FvH4_2g40450

Exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0006651
Physical Location & Seq
Forward (+)
28796420 .. 28805769
9350 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40450.t2

Sequence Viewer

Length: 2661 bp
ATGGCGAAATCCAGCGCCGACGACCAGGAGCTCCGGCGAGCATGCGAGGCCGCAATCGAAGGCACCAAGCAGTCTGTCGTCATGTCGATCCGCGTCGCCAAGAGCCGAGGCATGTGGGGCAAAACTCACAAGCTCGGCCGCGACATGGCCAAACCTAGGGTTCTTGCCCTCTCCGTAAAAAACAAAGGCCAGCGAACTAAAGCCTTTCTTCGAGTCTTAAAATATTCCACTGGAGGAGTTCTTGAGCCTGCAAAGTTATACAAGCTAAAGCATCTTTCAAAGGTGGAGGTTTTAACAAACGACCCTAGTGGATGTACTTTTACTCTGGGTTTCGATAACCTTAGGAGCCAAAGTGTTGCTCCTCCTCAATGGACCATGCGAAATATTGATGACAGGAACCGCCTTTTATTGTGTATTTTAAACATATGCAAAGATGCACTGGAACAGCTCCCTAAAGTTGTTGGTATAGATGTTGTTGAGATGGCTCTTTGGGCTAAGGAAAATACACCAGCAGTTTCTAATCAAAACAACCAGCAAGAGGGACCTGCTGCATCAACAGTGACTGAACGTGAAATGAAAGTAACGGTTGAGAAAGAACTTGTCTCACAGGCTGAGGAAGAGGACATGGAGGCACTTTTGGGAACGTATGTAATGGGTATTGGTGAAGCAGAGGCATTTTCTGAAAGGTTGAAAAGAGAACTTCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTGGAAAGCGAACCTTTGATGGATGAGGTTTTGCAAGGGATTGAAGCAGCAACAAATTGTGTTGATGACATGGATGAATGGTTAGGCATCTTCAATGTGAAACTCAGACACATGAGAGAAGACATTGAATCGATAGAAACCCGCAATAACAAGTTGGAAACGCAATCTGTAAATAATAAAGCACTCATCGAGGAACTTGACAAGCTTCTTAAAGGCTTGCATATCCCTACAGAGTATTCAACATGTTTGACAGGAGGTTCATTTGACGAAGCACGTATGCTTCAAAACATAGAAGCATGTGAGTGGTTATCTGCTTCCCTACGCAGTCTTCAAGTACCCAATTTGGATCCTATCTATGCAAACATGCGAGCTGTCAAAGAGAAGCGAGCCGAACTTGAAATATTAAAAGCTACATTTGTAAGAAGAGCTTCTGAGTTCTTGCGAAATTACTTTGCTAGTTTGGTGGATTTCATGATAAGTGATAAGAGCTACTTTTCTCAGCGAGGGCAACTGAAAAGGCCTGATCATGCTGATCTTCGGTATAAATGCAGGACATATGCTCGCCTTCTGCAACATTTAAAGACACTTGATAAGAATTGCCTTGGTCCGCTGAGAAAAGCATATTGTAGCTCCCTCAACTTGCTTCTTCGTCGGGAGGCTCGTGAATTTGCAAATGAGCTTCGTGCTAGCACGAAGGCATCAAAAAATCAGACTGTCTGGCTTGAAGCTTCTGGTGGTTCTGGTCAAAATGTGAATGCTGCAGACACTTCTACTGTTTCTGAAGCTTATTCCAAGATGCTCACAATTTTTATCCCACTCCTTGTAGATGAGAGTTCTTTTTTTGCACACTTTATGTGCTTTGAAGTTCCTGCACTTGTTCCTCCAGGGGGTACTGCCAATGGAGATAAATCTGAATACAATGATGATGACCCCAATGATGACGATTTGGGAATCATGGACATTGACGACAATGACAGTAAAGCTGGTAAACAAACAGGAGAACTTGCAGCATTGAATGAATCTCTTCAGGATTTACTTGATGGAATCCAAGAAGACTTTTATGCTGTGGTGGACTGGGCATACAAGATTGATCCTTTACGCTGCATATCAATGCATGGGATTACAGAGCGTTATCTTTCTGGTCAGAAAGCTGATGCAGCAGGGTTTGTGCGTCTGCTGCTGGGTGATCTGGAGTCAAGAGTATCAATGCAGTTTAGTCGTTTTGTTGACGAAGCATGCCACCAGATTGAAAGAAATGAGCGCAATGTTAGGCAAATGGGTGTCTTATCATACATCCCAAGATTTGCAACTCTGGCAACACGAATGGAGCAGTATATCCAGGGACAATCTAGGGAGTTAGTTGATCAAGCATACACAAAATTTGTTAGCATAATGTTTGTGACTTTAGAGAAAATTGCACAAACAGATCCAAAATATTCTGACCTTTTCCTCTTAGAGAACTATGCTGCATTTCAGAATAGTTTGTATGACCTAGCAAATGTTGTTCCCACATTGGCCAAATTTTATCACCAAGCAAGTGAAGCTTATGAACAAGCTTGCACACGCCATATCAGTATGATCATATATGCTCAATTTGAGCGGCTTTTCCAGTTTGCTAAAAAAATAGAGGATTTGATGTATACAATCGCTCCAGAAGAGATCCCTTTCCAGCTTGGTTTGTCAAAGGTGGATTTGCGGAAGATGTTAAAATATAGTTTATCTGGGCTTGACAAGTCCATCAGTGCAATGTACAAGAAGTTGCAGAAAAACATGACATCAGAAGAATTGCTGCCTTCCTTGTGGGATAAATGCAAGAAGGAGTTTCTTGACAAGTATGAAAGTTTTGCTCAACTTGTCAACAAAATCTACCCCTCAGAGACCATTCCTACTGTAACAGAGATGAGAGAACTTTTGGCTTCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sec3-PIP2_bind Sec3_C

Protein Analysis

887

Amino Acids

100.33

Weight (kDa)

5.49

Isoelectric Point (pI)

47.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec3-PIP2_bind PF15277 50 - 144 2.6e-15 Exocyst complex component SEC3 N-terminal PIP2 binding PH
Sec3_CC PF09763 223 - 344 3.7e-27 Exocyst complex component Sec3, coiled-coil
Vps52_CC PF04129 255 - 392 2.3e-08 Vps52/Sac2 family, coiled-coil
Sec3_C-term PF20654 582 - 707 2.8e-10 Exocyst complex component Sec3, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 553
AccB1I GGYRCC 1 cut(s) 62
AccBSI CCGCTC 1 cut(s) 2335
AccI GTMKAC 1 cut(s) 2375
AccII CGCG 2 cut(s) 93, 141
AciI CCGC 8 cut(s) 51, 91, 139, 400, 877, 1343, 2335, 2431
AclWI GGATC 6 cut(s) 82, 1076, 1089, 1820, 2156, 2389
AcoI YGGCCR 3 cut(s) 136, 147, 2250
AcsI RAATTY 3 cut(s) 1400, 2114, 2255
AcuI CTGAAG 3 cut(s) 686, 1536, 1745
AfaI GTAC 4 cut(s) 316, 1071, 1627, 2486
AfiI CCNNNNNNNGG 4 cut(s) 145, 156, 538, 1622
AflIII ACRYGT 1 cut(s) 977
AjnI CCWGG 3 cut(s) 24, 1618, 2073
Alw21I GWGCWC 1 cut(s) 33
Alw26I GTCTC 2 cut(s) 607, 2606
AlwI GGATC 6 cut(s) 82, 1076, 1089, 1820, 2156, 2389
AlwNI CAGNNNCTG 2 cut(s) 563, 709
AoxI GGCC 6 cut(s) 48, 136, 147, 187, 1253, 2250
ApoI RAATTY 3 cut(s) 1400, 2114, 2255
Asp700I GAANNNNTTC 2 cut(s) 1162, 1758
AspA2I CCTAGG 1 cut(s) 155
AspLEI GCGC 2 cut(s) 17, 1998
AspS9I GGNCC 3 cut(s) 372, 542, 1340
