Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006651

Physical Location & Seq

Genomic Coordinates Forward (+)

17456987 .. 17465195

Gene Structure 8209 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G47550.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGGCGAAATCAAGCGCCGACGATGAAGAGCTTCGGCGAGCTTGCGAGGCCGCGATCGAAGGAACCAAGCAATCGATCGTTATGTCGATACGTGTCGCCAAGAGTCGCGGTGTTTGGGGCAAGTCTGGAAAATTGGGTCGACAAATGGCTAAACCCAGAGTTCTCGCTCTTTCCGTCAAATCAAAGGGTCCACGAAAGAAAGCATTTCTTCGAGTCATGAAGTATTCAAGTGGAGGAGTTCTGGAGCCTGCAAAAATGTATAAACTCAAGCATCTGTCAAAGGTGGAAGTCATAACTAATGACCCAAGTGGATGCACTTTCACACTGGGGTTTGATAATCTCAGGAGTCAAAGTGTTGCTCCTCCACAGTGGACCATGCGCAACACTGATGACAGGAACCGACTTTTAGTTTGCATATTGAACATATGCAAAGACGTATTAGGCCGCCTTCCAAAAGTTGTTGGTATAGATATTGTCGAGATGGCCCTTTGGGCAAAGGATAACACTCCAGTAGTCACTACTCAAAGAAGTACAGAAGATGGGGAGCCTGTTGCTGAATCTGTAACAGAAAGCGACTTGAAAGTTACTGTTGAGAAAGAACTAGTCTCTCAGGCCGAGGAAGAGGATATGGAGGCTCTGTTGGGAACTTATGTAATGGGCATTGGTGAAGCTGAGGCATTTTCTGAAAGGCTGAAGCGAGAGCTCCAAGCGCTTGAAGCGGCAAATGTACATGCAATTCTTGAAAGCGAACCATTAGTAGATGAGGTTTTGAATGGACTAGAGGCAGCAACAAATATCGTTGATGACATGGATGAATGGTTAGGAATATTCAACATTAAACTTAGACACATGAGGGAAGACATTGAATCGATAGAAACTCGAAACAACAAGTTAGAGATGCAGTCTGTAAACAATAAAGCTCTCATTGAGGAACTTGATAAAGTTATTGAGAGACTGCGTGTGCCTTCTGAGTATGCAGCATCCCTAACAGGAGGCTCATTTGATGAAGCAGACATGCTCCAGAATATTGAGGCTTGCGAGTGGTTAGCCAAAGCTTTAAGGGGTCTTGAAGTGCCCAACTTAGACCCGATCTATGCTAATATGCGAGCTGTAAAAGAGAAACGAGCAGAACTAGAAAAATTAAAAGCTACTTTTGTAAGGAGAGCTTCGGAGTTCTTGAGAAACTACTTTGCTAGTTTGGTAGATTTCATGGTCAGCGACAAAAGCTACTTTTCTCAGAGAGGGCAGCTGAAGAGGCCTGACCATGCTGATTTGCGGTACAAATGCAGAACATATGCTCGTCTTTTGCAACATTTAAAGGGTCTTGATAAGAATTGTTTGGGACCATTGAGAAAAGCATACTGCAGCTCCCTGAACTTGCTCCTTCGTCGAGAGGCTCGTGAATTCGCGAATGAGCTTCGTGCAAGCACAAAAGTATCACGAAATCCTACTGTCTGGCTAGAAGGATCTACGGGTTCTAGTCAGAATGCAAACACTGACACCTCTGCAGTGTCAGATGCTTATGCCAAGATGCTAACAATATTCATCCCGCTTCTTGTAGATGAGAGTTCCTTTTTTGCGCACTTCATGTGCTTTGAGGTACCTGCTCTTGCTCCTCCTGGAGGTGCTGGCAATGATAAGAAAAGCCAGTCCAACAATGACGATGGTAATGATGATGATGATTTGGGGATCATGGACATTGATGAAACTGACAAGAAACCTGGTAAAAACTCTCCAGACCTGACGGCATTGAATGAGTCTCTTCAAGATTTACTTGATGGTATTCAGGAGGATTTCTATGCTGTTGTTGACTGGGCATATAAAATAGACCCCCTACGGTGTATTTCAATGCATGGTATAACTGAACGTTATCTATCTGGTCAGAAAGCTGATGCTGCAGGATTTGTTCGCCTTTTGCTTGGAGATCTGGAGTCGAGAGTTTCTATGCAATTCAGCCGTTTTGTGGATGAAGCTTGTCACCAAATTGAAAGAAATGAACGTAATGTAAGACAGATGGGTGTCTTGCCATATATTCCAAGATTTGCAGCACTTGCTACTCGTATGGAACAATACATACAAGGGCAATCTAGAGATTTGGTTGATCAGGCATACACAAAATTTGTGAGCATAATGTTTGTGACCCTCGAGAAAATTGCCCAACAAGATCCTAAATATGCAGATATTCTCCTGTTAGAAAACTATGCTGCTTTTCAGAATAGCCTGTATGACCTGGCTAATGTTGTGCCGACTTTAGCCAAGTTTTATCACCAGGCAAGTGAAGCATATGAACAAGCTTGTACGCGCCACATTAGCATGATAATTTACTATCAATTCGAAAGACTTTTCCAGTTTGCTAAAAAGATTGAGGATTTCATGTATACTATCACCCCTGAAGAGATACCATTCCAGCTTGGTTTATCGAAAGTAGAACTCCGGAAGATGTTAAAATCAAGCCTGTCAGGGGTGGACAAATCGATTGCAGCAATGTATAAAAAGTTGCAGAAGAATCTAGCATCAGAGGAGTTGCTACCATCGTTGTGGGATAAATGCAAGAAGGAGTTTCTGGACAAGTACGAGAGCTTCGTGCAGCTCGTAGCCAAAGTTTATCCGAGTGAAAACGTTCCTGGAGTAACTGAAATGAGAGGACTTCTGGCTTCCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005546 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006810 GO:0006887 GO:0006892 GO:0006893 GO:0007154 GO:0008037 GO:0008104 GO:0008150 GO:0008289 GO:0009856 GO:0009875 GO:0009987 GO:0016020 GO:0016192 GO:0017016 GO:0017048 GO:0017049 GO:0019899 GO:0022414 GO:0031267 GO:0031503 GO:0031982 GO:0032501 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034629 GO:0035091 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048193 GO:0048544 GO:0051020 GO:0051179 GO:0051234 GO:0051601 GO:0051641 GO:0051704 GO:0060321 GO:0070062 GO:0070727 GO:0071944 GO:0098876 GO:0099023 GO:0099568 GO:1901981 GO:1902936 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec3-PIP2_bind Sec3_C

Protein Analysis

887

Amino Acids

100.06

Weight (kDa)

5.57

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec3-PIP2_bind	PF15277	49 - 144	4.5e-17	Exocyst complex component SEC3 N-terminal PIP2 binding PH
Sec3_CC	PF09763	224 - 353	1.6e-27	Exocyst complex component Sec3, coiled-coil
Vps52_CC	PF04129	253 - 394	1.2e-10	Vps52/Sac2 family, coiled-coil
Sec3_C-term	PF20654	582 - 871	3.7e-27	Exocyst complex component Sec3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47550 AT1G47550 AT1G47560
fragaria_vesca	FvH4_2g40450 FvH4_2g40450 FvH4_2g40450 FvH4_2g40450
malus_domestica	MD00G1038900.v1.1 MD08G1038000.v1.1
prunus_persica	Prupe.1G385700_v2.0.a1 Prupe.1G385700_v2.0.a1 Prupe.1G385700_v2.0.a1 Prupe.1G385700_v2.0.a1
pyrus_communis	pycom08g03010 pycom15g02940
rosa_chinensis	RchiOBHm_Chr6g0300281
rosa_laevigata	RLG00000011351
rosa_multiflora	Rmu_co8431689.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167930
rosa_rugosa	Rorug06G0294700
