNCC	9 cut(s)	196, 239, 345, 358, 367, 382, 447, 564, 1370
SchI	GAGTC	5 cut(s)	137, 155, 184, 402, 911
ScrFI	CCNGG	7 cut(s)	214, 242, 243, 276, 413, 451, 685
SduI	GDGCHC	4 cut(s)	423, 462, 576, 1549
SfaAI	GCGATCGC	1 cut(s)	312
SfcI	CTRYAG	1 cut(s)	1489
SgfI	GCGATCGC	1 cut(s)	312
SgrDI	CGTCGACG	2 cut(s)	107, 152
SinI	GGWCC	3 cut(s)	196, 367, 1370
SmaI	CCCGGG	1 cut(s)	243
SmiMI	CAYNNNNRTG	2 cut(s)	353, 1331
SmlI	CTYRAG	2 cut(s)	611, 754
SmoI	CTYRAG	2 cut(s)	611, 754
SpeI	ACTAGT	1 cut(s)	1003
SspI	AATATT	1 cut(s)	847
SspMI	CTAG	1 cut(s)	1004
SstI	GAGCTC	1 cut(s)	423
StyD4I	CCNGG	7 cut(s)	212, 240, 241, 274, 411, 449, 683
StyI	CCWWGG	3 cut(s)	45, 354, 963
TaaI	ACNGT	2 cut(s)	955, 1399
TaiI	ACGT	2 cut(s)	108, 1244
TaqI	TCGA	5 cut(s)	108, 153, 188, 1337, 1380
TatI	WGTACW	2 cut(s)	1282, 1575
TauI	GCSGC	7 cut(s)	19, 75, 170, 173, 205, 429, 559
TfiI	GAWTC	3 cut(s)	185, 535, 1300
TscAI	CASTG	3 cut(s)	888, 958, 1578
TseFI	GTSAC	1 cut(s)	946
TseI	GCWGC	4 cut(s)	373, 1088, 1502, 1539
Tsp45I	GTSAC	1 cut(s)	946
TspDTI	ATGAA	3 cut(s)	129, 457, 1438
TspMI	CCCGGG	1 cut(s)	241
TspRI	CASTG	3 cut(s)	888, 958, 1578
VpaK11BI	GGWCC	3 cut(s)	196, 367, 1370
XapI	RAATTY	1 cut(s)	280
XceI	RCATGY	1 cut(s)	44
XcmI	CCANNNNNNNNNTGG	1 cut(s)	361
XmaI	CCCGGG	1 cut(s)	241
XmiI	GTMKAC	2 cut(s)	108, 153
XspI	CTAG	1 cut(s)	1004
ZraI	GACGTC	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.