AsuHPI GGTGA 3 cut(s) 674, 1931, 2255
AsuNHI GCTAGC 1 cut(s) 1421
AvaII GGWCC 3 cut(s) 372, 542, 1340
AvrII CCTAGG 1 cut(s) 155
AxyI CCTNAGG 1 cut(s) 341
BalI TGGCCA 2 cut(s) 149, 2252
BamHI GGATCC 1 cut(s) 1081
BanI GGYRCC 1 cut(s) 62
BanII GRGCYC 1 cut(s) 33
BauI CACGAG 1 cut(s) 1395
BbsI GAAGAC 3 cut(s) 861, 1055, 1794
Bbv12I GWGCWC 1 cut(s) 33
BbvCI CCTCAGC 1 cut(s) 612
BccI CCATC 4 cut(s) 475, 748, 1769, 2480
BcgI CGANNNNNNTGC 2 cut(s) 1934, 1968
BciT130I CCWGG 3 cut(s) 26, 1620, 2075
BclI TGATCA 3 cut(s) 1258, 2098, 2313
BcoDI GTCTC 2 cut(s) 607, 2606
BfaI CTAG 6 cut(s) 156, 306, 1191, 1422, 2085, 2228
BfmI CTRYAG 2 cut(s) 963, 1494
BfoI RGCGCY 1 cut(s) 18
BfuAI ACCTGC 1 cut(s) 553
BlnI CCTAGG 1 cut(s) 155
Bme1390I CCNGG 3 cut(s) 26, 1620, 2075
Bme18I GGWCC 3 cut(s) 372, 542, 1340
BmgT120I GGNCC 3 cut(s) 372, 542, 1340
BmiI GGNNCC 5 cut(s) 64, 347, 398, 543, 1083
BmrFI CCNGG 3 cut(s) 26, 1620, 2075
BmrI ACTGGG 1 cut(s) 1819
BmsI GCATC 7 cut(s) 280, 424, 560, 831, 1442, 1521, 1879
BmtI GCTAGC 1 cut(s) 1425
BmuI ACTGGG 1 cut(s) 1819
BpiI GAAGAC 3 cut(s) 861, 1055, 1794
BpmI CTGGAG 4 cut(s) 252, 1602, 1946, 2370
Bpu10I CCTNAGC 2 cut(s) 495, 612
BpuEI CTTGAG 1 cut(s) 263
Bsa29I ATCGAT 1 cut(s) 866
BsaAI YACGTR 1 cut(s) 1010
BsaI GGTCTC 1 cut(s) 2606
BsaJI CCNNGG 5 cut(s) 106, 155, 1336, 1619, 2074
BsaXI ACNNNNNCTCC 4 cut(s) 337, 367, 2368, 2398
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 156, 538, 1622
Bse1I ACTGG 4 cut(s) 235, 444, 1814, 2344
Bse21I CCTNAGG 1 cut(s) 341
Bse3DI GCAATG 2 cut(s) 2005, 2487
BseBI CCWGG 3 cut(s) 26, 1620, 2075
BseCI ATCGAT 1 cut(s) 866
BseDI CCNNGG 5 cut(s) 106, 155, 1336, 1619, 2074
BseGI GGATG 4 cut(s) 317, 763, 814, 2028
BseLI CCNNNNNNNGG 4 cut(s) 145, 156, 538, 1622
BseMI GCAATG 2 cut(s) 2005, 2487
BseMII CTCAG 6 cut(s) 603, 853, 1158, 1247, 1337, 2622
BseNI ACTGG 4 cut(s) 235, 444, 1814, 2344
BseRI GAGGAG 3 cut(s) 249, 351, 354
BseX3I CGGCCG 1 cut(s) 136
BseYI CCCAGC 1 cut(s) 1915
BsgI GTGCAG 1 cut(s) 1590
Bsh1236I CGCG 2 cut(s) 93, 141
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 6 cut(s) 50, 138, 149, 189, 1255, 2252
BshNI GGYRCC 1 cut(s) 62
BshVI ATCGAT 1 cut(s) 866