rosa_samantha	Rh6AG407200 Rh6BG414800 Rh6CG422100 Rh6DG407800 Rh7BG034300
rosa_wichuraiana	Rw6G035610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	380, 1581
Acc36I	ACCTGC	1 cut(s)	1612
Acc65I	GGTACC	1 cut(s)	1600
AccB1I	GGYRCC	1 cut(s)	1600
AccI	GTMKAC	2 cut(s)	139, 2378
AccII	CGCG	4 cut(s)	53, 108, 1409, 2302
AccIII	TCCGGA	1 cut(s)	2433
AciI	CCGC	6 cut(s)	51, 108, 445, 719, 1276, 1550
AclI	AACGTT	2 cut(s)	1867, 2619
AclWI	GGATC	3 cut(s)	1474, 1697, 2159
AcsI	RAATTY	2 cut(s)	1403, 2117
AcuI	CTGAAG	3 cut(s)	713, 1271, 2412
AfaI	GTAC	6 cut(s)	532, 729, 1280, 1602, 2299, 2573
AfeI	AGCGCT	1 cut(s)	711
AfiI	CCNNNNNNNGG	3 cut(s)	1622, 1963, 2461
AflIII	ACRYGT	1 cut(s)	91
AhlI	ACTAGT	1 cut(s)	601
AjnI	CCWGG	5 cut(s)	1618, 1720, 2229, 2268, 2623
Alw21I	GWGCWC	1 cut(s)	705
Alw26I	GTCTC	3 cut(s)	610, 946, 1764
AlwI	GGATC	3 cut(s)	1474, 1697, 2159
Ama87I	CYCGRG	1 cut(s)	2144
Aor13HI	TCCGGA	1 cut(s)	2433
Aor51HI	AGCGCT	1 cut(s)	711
AoxI	GGCC	5 cut(s)	48, 442, 483, 612, 1256
ApeKI	GCWGC	9 cut(s)	785, 977, 1246, 1365, 1895, 2045, 2204, 2480, 2587
ApoI	RAATTY	2 cut(s)	1403, 2117
ArsI	GACNNNNNNTTYG	2 cut(s)	393, 425
Asp700I	GAANNNNTTC	2 cut(s)	30, 2619
Asp718I	GGTACC	1 cut(s)	1600
AspLEI	GCGC	5 cut(s)	17, 381, 712, 1582, 2304
AspS9I	GGNCC	4 cut(s)	188, 372, 484, 1343
AsuHPI	GGTGA	4 cut(s)	677, 1970, 2258, 2377
AsuII	TTCGAA	1 cut(s)	2334
AvaI	CYCGRG	1 cut(s)	2144
AvaII	GGWCC	3 cut(s)	188, 372, 1343
BaeGI	GKGCMC	1 cut(s)	1077
BaeI	ACNNNNGTAYC	2 cut(s)	1419, 1452
BanI	GGYRCC	1 cut(s)	1600
BanII	GRGCYC	1 cut(s)	705
BarI	GAAGNNNNNNTAC	2 cut(s)	2564, 2596
BauI	CACGAG	1 cut(s)	1398
BbsI	GAAGAC	1 cut(s)	864
Bbv12I	GWGCWC	1 cut(s)	705
BbvCI	CCTCAGC	1 cut(s)	672
BbvI	GCAGC	9 cut(s)	797, 989, 1258, 1377, 1882, 2057, 2191, 2492, 2599
BccI	CCATC	6 cut(s)	475, 533, 1658, 1772, 2008, 2539
BceAI	ACGGC	2 cut(s)	1761, 1941
BcgI	CGANNNNNNTGC	2 cut(s)	2135, 2169
BciT130I	CCWGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
BclI	TGATCA	1 cut(s)	2101
BcoDI	GTCTC	3 cut(s)	610, 946, 1764
BcuI	ACTAGT	1 cut(s)	601
BfaI	CTAG	8 cut(s)	602, 779, 1133, 1194, 1460, 1479, 2088, 2510
BfmI	CTRYAG	3 cut(s)	1363, 1506, 1896
BfoI	RGCGCY	2 cut(s)	18, 713
BfuAI	ACCTGC	1 cut(s)	1612
BglI	GCCNNNNNGGC	1 cut(s)	491
BglII	AGATCT	1 cut(s)	1924
Bme1390I	CCNGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
Bme18I	GGWCC	3 cut(s)	188, 372, 1343
BmeT110I	CYCGRG	1 cut(s)	2144
BmgT120I	GGNCC	4 cut(s)	188, 372, 484, 1343
BmiI	GGNNCC	7 cut(s)	64, 189, 246, 398, 546, 1344, 1602
BmrFI	CCNGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
BmrI	ACTGGG	2 cut(s)	335, 1822
BmsI	GCATC	8 cut(s)	280, 302, 888, 989, 1507, 1521, 1882, 2522
BmuI	ACTGGG	2 cut(s)	335, 1822
BpiI	GAAGAC	1 cut(s)	864
BpmI	CTGGAG	7 cut(s)	263, 492, 1004, 1641, 1719, 1949, 2646
Bpu10I	CCTNAGC	1 cut(s)	672
Bpu14I	TTCGAA	1 cut(s)	2334
BpuEI	CTTGAG	2 cut(s)	251, 1198
Bsa29I	ATCGAT	3 cut(s)	74, 869, 2474
BsaAI	YACGTR	1 cut(s)	92
BsaJI	CCNNGG	1 cut(s)	615
BsaWI	WCCGGW	1 cut(s)	2433
BsaXI	ACNNNNNCTCC	6 cut(s)	337, 367, 623, 653, 1352, 1382
Bsc4I	CCNNNNNNNGG	3 cut(s)	1622, 1963, 2461
Bse1I	ACTGG	5 cut(s)	330, 509, 1648, 1817, 2347
Bse3DI	GCAATG	2 cut(s)	1639, 2490
BseAI	TCCGGA	1 cut(s)	2433
BseBI	CCWGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
BseCI	ATCGAT	3 cut(s)	74, 869, 2474
BseDI	CCNNGG	1 cut(s)	615
BseGI	GGATG	5 cut(s)	317, 817, 980, 1545, 1972
BseLI	CCNNNNNNNGG	3 cut(s)	1622, 1963, 2461
BseMI	GCAATG	2 cut(s)	1639, 2490
BseMII	CTCAG	5 cut(s)	355, 623, 663, 960, 1250
BseNI	ACTGG	5 cut(s)	330, 509, 1648, 1817, 2347
BseRI	GAGGAG	4 cut(s)	249, 351, 1605, 2534
BseSI	GKGCMC	1 cut(s)	1077
BseXI	GCAGC	9 cut(s)	797, 989, 1258, 1377, 1882, 2057, 2191, 2492, 2599
BsgI	GTGCAG	1 cut(s)	2606
Bsh1236I	CGCG	4 cut(s)	53, 108, 1409, 2302
Bsh1285I	CGRYCG	2 cut(s)	57, 78
BshFI	GGCC	5 cut(s)	50, 444, 485, 614, 1258
BshNI	GGYRCC	1 cut(s)	1600
BshVI	ATCGAT	3 cut(s)	74, 869, 2474
BsiEI	CGRYCG	2 cut(s)	57, 78
BsiHKAI	GWGCWC	1 cut(s)	705
BsiHKCI	CYCGRG	1 cut(s)	2144
BsiSI	CCGG	1 cut(s)	2434
BslFI	GGGAC	1 cut(s)	1356
BslI	CCNNNNNNNGG	3 cut(s)	1622, 1963, 2461
BsmAI	GTCTC	3 cut(s)	610, 946, 1764
BsmFI	GGGAC	1 cut(s)	1356
BsmI	GAATGC	1 cut(s)	1492
BsnI	GGCC	5 cut(s)	50, 444, 485, 614, 1258
BsoBI	CYCGRG	1 cut(s)	2144
Bsp119I	TTCGAA	1 cut(s)	2334
Bsp1286I	GDGCHC	2 cut(s)	705, 1077
Bsp13I	TCCGGA	1 cut(s)	2433
Bsp1407I	TGTACA	1 cut(s)	727
Bsp143I	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
Bsp68I	TCGCGA	1 cut(s)	1409
BspACI	CCGC	6 cut(s)	51, 108, 445, 719, 1276, 1550
BspANI	GGCC	5 cut(s)	50, 444, 485, 614, 1258
BspCNI	CTCAG	5 cut(s)	354, 622, 664, 961, 1249
BspDI	ATCGAT	3 cut(s)	74, 869, 2474
BspEI	TCCGGA	1 cut(s)	2433