BsiEI CGRYCG 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 33
BsiSI CCGG 1 cut(s) 34
BslFI GGGAC 2 cut(s) 555, 2091
BslI CCNNNNNNNGG 4 cut(s) 145, 156, 538, 1622
BsmAI GTCTC 2 cut(s) 607, 2606
BsmFI GGGAC 2 cut(s) 555, 2091
BsmI GAATGC 1 cut(s) 1495
BsnI GGCC 6 cut(s) 50, 138, 149, 189, 1255, 2252
Bso31I GGTCTC 1 cut(s) 2606
Bsp1286I GDGCHC 1 cut(s) 33
Bsp1407I TGTACA 1 cut(s) 2484
BspACI CCGC 8 cut(s) 51, 91, 139, 400, 877, 1343, 2335, 2431
BspANI GGCC 6 cut(s) 50, 138, 149, 189, 1255, 2252
BspCNI CTCAG 6 cut(s) 604, 852, 1159, 1246, 1338, 2621
BspDI ATCGAT 1 cut(s) 866
BspFNI CGCG 2 cut(s) 93, 141
BspHI TCATGA 1 cut(s) 1206
BspLI GGNNCC 5 cut(s) 64, 347, 398, 543, 1083
BspMAI CTGCAG 1 cut(s) 1498
BspMI ACCTGC 1 cut(s) 553
BspOI GCTAGC 1 cut(s) 1425
BspPI GGATC 6 cut(s) 82, 1076, 1089, 1820, 2156, 2389
BspQI GCTCTTC 1 cut(s) 1153
BspT107I GGYRCC 1 cut(s) 62
BspTNI GGTCTC 1 cut(s) 2606
BsrBI CCGCTC 1 cut(s) 2335
BsrDI GCAATG 2 cut(s) 2005, 2487
BsrGI TGTACA 1 cut(s) 2484
BsrI ACTGG 4 cut(s) 235, 444, 1814, 2344
BssECI CCNNGG 5 cut(s) 106, 155, 1336, 1619, 2074
BssNAI GTATAC 1 cut(s) 2376
BssSI CACGAG 1 cut(s) 1395
BssT1I CCWWGG 2 cut(s) 155, 1336
Bst1107I GTATAC 1 cut(s) 2376
Bst2BI CACGAG 1 cut(s) 1395
Bst2UI CCWGG 3 cut(s) 26, 1620, 2075
Bst4CI ACNGT 6 cut(s) 559, 586, 1450, 1510, 1712, 2626
Bst6I CTCTTC 4 cut(s) 612, 1153, 1764, 2385
BstAUI TGTACA 1 cut(s) 2484
BstBAI YACGTR 1 cut(s) 1010
BstDEI CTNAG 9 cut(s) 341, 495, 612, 839, 1167, 1233, 1346, 2188, 2608
BstF5I GGATG 4 cut(s) 317, 763, 814, 2028
BstFNI CGCG 2 cut(s) 93, 141
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 2 cut(s) 17, 1998
BstMAI GTCTC 2 cut(s) 607, 2606
BstMCI CGRYCG 1 cut(s) 139
BstMWI GCNNNNNNNGC 8 cut(s) 47, 117, 491, 713, 1892, 1912, 2048, 2276
BstNI CCWGG 3 cut(s) 26, 1620, 2075
BstNSI RCATGY 7 cut(s) 45, 115, 731, 981, 1035, 1102, 1974
BstSCI CCNGG 3 cut(s) 24, 1618, 2073
BstSFI CTRYAG 2 cut(s) 963, 1494
BstUI CGCG 2 cut(s) 93, 141
BstV2I GAAGAC 3 cut(s) 861, 1055, 1794
BstX2I RGATCY 3 cut(s) 1081, 2161, 2394
BstYI RGATCY 3 cut(s) 1081, 2161, 2394
BstZ17I GTATAC 1 cut(s) 2376
BstZI CGGCCG 1 cut(s) 136
Bsu15I ATCGAT 1 cut(s) 866
Bsu36I CCTNAGG 1 cut(s) 341