BspFNI	CGCG	4 cut(s)	53, 108, 1409, 2302
BspHI	TCATGA	1 cut(s)	216
BspLI	GGNNCC	7 cut(s)	64, 189, 246, 398, 546, 1344, 1602
BspMAI	CTGCAG	3 cut(s)	1367, 1510, 1900
BspMI	ACCTGC	1 cut(s)	1612
BspPI	GGATC	3 cut(s)	1474, 1697, 2159
BspQI	GCTCTTC	1 cut(s)	21
BspT104I	TTCGAA	1 cut(s)	2334
BspT107I	GGYRCC	1 cut(s)	1600
BsrDI	GCAATG	2 cut(s)	1639, 2490
BsrGI	TGTACA	1 cut(s)	727
BsrI	ACTGG	5 cut(s)	330, 509, 1648, 1817, 2347
BssECI	CCNNGG	1 cut(s)	615
BssMI	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
BssNAI	GTATAC	1 cut(s)	2379
BssSI	CACGAG	1 cut(s)	1398
Bst1107I	GTATAC	1 cut(s)	2379
Bst2BI	CACGAG	1 cut(s)	1398
Bst2UI	CCWGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
Bst4CI	ACNGT	4 cut(s)	369, 589, 1453, 1839
Bst6I	CTCTTC	5 cut(s)	21, 615, 1247, 1767, 2388
BstAPI	GCANNNNNTGC	1 cut(s)	2051
BstAUI	TGTACA	1 cut(s)	727
BstBAI	YACGTR	1 cut(s)	92
BstBI	TTCGAA	1 cut(s)	2334
BstC8I	GCNNGC	7 cut(s)	39, 43, 249, 1036, 1107, 1426, 1630
BstDEI	CTNAG	7 cut(s)	341, 609, 672, 842, 969, 1081, 1236
BstENI	CCTNNNNNAGG	1 cut(s)	1620
BstF5I	GGATG	5 cut(s)	317, 817, 980, 1545, 1972
BstFNI	CGCG	4 cut(s)	53, 108, 1409, 2302
BstH2I	RGCGCY	2 cut(s)	18, 713
BstHHI	GCGC	5 cut(s)	17, 381, 712, 1582, 2304
BstKTI	GATC	8 cut(s)	57, 78, 1092, 1469, 1692, 1927, 2104, 2167
BstMAI	GTCTC	3 cut(s)	610, 946, 1764
BstMBI	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
BstMCI	CGRYCG	2 cut(s)	57, 78
BstNI	CCWGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
BstNSI	RCATGY	2 cut(s)	734, 1018
BstSCI	CCNGG	5 cut(s)	1618, 1720, 2229, 2268, 2623
BstSFI	CTRYAG	3 cut(s)	1363, 1506, 1896
BstSLI	GKGCMC	1 cut(s)	1077
BstUI	CGCG	4 cut(s)	53, 108, 1409, 2302
BstV1I	GCAGC	9 cut(s)	797, 989, 1258, 1377, 1882, 2057, 2191, 2492, 2599
BstV2I	GAAGAC	1 cut(s)	864
BstX2I	RGATCY	3 cut(s)	1466, 1924, 2164
BstXI	CCANNNNNNTGG	1 cut(s)	2538
BstYI	RGATCY	3 cut(s)	1466, 1924, 2164
BstZ17I	GTATAC	1 cut(s)	2379
Bsu15I	ATCGAT	3 cut(s)	74, 869, 2474
BsuRI	GGCC	5 cut(s)	50, 444, 485, 614, 1258
BsuTUI	ATCGAT	3 cut(s)	74, 869, 2474
BtsCI	GGATG	5 cut(s)	317, 817, 980, 1545, 1972
BtsI	GCAGTG	1 cut(s)	1515
BtsIMutI	CAGTG	5 cut(s)	323, 374, 384, 1494, 1515
BtuMI	TCGCGA	1 cut(s)	1409
BveI	ACCTGC	1 cut(s)	1612
Cac8I	GCNNGC	7 cut(s)	39, 43, 249, 1036, 1107, 1426, 1630
CciI	TCATGA	1 cut(s)	216
CfoI	GCGC	5 cut(s)	17, 381, 712, 1582, 2304