BsuRI GGCC 6 cut(s) 50, 138, 149, 189, 1255, 2252
BsuTUI ATCGAT 1 cut(s) 866
BtsCI GGATG 4 cut(s) 317, 763, 814, 2028
BtsIMutI CAGTG 4 cut(s) 228, 437, 564, 2482
BveI ACCTGC 1 cut(s) 553
CaiI CAGNNNCTG 2 cut(s) 563, 709
CciI TCATGA 1 cut(s) 1206
CfoI GCGC 2 cut(s) 17, 1998
Cfr13I GGNCC 3 cut(s) 372, 542, 1340
ClaI ATCGAT 1 cut(s) 866
CseI GACGC 2 cut(s) 82, 1895
Csp6I GTAC 4 cut(s) 315, 1070, 1626, 2485
CviQI GTAC 4 cut(s) 315, 1070, 1626, 2485
DdeI CTNAG 9 cut(s) 341, 495, 612, 839, 1167, 1233, 1346, 2188, 2608
DraI TTTAAA 2 cut(s) 420, 1314
EaeI YGGCCR 3 cut(s) 136, 147, 2250
EagI CGGCCG 1 cut(s) 136
Eam1104I CTCTTC 4 cut(s) 612, 1153, 1764, 2385
EarI CTCTTC 4 cut(s) 612, 1153, 1764, 2385
Ecl136II GAGCTC 1 cut(s) 31
EclXI CGGCCG 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 155, 1336
Eco147I AGGCCT 1 cut(s) 1255
Eco24I GRGCYC 1 cut(s) 33
Eco31I GGTCTC 1 cut(s) 2606
Eco47I GGWCC 3 cut(s) 372, 542, 1340
Eco52I CGGCCG 1 cut(s) 136
Eco53kI GAGCTC 1 cut(s) 31
Eco57I CTGAAG 3 cut(s) 686, 1536, 1745
Eco81I CCTNAGG 1 cut(s) 341
EcoICRI GAGCTC 1 cut(s) 31
EcoO109I RGGNCCY 1 cut(s) 542
EcoRII CCWGG 3 cut(s) 24, 1618, 2073
EcoT14I CCWWGG 2 cut(s) 155, 1336
EcoT22I ATGCAT 1 cut(s) 1851
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 2 cut(s) 155, 1336
FaqI GGGAC 2 cut(s) 555, 2091
FauI CCCGC 1 cut(s) 884
FauNDI CATATG 2 cut(s) 425, 1291
FbaI TGATCA 3 cut(s) 1258, 2098, 2313
FblI GTMKAC 1 cut(s) 2375
FokI GGATG 4 cut(s) 324, 770, 821, 2015
FriOI GRGCYC 1 cut(s) 33
FspBI CTAG 6 cut(s) 156, 306, 1191, 1422, 2085, 2228
GlaI GCGC 2 cut(s) 16, 1997
GsaI CCCAGC 1 cut(s) 1919
GsuI CTGGAG 4 cut(s) 252, 1602, 1946, 2370
HaeII RGCGCY 1 cut(s) 18
HaeIII GGCC 6 cut(s) 50, 138, 149, 189, 1255, 2252
HapII CCGG 1 cut(s) 34
HgaI GACGC 2 cut(s) 82, 1895
HhaI GCGC 2 cut(s) 17, 1998
Hin6I GCGC 2 cut(s) 15, 1996
HinP1I GCGC 2 cut(s) 15, 1996
HincII GTYRAC 2 cut(s) 1963, 2593
HindII GTYRAC 2 cut(s) 1963, 2593
HindIII AAGCTT 5 cut(s) 938, 1461, 1518, 2277, 2289
HinfI GANTC 6 cut(s) 213, 863, 1686, 1754, 1779, 1928
HpaII CCGG 1 cut(s) 34
HphI GGTGA 3 cut(s) 674, 1931, 2255
Hpy166II GTNNAC 5 cut(s) 1724, 1807, 1963, 2376, 2593
Hpy8I GTNNAC 5 cut(s) 1724, 1807, 1963, 2376, 2593
Hpy99I CGWCG 3 cut(s) 23, 98, 1389
HpyAV CCTTC 5 cut(s) 53, 1310, 1423, 2538, 2545
HpyCH4III ACNGT 6 cut(s) 559, 586, 1450, 1510, 1712, 2626
HpyCH4IV ACGT 3 cut(s) 568, 644, 1009
HpyF10VI GCNNNNNNNGC 8 cut(s) 47, 117, 491, 713, 1892, 1912, 2048, 2276
HpyF3I CTNAG 9 cut(s) 341, 495, 612, 839, 1167, 1233, 1346, 2188, 2608
HpySE526I ACGT 3 cut(s) 568, 644, 1009
HspAI GCGC 2 cut(s) 15, 1996
Ksp22I TGATCA 3 cut(s) 1258, 2098, 2313
LguI GCTCTTC 1 cut(s) 1153
LmnI GCTCC 8 cut(s) 28, 36, 345, 364, 453, 1370, 2062, 2389
LweI GCATC 7 cut(s) 280, 424, 560, 831, 1442, 1521, 1879
MaeI CTAG 6 cut(s) 156, 306, 1191, 1422, 2085, 2228
MaeII ACGT 3 cut(s) 568, 644, 1009
MaeIII GTNAC 4 cut(s) 559, 580, 2134, 2626
MbiI CCGCTC 1 cut(s) 2335
MflI RGATCY 3 cut(s) 1081, 2161, 2394
MhlI GDGCHC 1 cut(s) 33
MlsI TGGCCA 2 cut(s) 149, 2252
MluNI TGGCCA 2 cut(s) 149, 2252
MlyI GAGTC 2 cut(s) 222, 1937
MmeI TCCRAC 1 cut(s) 870
Mox20I TGGCCA 2 cut(s) 149, 2252
Mph1103I ATGCAT 1 cut(s) 1851
MroXI GAANNNNTTC 2 cut(s) 1162, 1758
MscI TGGCCA 2 cut(s) 149, 2252
MseI TTAA 7 cut(s) 218, 293, 419, 945, 1139, 1313, 2441
MslI CAYNNNNRTG 2 cut(s) 1036, 1844
Msp20I TGGCCA 2 cut(s) 149, 2252
MspA1I CMGCKG 1 cut(s) 1345
MspI CCGG 1 cut(s) 34
MspR9I CCNGG 3 cut(s) 26, 1620, 2075
Mva1269I GAATGC 1 cut(s) 1495
MvaI CCWGG 3 cut(s) 26, 1620, 2075
MvnI CGCG 2 cut(s) 93, 141
MwoI GCNNNNNNNGC 8 cut(s) 47, 117, 491, 713, 1892, 1912, 2048, 2276
NdeI CATATG 2 cut(s) 425, 1291
NheI GCTAGC 1 cut(s) 1421
NlaIV GGNNCC 5 cut(s) 64, 347, 398, 543, 1083
NmeAIII GCCGAG 2 cut(s) 114, 131
NmuCI GTSAC 2 cut(s) 559, 2134
NsiI ATGCAT 1 cut(s) 1851
NspI RCATGY 7 cut(s) 45, 115, 731, 981, 1035, 1102, 1974
PaeI GCATGC 3 cut(s) 45, 731, 1974
PagI TCATGA 1 cut(s) 1206
PceI AGGCCT 1 cut(s) 1255
PciI ACATGT 1 cut(s) 977
PciSI GCTCTTC 1 cut(s) 1153
PcsI WCGNNNNNNNCGW 1 cut(s) 1393
PctI GAATGC 1 cut(s) 1495
PdmI GAANNNNTTC 2 cut(s) 1162, 1758
PfeI GAWTC 4 cut(s) 863, 1686, 1754, 1779
PleI GAGTC 2 cut(s) 221, 1936
PpsI GAGTC 2 cut(s) 221, 1936
Ppu21I YACGTR 1 cut(s) 1010
PpuMI RGGWCCY 1 cut(s) 542
PscI ACATGT 1 cut(s) 977
Psp124BI GAGCTC 1 cut(s) 33