Cfr13I	GGNCC	4 cut(s)	188, 372, 484, 1343
ClaI	ATCGAT	3 cut(s)	74, 869, 2474
CsiI	ACCWGGT	1 cut(s)	1720
Csp6I	GTAC	6 cut(s)	531, 728, 1279, 1601, 2298, 2572
CviQI	GTAC	6 cut(s)	531, 728, 1279, 1601, 2298, 2572
DdeI	CTNAG	7 cut(s)	341, 609, 672, 842, 969, 1081, 1236
DpnI	GATC	8 cut(s)	56, 77, 1091, 1468, 1691, 1926, 2103, 2166
DpnII	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
DraI	TTTAAA	1 cut(s)	1317
Eam1104I	CTCTTC	5 cut(s)	21, 615, 1247, 1767, 2388
EarI	CTCTTC	5 cut(s)	21, 615, 1247, 1767, 2388
Ecl136II	GAGCTC	1 cut(s)	703
Eco147I	AGGCCT	1 cut(s)	1258
Eco24I	GRGCYC	1 cut(s)	705
Eco47I	GGWCC	3 cut(s)	188, 372, 1343
Eco47III	AGCGCT	1 cut(s)	711
Eco53kI	GAGCTC	1 cut(s)	703
Eco57I	CTGAAG	3 cut(s)	713, 1271, 2412
Eco88I	CYCGRG	1 cut(s)	2144
EcoICRI	GAGCTC	1 cut(s)	703
EcoNI	CCTNNNNNAGG	1 cut(s)	1620
EcoRI	GAATTC	1 cut(s)	1403
EcoRII	CCWGG	5 cut(s)	1618, 1720, 2229, 2268, 2623
EcoT22I	ATGCAT	1 cut(s)	1854
EcoT38I	GRGCYC	1 cut(s)	705
FalI	AAGNNNNNCTT	6 cut(s)	192, 224, 1150, 1182, 1758, 1790
FaqI	GGGAC	1 cut(s)	1356
FauI	CCCGC	1 cut(s)	1557
FauNDI	CATATG	3 cut(s)	425, 1294, 2284
FbaI	TGATCA	1 cut(s)	2101
FblI	GTMKAC	2 cut(s)	139, 2378
FokI	GGATG	5 cut(s)	324, 824, 967, 1532, 1979
FriOI	GRGCYC	1 cut(s)	705
FspBI	CTAG	8 cut(s)	602, 779, 1133, 1194, 1460, 1479, 2088, 2510
FspI	TGCGCA	2 cut(s)	380, 1581
GlaI	GCGC	5 cut(s)	16, 380, 711, 1581, 2303
GsuI	CTGGAG	7 cut(s)	263, 492, 1004, 1641, 1719, 1949, 2646
HaeII	RGCGCY	2 cut(s)	18, 713
HaeIII	GGCC	5 cut(s)	50, 444, 485, 614, 1258
HapII	CCGG	1 cut(s)	2434
HhaI	GCGC	5 cut(s)	17, 381, 712, 1582, 2304
Hin6I	GCGC	5 cut(s)	15, 379, 710, 1580, 2302
HinP1I	GCGC	5 cut(s)	15, 379, 710, 1580, 2302
HincII	GTYRAC	2 cut(s)	140, 1810
HindII	GTYRAC	2 cut(s)	140, 1810
HindIII	AAGCTT	3 cut(s)	1053, 1971, 2292
HinfI	GANTC	8 cut(s)	103, 213, 346, 557, 866, 1757, 1931, 2506
HpaII	CCGG	1 cut(s)	2434
HphI	GGTGA	4 cut(s)	677, 1970, 2258, 2377
Hpy166II	GTNNAC	7 cut(s)	140, 191, 372, 910, 1810, 2379, 2467
Hpy8I	GTNNAC	7 cut(s)	140, 191, 372, 910, 1810, 2379, 2467
Hpy99I	CGWCG	2 cut(s)	23, 1392
HpyAV	CCTTC	6 cut(s)	53, 458, 975, 1394, 1457, 2548
HpyCH4III	ACNGT	4 cut(s)	369, 589, 1453, 1839
HpyCH4IV	ACGT	5 cut(s)	91, 435, 1867, 1999, 2619
HpyF3I	CTNAG	7 cut(s)	341, 609, 672, 842, 969, 1081, 1236
HpySE526I	ACGT	5 cut(s)	91, 435, 1867, 1999, 2619