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 3 cut(s) 24, 1618, 2073
PspFI CCCAGC 1 cut(s) 1915
PspGI CCWGG 3 cut(s) 24, 1618, 2073
PspN4I GGNNCC 5 cut(s) 64, 347, 398, 543, 1083
PspPI GGNCC 3 cut(s) 372, 542, 1340
PspPPI RGGWCCY 1 cut(s) 542
PstI CTGCAG 1 cut(s) 1498
PstNI CAGNNNCTG 2 cut(s) 563, 709
PsuI RGATCY 3 cut(s) 1081, 2161, 2394
RsaI GTAC 4 cut(s) 316, 1071, 1627, 2486
RsaNI GTAC 4 cut(s) 315, 1070, 1626, 2485
RseI CAYNNNNRTG 2 cut(s) 1036, 1844
SacI GAGCTC 1 cut(s) 33
SapI GCTCTTC 1 cut(s) 1153
SaqAI TTAA 7 cut(s) 218, 293, 419, 945, 1139, 1313, 2441
Sau96I GGNCC 3 cut(s) 372, 542, 1340
SchI GAGTC 2 cut(s) 222, 1937
ScrFI CCNGG 3 cut(s) 26, 1620, 2075
SduI GDGCHC 1 cut(s) 33
SfaNI GCATC 7 cut(s) 280, 424, 560, 831, 1442, 1521, 1879
SfcI CTRYAG 2 cut(s) 963, 1494
SinI GGWCC 3 cut(s) 372, 542, 1340
SmiMI CAYNNNNRTG 2 cut(s) 1036, 1844
SmlI CTYRAG 1 cut(s) 242
SmoI CTYRAG 1 cut(s) 242
SphI GCATGC 3 cut(s) 45, 731, 1974
SseBI AGGCCT 1 cut(s) 1255
SsiI CCGC 8 cut(s) 51, 91, 139, 400, 877, 1343, 2335, 2431
SspI AATATT 4 cut(s) 224, 385, 1137, 2171
SspMI CTAG 6 cut(s) 156, 306, 1191, 1422, 2085, 2228
SstI GAGCTC 1 cut(s) 33
StuI AGGCCT 1 cut(s) 1255
StyD4I CCNGG 3 cut(s) 24, 1618, 2073
StyI CCWWGG 2 cut(s) 155, 1336
TaaI ACNGT 6 cut(s) 559, 586, 1450, 1510, 1712, 2626
TaiI ACGT 3 cut(s) 571, 647, 1012
TaqI TCGA 6 cut(s) 57, 86, 211, 333, 866, 924
TatI WGTACW 2 cut(s) 314, 2484
TauI GCSGC 3 cut(s) 53, 141, 2338
TfiI GAWTC 4 cut(s) 863, 1686, 1754, 1779
Tru1I TTAA 7 cut(s) 218, 293, 419, 945, 1139, 1313, 2441
Tru9I TTAA 7 cut(s) 218, 293, 419, 945, 1139, 1313, 2441
TscAI CASTG 4 cut(s) 235, 444, 564, 2482
TseFI GTSAC 2 cut(s) 559, 2134
Tsp45I GTSAC 2 cut(s) 559, 2134
TspDTI ATGAA 7 cut(s) 590, 825, 984, 1195, 1767, 2298, 2586
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 4 cut(s) 235, 444, 564, 2482
VpaK11BI GGWCC 3 cut(s) 372, 542, 1340
XapI RAATTY 3 cut(s) 1400, 2114, 2255
XceI RCATGY 7 cut(s) 45, 115, 731, 981, 1035, 1102, 1974
XmaJI CCTAGG 1 cut(s) 155
XmiI GTMKAC 1 cut(s) 2375
XmnI GAANNNNTTC 2 cut(s) 1162, 1758
XspI CTAG 6 cut(s) 156, 306, 1191, 1422, 2085, 2228
Zsp2I ATGCAT 1 cut(s) 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.