HspAI	GCGC	5 cut(s)	15, 379, 710, 1580, 2302
Kpn2I	TCCGGA	1 cut(s)	2433
KpnI	GGTACC	1 cut(s)	1604
Ksp22I	TGATCA	1 cut(s)	2101
Kzo9I	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
LguI	GCTCTTC	1 cut(s)	21
LmnI	GCTCC	8 cut(s)	244, 364, 544, 708, 1023, 1373, 1386, 1618
Lsp1109I	GCAGC	9 cut(s)	797, 989, 1258, 1377, 1882, 2057, 2191, 2492, 2599
LweI	GCATC	8 cut(s)	280, 302, 888, 989, 1507, 1521, 1882, 2522
MabI	ACCWGGT	1 cut(s)	1720
MaeI	CTAG	8 cut(s)	602, 779, 1133, 1194, 1460, 1479, 2088, 2510
MaeII	ACGT	5 cut(s)	91, 435, 1867, 1999, 2619
MaeIII	GTNAC	6 cut(s)	514, 562, 583, 1976, 2137, 2629
MalI	GATC	8 cut(s)	56, 77, 1091, 1468, 1691, 1926, 2103, 2166
MboI	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
MflI	RGATCY	3 cut(s)	1466, 1924, 2164
MhlI	GDGCHC	2 cut(s)	705, 1077
MlyI	GAGTC	5 cut(s)	112, 222, 355, 1766, 1940
MmeI	TCCRAC	1 cut(s)	1677
Mph1103I	ATGCAT	1 cut(s)	1854
MroI	TCCGGA	1 cut(s)	2433
MroXI	GAANNNNTTC	2 cut(s)	30, 2619
MseI	TTAA	5 cut(s)	837, 1058, 1142, 1316, 2444
MslI	CAYNNNNRTG	2 cut(s)	2312, 2536
MspA1I	CMGCKG	1 cut(s)	1249
MspI	CCGG	1 cut(s)	2434
MspR9I	CCNGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
Mva1269I	GAATGC	1 cut(s)	1492
MvaI	CCWGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
MvnI	CGCG	4 cut(s)	53, 108, 1409, 2302
NdeI	CATATG	3 cut(s)	425, 1294, 2284
NdeII	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
NlaIV	GGNNCC	7 cut(s)	64, 189, 246, 398, 546, 1344, 1602
NmeAIII	GCCGAG	1 cut(s)	640
NmuCI	GTSAC	3 cut(s)	514, 1976, 2137
NruI	TCGCGA	1 cut(s)	1409
NsbI	TGCGCA	2 cut(s)	380, 1581
NsiI	ATGCAT	1 cut(s)	1854
NspI	RCATGY	2 cut(s)	734, 1018
NspV	TTCGAA	1 cut(s)	2334
PaeR7I	CTCGAG	1 cut(s)	2144
PagI	TCATGA	1 cut(s)	216
PceI	AGGCCT	1 cut(s)	1258
PciSI	GCTCTTC	1 cut(s)	21
PcsI	WCGNNNNNNNCGW	4 cut(s)	171, 1396, 2580, 2589
PctI	GAATGC	1 cut(s)	1492
PdmI	GAANNNNTTC	2 cut(s)	30, 2619
PfeI	GAWTC	3 cut(s)	557, 866, 2506
PfoI	TCCNGGA	2 cut(s)	1618, 2623
Ple19I	CGATCG	2 cut(s)	57, 78
PleI	GAGTC	5 cut(s)	111, 221, 354, 1765, 1939
PpsI	GAGTC	5 cut(s)	111, 221, 354, 1765, 1939
Ppu21I	YACGTR	1 cut(s)	92
Psp124BI	GAGCTC	1 cut(s)	705
Psp1406I	AACGTT	2 cut(s)	1867, 2619
Psp6I	CCWGG	5 cut(s)	1618, 1720, 2229, 2268, 2623
PspGI	CCWGG	5 cut(s)	1618, 1720, 2229, 2268, 2623
PspN4I	GGNNCC	7 cut(s)	64, 189, 246, 398, 546, 1344, 1602
PspPI	GGNCC	4 cut(s)	188, 372, 484, 1343
PsrI	GAACNNNNNNTAC	2 cut(s)	2058, 2090
PstI	CTGCAG	3 cut(s)	1367, 1510, 1900
PsuI	RGATCY	3 cut(s)	1466, 1924, 2164
PvuI	CGATCG	2 cut(s)	57, 78
PvuII	CAGCTG	1 cut(s)	1249
RruI	TCGCGA	1 cut(s)	1409
RsaI	GTAC	6 cut(s)	532, 729, 1280, 1602, 2299, 2573
RsaNI	GTAC	6 cut(s)	531, 728, 1279, 1601, 2298, 2572
RseI	CAYNNNNRTG	2 cut(s)	2312, 2536
SacI	GAGCTC	1 cut(s)	705
SalI	GTCGAC	1 cut(s)	138
SapI	GCTCTTC	1 cut(s)	21
SaqAI	TTAA	5 cut(s)	837, 1058, 1142, 1316, 2444
Sau3AI	GATC	8 cut(s)	54, 75, 1089, 1466, 1689, 1924, 2101, 2164
Sau96I	GGNCC	4 cut(s)	188, 372, 484, 1343
SchI	GAGTC	5 cut(s)	112, 222, 355, 1766, 1940
ScrFI	CCNGG	5 cut(s)	1620, 1722, 2231, 2270, 2625
SduI	GDGCHC	2 cut(s)	705, 1077
SexAI	ACCWGGT	1 cut(s)	1720
SfaNI	GCATC	8 cut(s)	280, 302, 888, 989, 1507, 1521, 1882, 2522
SfcI	CTRYAG	3 cut(s)	1363, 1506, 1896
Sfr274I	CTCGAG	1 cut(s)	2144
SfuI	TTCGAA	1 cut(s)	2334
SinI	GGWCC	3 cut(s)	188, 372, 1343
SlaI	CTCGAG	1 cut(s)	2144
SmiMI	CAYNNNNRTG	2 cut(s)	2312, 2536
SmlI	CTYRAG	3 cut(s)	266, 1177, 2144
SmoI	CTYRAG	3 cut(s)	266, 1177, 2144
SpeI	ACTAGT	1 cut(s)	601
SseBI	AGGCCT	1 cut(s)	1258
SsiI	CCGC	6 cut(s)	51, 108, 445, 719, 1276, 1550
SspI	AATATT	3 cut(s)	828, 1027, 1542
SspMI	CTAG	8 cut(s)	602, 779, 1133, 1194, 1460, 1479, 2088, 2510
SstI	GAGCTC	1 cut(s)	705
StuI	AGGCCT	1 cut(s)	1258
StyD4I	CCNGG	5 cut(s)	1618, 1720, 2229, 2268, 2623
TaaI	ACNGT	4 cut(s)	369, 589, 1453, 1839
TaiI	ACGT	5 cut(s)	94, 438, 1870, 2002, 2622
TatI	WGTACW	2 cut(s)	530, 727
TauI	GCSGC	3 cut(s)	53, 447, 722
TfiI	GAWTC	3 cut(s)	557, 866, 2506
Tru1I	TTAA	5 cut(s)	837, 1058, 1142, 1316, 2444
Tru9I	TTAA	5 cut(s)	837, 1058, 1142, 1316, 2444
TscAI	CASTG	5 cut(s)	330, 374, 391, 1501, 1515
TseFI	GTSAC	3 cut(s)	514, 1976, 2137
TseI	GCWGC	9 cut(s)	785, 977, 1246, 1365, 1895, 2045, 2204, 2480, 2587
Tsp45I	GTSAC	3 cut(s)	514, 1976, 2137
TspGWI	ACGGA	1 cut(s)	163
TspRI	CASTG	5 cut(s)	330, 374, 391, 1501, 1515
VpaK11BI	GGWCC	3 cut(s)	188, 372, 1343
XagI	CCTNNNNNAGG	1 cut(s)	1620
XapI	RAATTY	2 cut(s)	1403, 2117
XbaI	TCTAGA	1 cut(s)	2087
XceI	RCATGY	2 cut(s)	734, 1018
XhoI	CTCGAG	1 cut(s)	2144
XmiI	GTMKAC	2 cut(s)	139, 2378
XmnI	GAANNNNTTC	2 cut(s)	30, 2619
XspI	CTAG	8 cut(s)	602, 779, 1133, 1194, 1460, 1479, 2088, 2510
Zsp2I	ATGCAT	1 cut(s)	1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.